View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15962_low_98 (Length: 285)
Name: NF15962_low_98
Description: NF15962
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15962_low_98 |
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Alignment Details
Target: chr5 (Bit Score: 248; Significance: 1e-138; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 248; E-Value: 1e-138
Query Start/End: Original strand, 1 - 268
Target Start/End: Complemental strand, 11903921 - 11903654
Alignment:
| Q |
1 |
cctattccatctcaagcatcctacaactcattagcaccctaaaacctatacctactcgtttatcaggaatagatcacatcaacaatcttgaaaatattct |
100 |
Q |
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| T |
11903921 |
cctattccatctcaagcatcctacaactcattagcaccctaaaacctatacctactcgtttatcaggaatagatcacatcaacaagcttgaagatattct |
11903822 |
T |
|
| Q |
101 |
caaagaaatcaatgacaaagtccagaaactgagctactcctccataggtgaaggacgtcttcttcctttgctgcaaaaggttagagacgtggtcatcgat |
200 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
11903821 |
caaagaaatcaatgacaaagtccagaaactgagctactcctccataggtgaagtacgtcttcttcctttgctgcaaaaggttagagacgtggtcatcgat |
11903722 |
T |
|
| Q |
201 |
ttaaatgactcgatggaggttctccgttacaacgagagtactactagtggctcaacaacagcgttcat |
268 |
Q |
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|||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |
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| T |
11903721 |
ttaaatgacttgatggaggttctccgttacaacgaaagtactactagtggctcaacaacagcgttcat |
11903654 |
T |
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