View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF15968_low_3 (Length: 512)

Name: NF15968_low_3
Description: NF15968
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF15968_low_3
NF15968_low_3
[»] chr7 (44 HSPs)
chr7 (180-425)||(49010175-49010420)
chr7 (194-419)||(43183964-43184188)
chr7 (194-419)||(3113616-3113840)
chr7 (194-419)||(5555911-5556135)
chr7 (194-419)||(33686010-33686234)
chr7 (188-419)||(14776594-14776825)
chr7 (194-419)||(8867227-8867451)
chr7 (194-419)||(40919517-40919741)
chr7 (255-419)||(7003172-7003336)
chr7 (255-419)||(7049043-7049207)
chr7 (424-512)||(49010017-49010105)
chr7 (255-417)||(11020585-11020747)
chr7 (255-417)||(34388636-34388798)
chr7 (194-419)||(36631265-36631488)
chr7 (194-395)||(38637878-38638078)
chr7 (256-420)||(20606071-20606235)
chr7 (194-419)||(8394574-8394797)
chr7 (194-419)||(26625193-26625416)
chr7 (263-421)||(13072424-13072582)
chr7 (241-420)||(20609364-20609542)
chr7 (122-181)||(29706877-29706936)
chr7 (263-420)||(20611853-20612010)
chr7 (194-362)||(37001736-37001903)
chr7 (194-419)||(36658626-36658839)
chr7 (191-420)||(23582414-23582642)
chr7 (326-415)||(45709965-45710054)
chr7 (126-180)||(29701543-29701597)
chr7 (180-271)||(8722827-8722917)
chr7 (19-88)||(29706715-29706781)
chr7 (324-417)||(32199136-32199229)
chr7 (331-419)||(33387046-33387134)
chr7 (221-425)||(12224506-12224705)
chr7 (118-180)||(31894257-31894319)
chr7 (118-187)||(44307603-44307672)
chr7 (191-291)||(31252295-31252394)
chr7 (358-425)||(8725240-8725307)
chr7 (118-180)||(31894539-31894601)
chr7 (118-179)||(1511190-1511251)
chr7 (337-417)||(21634432-21634512)
chr7 (323-403)||(28837412-28837491)
chr7 (122-185)||(1511475-1511538)
chr7 (122-181)||(10878623-10878682)
chr7 (122-184)||(28408529-28408591)
chr7 (366-418)||(6184159-6184211)
[»] chr8 (42 HSPs)
chr8 (191-419)||(9175581-9175808)
chr8 (194-419)||(42231384-42231608)
chr8 (194-419)||(3648288-3648512)
chr8 (194-419)||(9877667-9877891)
chr8 (194-419)||(378871-379094)
chr8 (194-419)||(2728689-2728913)
chr8 (194-419)||(16787521-16787745)
chr8 (202-419)||(34136305-34136521)
chr8 (255-419)||(4404455-4404619)
chr8 (188-419)||(39914963-39915194)
chr8 (255-409)||(7278480-7278634)
chr8 (192-419)||(19034-19262)
chr8 (194-419)||(23402555-23402779)
chr8 (255-419)||(29727938-29728100)
chr8 (276-419)||(40470118-40470261)
chr8 (193-417)||(40401001-40401224)
chr8 (182-421)||(29351807-29352045)
chr8 (193-420)||(32539972-32540185)
chr8 (122-182)||(14161495-14161555)
chr8 (194-386)||(3435726-3435917)
chr8 (337-419)||(15838734-15838816)
chr8 (256-417)||(35852495-35852656)
chr8 (126-180)||(14156163-14156217)
chr8 (255-397)||(32964064-32964206)
chr8 (224-417)||(15541743-15541935)
chr8 (19-88)||(14161331-14161397)
chr8 (328-394)||(36409020-36409086)
chr8 (180-395)||(29892039-29892250)
chr8 (118-187)||(20178363-20178432)
chr8 (118-187)||(20223091-20223160)
chr8 (221-350)||(33639154-33639282)
chr8 (352-415)||(32750371-32750434)
chr8 (338-419)||(3672247-3672327)
chr8 (122-185)||(14577154-14577217)
chr8 (358-409)||(15863285-15863336)
chr8 (194-340)||(17479956-17480101)
chr8 (121-183)||(30928309-30928371)
chr8 (122-184)||(35482990-35483052)
chr8 (120-177)||(17844167-17844224)
chr8 (122-179)||(30928601-30928658)
chr8 (122-182)||(27912386-27912446)
chr8 (122-182)||(27958805-27958865)
[»] chr1 (26 HSPs)
chr1 (188-419)||(41971746-41971977)
chr1 (188-419)||(3829430-3829659)
chr1 (194-419)||(11957845-11958069)
chr1 (194-417)||(35907977-35908199)
chr1 (194-419)||(17445741-17445965)
chr1 (255-419)||(7433869-7434033)
chr1 (255-419)||(42310495-42310659)
chr1 (194-419)||(32981551-32981775)
chr1 (255-418)||(23313443-23313606)
chr1 (276-419)||(33490153-33490296)
chr1 (220-418)||(28463396-28463582)
chr1 (275-417)||(32944357-32944499)
chr1 (263-397)||(5715373-5715507)
chr1 (296-371)||(7350228-7350303)
chr1 (358-420)||(33774629-33774691)
chr1 (275-416)||(18716322-18716463)
chr1 (255-418)||(3604699-3604863)
chr1 (122-182)||(12115240-12115300)
chr1 (255-350)||(42412370-42412464)
chr1 (188-397)||(17744594-17744802)
chr1 (118-181)||(7113863-7113926)
chr1 (122-185)||(19897170-19897233)
chr1 (125-180)||(40290073-40290128)
chr1 (378-420)||(9901670-9901712)
chr1 (122-184)||(17611713-17611775)
chr1 (118-184)||(25780173-25780239)
[»] chr4 (57 HSPs)
chr4 (194-419)||(3292392-3292616)
chr4 (194-419)||(28876810-28877034)
chr4 (194-419)||(6235957-6236181)
chr4 (194-419)||(6689731-6689955)
chr4 (223-419)||(29995507-29995703)
chr4 (194-419)||(43143080-43143304)
chr4 (188-419)||(20129762-20129993)
chr4 (188-419)||(26438766-26438997)
chr4 (188-419)||(34406771-34407002)
chr4 (188-419)||(43356353-43356584)
chr4 (188-419)||(47501222-47501453)
chr4 (194-417)||(33135940-33136162)
chr4 (194-419)||(42333270-42333495)
chr4 (255-419)||(10352439-10352604)
chr4 (194-419)||(25931157-25931381)
chr4 (194-419)||(35546400-35546623)
chr4 (188-419)||(13012637-13012868)
chr4 (194-419)||(17510723-17510951)
chr4 (188-419)||(36381836-36382065)
chr4 (194-419)||(48989776-48990000)
chr4 (255-419)||(30077191-30077356)
chr4 (226-419)||(48130425-48130617)
chr4 (220-418)||(29134152-29134349)
chr4 (194-419)||(30110410-30110634)
chr4 (255-419)||(30216301-30216462)
chr4 (283-419)||(40529464-40529600)
chr4 (328-417)||(13394870-13394959)
chr4 (255-419)||(50204643-50204797)
chr4 (256-420)||(9415345-9415509)
chr4 (257-420)||(4038262-4038425)
chr4 (193-404)||(13502113-13502322)
chr4 (256-418)||(26546856-26547017)
chr4 (331-420)||(29094594-29094683)
chr4 (207-420)||(31853673-31853885)
chr4 (220-420)||(56225750-56225950)
chr4 (328-419)||(1818164-1818256)
chr4 (194-313)||(13390943-13391061)
chr4 (122-185)||(21360451-21360514)
chr4 (118-185)||(30055488-30055555)
chr4 (199-373)||(49062453-49062626)
chr4 (337-420)||(5290887-5290970)
chr4 (191-418)||(20629019-20629245)
chr4 (380-419)||(26448499-26448538)
chr4 (337-416)||(54933459-54933538)
chr4 (194-308)||(44157182-44157295)
chr4 (255-416)||(9070730-9070891)
chr4 (122-178)||(30799612-30799668)
chr4 (297-420)||(2941119-2941242)
chr4 (188-291)||(26449291-26449393)
chr4 (122-185)||(37872761-37872824)
chr4 (255-302)||(40529651-40529698)
chr4 (118-185)||(46143555-46143622)
chr4 (122-184)||(13294891-13294953)
chr4 (122-180)||(25297679-25297737)
chr4 (367-416)||(18625554-18625603)
chr4 (119-179)||(30055208-30055268)
chr4 (118-182)||(42856801-42856865)
[»] chr3 (39 HSPs)
chr3 (194-419)||(40081235-40081459)
chr3 (194-419)||(6930389-6930613)
chr3 (188-419)||(6268913-6269144)
chr3 (188-419)||(22967931-22968162)
chr3 (223-419)||(27935624-27935818)
chr3 (194-419)||(5135735-5135959)
chr3 (194-419)||(45183428-45183651)
chr3 (188-419)||(39772239-39772470)
chr3 (194-419)||(6503065-6503289)
chr3 (255-419)||(19390595-19390760)
chr3 (255-419)||(19565056-19565221)
chr3 (224-415)||(29564674-29564868)
chr3 (194-419)||(34083615-34083838)
chr3 (255-419)||(45336320-45336485)
chr3 (255-419)||(33041400-33041561)
chr3 (191-302)||(8257407-8257517)
chr3 (194-389)||(11017765-11017959)
chr3 (255-414)||(27912456-27912615)
chr3 (282-420)||(35937668-35937806)
chr3 (346-425)||(38282857-38282936)
chr3 (337-419)||(8257275-8257357)
chr3 (364-425)||(38415473-38415534)
chr3 (122-181)||(52091714-52091773)
chr3 (275-417)||(7468757-7468899)
chr3 (122-180)||(52090881-52090939)
chr3 (180-277)||(3159292-3159388)
chr3 (118-183)||(3612591-3612656)
chr3 (339-420)||(19814766-19814847)
chr3 (284-412)||(219189-219317)
chr3 (122-185)||(5048383-5048446)
chr3 (191-238)||(16094646-16094693)
chr3 (121-184)||(44506331-44506394)
chr3 (263-401)||(10842155-10842293)
chr3 (118-180)||(17574372-17574434)
chr3 (118-184)||(22975629-22975695)
chr3 (383-425)||(40368673-40368715)
chr3 (323-420)||(5177323-5177420)
chr3 (122-182)||(8851801-8851861)
chr3 (122-186)||(28830041-28830105)
[»] chr2 (35 HSPs)
chr2 (194-419)||(45419030-45419254)
chr2 (180-417)||(7072016-7072252)
chr2 (188-419)||(17444528-17444759)
chr2 (255-419)||(31581175-31581339)
chr2 (188-419)||(41251121-41251352)
chr2 (194-419)||(35963139-35963363)
chr2 (188-419)||(6403291-6403522)
chr2 (255-419)||(12756393-12756557)
chr2 (255-419)||(18982038-18982202)
chr2 (194-417)||(4554689-4554910)
chr2 (194-417)||(32126683-32126905)
chr2 (255-419)||(2957700-2957864)
chr2 (194-419)||(2286237-2286460)
chr2 (194-419)||(26162198-26162422)
chr2 (256-420)||(37621618-37621782)
chr2 (191-413)||(26591496-26591716)
chr2 (204-414)||(18829309-18829518)
chr2 (276-417)||(26238390-26238531)
chr2 (255-419)||(42442433-42442597)
chr2 (283-419)||(44084185-44084321)
chr2 (223-380)||(45121695-45121851)
chr2 (303-419)||(21556543-21556659)
chr2 (255-419)||(816613-816777)
chr2 (256-419)||(17373394-17373558)
chr2 (226-419)||(8058871-8059052)
chr2 (277-421)||(25391425-25391568)
chr2 (347-419)||(15441832-15441904)
chr2 (122-181)||(8322471-8322530)
chr2 (122-185)||(27360410-27360473)
chr2 (265-419)||(37226501-37226654)
chr2 (122-182)||(30337717-30337777)
chr2 (366-420)||(3843980-3844034)
chr2 (122-180)||(17846007-17846065)
chr2 (386-419)||(8147799-8147832)
chr2 (122-179)||(30337424-30337481)
[»] chr6 (27 HSPs)
chr6 (194-419)||(28997177-28997401)
chr6 (194-417)||(34948277-34948499)
chr6 (188-419)||(399066-399297)
chr6 (255-419)||(33228891-33229056)
chr6 (255-419)||(29743731-29743896)
chr6 (191-425)||(28931450-28931683)
chr6 (194-419)||(13838245-13838472)
chr6 (191-420)||(10231747-10231975)
chr6 (193-343)||(23217452-23217600)
chr6 (122-179)||(21424643-21424700)
chr6 (263-425)||(31373247-31373409)
chr6 (19-90)||(21424481-21424549)
chr6 (126-182)||(21419308-21419364)
chr6 (368-419)||(18339541-18339592)
chr6 (266-420)||(12098436-12098590)
chr6 (266-420)||(12849947-12850101)
chr6 (122-179)||(10026140-10026197)
chr6 (326-417)||(22814710-22814801)
chr6 (364-425)||(4335187-4335248)
chr6 (122-182)||(10027124-10027184)
chr6 (188-420)||(11796942-11797172)
chr6 (331-397)||(4335252-4335318)
chr6 (122-184)||(33595608-33595670)
chr6 (118-178)||(3218152-3218212)
chr6 (122-190)||(3922827-3922895)
chr6 (297-420)||(18261819-18261943)
chr6 (377-417)||(29341488-29341528)
[»] chr5 (46 HSPs)
chr5 (194-419)||(15959441-15959665)
chr5 (194-419)||(31680814-31681038)
chr5 (194-419)||(33430768-33430992)
chr5 (256-420)||(192353-192517)
chr5 (255-414)||(23034427-23034586)
chr5 (194-419)||(13818426-13818650)
chr5 (194-419)||(31501214-31501438)
chr5 (188-417)||(26282805-26283034)
chr5 (194-419)||(39657022-39657249)
chr5 (255-419)||(31271854-31272018)
chr5 (188-419)||(36293108-36293339)
chr5 (194-419)||(1775871-1776094)
chr5 (194-419)||(16333395-16333619)
chr5 (275-419)||(10034351-10034495)
chr5 (255-419)||(12278412-12278576)
chr5 (222-420)||(38268944-38269130)
chr5 (255-417)||(37255054-37255216)
chr5 (194-419)||(17332115-17332339)
chr5 (188-419)||(39435145-39435376)
chr5 (255-419)||(36291818-36291982)
chr5 (255-394)||(43069329-43069468)
chr5 (180-419)||(16155446-16155683)
chr5 (351-420)||(30297604-30297673)
chr5 (255-420)||(27750683-27750846)
chr5 (298-420)||(11779160-11779282)
chr5 (191-389)||(24792894-24793096)
chr5 (255-404)||(18266162-18266315)
chr5 (276-355)||(28801712-28801791)
chr5 (231-420)||(8788264-8788452)
chr5 (321-410)||(23034262-23034351)
chr5 (323-420)||(35911354-35911451)
chr5 (325-425)||(35338308-35338408)
chr5 (337-420)||(20368490-20368573)
chr5 (220-338)||(30297492-30297606)
chr5 (364-416)||(33094355-33094407)
chr5 (122-190)||(35362206-35362274)
chr5 (337-420)||(20363128-20363211)
chr5 (256-418)||(30922486-30922648)
chr5 (122-179)||(27843023-27843080)
chr5 (293-414)||(1050533-1050650)
chr5 (122-181)||(15179078-15179137)
chr5 (365-416)||(22761177-22761228)
chr5 (122-181)||(32994443-32994502)
chr5 (122-180)||(32458075-32458133)
chr5 (122-184)||(35363278-35363340)
chr5 (122-179)||(19558161-19558218)
[»] scaffold0041 (1 HSPs)
scaffold0041 (194-419)||(53354-53578)
[»] scaffold0002 (2 HSPs)
scaffold0002 (188-419)||(479944-480175)
scaffold0002 (122-182)||(330194-330254)
[»] scaffold0134 (1 HSPs)
scaffold0134 (193-420)||(17754-17978)
[»] scaffold0069 (1 HSPs)
scaffold0069 (188-414)||(18012-18238)
[»] scaffold0495 (1 HSPs)
scaffold0495 (191-420)||(8467-8695)
[»] scaffold0166 (1 HSPs)
scaffold0166 (191-389)||(35277-35479)
[»] scaffold0831 (1 HSPs)
scaffold0831 (221-361)||(3383-3521)
[»] scaffold0311 (1 HSPs)
scaffold0311 (122-182)||(12885-12945)
[»] scaffold0029 (1 HSPs)
scaffold0029 (122-182)||(136913-136973)
[»] scaffold0347 (2 HSPs)
scaffold0347 (118-179)||(11940-12001)
scaffold0347 (123-180)||(12223-12280)
[»] scaffold0015 (1 HSPs)
scaffold0015 (383-419)||(2139-2175)


Alignment Details
Target: chr7 (Bit Score: 210; Significance: 1e-115; HSPs: 44)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 210; E-Value: 1e-115
Query Start/End: Original strand, 180 - 425
Target Start/End: Complemental strand, 49010420 - 49010175
Alignment:
Q  180 taaaaacaatttgcaaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaa 279  Q
    ||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||| |||||||||||||||||||||||||| |||    
T  49010420 taaaaacgatttgcaaagttttatagcatttcaatgacgattctatttatttttatttttaaacaaaaacgtgcaaaaattgaaattttgttcctaataa 49010321  T
Q  280 gcgtatactcactggtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatgaagttttgcagtttttaaacgagag 379  Q
    |||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  49010320 gcgtatactcacaggtcaaatttcgttccctaattttataagcatggttagaacataataagaatcttcacaatgaagttttgcaatttttaaacgagag 49010221  T
Q  380 acaaattaattataaattgtttaagtaattcataattatggaaaat 425  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||    
T  49010220 acaaattaattataaattgtttaagaaattcataattatggaaaat 49010175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 194 - 419
Target Start/End: Original strand, 43183964 - 43184188
Alignment:
Q  194 aaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatactcactg 293  Q
    ||||||| |||||||||| | | || || |||||||| | |||||  ||| |||| |||||||| |||||||||||||||  ||||||||||||||||      
T  43183964 aaagtttcatagcatttcgaagtcgtttaaatttattatgatttttcaaccaaaacgtgcaaaa-ttgaaattttgttccgcgtaagcgtatactcacaa 43184062  T
Q  294 gtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatgaagttttgcagtttttaaacgagagacaaattaattata 393  Q
    ||||||||| |||||||||| || || |||||  |||||||| ||||||| ||||||| |||| ||||| ||| ||||||||||| ||||||||||||||    
T  43184063 gtcaaatttagttccctaattttgtaggcatgactagaacatgataagaaccttcacagtgaaattttgtagtctttaaacgagatacaaattaattata 43184162  T
Q  394 aattgtttaagtaattcataattatg 419  Q
    ||||||||||| ||||||||||||||    
T  43184163 aattgtttaagaaattcataattatg 43184188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 194 - 419
Target Start/End: Original strand, 3113616 - 3113840
Alignment:
Q  194 aaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatactcactg 293  Q
    ||||||| ||||||| || | | || || |||||||||| |||||  |||  ||| |||||||| |||||||||||||||  ||||||||||||||||      
T  3113616 aaagtttcatagcatatcgaagtcgtttaaatttattttgatttttcaactgaaacgtgcaaaa-ttgaaattttgttccgcgtaagcgtatactcacaa 3113714  T
Q  294 gtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatgaagttttgcagtttttaaacgagagacaaattaattata 393  Q
    ||||||||| |||||||||| || || |||||  |||||||| | ||||| |||||||||||| ||||| | ||||||||||||| ||||||||||||||    
T  3113715 gtcaaatttagttccctaattttgtaggcatgactagaacatgacaagaaccttcacaatgaaattttgtaatttttaaacgagatacaaattaattata 3113814  T
Q  394 aattgtttaagtaattcataattatg 419  Q
    ||||||||||| ||||||||||||||    
T  3113815 aattgtttaagaaattcataattatg 3113840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 194 - 419
Target Start/End: Complemental strand, 5556135 - 5555911
Alignment:
Q  194 aaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatactcactg 293  Q
    ||||||| ||| ||| |||| | || || |||||||||| |||||  |||  ||| |||||||| |||||||||||||||  ||||||||||||||||      
T  5556135 aaagtttcataacatatcaaagtcgtttaaatttattttgatttttcaactgaaacgtgcaaaa-ttgaaattttgttccgcgtaagcgtatactcacaa 5556037  T
Q  294 gtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatgaagttttgcagtttttaaacgagagacaaattaattata 393  Q
    ||||||||| |||||||||| || || |||||  |||||||| | ||||| |||||||||||| ||||| | ||||||||||||| ||||||||||||||    
T  5556036 gtcaaatttagttccctaattttgtaggcatgactagaacatgacaagaaccttcacaatgaaattttgtaatttttaaacgagatacaaattaattata 5555937  T
Q  394 aattgtttaagtaattcataattatg 419  Q
    ||||||||||| ||||||||||||||    
T  5555936 aattgtttaagaaattcataattatg 5555911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 194 - 419
Target Start/End: Complemental strand, 33686234 - 33686010
Alignment:
Q  194 aaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatactcactg 293  Q
    ||||||| |||||||||  | | || || |||||||||| |||||  ||| ||||  ||||||| || ||||||||||||  ||||||||||||||||      
T  33686234 aaagtttcatagcattttgaagtcgtttaaatttattttgatttttcaaccaaaacatgcaaaa-ttaaaattttgttccgcgtaagcgtatactcacaa 33686136  T
Q  294 gtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatgaagttttgcagtttttaaacgagagacaaattaattata 393  Q
    ||||||||| |||||||| | || || |||||  |||||||| ||||||||||||||||| || ||||| ||||||||||||||| ||||||||||||||    
T  33686135 gtcaaatttagttccctacttttgtaggcatgactagaacatgataagaatcttcacaataaaattttgtagtttttaaacgagatacaaattaattata 33686036  T
Q  394 aattgtttaagtaattcataattatg 419  Q
    ||||||||||| ||||||||||||||    
T  33686035 aattgtttaagaaattcataattatg 33686010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 93; E-Value: 5e-45
Query Start/End: Original strand, 188 - 419
Target Start/End: Original strand, 14776594 - 14776825
Alignment:
Q  188 atttgcaaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatac 287  Q
    ||||| ||||||| |||||||||||| | || || |||||||||| |||||  |||  ||| |||||||| |||||||||||||||  ||||||||||||    
T  14776594 atttgtaaagtttcatagcatttcaaagtcgtttaaatttattttaatttttcaactgaaacgtgcaaaa-ttgaaattttgttccgcgtaagcgtatac 14776692  T
Q  288 tcactggtcaaatttcgttccctaatcttataagcatggttagaacataataagaatc-ttcacaatgaagttttgcagtttttaaacgagagacaaatt 386  Q
    ||||  ||||||||| |||||||||| || || |||||  ||||| || ||||||| | ||||||||||| ||||| |  |||||||||||| |||||||    
T  14776693 tcacaagtcaaatttagttccctaattttgtaggcatgactagaatatgataagaaacattcacaatgaaattttgtaaattttaaacgagatacaaatt 14776792  T
Q  387 aattataaattgtttaagtaattcataattatg 419  Q
    |||||||||||||||||| ||||||||||||||    
T  14776793 aattataaattgtttaagaaattcataattatg 14776825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 194 - 419
Target Start/End: Original strand, 8867227 - 8867451
Alignment:
Q  194 aaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatactcactg 293  Q
    ||||||| |||||||||| | | || |  |||||||| | |||||  ||| |||| |||||||| |||||||||||||||  ||||||||||||||||      
T  8867227 aaagtttcatagcatttcgaagtcgttaaaatttattatgatttttcaaccaaaacgtgcaaaa-ttgaaattttgttccgcgtaagcgtatactcacaa 8867325  T
Q  294 gtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatgaagttttgcagtttttaaacgagagacaaattaattata 393  Q
    ||||||||| |||||||||| || || |||||  |||||||| ||||||| ||||||| |||| ||||| ||| ||||||| ||| ||||||||||||||    
T  8867326 gtcaaatttagttccctaattttgtaggcatgactagaacatgataagaaccttcacagtgaaattttgtagtctttaaacaagatacaaattaattata 8867425  T
Q  394 aattgtttaagtaattcataattatg 419  Q
    ||||||||||| ||||||||||||||    
T  8867426 aattgtttaagaaattcataattatg 8867451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 194 - 419
Target Start/End: Original strand, 40919517 - 40919741
Alignment:
Q  194 aaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatactcactg 293  Q
    ||||||| |||||||||| | | || || |||||||| | |||||  ||| |||| |||||||| |||||||||||||||  ||||| ||||||||||      
T  40919517 aaagtttcatagcatttcgaagtcgtttaaatttattatgatttttcaaccaaaacgtgcaaaa-ttgaaattttgttccgcgtaagtgtatactcacaa 40919615  T
Q  294 gtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatgaagttttgcagtttttaaacgagagacaaattaattata 393  Q
    ||||||||| |||||||||| || || |||||  |||| ||| ||||||| ||||||| |||| ||||| ||| ||||||||||| ||||||||||||||    
T  40919616 gtcaaatttagttccctaattttgtaggcatgactagagcatgataagaaccttcacagtgaaattttgtagtctttaaacgagatacaaattaattata 40919715  T
Q  394 aattgtttaagtaattcataattatg 419  Q
    ||||||||||| ||||||||||||||    
T  40919716 aattgtttaagaaattcataattatg 40919741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 255 - 419
Target Start/End: Complemental strand, 7003336 - 7003172
Alignment:
Q  255 aaaattgaaattttgttcctagtaagcgtatactcactggtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatg 354  Q
    |||||||||||||||||||  ||||||||||||| ||  ||||| ||| |||||||||| || || |||||  |||||||| ||||||| ||||||||||    
T  7003336 aaaattgaaattttgttccgtgtaagcgtatactaacaagtcaagtttagttccctaattttgtaggcatgactagaacatgataagaaccttcacaatg 7003237  T
Q  355 aagttttgcagtttttaaacgagagacaaattaattataaattgtttaagtaattcataattatg 419  Q
    || ||||| ||| ||||||||| | ||||||||||||||||||||||||| ||||||||||||||    
T  7003236 aaattttgtagtctttaaacgatatacaaattaattataaattgtttaagaaattcataattatg 7003172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 255 - 419
Target Start/End: Complemental strand, 7049207 - 7049043
Alignment:
Q  255 aaaattgaaattttgttcctagtaagcgtatactcactggtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatg 354  Q
    |||||||||||||||||||  ||||||||||||| ||  ||||| ||| |||||||||| || || |||||  |||||||| ||||||| ||||||||||    
T  7049207 aaaattgaaattttgttccgtgtaagcgtatactaacaagtcaagtttagttccctaattttgtaggcatgactagaacatgataagaaccttcacaatg 7049108  T
Q  355 aagttttgcagtttttaaacgagagacaaattaattataaattgtttaagtaattcataattatg 419  Q
    || ||||| ||| ||||||||| | ||||||||||||||||||||||||| ||||||||||||||    
T  7049107 aaattttgtagtctttaaacgatatacaaattaattataaattgtttaagaaattcataattatg 7049043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 424 - 512
Target Start/End: Complemental strand, 49010105 - 49010017
Alignment:
Q  424 atcttaaacatgtctagaaaacaaataattcaacctcgcctatcattgattaaagcagcgaataaaaaatcttggtctctagaaatttc 512  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  49010105 atcttaaacatgtctagaaaataaataattcaacctcgcctatcattgattaaagcagcgaataaaaaatcttggtctctagaaatttc 49010017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 255 - 417
Target Start/End: Original strand, 11020585 - 11020747
Alignment:
Q  255 aaaattgaaattttgttcctagtaagcgtatactcactggtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatg 354  Q
    |||||||||||||||||||  ||||||||||| |||   ||||||||| ||||||||||||| || |||||  ||||  || ||||||| |||||||| |    
T  11020585 aaaattgaaattttgttccgcgtaagcgtataatcataagtcaaatttagttccctaatcttgtaggcatgactagacaatgataagaaccttcacaacg 11020684  T
Q  355 aagttttgcagtttttaaacgagagacaaattaattataaattgtttaagtaattcataatta 417  Q
    || ||||| ||||||||||||||| ||||||||||||||||||||||||| |||| |||||||    
T  11020685 aaattttggagtttttaaacgagatacaaattaattataaattgtttaagaaatttataatta 11020747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 255 - 417
Target Start/End: Original strand, 34388636 - 34388798
Alignment:
Q  255 aaaattgaaattttgttcctagtaagcgtatactcactggtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatg 354  Q
    |||||||||||||||||||  |||||| |||| ||||  ||||||||| |||||||||| || || |||||  | |||||| ||||||| ||||||| ||    
T  34388636 aaaattgaaattttgttccgcgtaagcatatattcacaagtcaaatttagttccctaattttgtaggcatgactggaacatgataagaaccttcacagtg 34388735  T
Q  355 aagttttgcagtttttaaacgagagacaaattaattataaattgtttaagtaattcataatta 417  Q
    || ||||| ||| ||||||||||| ||||||||||||||||||||||||| ||||||||||||    
T  34388736 aaattttgtagtctttaaacgagatacaaattaattataaattgtttaagaaattcataatta 34388798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 194 - 419
Target Start/End: Complemental strand, 36631488 - 36631265
Alignment:
Q  194 aaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatactcactg 293  Q
    ||||||| |||||||||| | | || || |||||||||| |||||  |||  ||| |||||||| |||||||||||||||  ||||||||||||||||      
T  36631488 aaagtttcatagcatttcgaagtcgtttaaatttattttgatttttcaactgaaacgtgcaaaa-ttgaaattttgttccgcgtaagcgtatactcacaa 36631390  T
Q  294 gtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatgaagttttgcagtttttaaacgagagacaaattaattata 393  Q
    | ||||||| |||| ||||| || || |||||  |||||||| |||||||  ||||||||||| ||||| | ||||||||||||| |||| ||||||||     
T  36631389 g-caaatttagttctctaattttgtaggcatgactagaacatgataagaactttcacaatgaaattttgtaatttttaaacgagatacaatttaattatc 36631291  T
Q  394 aattgtttaagtaattcataattatg 419  Q
    ||||||||||| ||||||||||||||    
T  36631290 aattgtttaagaaattcataattatg 36631265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 194 - 395
Target Start/End: Original strand, 38637878 - 38638078
Alignment:
Q  194 aaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatactcactg 293  Q
    ||||||| |||||||||| | | || || |||||||| | |||||  ||| |||| |||||||| |||||||||||||||  ||||||||||||||||      
T  38637878 aaagtttcatagcatttcgaagtcgtttaaatttattatgatttttcaaccaaaacgtgcaaaa-ttgaaattttgttccgcgtaagcgtatactcacaa 38637976  T
Q  294 gtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatgaagttttgcagtttttaaacgagagacaaattaattata 393  Q
    ||||||||| |||||||||| || || |||||  |||||||| ||||||| ||||||| |||| ||||| ||| ||||||||||| ||||||||||||||    
T  38637977 gtcaaatttagttccctaattttgtaggcatgactagaacatgataagaaccttcacagtgaatttttgtagtctttaaacgagatacaaattaattata 38638076  T
Q  394 aa 395  Q
    ||    
T  38638077 aa 38638078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 256 - 420
Target Start/End: Complemental strand, 20606235 - 20606071
Alignment:
Q  256 aaattgaaattttgttcctagtaagcgtatactcactggtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatga 355  Q
    |||||| ||||||||||| ||||||| |||||| || | ||||||||||||   ||||  | || ||||||||||||||| ||||||| |||||| ||||    
T  20606235 aaattgcaattttgttccgagtaagcatatactgacggatcaaatttcgttatataattctgtaggcatggttagaacatgataagaaccttcaccatga 20606136  T
Q  356 agttttgcagtttttaaacgagagacaaattaattataaattgtttaagtaattcataattatgg 420  Q
    | ||||| |||||||||| |||| ||||||||||||| ||||||||||| |||||||||||||||    
T  20606135 aattttgaagtttttaaatgagatacaaattaattatgaattgtttaagaaattcataattatgg 20606071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 194 - 419
Target Start/End: Complemental strand, 8394797 - 8394574
Alignment:
Q  194 aaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatactcactg 293  Q
    ||||||| |||||||||| | | || || |||||||||| |||||  |||  ||| |||| ||| |||||||||||||||  ||||||||||||||||      
T  8394797 aaagtttcatagcatttcgaagtcgtttaaatttattttgatttttcaactgaaacgtgccaaa-ttgaaattttgttccgcgtaagcgtatactcacaa 8394699  T
Q  294 gtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatgaagttttgcagtttttaaacgagagacaaattaattata 393  Q
    |  |||||| |||||||||| || || |||||  |||||||| ||||||| |||||| ||||| ||||| | |||||||| |||| | ||||||||||||    
T  8394698 ga-aaatttagttccctaattttgtaggcatgactagaacatgataagaaccttcacgatgaaattttgtaatttttaaatgagatataaattaattata 8394600  T
Q  394 aattgtttaagtaattcataattatg 419  Q
    ||||||||||| ||||||||||||||    
T  8394599 aattgtttaagaaattcataattatg 8394574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 194 - 419
Target Start/End: Complemental strand, 26625416 - 26625193
Alignment:
Q  194 aaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatactcactg 293  Q
    ||||||| |||||||||| | |  | || |||||||| | |||||  ||| |||| |||||||| |||||||||||||||  ||||||||||||||||      
T  26625416 aaagtttcatagcatttcgaagttgtttaaatttattatgatttttcaaccaaaacgtgcaaaa-ttgaaattttgttccgcgtaagcgtatactcacaa 26625318  T
Q  294 gtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatgaagttttgcagtttttaaacgagagacaaattaattata 393  Q
    || |||||| |||||||||| || || |||||  |||||||| ||||||| ||||||| |||| ||||| ||| |||||| |||| ||||||||||||||    
T  26625317 gttaaatttagttccctaattttgtaggcatgactagaacatgataagaaccttcacagtgaaattttgtagtctttaaatgagatacaaattaattata 26625218  T
Q  394 aattgtttaagtaattcataattatg 419  Q
    |||||||| ||  |||||||||||||    
T  26625217 aattgttt-agagattcataattatg 26625193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 263 - 421
Target Start/End: Original strand, 13072424 - 13072582
Alignment:
Q  263 aattttgttcctagtaagcgtatactcactggtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatgaagttttg 362  Q
    ||||||||||  ||||||||||||||||| |||||||||| |||| ||||| ||  | | ||| |||||| || ||||||| |||||| ||||| |||||    
T  13072424 aattttgttcagagtaagcgtatactcacgggtcaaattttgttctctaattttggaggtatgtttagaatatcataagaaccttcaccatgaaattttg 13072523  T
Q  363 cagtttttaaacgagagacaaattaattataaattgtttaagtaattcataattatgga 421  Q
     || |||||||||||| || |||||||||| ||||||||||| ||||||||||||||||    
T  13072524 gagattttaaacgagatactaattaattatgaattgtttaagaaattcataattatgga 13072582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 241 - 420
Target Start/End: Complemental strand, 20609542 - 20609364
Alignment:
Q  241 aacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatactcactggtcaaatttcgttccctaatcttataagcatggttagaacataataa 340  Q
    |||||||| |||||||| | | |||||| |||| | ||||||||||||||| ||||||||| ||||   ||||  | || ||||||||||||||  ||||    
T  20609542 aacaaaaacgtgcaaaa-tagcaatttttttccgaataagcgtatactcacgggtcaaattccgttatataattctgtaggcatggttagaacaagataa 20609444  T
Q  341 gaatcttcacaatgaagttttgcagtttttaaacgagagacaaattaattataaattgtttaagtaattcataattatgg 420  Q
    ||| |||||| ||| | ||||| || ||||||| |||| ||||||||||||| ||| ||||||| |||||||||||||||    
T  20609443 gaaccttcaccatgcaattttgaagattttaaatgagatacaaattaattatgaatagtttaagaaattcataattatgg 20609364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 122 - 181
Target Start/End: Original strand, 29706877 - 29706936
Alignment:
Q  122 ataaaggacgaaaacgttacctaaaaataagttatgggaccatttctgtaattttgccta 181  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29706877 ataaaggacgaaaacgttacctaaaaataagttatgggaccatttctgtaattttgccta 29706936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 263 - 420
Target Start/End: Complemental strand, 20612010 - 20611853
Alignment:
Q  263 aattttgttcctagtaagcgtatactcactggtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatgaagttttg 362  Q
    |||||| |||| |||||||||||||||||  |||||||| ||||   ||||  | || |||| |||||||||| ||||||| |||||| ||| | |||||    
T  20612010 aatttttttccgagtaagcgtatactcacgcgtcaaattccgttatataattctgtaggcatagttagaacatgataagaaccttcaccatgcaattttg 20611911  T
Q  363 cagtttttaaacgagagacaaattaattataaattgtttaagtaattcataattatgg 420  Q
     || ||||||| |||| ||||||||||||| ||| ||||||| |||||||||||||||    
T  20611910 aagattttaaatgagatacaaattaattatgaatagtttaagaaattcataattatgg 20611853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 194 - 362
Target Start/End: Original strand, 37001736 - 37001903
Alignment:
Q  194 aaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatactcactg 293  Q
    ||||||| |||||||||| | | || || |||||||| | |||||  ||| |||| |||||||| |||||||||||||||  ||||||||||||||||      
T  37001736 aaagtttcatagcatttcgaagtcgtttaaatttattatgatttttcaaccaaaatgtgcaaaa-ttgaaattttgttccgcgtaagcgtatactcacaa 37001834  T
Q  294 gtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatgaagttttg 362  Q
    ||||||||| |||||||||| || || |||||  |||||||| ||||||| ||||||| |||| |||||    
T  37001835 gtcaaatttagttccctaattttgtaggcatgactagaacatgataagaaccttcacagtgaaattttg 37001903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 194 - 419
Target Start/End: Complemental strand, 36658839 - 36658626
Alignment:
Q  194 aaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatactcactg 293  Q
    ||||||| |||||||||| | | || || |||||||||| |||||  ||| |||| |||||||| |||||||||||||||  ||||||||||||||||      
T  36658839 aaagtttcatagcatttcgaagtcgtttaaatttattttgatttttcaaccaaaacgtgcaaaa-ttgaaattttgttccgcgtaagcgtatactcacaa 36658741  T
Q  294 gtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatgaagttttgcagtttttaaacgagagacaaattaattata 393  Q
    || ||||||  |||||||||  | || ||| |  ||||||           ||||||||| || ||||| ||| ||||||||||| ||||||||||||||    
T  36658740 gtgaaatttaattccctaattctgtaggcaagactagaac-----------cttcacaataaaattttgtagtctttaaacgagatacaaattaattata 36658652  T
Q  394 aattgtttaagtaattcataattatg 419  Q
    ||||||||||| ||||||||||||||    
T  36658651 aattgtttaagaaattcataattatg 36658626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 191 - 420
Target Start/End: Complemental strand, 23582642 - 23582414
Alignment:
Q  191 tgcaaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatactca 290  Q
    ||||||||||| ||||| ||||| |||  ||| ||||||||| |||||  ||| ||||  ||| ||| ||| ||||||||||| |||||| ||||| |||    
T  23582642 tgcaaagttttgtagcaattcaaagacatttctatttattttaatttttcaactaaaacttgctaaa-ttgcaattttgttccgagtaagagtataatca 23582544  T
Q  291 ctggtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatgaagttttgcagtttttaaacgagagacaaattaatt 390  Q
    | |||||||||| |||  ||||| || || ||||||||||||||| |||| ||  |||||  |||| ||| | |||||||||| |||| |  ||||||||    
T  23582543 cgggtcaaattttgttatctaattttttaggcatggttagaacatcataataacattcaccgtgaaatttggtagtttttaaatgagatatgaattaatt 23582444  T
Q  391 ataaattgtttaagtaattcataattatgg 420  Q
    || | || || ||| |||||||| ||||||    
T  23582443 atgactttttaaagaaattcatagttatgg 23582414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 326 - 415
Target Start/End: Complemental strand, 45710054 - 45709965
Alignment:
Q  326 gttagaacataataagaatcttcacaatgaagttttgcagtttttaaacgagagacaaattaattataaattgtttaagtaattcataat 415  Q
    |||||||||| |||||||||||||| ||||| ||||  ||||||| |||||| ||  |||||||||||||||||||||||||||| ||||    
T  45710054 gttagaacattataagaatcttcaccatgaaattttagagtttttgaacgagggaagaattaattataaattgtttaagtaattcttaat 45709965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 126 - 180
Target Start/End: Complemental strand, 29701597 - 29701543
Alignment:
Q  126 aggacgaaaacgttacctaaaaataagttatgggaccatttctgtaattttgcct 180  Q
    ||||||||||||||||||||||||||||||| ||||||||| |||||||||||||    
T  29701597 aggacgaaaacgttacctaaaaataagttataggaccatttgtgtaattttgcct 29701543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 180 - 271
Target Start/End: Original strand, 8722827 - 8722917
Alignment:
Q  180 taaaaacaatttgcaaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgtt 271  Q
    |||||| |||||||||||||| |||||||||| |  |||||||||||||||||||||||  ||| |||  |||| |||||||||||||||||    
T  8722827 taaaaataatttgcaaagtttcatagcatttcgaatacgattcaatttatttttatttttcaaccaaaccgtgc-aaaattgaaattttgtt 8722917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 19 - 88
Target Start/End: Original strand, 29706715 - 29706781
Alignment:
Q  19 cttgcaggttgaagggtgactgagaagaagaagcttgtgtgaacattggagaagatgaacataaagttaa 88  Q
    ||||||||||||||||||| ||||||   |||||||||||||||||| |||||||||||||||| |||||    
T  29706715 cttgcaggttgaagggtgattgagaa---gaagcttgtgtgaacattagagaagatgaacataacgttaa 29706781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 324 - 417
Target Start/End: Complemental strand, 32199229 - 32199136
Alignment:
Q  324 tggttagaacataataagaatcttcacaatgaagttttgcagtttttaaacgagagacaaattaattataaattgtttaagtaattcataatta 417  Q
    |||||| |||||  |||||||||||||  || | ||||  |||||||||||||||||||||||||||| |||||||||| | ||||| ||||||    
T  32199229 tggttataacatcgtaagaatcttcaccgtggaattttatagtttttaaacgagagacaaattaattaaaaattgtttatgaaattcttaatta 32199136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 331 - 419
Target Start/End: Complemental strand, 33387134 - 33387046
Alignment:
Q  331 aacataataagaatcttcacaatgaagttttgcagtttttaaacgagagacaaattaattataaattgtttaagtaattcataattatg 419  Q
    |||||||||| ||  ||||| ||||| ||||  ||||||| |||||| || ||||||||||| ||||||||||| ||||||||||||||    
T  33387134 aacataataataactttcaccatgaaatttttgagtttttgaacgagtgataaattaattatgaattgtttaagaaattcataattatg 33387046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 221 - 425
Target Start/End: Original strand, 12224506 - 12224705
Alignment:
Q  221 tcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatactcactggtcaaatttcgttccctaatcttataa 320  Q
    |||||| ||||| |||||  ||| |||| |||||||| ||| |||||||||   ||||| | |||||||||  ||||||| ||| |||||||| |||||     
T  12224506 tcaattgattttgatttttcaaccaaaacgtgcaaaa-ttgcaattttgttatgagtaatcatatactcacatgtcaaatgtcgctccctaattttatag 12224604  T
Q  321 gcatggttagaacataataagaatcttcacaatgaagttttgcagtttttaaacgagagacaaattaattataaattgtttaagtaattcataattatgg 420  Q
    ||||| ||||||||| ||||||   ||||| || || ||||  |||||||||||||||||  |||||||||  |||    |||| |||||||||||||||    
T  12224605 gcatgattagaacatcataaga---ttcaccataaaattttagagtttttaaacgagaga-gaattaattaggaataacataagaaattcataattatgg 12224700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 118 - 180
Target Start/End: Complemental strand, 31894319 - 31894257
Alignment:
Q  118 aaaaataaaggacgaaaacgttacctaaaaataagttatgggaccatttctgtaattttgcct 180  Q
    |||||||||||||||||  ||||||||||| ||||||| ||||| |||| |||||||||||||    
T  31894319 aaaaataaaggacgaaagtgttacctaaaattaagttaagggactatttgtgtaattttgcct 31894257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 118 - 187
Target Start/End: Complemental strand, 44307672 - 44307603
Alignment:
Q  118 aaaaataaaggacgaaaacgttacctaaaaataagttatgggaccatttctgtaattttgcctaaaaaca 187  Q
    |||||||||||||||||  ||||||||||| ||||||| ||||| | || ||||||||||||| ||||||    
T  44307672 aaaaataaaggacgaaagtgttacctaaaattaagttaagggactaattgtgtaattttgccttaaaaca 44307603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 191 - 291
Target Start/End: Original strand, 31252295 - 31252394
Alignment:
Q  191 tgcaaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatactca 290  Q
    |||||||||| ||| ||||||||||| | |||||||||||||||||||  ||  |||| ||||  |||||| ||||||||||| || ||||||||| |||    
T  31252295 tgcaaagtttcataacatttcaatgatgtttcaatttatttttatttttgaatcaaaacgtgc-taaattgcaattttgttccgagcaagcgtatattca 31252393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 358 - 425
Target Start/End: Original strand, 8725240 - 8725307
Alignment:
Q  358 ttttgcagtttttaaacgagagacaaattaattataaattgtttaagtaattcataattatggaaaat 425  Q
    |||||||| ||||||| |||||| ||  ||||||||||||||||||| |||| |||||||||| ||||    
T  8725240 ttttgcagattttaaaggagagaaaaggtaattataaattgtttaagaaatttataattatgggaaat 8725307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 118 - 180
Target Start/End: Original strand, 31894539 - 31894601
Alignment:
Q  118 aaaaataaaggacgaaaacgttacctaaaaataagttatgggaccatttctgtaattttgcct 180  Q
    |||||||||||||||||| |||| |||||| ||||||| ||||| | || |||||||||||||    
T  31894539 aaaaataaaggacgaaaatgttatctaaaattaagttaagggactaattgtgtaattttgcct 31894601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 118 - 179
Target Start/End: Complemental strand, 1511251 - 1511190
Alignment:
Q  118 aaaaataaaggacgaaaacgttacctaaaaataagttatgggaccatttctgtaattttgcc 179  Q
    ||||||||||||||||||  |||||||||| ||||||| ||||| | || ||||||||||||    
T  1511251 aaaaataaaggacgaaaatattacctaaaattaagttaagggactaattgtgtaattttgcc 1511190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 337 - 417
Target Start/End: Complemental strand, 21634512 - 21634432
Alignment:
Q  337 ataagaatcttcacaatgaagttttgcagtttttaaacgagagacaaattaattataaattgtttaagtaattcataatta 417  Q
    |||||||||||||| || || ||||  ||||||||||||||  |  |||||||||||||||||||||  ||||| ||||||    
T  21634512 ataagaatcttcaccataaaattttagagtttttaaacgaggaatgaattaattataaattgtttaaaaaattcttaatta 21634432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 323 - 403
Target Start/End: Original strand, 28837412 - 28837491
Alignment:
Q  323 atggttagaacataataagaatcttcacaatgaagttttgcagtttttaaacgagagacaaattaattataaattgtttaa 403  Q
    |||||||||| || |||| || |||||||||||| ||||  ||||||| ||||||| ||||||||| ||| ||||||||||    
T  28837412 atggttagaatatcataaaaaccttcacaatgaaattttagagttttttaacgagaaacaaattaa-tatgaattgtttaa 28837491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 122 - 185
Target Start/End: Original strand, 1511475 - 1511538
Alignment:
Q  122 ataaaggacgaaaacgttacctaaaaataagttatgggaccatttctgtaattttgcctaaaaa 185  Q
    |||||||||||||  ||||||||||  ||||||| ||||| | || ||||||||||||||||||    
T  1511475 ataaaggacgaaagtgttacctaaatttaagttaagggactaattgtgtaattttgcctaaaaa 1511538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 122 - 181
Target Start/End: Complemental strand, 10878682 - 10878623
Alignment:
Q  122 ataaaggacgaaaacgttacctaaaaataagttatgggaccatttctgtaattttgccta 181  Q
    |||||||||||||  ||||||||||| ||||||| ||||| | || ||||||||||||||    
T  10878682 ataaaggacgaaagtgttacctaaaattaagttaagggactaattgtgtaattttgccta 10878623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 122 - 184
Target Start/End: Original strand, 28408529 - 28408591
Alignment:
Q  122 ataaaggacgaaaacgttacctaaaaataagttatgggaccatttctgtaattttgcctaaaa 184  Q
    |||||||||||||  |||||||||||  |||||| ||||| | || |||||||||||||||||    
T  28408529 ataaaggacgaaagtgttacctaaaataaagttaagggactaattgtgtaattttgcctaaaa 28408591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 366 - 418
Target Start/End: Complemental strand, 6184211 - 6184159
Alignment:
Q  366 tttttaaacgagagacaaattaattataaattgtttaagtaattcataattat 418  Q
    ||||||||| || || ||||||| ||| |||||||||||||||| ||||||||    
T  6184211 tttttaaactagggataaattaactatgaattgtttaagtaattaataattat 6184159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 113; Significance: 5e-57; HSPs: 42)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 113; E-Value: 5e-57
Query Start/End: Original strand, 191 - 419
Target Start/End: Complemental strand, 9175808 - 9175581
Alignment:
Q  191 tgcaaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatactca 290  Q
    ||||||||||||||||||||| | || ||||| ||||  |||||||||  ||| |||| |||||||| || |||||||||||||||||||| | ||||||    
T  9175808 tgcaaagttttatagcatttcgaagatgattctattttattttatttttcaactaaaatgtgcaaaa-ttaaaattttgttcctagtaagcatttactca 9175710  T
Q  291 ctggtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatgaagttttgcagtttttaaacgagagacaaattaatt 390  Q
      |||||||||| |||||||||| || || |||  |||||||||||||||||  |||||| |||||||||||||||||||||||||||||||||||||||    
T  9175709 tgggtcaaattttgttccctaattttgtaggcaatgttagaacataataagatccttcactatgaagttttgcagtttttaaacgagagacaaattaatt 9175610  T
Q  391 ataaattgtttaagtaattcataattatg 419  Q
    |||| || |||||| ||||||||||||||    
T  9175609 ataagttatttaagaaattcataattatg 9175581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 106; E-Value: 8e-53
Query Start/End: Original strand, 194 - 419
Target Start/End: Complemental strand, 42231608 - 42231384
Alignment:
Q  194 aaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatactcactg 293  Q
    |||||||||||||||||| | | || || |||||||||| |||||  ||| |||| |||||||| |||||||||||||||  ||||||||||||||||      
T  42231608 aaagttttatagcatttcgaagtcgtttaaatttattttgatttttcaaccaaaacgtgcaaaa-ttgaaattttgttccgcgtaagcgtatactcacaa 42231510  T
Q  294 gtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatgaagttttgcagtttttaaacgagagacaaattaattata 393  Q
    ||||||||| |||||||||| || || |||||  |||||||| ||||||| |||||| ||||| ||||| | ||||||||||||| ||||||||||||||    
T  42231509 gtcaaatttagttccctaattttgtaggcatgactagaacatgataagaaccttcacgatgaaattttgtaatttttaaacgagatacaaattaattata 42231410  T
Q  394 aattgtttaagtaattcataattatg 419  Q
    ||||||||||| ||||||||||||||    
T  42231409 aattgtttaagaaattcataattatg 42231384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 194 - 419
Target Start/End: Original strand, 3648288 - 3648512
Alignment:
Q  194 aaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatactcactg 293  Q
    ||||||| ||| |||||||| | || || |||||||||| |||||  ||| |||| |||||||| |||||||||||||||  ||||| ||||||||||      
T  3648288 aaagtttcataacatttcaaagtcgtttaaatttattttgatttttcaactaaaacgtgcaaaa-ttgaaattttgttccgcgtaagtgtatactcacaa 3648386  T
Q  294 gtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatgaagttttgcagtttttaaacgagagacaaattaattata 393  Q
    ||||||||| |||||||||| || || |||||  |||||||| ||||||| |||||||||||| ||||| | ||||||||||||| | ||||||||||||    
T  3648387 gtcaaatttagttccctaattttgtaggcatgactagaacatgataagaaccttcacaatgaaattttgtaatttttaaacgagataaaaattaattata 3648486  T
Q  394 aattgtttaagtaattcataattatg 419  Q
    ||||||||||| ||||||||||||||    
T  3648487 aattgtttaagaaattcataattatg 3648512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 194 - 419
Target Start/End: Complemental strand, 9877891 - 9877667
Alignment:
Q  194 aaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatactcactg 293  Q
    ||||||| |||||||||| | | || || |||||||||| |||||  ||| |||| |||||||| |||||||||||||||  |||||| |||||||||      
T  9877891 aaagtttcatagcatttcgaagtcgtttaaatttattttgatttttcaaccaaaacgtgcaaaa-ttgaaattttgttccgcgtaagcatatactcacaa 9877793  T
Q  294 gtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatgaagttttgcagtttttaaacgagagacaaattaattata 393  Q
    ||||||||| |||||||||| || || |||||  |||||||| ||||||| |||||||||||| ||||| ||| ||||||||||| |||||||||||||     
T  9877792 gtcaaatttagttccctaattttgtaggcatgactagaacatgataagaaccttcacaatgaaattttgtagtctttaaacgagatacaaattaattatg 9877693  T
Q  394 aattgtttaagtaattcataattatg 419  Q
    ||||||||||| ||||||||||||||    
T  9877692 aattgtttaagaaattcataattatg 9877667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 194 - 419
Target Start/End: Complemental strand, 379094 - 378871
Alignment:
Q  194 aaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatactcactg 293  Q
    ||||||| |||||||||| | | || ||||||||||||| ||||| || ||||| | ||||||| ||||| ||||||||| |||||| |||||||||  |    
T  379094 aaagtttcatagcatttcgaagtcgtttcaatttattttaattttgaaccaaaacg-tgcaaaa-ttgaatttttgttccgagtaagtgtatactcatag 378997  T
Q  294 gtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatgaagttttgcagtttttaaacgagagacaaattaattata 393  Q
    |||||||||  ||||||||| ||  | |||||  |||||||| ||||||| ||||||||| || ||||| ||||||||||||||| ||||||||||||||    
T  378996 gtcaaatttaattccctaattttgcaggcatgactagaacatgataagaaacttcacaataaaattttgtagtttttaaacgagatacaaattaattata 378897  T
Q  394 aattgtttaagtaattcataattatg 419  Q
    ||||||||||| ||||||||||||||    
T  378896 aattgtttaagaaattcataattatg 378871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 194 - 419
Target Start/End: Original strand, 2728689 - 2728913
Alignment:
Q  194 aaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatactcactg 293  Q
    ||||||| |||||||||| | | || || |||||||||| |||||  ||| |||| || ||||| ||||||||||||||   ||||| ||||||||||      
T  2728689 aaagtttcatagcatttcgaagtcgtttaaatttattttgatttttcaaccaaaacgttcaaaa-ttgaaattttgttctgcgtaagtgtatactcacaa 2728787  T
Q  294 gtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatgaagttttgcagtttttaaacgagagacaaattaattata 393  Q
    || |||||| |||||||||| ||||| |||||  |||||||| ||||||| ||||||| |||| ||||  ||||||||||||||| ||||||||||||||    
T  2728788 gttaaatttagttccctaattttataggcatgactagaacatgataagaaccttcacagtgaaattttatagtttttaaacgagatacaaattaattata 2728887  T
Q  394 aattgtttaagtaattcataattatg 419  Q
    ||||||||||| ||||||||||||||    
T  2728888 aattgtttaagaaattcataattatg 2728913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 194 - 419
Target Start/End: Original strand, 16787521 - 16787745
Alignment:
Q  194 aaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatactcactg 293  Q
    ||||||| |||||||||| | | || || |||||||| | |||||  ||| |||| |||||||| |||||||||||||||  ||||||||||||||||      
T  16787521 aaagtttcatagcatttcgaagtcgtttaaatttattatgatttttcaaccaaaacgtgcaaaa-ttgaaattttgttccgcgtaagcgtatactcacaa 16787619  T
Q  294 gtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatgaagttttgcagtttttaaacgagagacaaattaattata 393  Q
    ||||||||| |||||||||| || || |||||  |||| ||| |||||||  |||||| |||| ||||| ||| ||||||||||| ||||||||||||||    
T  16787620 gtcaaatttagttccctaattttgtaggcatgactagagcatgataagaactttcacagtgaaattttgtagtctttaaacgagatacaaattaattata 16787719  T
Q  394 aattgtttaagtaattcataattatg 419  Q
    ||||||||||| ||||||||||||||    
T  16787720 aattgtttaagaaattcataattatg 16787745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 202 - 419
Target Start/End: Original strand, 34136305 - 34136521
Alignment:
Q  202 atagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatactcactggtcaaatt 301  Q
    |||||||||| | | || || |||||||| | |||||  ||| |||| |||||||| |||||||||||||||  ||||||||||||||||  ||||||||    
T  34136305 atagcatttcgaagtcgtttaaatttattatgatttttcaaccaaaacgtgcaaaa-ttgaaattttgttccgcgtaagcgtatactcacaagtcaaatt 34136403  T
Q  302 tcgttccctaatcttataagcatggttagaacataataagaatcttcacaatgaagttttgcagtttttaaacgagagacaaattaattataaattgttt 401  Q
    | |||||||||| || || |||||  |||| ||| ||||||| ||||||| |||| ||||| ||| ||||||||||| ||||||||||||||||||||||    
T  34136404 tagttccctaattttgtaggcatgactagagcatgataagaaccttcacagtgaaattttgtagtctttaaacgagatacaaattaattataaattgttt 34136503  T
Q  402 aagtaattcataattatg 419  Q
    ||| ||||||||||||||    
T  34136504 aagaaattcataattatg 34136521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 255 - 419
Target Start/End: Complemental strand, 4404619 - 4404455
Alignment:
Q  255 aaaattgaaattttgttcctagtaagcgtatactcactggtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatg 354  Q
    |||||||||||||||||||  ||||||||||||||||  ||||||||| |||||||||| || || |||||  |||||||| ||||||| ||| ||| ||    
T  4404619 aaaattgaaattttgttccgcgtaagcgtatactcacaagtcaaatttagttccctaattttgtaggcatgactagaacatgataagaacctttacagtg 4404520  T
Q  355 aagttttgcagtttttaaacgagagacaaattaattataaattgtttaagtaattcataattatg 419  Q
    || ||||| ||| ||||||||||| ||||||||||||||||||||||||| ||||||||||||||    
T  4404519 aaattttgtagtctttaaacgagatacaaattaattataaattgtttaagaaattcataattatg 4404455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 188 - 419
Target Start/End: Complemental strand, 39915194 - 39914963
Alignment:
Q  188 atttgcaaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatac 287  Q
    ||||| ||||||| |||||||||| |   || || |||||||||| |||||  |||  ||| |||||||| |||||||||||||||  ||||||||||||    
T  39915194 atttgtaaagtttcatagcatttcgaaatcgtttaaatttattttgatttttcaactgaaacgtgcaaaa-ttgaaattttgttccgcgtaagcgtatac 39915096  T
Q  288 tcactggtcaaatttcgttccctaatcttataagcatggttagaacataataagaatc-ttcacaatgaagttttgcagtttttaaacgagagacaaatt 386  Q
    ||||  ||||||||| |||||||||| || || |||||  |||||||| ||||||| | ||||||||||| ||||| |  |||||||||||| |||||||    
T  39915095 tcacaagtcaaatttagttccctaattttgtaggcatgactagaacatgataagaaacattcacaatgaaattttgtaaattttaaacgagatacaaatt 39914996  T
Q  387 aattataaattgtttaagtaattcataattatg 419  Q
    |||||||||||||||||| ||||||||||||||    
T  39914995 aattataaattgtttaagaaattcataattatg 39914963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 255 - 409
Target Start/End: Complemental strand, 7278634 - 7278480
Alignment:
Q  255 aaaattgaaattttgttcctagtaagcgtatactcactggtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatg 354  Q
    |||||||||||||||||||  ||||||||||||||||  ||||||||| |||||||||| || || |||||  |||||||| ||||||| ||||||||||    
T  7278634 aaaattgaaattttgttccgcgtaagcgtatactcacaagtcaaatttagttccctaattttgtaggcatgactagaacatgataagaaccttcacaatg 7278535  T
Q  355 aagttttgcagtttttaaacgagagacaaattaattataaattgtttaagtaatt 409  Q
    || ||||| ||| ||||||||||| ||||||||||||||||||||||||| ||||    
T  7278534 aaattttgtagtctttaaacgagatacaaattaattataaattgtttaagaaatt 7278480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 192 - 419
Target Start/End: Complemental strand, 19262 - 19034
Alignment:
Q  192 gcaaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatactcac 291  Q
    ||||||||| ||||||||||||  | || |||||||| ||| |||||  | | ||||| | ||||| ||| ||||||||||| | ||| | |||||||||    
T  19262 gcaaagtttcatagcatttcaaaaatgactcaatttagtttgatttttcatccaaaagtttcaaaatttgcaattttgttccaaataaccatatactcac 19163  T
Q  292 tggtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttca-caatgaagttttgcagtttttaaacgagagacaaattaatt 390  Q
    ||||||||||| |||||||||| || |  |||||||||||| |  ||||||||||||| | | ||| ||||| ||||||||||| || ||||||||||||    
T  19162 tggtcaaattttgttccctaattttgtttgcatggttagaataccataagaatcttcaccgacgaaattttgaagtttttaaaccagggacaaattaatt 19063  T
Q  391 ataaattgtttaagtaattcataattatg 419  Q
    || ||||||||||| ||||||||||||||    
T  19062 attaattgtttaagaaattcataattatg 19034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 194 - 419
Target Start/End: Complemental strand, 23402779 - 23402555
Alignment:
Q  194 aaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatactcactg 293  Q
    ||||||| |||||||||| |   || || |||||||| | |||||  ||| |||| |||||||| |||||||||||||||  |||||||||| |||||      
T  23402779 aaagtttcatagcatttcgaaatcgtttaaatttattatgatttttcaaccaaaacgtgcaaaa-ttgaaattttgttccgcgtaagcgtatgctcacaa 23402681  T
Q  294 gtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatgaagttttgcagtttttaaacgagagacaaattaattata 393  Q
    ||||||||| |||||||||| || || |||||  |||||||| ||||||| ||||| | |||| ||||| ||| ||||||| ||| ||||||||||||||    
T  23402680 gtcaaatttagttccctaattttgtaggcatgactagaacatgataagaaccttcatagtgaaattttgtagtctttaaacaagatacaaattaattata 23402581  T
Q  394 aattgtttaagtaattcataattatg 419  Q
    | ||||||||| ||||||||||||||    
T  23402580 agttgtttaagaaattcataattatg 23402555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 255 - 419
Target Start/End: Original strand, 29727938 - 29728100
Alignment:
Q  255 aaaattgaaattttgttcctagtaagcgtatactcactggtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatg 354  Q
    |||||||||||||||||||  ||||||||||||||||  ||||||||| |||||||||| ||  | |||||  |||||||  |  |||| ||||||||||    
T  29727938 aaaattgaaattttgttccgcgtaagcgtatactcacaagtcaaatttagttccctaattttgcaggcatgactagaacacga--agaaccttcacaatg 29728035  T
Q  355 aagttttgcagtttttaaacgagagacaaattaattataaattgtttaagtaattcataattatg 419  Q
    || ||||| | ||||||||||||| ||||||||||||||||||||||||| ||||||||||||||    
T  29728036 aaattttgtaatttttaaacgagatacaaattaattataaattgtttaagaaattcataattatg 29728100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 276 - 419
Target Start/End: Original strand, 40470118 - 40470261
Alignment:
Q  276 gtaagcgtatactcactggtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatgaagttttgcagtttttaaacg 375  Q
    ||||||||||| ||||  | ||||||| |||||||||| || || |||||  || ||||| |||||||| ||||||||||| ||||| |||||||||| |    
T  40470118 gtaagcgtataatcacaaggcaaatttagttccctaattttgtaggcatgactaaaacatgataagaatattcacaatgaaattttgtagtttttaaatg 40470217  T
Q  376 agagacaaattaattataaattgtttaagtaattcataattatg 419  Q
    ||| ||||||||||||||||||||||||| ||||||||||||||    
T  40470218 agatacaaattaattataaattgtttaagaaattcataattatg 40470261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 193 - 417
Target Start/End: Original strand, 40401001 - 40401224
Alignment:
Q  193 caaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatactcact 292  Q
    |||||||| ||| |||||  | |||| ||| |||||||||||||||  ||| ||||  | | ||||||| |||||| |||| |||||||||||||||||     
T  40401001 caaagtttcatatcattttgaagacgtttcgatttatttttatttttcaaccaaaacatac-aaaattgcaattttattccgagtaagcgtatactcaca 40401099  T
Q  293 ggtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatgaagttttgcagtttttaaacgagagacaaattaattat 392  Q
    | ||||||||| ||||||||| |||   |||| |||||||||| ||||||| |||||  ||||  || || ||||||| |||||||||| ||||||||||    
T  40401100 gctcaaatttcattccctaattttacgggcatagttagaacatcataagaaccttcaacatgacattctggagtttttgaacgagagacgaattaattat 40401199  T
Q  393 aaattgtttaagtaattcataatta 417  Q
    ||||| ||| || ||||||||||||    
T  40401200 aaattattttagaaattcataatta 40401224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 182 - 421
Target Start/End: Complemental strand, 29352045 - 29351807
Alignment:
Q  182 aaaacaatttgcaaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagc 281  Q
    |||| ||| |||||| |||  ||||||||||| |||| || ||||| ||||||||||  ||| |||| |||| ||| ||| ||||||||||||||||| |    
T  29352045 aaaaaaatctgcaaattttcgtagcatttcaaagacgttttaatttgtttttatttttcaaccaaaacgtgcgaaa-ttgcaattttgttcctagtaaac 29351947  T
Q  282 gtatactcactggtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatgaagttttgcagtttttaaacgagagac 381  Q
    |||||||||   ||||||||  |||||||||  || || ||||||||||||||  |||| ||  ||||| ||||  ||||| ||||||||  ||||| ||    
T  29351946 gtatactcatgagtcaaattatgttccctaactttgtaggcatggttagaacagcataaaaactttcaccatgagattttggagtttttactcgagatac 29351847  T
Q  382 aaattaattataaattgtttaagtaattcataattatgga 421  Q
    |||||||| || |||| |||||| ||||||||||||||||    
T  29351846 aaattaataatgaattttttaagaaattcataattatgga 29351807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 193 - 420
Target Start/End: Original strand, 32539972 - 32540185
Alignment:
Q  193 caaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatactcact 292  Q
    |||||||| |||||||||| | |||| |||||||||||||||||||  ||| ||||  || |||| ||||||||||||||||||||||| ||||||||      
T  32539972 caaagtttcatagcatttcgaagacgtttcaatttatttttatttttcaaccaaaacatgtaaaa-ttgaaattttgttcctagtaagcatatactcatg 32540070  T
Q  293 ggtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatgaagttttgcagtttttaaacgagagacaaattaattat 392  Q
     ||||||||| ||             | ||||||||||||||||||||||| ||||| |||||| ||||  | |||||||| ||||||| ||||||||||    
T  32540071 tgtcaaattttgt-------------aggcatggttagaacataataagaaccttcaaaatgaaattttataatttttaaatgagagacgaattaattat 32540157  T
Q  393 aaattgtttaagtaattcataattatgg 420  Q
    ||||| |||||| |||| ||||||||||    
T  32540158 aaattttttaagaaatttataattatgg 32540185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 122 - 182
Target Start/End: Original strand, 14161495 - 14161555
Alignment:
Q  122 ataaaggacgaaaacgttacctaaaaataagttatgggaccatttctgtaattttgcctaa 182  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14161495 ataaaggacgaaaacgttacctaaaaataagttatgggaccatttctgtaattttgcctaa 14161555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 194 - 386
Target Start/End: Complemental strand, 3435917 - 3435726
Alignment:
Q  194 aaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatactcactg 293  Q
    ||||||| ||| |||||||| | || || |||||||||| |||||  ||| |||| | |||||| | |||||||||||||  |||||| |||||||||      
T  3435917 aaagtttcataacatttcaaagtcgtttaaatttattttgatttttcaaccaaaacgcgcaaaact-gaaattttgttccgcgtaagcatatactcacaa 3435819  T
Q  294 gtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatgaagttttgcagtttttaaacgagagacaaatt 386  Q
    ||||||||| ||||||||||  | || |||||  |||||||| |||||||  |||||||| || ||||| ||||||||||||||| |||||||    
T  3435818 gtcaaatttagttccctaattatgtaggcatgactagaacatgataagaacattcacaattaaattttgtagtttttaaacgagatacaaatt 3435726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 337 - 419
Target Start/End: Complemental strand, 15838816 - 15838734
Alignment:
Q  337 ataagaatcttcacaatgaagttttgcagtttttaaacgagagacaaattaattataaattgtttaagtaattcataattatg 419  Q
    ||||||| ||||||||| || ||||| | ||||||||||||| ||||||||||||||||||||||||| ||||||||||||||    
T  15838816 ataagaaccttcacaataaaattttgtaatttttaaacgagatacaaattaattataaattgtttaagaaattcataattatg 15838734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 256 - 417
Target Start/End: Original strand, 35852495 - 35852656
Alignment:
Q  256 aaattgaaattttgttcctagtaagcgtatactcactggtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatga 355  Q
    |||||| ||||||||||| | |||||  ||||||||  || |||||| |||| ||||| ||||| ||||||||||||||| |||| ||  ||||| || |    
T  35852495 aaattgcaattttgttccgaataagcaaatactcacgagtaaaattttgttctctaattttataggcatggttagaacatcataaaaactttcaccataa 35852594  T
Q  356 agttttgcagtttttaaacgagagacaaattaattataaattgtttaagtaattcataatta 417  Q
    |   ||| ||||||||| | || ||| |||||||||| ||||||||||| ||||||||||||    
T  35852595 aaaattggagtttttaatcaagggaccaattaattatgaattgtttaagaaattcataatta 35852656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 126 - 180
Target Start/End: Complemental strand, 14156217 - 14156163
Alignment:
Q  126 aggacgaaaacgttacctaaaaataagttatgggaccatttctgtaattttgcct 180  Q
    ||||||||||||||||||||||||||||||| ||||||||| |||||||||||||    
T  14156217 aggacgaaaacgttacctaaaaataagttataggaccatttgtgtaattttgcct 14156163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 255 - 397
Target Start/End: Original strand, 32964064 - 32964206
Alignment:
Q  255 aaaattgaaattttgttcctagtaagcgtatactcactggtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatg 354  Q
    ||||||| | ||||||||  ||||||| | || |||| ||||||||||||||||||||| || | |||||| ||| ||||| ||||| | |||||| ||     
T  32964064 aaaattgcatttttgttcagagtaagcatttaatcacgggtcaaatttcgttccctaattttgttagcatgtttataacatcataaggaccttcaccatt 32964163  T
Q  355 aagttttgcagtttttaaacgagagacaaattaattataaatt 397  Q
    |||||||  ||||||||||||| |  |||||||||||| ||||    
T  32964164 aagttttagagtttttaaacgataagcaaattaattatgaatt 32964206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 224 - 417
Target Start/End: Original strand, 15541743 - 15541935
Alignment:
Q  224 atttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatactcactggtcaaatttcgttccctaatcttataagca 323  Q
    ||||||||| |||||  |||||||| |||||||| || || ||||||||  | ||||| ||||||||   ||||||||  |||||||||| || ||  ||    
T  15541743 atttattttaattttccaacaaaaatgtgcaaaattttaa-ttttgttcacattaagcatatactcaggagtcaaattatgttccctaattttgtataca 15541841  T
Q  324 tggttagaacataataagaatcttcacaatgaagttttgcagtttttaaacgagagacaaattaattataaattgtttaagtaattcataatta 417  Q
    ||||||||||||| |||||| |||||| || || ||| | ||||| ||||| |||||| |||  ||||| ||||||||||  ||||||| ||||    
T  15541842 tggttagaacatagtaagaaccttcaccattaaatttgggagtttctaaacaagagacgaatcgattatgaattgtttaaaaaattcatgatta 15541935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 19 - 88
Target Start/End: Original strand, 14161331 - 14161397
Alignment:
Q  19 cttgcaggttgaagggtgactgagaagaagaagcttgtgtgaacattggagaagatgaacataaagttaa 88  Q
    ||||||||||||||||||| ||||||   |||||||||||||||||| |||||||||||||||| |||||    
T  14161331 cttgcaggttgaagggtgattgagaa---gaagcttgtgtgaacattagagaagatgaacataacgttaa 14161397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 328 - 394
Target Start/End: Complemental strand, 36409086 - 36409020
Alignment:
Q  328 tagaacataataagaatcttcacaatgaagttttgcagtttttaaacgagagacaaattaattataa 394  Q
    |||||||| || |||| |||||||||||| ||||| ||||||||||||||| |||||||||||||||    
T  36409086 tagaacatgattagaaccttcacaatgaaattttgtagtttttaaacgagatacaaattaattataa 36409020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 180 - 395
Target Start/End: Original strand, 29892039 - 29892250
Alignment:
Q  180 taaaaacaatttgcaaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaa 279  Q
    |||||| |||||||||| |||| ||||||||||| || | || ||||  ||||||||||  ||| |||| ||||  |||||| |||||||||   |||||    
T  29892039 taaaaagaatttgcaaaattttgtagcatttcaaagatg-tttaatt--tttttatttttcaaccaaaacgtgc-gaaattgcaattttgttatgagtaa 29892134  T
Q  280 gcgtatactcactggtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatgaagttttgcagtttttaaacgagag 379  Q
      |||||||||| ||||||||||| ||| ||||| || ||||||||  || ||||| |||||||  |||    |||| ||||  |||||||||||||||     
T  29892135 atgtatactcacgggtcaaatttctttctctaattttctaagcatgtatataacatcataagaactttcctcgtgaatttttagagtttttaaacgagat 29892234  T
Q  380 acaaattaattataaa 395  Q
    || |||||||||||||    
T  29892235 acgaattaattataaa 29892250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 118 - 187
Target Start/End: Complemental strand, 20178432 - 20178363
Alignment:
Q  118 aaaaataaaggacgaaaacgttacctaaaaataagttatgggaccatttctgtaattttgcctaaaaaca 187  Q
    |||||||||||||||||  ||||||||||| ||||||| ||||| | || ||||||||||||| ||||||    
T  20178432 aaaaataaaggacgaaagtgttacctaaaattaagttaagggactaattgtgtaattttgccttaaaaca 20178363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 118 - 187
Target Start/End: Complemental strand, 20223160 - 20223091
Alignment:
Q  118 aaaaataaaggacgaaaacgttacctaaaaataagttatgggaccatttctgtaattttgcctaaaaaca 187  Q
    |||||||||||||||||  ||||||||||| ||||||| ||||| | || ||||||||||||| ||||||    
T  20223160 aaaaataaaggacgaaagtgttacctaaaattaagttaagggactaattgtgtaattttgccttaaaaca 20223091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 221 - 350
Target Start/End: Complemental strand, 33639282 - 33639154
Alignment:
Q  221 tcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatactcactggtcaaatttcgttccctaatcttataa 320  Q
    |||||||||||| |||||  ||| |||| |||| ||||||| ||||||  ||| ||||||| |||||||||   |||||||| |||||||||| || ||     
T  33639282 tcaatttattttgatttttcaaccaaaacgtgc-aaaattgcaatttttctccaagtaagcatatactcacacatcaaattttgttccctaattttgtag 33639184  T
Q  321 gcatggttagaacataataagaatcttcac 350  Q
    ||||||||| ||||| ||| |||| |||||    
T  33639183 gcatggttacaacattataggaatattcac 33639154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 352 - 415
Target Start/End: Complemental strand, 32750434 - 32750371
Alignment:
Q  352 atgaagttttgcagtttttaaacgagagacaaattaattataaattgtttaagtaattcataat 415  Q
    ||||| ||||| ||||||||||||||| || |||||||||| ||||||||| | ||||||||||    
T  32750434 atgaaattttggagtttttaaacgagatacgaattaattatgaattgtttatgaaattcataat 32750371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 338 - 419
Target Start/End: Original strand, 3672247 - 3672327
Alignment:
Q  338 taagaatcttcacaatgaagttttgcagtttttaaacgagagacaaattaattataaattgtttaagtaattcataattatg 419  Q
    |||||| |||||| ||||| ||| | |||||||||| ||  ||| |||||||||| ||||||||||| ||||||||||||||    
T  3672247 taagaaccttcaccatgaaatttgg-agtttttaaatgaatgacgaattaattatgaattgtttaaggaattcataattatg 3672327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 122 - 185
Target Start/End: Original strand, 14577154 - 14577217
Alignment:
Q  122 ataaaggacgaaaacgttacctaaaaataagttatgggaccatttctgtaattttgcctaaaaa 185  Q
    |||||||||||||  |||||||||||  |||||| ||||| | || ||||||||||||||||||    
T  14577154 ataaaggacgaaagtgttacctaaaataaagttaagggactaattgtgtaattttgcctaaaaa 14577217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 358 - 409
Target Start/End: Original strand, 15863285 - 15863336
Alignment:
Q  358 ttttgcagtttttaaacgagagacaaattaattataaattgtttaagtaatt 409  Q
    ||||| ||||||||||||||| || |||||||||| ||||||||||| ||||    
T  15863285 ttttggagtttttaaacgagatacgaattaattatgaattgtttaagaaatt 15863336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 194 - 340
Target Start/End: Complemental strand, 17480101 - 17479956
Alignment:
Q  194 aaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatactcactg 293  Q
    |||||||||||||||||||   | | || |||||||||| |||||  ||| |||| |||  ||||||| |||||| |||  ||||| | |||||||||      
T  17480101 aaagttttatagcatttcataaaagcttgaatttattttgatttttcaaccaaaatgtg-taaaattgcaattttcttctgagtaaacatatactcacga 17480003  T
Q  294 gtcaaatttcgttccctaatcttataagcatggttagaacataataa 340  Q
    ||||||||| |||||||||| || || |||| ||| |||||| ||||    
T  17480002 gtcaaattttgttccctaattttgtaggcatagttggaacatcataa 17479956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 121 - 183
Target Start/End: Complemental strand, 30928371 - 30928309
Alignment:
Q  121 aataaaggacgaaaacgttacctaaaaataagttatgggaccatttctgtaattttgcctaaa 183  Q
    |||||||||| |||| ||||||||||| ||||||| ||||| | || |||||||||| |||||    
T  30928371 aataaaggacaaaaatgttacctaaaattaagttaagggactaattgtgtaattttgtctaaa 30928309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 122 - 184
Target Start/End: Original strand, 35482990 - 35483052
Alignment:
Q  122 ataaaggacgaaaacgttacctaaaaataagttatgggaccatttctgtaattttgcctaaaa 184  Q
    |||||||||||||  |||||||||||  |||||| ||||| | || |||||||||||||||||    
T  35482990 ataaaggacgaaagtgttacctaaaataaagttaagggactaattgtgtaattttgcctaaaa 35483052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 120 - 177
Target Start/End: Original strand, 17844167 - 17844224
Alignment:
Q  120 aaataaaggacgaaaacgttacctaaaaataagttatgggaccatttctgtaattttg 177  Q
    |||||||||||||||  ||||||||||| ||||||| ||||| | || ||||||||||    
T  17844167 aaataaaggacgaaagtgttacctaaaattaagttaagggactaattgtgtaattttg 17844224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 122 - 179
Target Start/End: Original strand, 30928601 - 30928658
Alignment:
Q  122 ataaaggacgaaaacgttacctaaaaataagttatgggaccatttctgtaattttgcc 179  Q
    |||||||||||||  ||||||||||| ||||||| ||||| | || ||||||||||||    
T  30928601 ataaaggacgaaagtgttacctaaaattaagttaagggactaattgtgtaattttgcc 30928658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 122 - 182
Target Start/End: Original strand, 27912386 - 27912446
Alignment:
Q  122 ataaaggacgaaaacgttacctaaaaataagttatgggaccatttctgtaattttgcctaa 182  Q
    |||||||||||||  |||||||||||  |||||| ||||| | || |||||||||||||||    
T  27912386 ataaaggacgaaagtgttacctaaaataaagttaagggactaattgtgtaattttgcctaa 27912446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 122 - 182
Target Start/End: Original strand, 27958805 - 27958865
Alignment:
Q  122 ataaaggacgaaaacgttacctaaaaataagttatgggaccatttctgtaattttgcctaa 182  Q
    |||||||||||||  |||||||||||  |||||| ||||| | || |||||||||||||||    
T  27958805 ataaaggacgaaagtgttacctaaaataaagttaagggactaattgtgtaattttgcctaa 27958865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 105; Significance: 3e-52; HSPs: 26)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 188 - 419
Target Start/End: Original strand, 41971746 - 41971977
Alignment:
Q  188 atttgcaaagttttatagcatttcaatgacgattcaatttatttttattttaaaac-aaaaaggtgcaaaaattgaaattttgttcctagtaagcgtata 286  Q
    ||||| |||||||||||||||||||| | || || |||||||||| |||||  ||| ||||| |||||||| ||||||||||||||   |||||||||||    
T  41971746 atttgtaaagttttatagcatttcaaagtcgtttaaatttattttgatttttcaaccaaaaacgtgcaaaa-ttgaaattttgttcagcgtaagcgtata 41971844  T
Q  287 ctcactggtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatgaagttttgcagtttttaaacgagagacaaatt 386  Q
    ||||| ||||||||||  ||||||||| || || |||||  |||||||| ||||||| |||||||||||| ||||| ||||||||||||||  | |||||    
T  41971845 ctcacaggtcaaatttaattccctaattttgtaggcatgactagaacatgataagaaccttcacaatgaaattttgtagtttttaaacgaggtataaatt 41971944  T
Q  387 aattataaattgtttaagtaattcataattatg 419  Q
    |||||||||||||||||| ||||||||||||||    
T  41971945 aattataaattgtttaagaaattcataattatg 41971977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 188 - 419
Target Start/End: Complemental strand, 3829659 - 3829430
Alignment:
Q  188 atttgcaaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatac 287  Q
    ||||| ||||||| |||||||||| | | || || |||||||||| |||||  ||| |||| |||||||| |||||||||||||||  ||||||||||||    
T  3829659 atttgtaaagtttcatagcatttcgaagtcgtttaaatttattttgatttttcaaccaaaacgtgcaaaa-ttgaaattttgttccgcgtaagcgtatac 3829561  T
Q  288 tcactggtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatgaagttttgcagtttttaaacgagagacaaatta 387  Q
    ||||  ||||||||| |||||||||  || || |||||  |||||||| ||||||| ||||||||||||  |||| ||||||||||||||| ||||||||    
T  3829560 tcacaagtcaaatttagttccctaactttgtaggcatgactagaacatgataagaaccttcacaatgaa-atttgtagtttttaaacgagatacaaatta 3829462  T
Q  388 attataaattgtttaagtaattcataattatg 419  Q
    ||||||||||||||||| ||||||||||||||    
T  3829461 attataaattgtttaagaaattcataattatg 3829430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 194 - 419
Target Start/End: Original strand, 11957845 - 11958069
Alignment:
Q  194 aaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatactcactg 293  Q
    ||||||| |||||||||| | | || || |||||||||| |||||  |||||||| |||||||| ||| |||||||||||   |||||||||||||||      
T  11957845 aaagtttcatagcatttcgaagtcgtttaaatttattttgatttttcaacaaaaacgtgcaaaa-ttgcaattttgttccgcataagcgtatactcacaa 11957943  T
Q  294 gtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatgaagttttgcagtttttaaacgagagacaaattaattata 393  Q
    ||||||||   ||| ||||| || || ||||| ||||||||| ||||||| |||||||||||| ||||| ||||||||||||||| ||||||||||||||    
T  11957944 gtcaaattcaattcactaattttctaggcatgattagaacatgataagaaccttcacaatgaaattttgtagtttttaaacgagatacaaattaattata 11958043  T
Q  394 aattgtttaagtaattcataattatg 419  Q
    |||| |||||| ||||||||||||||    
T  11958044 aattatttaagaaattcataattatg 11958069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 194 - 417
Target Start/End: Complemental strand, 35908199 - 35907977
Alignment:
Q  194 aaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatactcactg 293  Q
    ||||||| |||||||||| |   || || |||||||| | |||||  ||| |||| |||||||| |||||||||||||||  ||||||||||||||||      
T  35908199 aaagtttcatagcatttcgaaatcgtttaaatttattatgatttttcaaccaaaacgtgcaaaa-ttgaaattttgttccgcgtaagcgtatactcacaa 35908101  T
Q  294 gtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatgaagttttgcagtttttaaacgagagacaaattaattata 393  Q
    ||||||||| |||||||||| || || |||||  |||||||| ||||||| ||||||| |||| ||||| ||| ||||||||||| ||||||||||||||    
T  35908100 gtcaaatttagttccctaattttgtatgcatgactagaacatgataagaaccttcacagtgaaattttgtagtctttaaacgagatacaaattaattata 35908001  T
Q  394 aattgtttaagtaattcataatta 417  Q
    ||||||||||| ||||||||||||    
T  35908000 aattgtttaagaaattcataatta 35907977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 194 - 419
Target Start/End: Complemental strand, 17445965 - 17445741
Alignment:
Q  194 aaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatactcactg 293  Q
    ||||||| ||| |||||| | | || || |||||||||| |||||  ||| ||||  ||||||| |||||||||||||||  ||||||||||||||||      
T  17445965 aaagtttcataacatttcgaagtcgtttaaatttattttgatttttcaaccaaaacttgcaaaa-ttgaaattttgttccgcgtaagcgtatactcacaa 17445867  T
Q  294 gtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatgaagttttgcagtttttaaacgagagacaaattaattata 393  Q
    ||||||||| ||||| |||| || || |||||  |||||||| ||||||| ||||| |||||| ||||| ||| ||||||||||| ||||||||||||||    
T  17445866 gtcaaatttagttccttaattttgtaggcatgactagaacatgataagaaccttcataatgaaattttgtagtctttaaacgagatacaaattaattata 17445767  T
Q  394 aattgtttaagtaattcataattatg 419  Q
    ||||||||||| ||||||||||||||    
T  17445766 aattgtttaagaaattcataattatg 17445741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 255 - 419
Target Start/End: Complemental strand, 7434033 - 7433869
Alignment:
Q  255 aaaattgaaattttgttcctagtaagcgtatactcactggtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatg 354  Q
    |||||||||||||||||||  ||||||||||||||||  ||||||||| |||||||||| || || |||||  |||||||| | ||||| ||||||||||    
T  7434033 aaaattgaaattttgttccgcgtaagcgtatactcacaagtcaaatttagttccctaattttgtaggcatgactagaacatgacaagaaccttcacaatg 7433934  T
Q  355 aagttttgcagtttttaaacgagagacaaattaattataaattgtttaagtaattcataattatg 419  Q
    || ||||| | ||||||||||||| ||||||||||||||||||||| ||| ||||||||||||||    
T  7433933 aaattttgtaatttttaaacgagatacaaattaattataaattgttaaagaaattcataattatg 7433869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 255 - 419
Target Start/End: Original strand, 42310495 - 42310659
Alignment:
Q  255 aaaattgaaattttgttcctagtaagcgtatactcactggtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatg 354  Q
    ||||||||||||||||| |  ||||||||||||||||  ||||||||| |||||||||| || || |||||  |||||||| ||||||| ||||||||||    
T  42310495 aaaattgaaattttgtttcgcgtaagcgtatactcacaagtcaaatttagttccctaattttgtaggcatgactagaacatgataagaaccttcacaatg 42310594  T
Q  355 aagttttgcagtttttaaacgagagacaaattaattataaattgtttaagtaattcataattatg 419  Q
    || ||||| | ||||||||| ||| ||||||||||||||||||||||||| ||||||||||||||    
T  42310595 aaattttgtaatttttaaactagatacaaattaattataaattgtttaagaaattcataattatg 42310659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 194 - 419
Target Start/End: Original strand, 32981551 - 32981775
Alignment:
Q  194 aaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatactcactg 293  Q
    ||||||| |||||||||| | | || || |||||||||| |||||  |||||||| |||||||| |||||||||||||||  |||||| | |||||||      
T  32981551 aaagtttcatagcatttcgaagtcgtttaaatttattttgatttttcaacaaaaacgtgcaaaa-ttgaaattttgttccgcgtaagcatttactcacaa 32981649  T
Q  294 gtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatgaagttttgcagtttttaaacgagagacaaattaattata 393  Q
    ||||||||| |||||| ||| || || |||||  |||||||| ||||||| ||||||||| || ||||  | ||||| ||||||| ||||||||||||||    
T  32981650 gtcaaatttagttcccaaattttgtaggcatgactagaacatgataagaaccttcacaataaaattttataatttttcaacgagatacaaattaattata 32981749  T
Q  394 aattgtttaagtaattcataattatg 419  Q
    ||||||||||| ||||||||||||||    
T  32981750 aattgtttaagaaattcataattatg 32981775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 255 - 418
Target Start/End: Complemental strand, 23313606 - 23313443
Alignment:
Q  255 aaaattgaaattttgttcctagtaagcgtatactcactggtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatg 354  Q
    ||||||||||||||||||   |||||||||||||||   ||||||||| |||||||||| || || |||||  |||||||| ||||||| ||||||||||    
T  23313606 aaaattgaaattttgttctgcgtaagcgtatactcataagtcaaatttagttccctaattttgtaggcatgactagaacatgataagaaccttcacaatg 23313507  T
Q  355 aagttttgcagtttttaaacgagagacaaattaattataaattgtttaagtaattcataattat 418  Q
    || ||||| | ||||||||||||| ||||||||||||||||||||||||  |||||||||||||    
T  23313506 aaattttgtaatttttaaacgagatacaaattaattataaattgtttaataaattcataattat 23313443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 276 - 419
Target Start/End: Complemental strand, 33490296 - 33490153
Alignment:
Q  276 gtaagcgtatactcactggtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatgaagttttgcagtttttaaacg 375  Q
    |||||||||||| | |  ||||||||| |||||||||| || || |||||  |||||||| |||| || |||||||||||| ||||| ||||||||||||    
T  33490296 gtaagcgtatacccgcaagtcaaatttagttccctaattttgtaggcatgactagaacatgataataaccttcacaatgaaattttgtagtttttaaacg 33490197  T
Q  376 agagacaaattaattataaattgtttaagtaattcataattatg 419  Q
    ||| || |||||||||||||||||||||| ||||||||||||||    
T  33490196 agatacgaattaattataaattgtttaagaaattcataattatg 33490153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 220 - 418
Target Start/End: Complemental strand, 28463582 - 28463396
Alignment:
Q  220 ttcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatactcactggtcaaatttcgttccctaatcttata 319  Q
    ||||||||||||| |||||  ||| ||||  ||||||| ||||||||||||||| | ||||||||||||||| ||||||| ||  ||||||||| ||  |    
T  28463582 ttcaatttattttgatttttcaaccaaaacatgcaaaa-ttgaaattttgttccgaataagcgtatactcacaggtcaaaattaattccctaattttgca 28463484  T
Q  320 agcatggttagaacataataagaatcttcacaatgaagttttgcagtttttaaacgagagacaaattaattataaattgtttaagtaattcataattat 418  Q
     |||||  ||||||           |||||||||||| ||||| ||||||||||||| | ||||||||||||||||||||||||| |||||||||||||    
T  28463483 ggcatgactagaac-----------cttcacaatgaaattttgtagtttttaaacgaaatacaaattaattataaattgtttaagaaattcataattat 28463396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 275 - 417
Target Start/End: Complemental strand, 32944499 - 32944357
Alignment:
Q  275 agtaagcgtatactcactggtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatgaagttttgcagtttttaaac 374  Q
    ||||||| ||||||||||| |||||||| |||||||||| ||||||||||| ||||||||| |||||||  ||||| ||||||||||| ||||||   |     
T  32944499 agtaagcatatactcactgatcaaattttgttccctaattttataagcatgcttagaacatcataagaacattcaccatgaagttttggagttttcggaa 32944400  T
Q  375 gagagacaaattaattataaattgtttaagtaattcataatta 417  Q
    | |  |  |||||||||| ||||||||||| ||||||||||||    
T  32944399 gtggaaataattaattatgaattgtttaagaaattcataatta 32944357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 263 - 397
Target Start/End: Original strand, 5715373 - 5715507
Alignment:
Q  263 aattttgttcctagtaagcgtatactcactggtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatgaagttttg 362  Q
    ||||||||||| ||||||  |||| ||||||||||||||| ||||  |||| || || ||||||||| ||||| ||||||| |||||| || || |||||    
T  5715373 aattttgttccgagtaagtatatattcactggtcaaattttgttctataattttgtaggcatggttaaaacatcataagaaacttcaccataaaattttg 5715472  T
Q  363 cagtttttaaacgagagacaaattaattataaatt 397  Q
     | ||||||||||||| || |||||||||| ||||    
T  5715473 gaatttttaaacgagatacgaattaattatgaatt 5715507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 296 - 371
Target Start/End: Original strand, 7350228 - 7350303
Alignment:
Q  296 caaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatgaagttttgcagttttta 371  Q
    |||||||||||| ||||| || ||||||||||||||| || |||||||||||||| ||||| ||||  ||||||||    
T  7350228 caaatttcgttcactaattttgtaagcatggttagaatatcataagaatcttcaccatgaaattttagagttttta 7350303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 358 - 420
Target Start/End: Complemental strand, 33774691 - 33774629
Alignment:
Q  358 ttttgcagtttttaaacgagagacaaattaattataaattgtttaagtaattcataattatgg 420  Q
    |||||||||||||||||| ||||| |||| ||||| ||||||||||| | |||||||||||||    
T  33774691 ttttgcagtttttaaacgggagacgaatttattatgaattgtttaagaagttcataattatgg 33774629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 275 - 416
Target Start/End: Original strand, 18716322 - 18716463
Alignment:
Q  275 agtaagcgtatactcactggtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatgaagttttgcagtttttaaac 374  Q
    ||||||| |||| |||| ||||||||||  ||||||||| |||||  |||||||||||||| ||||||| |||||  || || ||||      |||||||    
T  18716322 agtaagcatatattcacgggtcaaattttattccctaattttatagacatggttagaacatcataagaaccttcaacataaaatttttagagatttaaac 18716421  T
Q  375 gagagacaaattaattataaattgtttaagtaattcataatt 416  Q
     ||||   |||||||||| ||||||||||| |||||||||||    
T  18716422 aagaggtgaattaattatgaattgtttaagaaattcataatt 18716463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 255 - 418
Target Start/End: Complemental strand, 3604863 - 3604699
Alignment:
Q  255 aaaattgaaattttgttcctagtaagcgtatactcactggtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatg 354  Q
    |||||||  |||||||| | ||||||  ||||||||  ||||||||||  ||||||||| || || ||||||||||||||| |||| ||   || | | |    
T  3604863 aaaattgctattttgtttcgagtaagtatatactcaagggtcaaattttattccctaattttgtaggcatggttagaacatcataaaaacggtcgccacg 3604764  T
Q  355 -aagttttgcagtttttaaacgagagacaaattaattataaattgtttaagtaattcataattat 418  Q
     || ||||| ||||||||||||| | |||||||||| || ||| ||||||| |||||||| ||||    
T  3604763 aaaattttggagtttttaaacgaaaaacaaattaataattaatagtttaagaaattcatagttat 3604699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 122 - 182
Target Start/End: Original strand, 12115240 - 12115300
Alignment:
Q  122 ataaaggacgaaaacgttacctaaaaataagttatgggaccatttctgtaattttgcctaa 182  Q
    |||||||||||||| ||||||||||| ||||||| ||||| | || |||||||||||||||    
T  12115240 ataaaggacgaaaatgttacctaaaattaagttaagggactaattgtgtaattttgcctaa 12115300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 255 - 350
Target Start/End: Complemental strand, 42412464 - 42412370
Alignment:
Q  255 aaaattgaaattttgttcctagtaagcgtatactcactggtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcac 350  Q
    ||||||| ||||||||||| | || |||||||||||| |||||||||||||| ||||||  | ||   ||||||| ||||| ||||||||||||||    
T  42412464 aaaattgcaattttgttccgaata-gcgtatactcacaggtcaaatttcgtttcctaattctgtagatatggttaaaacatcataagaatcttcac 42412370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 188 - 397
Target Start/End: Complemental strand, 17744802 - 17744594
Alignment:
Q  188 atttgcaaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatac 287  Q
    ||||| ||| ||| |||||||||||| ||   ||| |||||||||||||||  | | |||| |||| ||| ||| |||| | |||  ||||||| |||||    
T  17744802 atttgaaaaatttcatagcatttcaaagatttttcgatttatttttattttttagccaaaacgtgcgaaa-ttgcaattctattcagagtaagcatatac 17744704  T
Q  288 tcactggtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatgaagttttgcagtttttaaacgagagacaaatta 387  Q
    | || |||||||||| ||||  |||| || || | ||||||||||||| ||||||| |||||  ||||| ||||| | |||| ||| |||| |  |||||    
T  17744703 tgacgggtcaaattttgttctataattttgtaggaatggttagaacatcataagaaacttcaacatgaaattttggaattttaaaatgagatatgaatta 17744604  T
Q  388 attataaatt 397  Q
    ||||| ||||    
T  17744603 attatgaatt 17744594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 118 - 181
Target Start/End: Complemental strand, 7113926 - 7113863
Alignment:
Q  118 aaaaataaaggacgaaaacgttacctaaaaataagttatgggaccatttctgtaattttgccta 181  Q
    |||||||||||||||||  |||||||||||  |||||| ||||| | || ||||||||||||||    
T  7113926 aaaaataaaggacgaaagtgttacctaaaataaagttaagggactaattgtgtaattttgccta 7113863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 122 - 185
Target Start/End: Complemental strand, 19897233 - 19897170
Alignment:
Q  122 ataaaggacgaaaacgttacctaaaaataagttatgggaccatttctgtaattttgcctaaaaa 185  Q
    |||||||||||||| ||||||||||| ||||||| ||||| | || | |||||||||| |||||    
T  19897233 ataaaggacgaaaatgttacctaaaattaagttaagggactaattgtataattttgccaaaaaa 19897170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 125 - 180
Target Start/End: Original strand, 40290073 - 40290128
Alignment:
Q  125 aaggacgaaaacgttacctaaaaataagttatgggaccatttctgtaattttgcct 180  Q
    ||||||||||| ||||||||||| ||||||| ||||| | || |||||||||||||    
T  40290073 aaggacgaaaatgttacctaaaattaagttaagggactaattatgtaattttgcct 40290128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 378 - 420
Target Start/End: Original strand, 9901670 - 9901712
Alignment:
Q  378 agacaaattaattataaattgtttaagtaattcataattatgg 420  Q
    ||||||||||||||| |||| |||||| |||||||||||||||    
T  9901670 agacaaattaattatgaattatttaagaaattcataattatgg 9901712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 122 - 184
Target Start/End: Original strand, 17611713 - 17611775
Alignment:
Q  122 ataaaggacgaaaacgttacctaaaaataagttatgggaccatttctgtaattttgcctaaaa 184  Q
    |||||||||||||  |||||||||||  |||||| ||||| | || |||||||||||||||||    
T  17611713 ataaaggacgaaagtgttacctaaaataaagttaagggactaattatgtaattttgcctaaaa 17611775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 118 - 184
Target Start/End: Original strand, 25780173 - 25780239
Alignment:
Q  118 aaaaataaaggacgaaaacgttacctaaaaataagttatgggaccatttctgtaattttgcctaaaa 184  Q
    |||||||||||||||||  |||||||||||  |||||| ||||| | || ||||||||| |||||||    
T  25780173 aaaaataaaggacgaaagtgttacctaaaataaagttaagggactaattgtgtaattttacctaaaa 25780239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 102; Significance: 2e-50; HSPs: 57)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 194 - 419
Target Start/End: Original strand, 3292392 - 3292616
Alignment:
Q  194 aaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatactcactg 293  Q
    ||||||| |||||||||| | | ||||| |||||||| | |||||  ||| |||| ||| |||| |||||||||||||||  ||||||||||||||||      
T  3292392 aaagtttcatagcatttcgaagtcgattaaatttattatgatttttcaaccaaaacgtggaaaa-ttgaaattttgttccgcgtaagcgtatactcacaa 3292490  T
Q  294 gtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatgaagttttgcagtttttaaacgagagacaaattaattata 393  Q
    ||||||||| |||||||||| || || ||||| ||||||||| ||||||| ||||||| |||| ||||| ||| ||||||||||| ||||||||||||||    
T  3292491 gtcaaatttagttccctaattttgtaggcatgattagaacatgataagaaccttcacagtgaaattttgtagtctttaaacgagatacaaattaattata 3292590  T
Q  394 aattgtttaagtaattcataattatg 419  Q
    ||||||||||| ||||||||||||||    
T  3292591 aattgtttaagaaattcataattatg 3292616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 194 - 419
Target Start/End: Original strand, 28876810 - 28877034
Alignment:
Q  194 aaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatactcactg 293  Q
    ||||||| |||||||||||| | || || |||||||||| |||||  ||| |||| |||||||| |||||||||||||||  |||||| |||||||||      
T  28876810 aaagtttcatagcatttcaaagtcgtttaaatttattttgatttttcaaccaaaacgtgcaaaa-ttgaaattttgttccgcgtaagcttatactcacaa 28876908  T
Q  294 gtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatgaagttttgcagtttttaaacgagagacaaattaattata 393  Q
    ||||||||| |||||||||| || || |||||  |||||||| ||||||| |||||||||||| ||||| ||| ||||||||||| | ||||||||||||    
T  28876909 gtcaaatttagttccctaattttgtaggcatgactagaacatgataagaaccttcacaatgaaattttgtagtctttaaacgagatagaaattaattata 28877008  T
Q  394 aattgtttaagtaattcataattatg 419  Q
    ||||||||||| ||||||||||||||    
T  28877009 aattgtttaagaaattcataattatg 28877034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 194 - 419
Target Start/End: Complemental strand, 6236181 - 6235957
Alignment:
Q  194 aaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatactcactg 293  Q
    ||||||| |||||||||| | |  | || |||||||||| |||||  |||  ||| |||||||| |||||||||||||||  ||||||||||||||||      
T  6236181 aaagtttcatagcatttcgaagtggtttaaatttattttgatttttcaactgaaacgtgcaaaa-ttgaaattttgttccgcgtaagcgtatactcacaa 6236083  T
Q  294 gtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatgaagttttgcagtttttaaacgagagacaaattaattata 393  Q
    ||||||||| |||||||||| || || |||||  |||||||| ||||||| |||||||||||| ||||| | ||||||||||||| ||||||||||||||    
T  6236082 gtcaaatttagttccctaattttgtaggcatgactagaacatgataagaaccttcacaatgaaattttgtaatttttaaacgagatacaaattaattata 6235983  T
Q  394 aattgtttaagtaattcataattatg 419  Q
    ||||||||||| ||||||||||||||    
T  6235982 aattgtttaagaaattcataattatg 6235957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 194 - 419
Target Start/End: Original strand, 6689731 - 6689955
Alignment:
Q  194 aaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatactcactg 293  Q
    ||||||| |||||||||| | | ||||| |||||||| | |||||  ||| |||| ||| |||| |||||||||||||||  ||||||||||||||||      
T  6689731 aaagtttcatagcatttcgaagtcgattaaatttattatgatttttcaaccaaaacgtggaaaa-ttgaaattttgttccgcgtaagcgtatactcacaa 6689829  T
Q  294 gtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatgaagttttgcagtttttaaacgagagacaaattaattata 393  Q
    |||||||||  ||||||||| || || ||||| ||||||||| ||||||| ||||||| |||| ||||| ||| |||||||||||  |||||||||||||    
T  6689830 gtcaaatttaattccctaattttgtaggcatgattagaacatgataagaaccttcacagtgaaattttgtagtctttaaacgagattcaaattaattata 6689929  T
Q  394 aattgtttaagtaattcataattatg 419  Q
    ||||||||||| ||||||||||||||    
T  6689930 aattgtttaagaaattcataattatg 6689955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 223 - 419
Target Start/End: Original strand, 29995507 - 29995703
Alignment:
Q  223 aatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatactcactggtcaaatttcgttccctaatcttataagc 322  Q
    |||||||||| |||||  ||| |||| |||||||| |||||||||||||||  ||||| ||||||||||  ||||||||| |||||||||| || || ||    
T  29995507 aatttattttgatttttcaaccaaaacgtgcaaaa-ttgaaattttgttccgcgtaagtgtatactcacaagtcaaatttagttccctaattttgtaggc 29995605  T
Q  323 atggttagaacataataagaatcttcacaatgaagttttgcagtttttaaacgagagacaaattaattataaatt-gtttaagtaattcataattatg 419  Q
    |||  |||||||| ||||||| |||||||||||| ||||| ||||||||||||||| ||||||||||||||| || ||||||| ||||||||||||||    
T  29995606 atgactagaacatgataagaaccttcacaatgaaattttgtagtttttaaacgagatacaaattaattataagttagtttaagaaattcataattatg 29995703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 194 - 419
Target Start/End: Original strand, 43143080 - 43143304
Alignment:
Q  194 aaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatactcactg 293  Q
    ||||||| |||||||||| | | || |  |||||||| | |||||  ||| |||| |||||||| |||||||||||||||  ||||||||||||||||      
T  43143080 aaagtttcatagcatttcgaagtcgttaaaatttattatgatttttcaaccaaaacgtgcaaaa-ttgaaattttgttccgcgtaagcgtatactcacaa 43143178  T
Q  294 gtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatgaagttttgcagtttttaaacgagagacaaattaattata 393  Q
    ||||||||| |||||||||| || || |||||  |||| ||| ||||||| ||||||| |||| ||||| ||| ||||||||||| ||||||||||||||    
T  43143179 gtcaaatttagttccctaattttgtaggcatgactagagcatgataagaaccttcacagtgaaattttgtagtctttaaacgagatacaaattaattata 43143278  T
Q  394 aattgtttaagtaattcataattatg 419  Q
    ||||||||||| ||||||||||||||    
T  43143279 aattgtttaagaaattcataattatg 43143304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 188 - 419
Target Start/End: Complemental strand, 20129993 - 20129762
Alignment:
Q  188 atttgcaaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatac 287  Q
    ||||| ||||||| |||||||||| |   || || |||||||||| |||||  |||  ||| |||||||| |||||||||||||||  ||||||||||||    
T  20129993 atttgtaaagtttcatagcatttcgaaatcgttttaatttattttgatttttcaactgaaacgtgcaaaa-ttgaaattttgttccgcgtaagcgtatac 20129895  T
Q  288 tcactggtcaaatttcgttccctaatcttataagcatggttagaacataataagaatc-ttcacaatgaagttttgcagtttttaaacgagagacaaatt 386  Q
    ||||  ||||||||| |||||||||| || || |||||  |||||||| ||||||| | ||||||||||| ||||| |  |||||||||||| |||||||    
T  20129894 tcacaagtcaaatttagttccctaattttgtaggcatgactagaacatgataagaaacattcacaatgaaattttgtaaattttaaacgagatacaaatt 20129795  T
Q  387 aattataaattgtttaagtaattcataattatg 419  Q
    |||||||||||||||||| ||||||||||||||    
T  20129794 aattataaattgtttaagaaattcataattatg 20129762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 188 - 419
Target Start/End: Original strand, 26438766 - 26438997
Alignment:
Q  188 atttgcaaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatac 287  Q
    ||||| ||||||| |||||||||| |   || || |||||||||| |||||  |||  ||| |||||||| |||||||||||||||  ||||||||||||    
T  26438766 atttgtaaagtttcatagcatttcgaaatcgtttaaatttattttgatttttcaactgaaacgtgcaaaa-ttgaaattttgttccgcgtaagcgtatac 26438864  T
Q  288 tcactggtcaaatttcgttccctaatcttataagcatggttagaacataataagaatc-ttcacaatgaagttttgcagtttttaaacgagagacaaatt 386  Q
    ||||  ||||||||| |||||||||| || || |||||  |||||||| ||||||| | ||||||||||| ||||| |  |||||||||||| |||||||    
T  26438865 tcacaagtcaaatttagttccctaattttgtaggcatgactagaacatgataagaaacattcacaatgaaattttgtaaattttaaacgagatacaaatt 26438964  T
Q  387 aattataaattgtttaagtaattcataattatg 419  Q
    |||||||||||||||||| ||||||||||||||    
T  26438965 aattataaattgtttaagaaattcataattatg 26438997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 188 - 419
Target Start/End: Original strand, 34406771 - 34407002
Alignment:
Q  188 atttgcaaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatac 287  Q
    ||||| ||||||| |||||||||| |   || || |||||||||| |||||  |||  ||| |||||||| |||||||||||||||  ||||||||||||    
T  34406771 atttgtaaagtttcatagcatttcgaaatcgtttaaatttattttgatttttcaactgaaacgtgcaaaa-ttgaaattttgttccgcgtaagcgtatac 34406869  T
Q  288 tcactggtcaaatttcgttccctaatcttataagcatggttagaacataataagaatc-ttcacaatgaagttttgcagtttttaaacgagagacaaatt 386  Q
    ||||  ||||||||| |||||||||| || || |||||  |||||||| ||||||| | ||||||||||| ||||| |  |||||||||||| |||||||    
T  34406870 tcacaagtcaaatttagttccctaattttgtaggcatgactagaacatgataagaaacattcacaatgaaattttgtaaattttaaacgagatacaaatt 34406969  T
Q  387 aattataaattgtttaagtaattcataattatg 419  Q
    |||||||||||||||||| ||||||||||||||    
T  34406970 aattataaattgtttaagaaattcataattatg 34407002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 188 - 419
Target Start/End: Complemental strand, 43356584 - 43356353
Alignment:
Q  188 atttgcaaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatac 287  Q
    ||||| ||||||| |||||||||| |   || || |||||||||| |||||  |||  ||| |||||||| |||||||||||||||  ||||||||||||    
T  43356584 atttgtaaagtttcatagcatttcgaaatcgtttaaatttattttgatttttcaactgaaacgtgcaaaa-ttgaaattttgttccgcgtaagcgtatac 43356486  T
Q  288 tcactggtcaaatttcgttccctaatcttataagcatggttagaacataataagaatc-ttcacaatgaagttttgcagtttttaaacgagagacaaatt 386  Q
    ||||  ||||||||| |||||||||| || || |||||  |||||||| ||||||| | ||||||||||| ||||| |  |||||||||||| |||||||    
T  43356485 tcacaagtcaaatttagttccctaattttgtaggcatgactagaacatgataagaaacattcacaatgaaattttgtaaattttaaacgagatacaaatt 43356386  T
Q  387 aattataaattgtttaagtaattcataattatg 419  Q
    |||||||||||||||||| ||||||||||||||    
T  43356385 aattataaattgtttaagaaattcataattatg 43356353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 188 - 419
Target Start/End: Complemental strand, 47501453 - 47501222
Alignment:
Q  188 atttgcaaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatac 287  Q
    ||||| ||||||| |||||||||| |   || || |||||||||| |||||  |||  ||| |||||||| |||||||||||||||  ||||||||||||    
T  47501453 atttgtaaagtttcatagcatttcgaaatcgtttaaatttattttgatttttcaactgaaacgtgcaaaa-ttgaaattttgttccgcgtaagcgtatac 47501355  T
Q  288 tcactggtcaaatttcgttccctaatcttataagcatggttagaacataataagaatc-ttcacaatgaagttttgcagtttttaaacgagagacaaatt 386  Q
    ||||  ||||||||| |||||||||| || || |||||  |||||||| ||||||| | ||||||||||| ||||| |  |||||||||||| |||||||    
T  47501354 tcacaagtcaaatttagttccctaattttgtaggcatgactagaacatgataagaaacattcacaatgaaattttgtaaattttaaacgagatacaaatt 47501255  T
Q  387 aattataaattgtttaagtaattcataattatg 419  Q
    |||||||||||||||||| ||||||||||||||    
T  47501254 aattataaattgtttaagaaattcataattatg 47501222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 194 - 417
Target Start/End: Original strand, 33135940 - 33136162
Alignment:
Q  194 aaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatactcactg 293  Q
    ||||||| ||| |||||||| | || || || ||||||| |||||  ||| |||| |||||||| |||||||||||||||  |||| ||||||||||       
T  33135940 aaagtttcatatcatttcaaagtcgtttaaaattattttgatttttcaaccaaaacgtgcaaaa-ttgaaattttgttccgcgtaaacgtatactcataa 33136038  T
Q  294 gtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatgaagttttgcagtttttaaacgagagacaaattaattata 393  Q
    ||||||||| |||||||||| || || |||||  |||||||| ||||||| |||||||||||| ||| | ||||||||||| ||| ||||||||||||||    
T  33136039 gtcaaatttagttccctaattttgtaggcatgactagaacatgataagaaccttcacaatgaaatttcgtagtttttaaacaagatacaaattaattata 33136138  T
Q  394 aattgtttaagtaattcataatta 417  Q
    ||||||||||| ||||||||||||    
T  33136139 aattgtttaagaaattcataatta 33136162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 194 - 419
Target Start/End: Original strand, 42333270 - 42333495
Alignment:
Q  194 aaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatactcactg 293  Q
    ||||||| |||||||||| | | || || |||||||| | |||||  ||| |||| |||||||| |||||||||||||||  ||||||||||||||||      
T  42333270 aaagtttcatagcatttcgaagtcgtttaaatttattatgatttttcaaccaaaacgtgcaaaa-ttgaaattttgttccgcgtaagcgtatactcacaa 42333368  T
Q  294 gtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatgaagttttgcagtttttaaacgagagacaaattaattata 393  Q
    ||||||||| |||||||||| || || |||||  |||| ||| ||||||| ||||||| |||| ||||| ||| ||||||||||| ||||||||||||||    
T  42333369 gtcaaatttagttccctaattttgtaggcatgactagagcatgataagaaccttcacagtgaaattttgtagtctttaaacgagatacaaattaattata 42333468  T
Q  394 aattg-tttaagtaattcataattatg 419  Q
    ||||| |||||| ||||||||||||||    
T  42333469 aattgttttaagaaattcataattatg 42333495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 255 - 419
Target Start/End: Original strand, 10352439 - 10352604
Alignment:
Q  255 aaaattgaaattttgttcctagtaagcgtatactcactggtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatg 354  Q
    |||||||||||||||||||  ||||| ||||||||||  ||||||||| |||||||||| || || ||||| ||||||||| ||||||| ||||||||||    
T  10352439 aaaattgaaattttgttccgtgtaagtgtatactcacaagtcaaatttagttccctaattttgtaggcatgattagaacatgataagaaccttcacaatg 10352538  T
Q  355 aagttttgcagtttttaaacgagagacaaattaattataaatt-gtttaagtaattcataattatg 419  Q
    || ||||| | ||||||||||||| ||||||||||||||| || ||||||| ||||||||||||||    
T  10352539 aaattttgtactttttaaacgagatacaaattaattataagttagtttaagaaattcataattatg 10352604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 194 - 419
Target Start/End: Complemental strand, 25931381 - 25931157
Alignment:
Q  194 aaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatactcactg 293  Q
    ||||||| |||||||||| | | || || |||||||||| |||||  |||  ||| |||||||| |||||||||||||||  |||||||||| |||||      
T  25931381 aaagtttcatagcatttcgaagtcgtttaaatttattttgatttttcaactgaaacgtgcaaaa-ttgaaattttgttccgcgtaagcgtattctcacaa 25931283  T
Q  294 gtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatgaagttttgcagtttttaaacgagagacaaattaattata 393  Q
    ||||||||| |||||||||| || || |||||  || ||||| ||||||| ||||||| | || ||||| | ||||||||||||| ||||||||||||||    
T  25931282 gtcaaatttagttccctaattttgtaggcatgactaaaacatgataagaaccttcacagttaaattttgtaatttttaaacgagatacaaattaattata 25931183  T
Q  394 aattgtttaagtaattcataattatg 419  Q
    ||||||||||| ||||||||||||||    
T  25931182 aattgtttaagaaattcataattatg 25931157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 194 - 419
Target Start/End: Complemental strand, 35546623 - 35546400
Alignment:
Q  194 aaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatactcactg 293  Q
    ||||||| |||||||||| | | || || |||||||| | |||||  ||| |||| |||||||| |||||||||||||||  ||||||||||||||||      
T  35546623 aaagtttcatagcatttcgaagtcgtttaaatttattatgatttttcaaccaaaacgtgcaaaa-ttgaaattttgttccgcgtaagcgtatactcacaa 35546525  T
Q  294 gtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatgaagttttgcagtttttaaacgagagacaaattaattata 393  Q
    ||||||||| |||||||||| || || |||||  || ||||| ||||||| ||||||| |||| ||||| ||| ||||||||||| ||||||||||||||    
T  35546524 gtcaaatttagttccctaat-ttgtaggcatgactaaaacatgataagaaccttcacagtgaaattttgtagtctttaaacgagatacaaattaattata 35546426  T
Q  394 aattgtttaagtaattcataattatg 419  Q
    |||| |||||| ||||||||||||||    
T  35546425 aattatttaagaaattcataattatg 35546400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 188 - 419
Target Start/End: Complemental strand, 13012868 - 13012637
Alignment:
Q  188 atttgcaaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatac 287  Q
    ||||| ||||||| |||||||||| |   || || |||||||||| |||||  |||  ||| |||||||| |||||||||||||||  ||||||||||||    
T  13012868 atttgtaaagtttcatagcatttcgaaatcgtttaaatttattttgatttttcaactgaaacgtgcaaaa-ttgaaattttgttccgcgtaagcgtatac 13012770  T
Q  288 tcactggtcaaatttcgttccctaatcttataagcatggttagaacataataagaatc-ttcacaatgaagttttgcagtttttaaacgagagacaaatt 386  Q
    ||||  ||||||||| |||||||||| || || |||||  |||||||| ||||||| | ||||||||||| ||||| |  |||||||||||| |||||||    
T  13012769 tcacaagtcaaatttagttccctaattttgtaggcatgactagaacatgataagaaacattcacaatgaaattttgtaaattttaaacgagatacaaatt 13012670  T
Q  387 aattataaattgtttaagtaattcataattatg 419  Q
    ||||||||||| |||||| ||||||||||||||    
T  13012669 aattataaattatttaagaaattcataattatg 13012637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 194 - 419
Target Start/End: Original strand, 17510723 - 17510951
Alignment:
Q  194 aaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatactcactg 293  Q
    ||||||| |||||||||| | | || ||||||||||||| |||||  |||  ||| |||||||| |||||||||||||||  ||||||||||||||||      
T  17510723 aaagtttcatagcatttcgaagtcgtttcaatttattttgatttttgaactgaaacgtgcaaaa-ttgaaattttgttccgcgtaagcgtatactcacaa 17510821  T
Q  294 gtcaaatttcgttccctaatcttataagcatggttagaacata----ataagaatcttcacaatgaagttttgcagtttttaaacgagagacaaattaat 389  Q
    ||||||||| |||||||||| || || | |||  ||||||| |    ||||||| |||||||||||| ||||  | ||||||||||||| ||||||||||    
T  17510822 gtcaaatttagttccctaattttgtaggtatgactagaacaaacatgataagaaccttcacaatgaaattttataatttttaaacgagatacaaattaat 17510921  T
Q  390 tataaattgtttaagtaattcataattatg 419  Q
    ||||||||||||||| ||||||||||||||    
T  17510922 tataaattgtttaagaaattcataattatg 17510951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 188 - 419
Target Start/End: Original strand, 36381836 - 36382065
Alignment:
Q  188 atttgcaaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatac 287  Q
    ||||| ||||||| |||||||||| |   || || |||||||||| |||||  |||  ||| |||||||| |||||||||| ||||  ||||||||||||    
T  36381836 atttgtaaagtttcatagcatttcgaattcgtttaaatttattttgatttttcaactgaaacgtgcaaaa-ttgaaattttattccgcgtaagcgtatac 36381934  T
Q  288 tcactggtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatgaagttttgcagtttttaaacgagagacaaatta 387  Q
    ||||  | ||||||| |||||||||| || || |||||  |||||||| ||||||| ||||||||| || ||||| | ||||||||||||| ||||||||    
T  36381935 tcacaag-caaatttagttccctaattttgtaggcatgactagaacatgataagaaccttcacaataaaattttgtaatttttaaacgagatacaaatta 36382033  T
Q  388 attataaattgtttaagtaattcataattatg 419  Q
    ||||||||||||||||| ||||||||||||||    
T  36382034 attataaattgtttaagaaattcataattatg 36382065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 194 - 419
Target Start/End: Complemental strand, 48990000 - 48989776
Alignment:
Q  194 aaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatactcactg 293  Q
    ||||||| |||||||||  | | || || |||||||||| |||||  ||| |||| |||| ||| |||||||||||||||  |||||||||||| |||      
T  48990000 aaagtttcatagcattttgaagtcgtttaaatttattttgatttttcaaccaaaacgtgccaaa-ttgaaattttgttccgcgtaagcgtatacccacaa 48989902  T
Q  294 gtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatgaagttttgcagtttttaaacgagagacaaattaattata 393  Q
    |||||||||  ||||||||| || || |||||  |||||||| ||||||| ||||||| |||| ||||  ||||||||||||||| |||||||||| |||    
T  48989901 gtcaaatttaattccctaattttgtaggcatgactagaacatgataagaaccttcacagtgaaattttttagtttttaaacgagatacaaattaatcata 48989802  T
Q  394 aattgtttaagtaattcataattatg 419  Q
    ||||||||||| ||||||||||||||    
T  48989801 aattgtttaagaaattcataattatg 48989776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 255 - 419
Target Start/End: Original strand, 30077191 - 30077356
Alignment:
Q  255 aaaattgaaattttgttcctagtaagcgtatactcactggtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatg 354  Q
    |||||||||||||||||||  ||||| ||||| ||||  ||||||||| |||||| ||| || || ||||| ||| ||||| ||||||| ||||||||||    
T  30077191 aaaattgaaattttgttccgcgtaagtgtatattcacaagtcaaatttagttcccaaattttgtaggcatgattataacatgataagaaccttcacaatg 30077290  T
Q  355 aagttttgcagtttttaaacgagagacaaattaattataaatt-gtttaagtaattcataattatg 419  Q
    || ||||| ||||||||||||||| ||||||||||||||| || ||||||| ||||||||||||||    
T  30077291 aaattttgtagtttttaaacgagatacaaattaattataagttagtttaagaaattcataattatg 30077356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 226 - 419
Target Start/End: Complemental strand, 48130617 - 48130425
Alignment:
Q  226 ttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatactcactggtcaaatttcgttccctaatcttataagcatg 325  Q
    ||||||| |||||  ||| |||| |||||||| |||||||||||||||  ||||||||||||||||  |||||| || |||||||||| || || |||      
T  48130617 ttattttgatttttcaaccaaaacgtgcaaaa-ttgaaattttgttccgcgtaagcgtatactcacaagtcaaaattagttccctaattttgtaggcaat 48130519  T
Q  326 gttagaacataataagaatcttcacaatgaagttttgcagtttttaaacgagagacaaattaattataaattgtttaagtaattcataattatg 419  Q
      |||||||| ||||||| ||||||||| || | ||| ||||||||||||| | ||||||||||||||||||||||||| ||||||||||||||    
T  48130518 actagaacatgataagaaccttcacaataaaatattgtagtttttaaacgacatacaaattaattataaattgtttaagaaattcataattatg 48130425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 220 - 418
Target Start/End: Original strand, 29134152 - 29134349
Alignment:
Q  220 ttcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatactcactggtcaaatttcgttccctaatcttata 319  Q
    |||||||||||||||||||  ||| |||| ||   ||||||||||||||||||||||||   |||||||||  |||||||||| |||| ||||| || ||    
T  29134152 ttcaatttatttttatttttcaaccaaaacgt-ttaaaattgaaattttgttcctagtatttgtatactcataggtcaaattttgttctctaattttgta 29134250  T
Q  320 agcatggttagaacataataagaatcttcacaatgaagttttgcagtttttaaacgagagacaaattaattataaattgtttaagtaattcataattat 418  Q
     ||| | |||||||||||||||||  ||||||||||| |||||| |||| |||||| || | ||||||||| ||||||| ||||| |||||||| ||||    
T  29134251 ggcaagattagaacataataagaaatttcacaatgaaattttgctgtttataaacgtgacaaaaattaattttaaattgattaagaaattcatagttat 29134349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 194 - 419
Target Start/End: Complemental strand, 30110634 - 30110410
Alignment:
Q  194 aaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatactcactg 293  Q
    ||||||| |||||||||| | | |  || |||||||||| |||||  ||| |||| |||||||| |||||||||| |||   ||||||| |||||||| |    
T  30110634 aaagtttcatagcatttcgaagtcatttaaatttattttgatttttcaaccaaaacgtgcaaaa-ttgaaattttattctgcgtaagcgcatactcacag 30110536  T
Q  294 gtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatgaagttttgcagtttttaaacgagagacaaattaattata 393  Q
    ||||||||| ||||| |||| || || |||||   | ||||| |||| ||  ||||||||||| ||||| ||||||||||||||| |||||||| |||||    
T  30110535 gtcaaatttagttccttaattttgtaggcatgacaataacatgataataacattcacaatgaaattttgtagtttttaaacgagatacaaattagttata 30110436  T
Q  394 aattgtttaagtaattcataattatg 419  Q
    || |||||||| |||| |||||||||    
T  30110435 aagtgtttaagaaatttataattatg 30110410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 255 - 419
Target Start/End: Original strand, 30216301 - 30216462
Alignment:
Q  255 aaaattgaaattttgttcctagtaagcgtatactcactggtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatg 354  Q
    |||||||||||||||||||  ||||||||||||||||  ||||||||| |||||||||| || || |||||  |||||||| ||||||| |||  || ||    
T  30216301 aaaattgaaattttgttccgcgtaagcgtatactcacaagtcaaatttagttccctaattttgtaggcatgactagaacatgataagaacctt--cagtg 30216398  T
Q  355 aagttttgcagtttttaaacgagagacaaattaattataaattgtttaagtaattcataattatg 419  Q
    || ||||| ||| |||||| |||| |||| ||||||||||||||||| || ||||||||||||||    
T  30216399 aaattttgtagtctttaaatgagatacaagttaattataaattgttt-agaaattcataattatg 30216462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 283 - 419
Target Start/End: Complemental strand, 40529600 - 40529464
Alignment:
Q  283 tatactcactggtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatgaagttttgcagtttttaaacgagagaca 382  Q
    |||||||||  ||||||||| ||||| |||| || || |||||  |||||||| |||| || |||||||||||| ||||| | ||||||||| ||| |||    
T  40529600 tatactcacaagtcaaatttagttccataattttgtaggcatgactagaacatgataaaaaccttcacaatgaaattttgtaatttttaaacaagataca 40529501  T
Q  383 aattaattataaattgtttaagtaattcataattatg 419  Q
    |||||||||||||||||||||| ||||||||||||||    
T  40529500 aattaattataaattgtttaagaaattcataattatg 40529464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 328 - 417
Target Start/End: Original strand, 13394870 - 13394959
Alignment:
Q  328 tagaacataataagaatcttcacaatgaagttttgcagtttttaaacgagagacaaattaattataaattgtttaagtaattcataatta 417  Q
    |||||||| ||||||| |||||||||||| ||||| ||| ||||||||||| ||||||||||||||||||||||||| ||||||||||||    
T  13394870 tagaacatgataagaaccttcacaatgaaattttgtagtctttaaacgagatacaaattaattataaattgtttaagaaattcataatta 13394959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 255 - 419
Target Start/End: Original strand, 50204643 - 50204797
Alignment:
Q  255 aaaattgaaatttt-gttcctagtaagcgtatactcactggtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaat 353  Q
    |||||||||||||| |||||  ||||||||||||||||  ||||||||| |||||||||| || || |||||           ||||||| |||||||||    
T  50204643 aaaattgaaatttttgttccgcgtaagcgtatactcacaagtcaaatttagttccctaattttgtaggcatg-----------ataagaaccttcacaat 50204731  T
Q  354 gaagttttgcagtttttaaacgagagacaaattaattataaattgtttaagtaattcataattatg 419  Q
    ||| ||||| ||| ||||||||||| | ||||||||||||||||||||||| ||||||||||||||    
T  50204732 gaaattttgtagtctttaaacgagatataaattaattataaattgtttaagaaattcataattatg 50204797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 256 - 420
Target Start/End: Complemental strand, 9415509 - 9415345
Alignment:
Q  256 aaattgaaattttgttcctagtaagcgtatactcactggtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatga 355  Q
    |||||| ||||||||| | |||||||||||||| ||  |||||||| ||||| ||||| || ||  |||||| |||| || |||| || |||| | || |    
T  9415509 aaattgcaattttgtttcgagtaagcgtatacttacgagtcaaattccgttctctaattttttagacatggtcagaatatcataaaaaccttcgccataa 9415410  T
Q  356 agttttgcagtttttaaacgagagacaaattaattataaattgtttaagtaattcataattatgg 420  Q
    | |||||  |||||||||||||| ||||||| ||||| ||||||||||| |||||||||||||||    
T  9415409 aattttggggtttttaaacgagatacaaatttattatgaattgtttaagaaattcataattatgg 9415345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 257 - 420
Target Start/End: Original strand, 4038262 - 4038425
Alignment:
Q  257 aattgaaattttgttcctagtaagcgtatactcactggtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatgaa 356  Q
    ||||| ||||||||||| ||||| | ||||||||| |||| |||||||||| ||||| || || | ||||||  ||| | |||||||  ||||| |||||    
T  4038262 aattgcaattttgttccgagtaaacctatactcacaggtctaatttcgttctctaattttgtaggtatggttttaacttcataagaactttcaccatgaa 4038361  T
Q  357 gttttgcagtttttaaacgagagacaaattaattataaattgtttaagtaattcataattatgg 420  Q
     ||||| || |||||||||||| | |||||| |||| ||||| ||||| |||||||||||||||    
T  4038362 attttggaggttttaaacgagatataaattagttatgaattgcttaagaaattcataattatgg 4038425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 193 - 404
Target Start/End: Original strand, 13502113 - 13502322
Alignment:
Q  193 caaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatactcact 292  Q
    |||||||| |||||||||||| || | || |||||| |||  |||| || ||||| | ||||||| ||| ||||||||||| ||||||| ||||| ||      
T  13502113 caaagtttcatagcatttcaaagatgttttaatttactttatttttcaatcaaaacg-tgcaaaa-ttgcaattttgttccaagtaagcatatacacatg 13502210  T
Q  293 ggtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatgaagttttgcagtttttaaacgagagacaaattaattat 392  Q
    | ||||||||| ||||||||| || || ||||| | ||||||| |||||||  | ||| ||||| ||||| |||||||||| |||||||  |||||||||    
T  13502211 gatcaaatttccttccctaattttgtaggcatgctcagaacatcataagaacttacaccatgaaattttggagtttttaaatgagagacggattaattat 13502310  T
Q  393 aaattgtttaag 404  Q
     |||||||||||    
T  13502311 gaattgtttaag 13502322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 256 - 418
Target Start/End: Original strand, 26546856 - 26547017
Alignment:
Q  256 aaattgaaattttgttcctagtaagcgtatactcactggtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatga 355  Q
    |||||| ||||||||||  ||||||||||||||||| ||||||||| ||||| ||||| || || |||| |||||||||| |||||||  || || ||||    
T  26546856 aaattgcaattttgttctgagtaagcgtatactcacgggtcaaattccgttctctaattttgtaggcattgttagaacatcataagaacatttaccatga 26546955  T
Q  356 agttttgcagtttttaaacgagagacaaattaattataaattgtttaagtaattcataattat 418  Q
    | ||||  |||||||||| ||   ||||||||||||| |||| |||||| | |||||||||||    
T  26546956 aattttagagtttttaaaagacgtacaaattaattatgaattttttaag-atttcataattat 26547017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 331 - 420
Target Start/End: Complemental strand, 29094683 - 29094594
Alignment:
Q  331 aacataataagaatcttcacaatgaagttttgcagtttttaaacgagagacaaattaattataaattgtttaagtaattcataattatgg 420  Q
    ||||| ||||||| |||||| ||||| ||||| ||||||||||||||| || |||||||||| ||||||||||| |||||||||||||||    
T  29094683 aacatcataagaaccttcaccatgaaattttgaagtttttaaacgagatacgaattaattatgaattgtttaagaaattcataattatgg 29094594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 207 - 420
Target Start/End: Complemental strand, 31853885 - 31853673
Alignment:
Q  207 atttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatactcactggtcaaatttcgtt 306  Q
    ||||||| |||| ||| ||||||||| |||||  ||| ||||  ||| ||| ||| |||||||| |  |||||| |||||||||| ||||||||| ||||    
T  31853885 atttcaaagacgtttctatttattttaatttttcaaccaaaacatgcgaaa-ttgcaattttgtactgagtaagtgtatactcacgggtcaaattacgtt 31853787  T
Q  307 ccctaatcttataagcatggttagaacataataagaatcttcacaatgaagttttgcagtttttaaacgagagacaaattaattataaattgtttaagta 406  Q
       |||| || || ||||||||||||| | ||||||| |||||| || ||  |||| ||| ||||| ||| | ||||||||||||| ||||||||||| |    
T  31853786 ttttaattttgtaggcatggttagaacgtcataagaaccttcaccataaaaatttggagtgtttaaccgaaatacaaattaattatgaattgtttaagaa 31853687  T
Q  407 attcataattatgg 420  Q
    ||||||| ||||||    
T  31853686 attcatacttatgg 31853673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 220 - 420
Target Start/End: Complemental strand, 56225950 - 56225750
Alignment:
Q  220 ttcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaatttt-gttcctagtaagcgtatactcactggtcaaatttcgttccctaatcttat 318  Q
    |||||||||||||||||||  ||| |||| |||||||| ||| |||||| ||| |  |||| | ||||||||  |||||||||||||||| |||| || |    
T  56225950 ttcaatttatttttatttttcaaccaaaacgtgcaaaa-ttgcaattttcgtttcgggtaaacatatactcatgggtcaaatttcgttccataattttgt 56225852  T
Q  319 aagcatggttagaacataataagaatcttcacaatgaagttttgcagtttttaaacgagagacaaattaattataaattgtttaagtaattcataattat 418  Q
    | ||||||||||||||| | ||||| |||||| |     ||||  |||||||||| ||||||||| ||||||||  |||||| ||| |||||||||||||    
T  56225851 aggcatggttagaacatcacaagaaccttcaccaaatttttttatagtttttaaatgagagacaatttaattatggattgttaaagaaattcataattat 56225752  T
Q  419 gg 420  Q
    ||    
T  56225751 gg 56225750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 328 - 419
Target Start/End: Complemental strand, 1818256 - 1818164
Alignment:
Q  328 tagaacataataagaatcttcacaatgaagttttgcagtttttaaacgagagacaaattaattataaatt-gtttaagtaattcataattatg 419  Q
    |||||||| || |||| |||||||||||| ||||| |||||| |||||||| ||||||||||||||| || ||||||| ||||||||||||||    
T  1818256 tagaacatgattagaaccttcacaatgaaattttgtagttttcaaacgagatacaaattaattataagttagtttaagaaattcataattatg 1818164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 194 - 313
Target Start/End: Original strand, 13390943 - 13391061
Alignment:
Q  194 aaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatactcactg 293  Q
    ||||||| |||||||||| | | || || ||||| |||| |||||  ||| |||| |||||||| |||||||||||||||  ||||||||||||| ||      
T  13390943 aaagtttcatagcatttcgaagtcgtttaaatttcttttgatttttcaaccaaaacgtgcaaaa-ttgaaattttgttccgcgtaagcgtatactaacaa 13391041  T
Q  294 gtcaaatttcgttccctaat 313  Q
    ||||||||| ||||||||||    
T  13391042 gtcaaatttagttccctaat 13391061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 122 - 185
Target Start/End: Complemental strand, 21360514 - 21360451
Alignment:
Q  122 ataaaggacgaaaacgttacctaaaaataagttatgggaccatttctgtaattttgcctaaaaa 185  Q
    ||||||||| |||||||||||||||| ||||||| ||||| |||| |||||||||||| |||||    
T  21360514 ataaaggactaaaacgttacctaaaattaagttaagggactatttatgtaattttgccaaaaaa 21360451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 118 - 185
Target Start/End: Original strand, 30055488 - 30055555
Alignment:
Q  118 aaaaataaaggacgaaaacgttacctaaaaataagttatgggaccatttctgtaattttgcctaaaaa 185  Q
    ||||| |||||||||||| ||||||||||| ||||||| ||||| | || ||||||||||||||||||    
T  30055488 aaaaaaaaaggacgaaaatgttacctaaaattaagttaagggactaattgtgtaattttgcctaaaaa 30055555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 199 - 373
Target Start/End: Original strand, 49062453 - 49062626
Alignment:
Q  199 tttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatactcactggtcaa 298  Q
    ||||||||||||| | ||||  |||||||||||| |||||  ||| |||| |||| ||||||| ||||| ||||| ||| | ||||||||||| ||||||    
T  49062453 tttatagcatttcgaagacgcctcaatttattttgatttttcaactaaaatgtgc-aaaattgcaatttcgttccaagtgatcgtatactcacaggtcaa 49062551  T
Q  299 atttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatgaagttttgcagtttttaaa 373  Q
     ||||| || ||| | ||  | ||| |||||||| || ||| ||| |||||| ||||| ||||  ||||||||||    
T  49062552 ttttcgctcactagttttgaaggcaaggttagaatattatatgaaccttcaccatgaaattttagagtttttaaa 49062626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 337 - 420
Target Start/End: Complemental strand, 5290970 - 5290887
Alignment:
Q  337 ataagaatcttcacaatgaagttttgcagtttttaaacgagagacaaattaattataaattgtttaagtaattcataattatgg 420  Q
    ||||||| |||||||||||| ||||| ||||||||||||| | ||||||| ||||| |||  |  ||| |||||||||||||||    
T  5290970 ataagaaccttcacaatgaaattttggagtttttaaacgataaacaaatttattatgaataatccaagaaattcataattatgg 5290887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 191 - 418
Target Start/End: Original strand, 20629019 - 20629245
Alignment:
Q  191 tgcaaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatactca 290  Q
    |||||||||| |||||||||| | || | ||| || ||||||||||||  ||| ||||  | ||||| ||| |||||| |||| ||||| | ||||||||    
T  20629019 tgcaaagtttcatagcatttcgaagatgtttctatctatttttatttttcaaccaaaacatacaaaa-ttgcaattttattccgagtaaacatatactca 20629117  T
Q  291 ctggtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatgaagttttgcagtttttaaacgagagacaaattaatt 390  Q
    | | | ||||||  ||| ||| |  |||  |||||||||||||||  |||||| ||| |  |  ||  |||| ||||||||||||||| || ||||||||    
T  20629118 cggatgaaatttaattctctatttctattggcatggttagaacatcgtaagaacctttatcaaaaaaatttggagtttttaaacgagatacgaattaatt 20629217  T
Q  391 ataaattgtttaagtaattcataattat 418  Q
    |  | ||||||||| |||||||||||||    
T  20629218 aagagttgtttaagaaattcataattat 20629245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 380 - 419
Target Start/End: Complemental strand, 26448538 - 26448499
Alignment:
Q  380 acaaattaattataaattgtttaagtaattcataattatg 419  Q
    ||||||||||||||||||||||||| ||||||||||||||    
T  26448538 acaaattaattataaattgtttaagaaattcataattatg 26448499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 337 - 416
Target Start/End: Complemental strand, 54933538 - 54933459
Alignment:
Q  337 ataagaatcttcacaatgaagttttgcagtttttaaacgagagacaaattaattataaattgtttaagtaattcataatt 416  Q
    |||||||  ||||| ||||| ||||| |||||||||| || | || ||||||||||||||||||| || |||||||||||    
T  54933538 ataagaaatttcaccatgaaattttggagtttttaaatgataaacgaattaattataaattgttttagaaattcataatt 54933459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 194 - 308
Target Start/End: Complemental strand, 44157295 - 44157182
Alignment:
Q  194 aaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatactcactg 293  Q
    ||||||| |||||||||| | | || || |||||||||| |||||  ||| ||||  ||||||| |||||||||| ||||  ||||||||||||||||      
T  44157295 aaagtttcatagcatttcgaagtcgtttaaatttattttgatttttcaaccaaaacatgcaaaa-ttgaaattttattccgcgtaagcgtatactcacaa 44157197  T
Q  294 gtcaaatttcgttcc 308  Q
    ||||||||| |||||    
T  44157196 gtcaaatttagttcc 44157182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 255 - 416
Target Start/End: Complemental strand, 9070891 - 9070730
Alignment:
Q  255 aaaattgaaattttgttcctagtaagcgtatactcactggtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatg 354  Q
    ||||||| |||||||||   ||||||| |||||| || ||||||| |  |||||||| | || || || || ||||||||| |||| ||||||||| ||     
T  9070891 aaaattgcaattttgttatgagtaagcatatactgacgggtcaaactctgttccctagttttgtaggcttgcttagaacatcataataatcttcaccata 9070792  T
Q  355 aagttttgcagtttttaaacgagagacaaattaattataaattgtttaagtaattcataatt 416  Q
    || ||||| |||||| ||| ||  ||  ||| |||||| |||||| |||| |||||||||||    
T  9070791 aaattttggagttttgaaatgatggatgaatcaattatgaattgtataagaaattcataatt 9070730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 122 - 178
Target Start/End: Original strand, 30799612 - 30799668
Alignment:
Q  122 ataaaggacgaaaacgttacctaaaaataagttatgggaccatttctgtaattttgc 178  Q
    |||||||||||||| ||||||||||| ||||||| ||||| | || |||||||||||    
T  30799612 ataaaggacgaaaatgttacctaaaattaagttaagggactaattgtgtaattttgc 30799668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 297 - 420
Target Start/End: Original strand, 2941119 - 2941242
Alignment:
Q  297 aaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatgaagttttgcagtttttaaacgagagacaaattaattataaat 396  Q
    |||||| |||||||||| || || |||| |||| ||||| |   |||| ||||  ||||| ||||  |||||||||||||| ||  ||| ||||||||||    
T  2941119 aaattttgttccctaattttttaggcatagttaaaacatcaatcgaatattcaacatgaaattttagagtttttaaacgagggatgaataaattataaat 2941218  T
Q  397 tgtttaagtaattcataattatgg 420  Q
    | |||||| ||||| |||||||||    
T  2941219 tatttaagaaattcttaattatgg 2941242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 188 - 291
Target Start/End: Complemental strand, 26449393 - 26449291
Alignment:
Q  188 atttgcaaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatac 287  Q
    ||||| ||||||| |||||||||| | | || || ||||||||||  ||||  ||  |||| |||||||| |||||||||||||||  ||||||||||||    
T  26449393 atttgtaaagtttcatagcatttcgaagtcgtttaaatttattttgttttttcaatcaaaacgtgcaaaa-ttgaaattttgttccgcgtaagcgtatac 26449295  T
Q  288 tcac 291  Q
    ||||    
T  26449294 tcac 26449291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 122 - 185
Target Start/End: Complemental strand, 37872824 - 37872761
Alignment:
Q  122 ataaaggacgaaaacgttacctaaaaataagttatgggaccatttctgtaattttgcctaaaaa 185  Q
    |||||||||||||| |||||||||||  |||||| ||||| | || |||||||||||| |||||    
T  37872824 ataaaggacgaaaatgttacctaaaataaagttaagggactaattgtgtaattttgccaaaaaa 37872761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 255 - 302
Target Start/End: Complemental strand, 40529698 - 40529651
Alignment:
Q  255 aaaattgaaattttgttcctagtaagcgtatactcactggtcaaattt 302  Q
    |||||||||||||||||||  ||||||||||||||||  |||||||||    
T  40529698 aaaattgaaattttgttccgcgtaagcgtatactcacaagtcaaattt 40529651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 118 - 185
Target Start/End: Original strand, 46143555 - 46143622
Alignment:
Q  118 aaaaataaaggacgaaaacgttacctaaaaataagttatgggaccatttctgtaattttgcctaaaaa 185  Q
    |||||||||||||||||  |||||||||||  |||||| || || | || ||||||||||||||||||    
T  46143555 aaaaataaaggacgaaagtgttacctaaaataaagttaaggcactaattgtgtaattttgcctaaaaa 46143622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 122 - 184
Target Start/End: Original strand, 13294891 - 13294953
Alignment:
Q  122 ataaaggacgaaaacgttacctaaaaataagttatgggaccatttctgtaattttgcctaaaa 184  Q
    |||||||||||||  |||||||||||  |||||| ||||| | || |||||||||||||||||    
T  13294891 ataaaggacgaaagtgttacctaaaataaagttaagggactaattgtgtaattttgcctaaaa 13294953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 122 - 180
Target Start/End: Complemental strand, 25297737 - 25297679
Alignment:
Q  122 ataaaggacgaaaacgttacctaaaaataagttatgggaccatttctgtaattttgcct 180  Q
    |||||||||||||  ||||||||||| ||||||| ||||| | || |||||||||||||    
T  25297737 ataaaggacgaaagtgttacctaaaattaagttaagggactaattgtgtaattttgcct 25297679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 367 - 416
Target Start/End: Original strand, 18625554 - 18625603
Alignment:
Q  367 ttttaaacgagagacaaattaattataaattgtttaagtaattcataatt 416  Q
    ||||||||||| |||||||||||||| |||| || ||| |||||||||||    
T  18625554 ttttaaacgagtgacaaattaattatgaatttttaaagaaattcataatt 18625603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 119 - 179
Target Start/End: Complemental strand, 30055268 - 30055208
Alignment:
Q  119 aaaataaaggacgaaaacgttacctaaaaataagttatgggaccatttctgtaattttgcc 179  Q
    |||||||||||| |||  ||||||||||| ||||||| ||||| | || ||||||||||||    
T  30055268 aaaataaaggacaaaagtgttacctaaaattaagttaagggactaattgtgtaattttgcc 30055208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 118 - 182
Target Start/End: Complemental strand, 42856865 - 42856801
Alignment:
Q  118 aaaaataaaggacgaaaacgttacctaaaaataagttatgggaccatttctgtaattttgcctaa 182  Q
    |||||||||||||||||  |||||||||||  || ||| ||||| | || |||||||||||||||    
T  42856865 aaaaataaaggacgaaagtgttacctaaaataaaattaagggactaattgtgtaattttgcctaa 42856801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 98; Significance: 5e-48; HSPs: 39)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 194 - 419
Target Start/End: Original strand, 40081235 - 40081459
Alignment:
Q  194 aaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatactcactg 293  Q
    ||||||| |||||||||| | | || || |||||||||| |||||  |||  ||| |||||||| |||||||||||||||  ||||||||||||||||      
T  40081235 aaagtttcatagcatttcgaagtcgtttaaatttattttgatttttcaactgaaacgtgcaaaa-ttgaaattttgttccgcgtaagcgtatactcacaa 40081333  T
Q  294 gtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatgaagttttgcagtttttaaacgagagacaaattaattata 393  Q
    ||||||||| |||||||||| || || |||||  |||||||| ||||||| |||||||||||| ||||  | ||||||||||||| ||||||||||||||    
T  40081334 gtcaaatttagttccctaattttgtaggcatgactagaacatgataagaaccttcacaatgaaattttataatttttaaacgagatacaaattaattata 40081433  T
Q  394 aattgtttaagtaattcataattatg 419  Q
    ||||||||||| ||||||||||||||    
T  40081434 aattgtttaagaaattcataattatg 40081459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 194 - 419
Target Start/End: Original strand, 6930389 - 6930613
Alignment:
Q  194 aaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatactcactg 293  Q
    ||||||| |||||||||| | | || || |||||||| | |||||  ||| |||| |||||||| |||||||||||||||  ||||||||||||||||      
T  6930389 aaagtttcatagcatttcgaagtcgtttaaatttattatgatttttcaaccaaaacgtgcaaaa-ttgaaattttgttccgcgtaagcgtatactcacaa 6930487  T
Q  294 gtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatgaagttttgcagtttttaaacgagagacaaattaattata 393  Q
    ||||||||| |||||||||| || || |||||  |||||||| ||||||| |||||||| ||| ||||| ||| ||||||||||| ||||||||||||||    
T  6930488 gtcaaatttagttccctaattttgtaggcatgactagaacatgataagaaccttcacaaggaaattttgtagtctttaaacgagatacaaattaattata 6930587  T
Q  394 aattgtttaagtaattcataattatg 419  Q
    ||||||||||| | ||||||||||||    
T  6930588 aattgtttaagaagttcataattatg 6930613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 93; E-Value: 5e-45
Query Start/End: Original strand, 188 - 419
Target Start/End: Original strand, 6268913 - 6269144
Alignment:
Q  188 atttgcaaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatac 287  Q
    ||||| ||||||| |||||||||| | | || || |||||||||| |||||  |||  ||| |||||||| |||||||||||||||  ||||||||||||    
T  6268913 atttgtaaagtttcatagcatttcgaagtcgtttaaatttattttgatttttcaactgaaacgtgcaaaa-ttgaaattttgttccgcgtaagcgtatac 6269011  T
Q  288 tcactggtcaaatttcgttccctaatcttataagcatggttagaacataataagaatc-ttcacaatgaagttttgcagtttttaaacgagagacaaatt 386  Q
    ||||  ||||||||| |||||||||| || || |||||  |||||||| ||||||| | ||||||||||| ||||| |  |||||||||||| |||||||    
T  6269012 tcacaagtcaaatttagttccctaattttgtaggcatgactagaacatgataagaaacattcacaatgaaattttgtaaattttaaacgagatacaaatt 6269111  T
Q  387 aattataaattgtttaagtaattcataattatg 419  Q
    |||||||||||||||||| ||||||||||||||    
T  6269112 aattataaattgtttaagaaattcataattatg 6269144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 93; E-Value: 5e-45
Query Start/End: Original strand, 188 - 419
Target Start/End: Original strand, 22967931 - 22968162
Alignment:
Q  188 atttgcaaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatac 287  Q
    ||||| ||||||| |||||||||| | | || || |||||||||| |||||  |||  ||| |||||||| |||||||||||||||  ||||||||||||    
T  22967931 atttgtaaagtttcatagcatttcgaagtcgtttaaatttattttgatttttcaactgaaacgtgcaaaa-ttgaaattttgttccgcgtaagcgtatac 22968029  T
Q  288 tcactggtcaaatttcgttccctaatcttataagcatggttagaacataataagaatc-ttcacaatgaagttttgcagtttttaaacgagagacaaatt 386  Q
    ||||  ||||||||| |||||||||| || || |||||  |||||||| ||||||| | ||||||||||| ||||| |  |||||||||||| |||||||    
T  22968030 tcacaagtcaaatttagttccctaattttgtaggcatgactagaacatgataagaaacattcacaatgaaattttgtaaattttaaacgagatacaaatt 22968129  T
Q  387 aattataaattgtttaagtaattcataattatg 419  Q
    |||||||||||||||||| ||||||||||||||    
T  22968130 aattataaattgtttaagaaattcataattatg 22968162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 93; E-Value: 5e-45
Query Start/End: Original strand, 223 - 419
Target Start/End: Complemental strand, 27935818 - 27935624
Alignment:
Q  223 aatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatactcactggtcaaatttcgttccctaatcttataagc 322  Q
    |||||||||| |||||  ||| |||| |||||||| |||||||||||||||  ||||| ||||||||||  ||||||||| |||||||||| || || ||    
T  27935818 aatttattttgatttttcaaccaaaacgtgcaaaa-ttgaaattttgttccgcgtaagtgtatactcacaagtcaaatttagttccctaattttgtaggc 27935720  T
Q  323 atggttagaacataataagaatcttcacaatgaagttttgcagtttttaaacgagagacaaattaattataaattgtttaagtaattcataattatg 419  Q
    |||  |||||||| |||||||||||||||||||| ||||| |||||||||||| || |||||||||||| |||||||||||| ||||||||||||||    
T  27935719 atgactagaacattataagaatcttcacaatgaaattttgtagtttttaaacg-gatacaaattaattacaaattgtttaagaaattcataattatg 27935624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 194 - 419
Target Start/End: Complemental strand, 5135959 - 5135735
Alignment:
Q  194 aaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatactcactg 293  Q
    ||||||| |||||||||| | | |  || |||||||||| |||||  ||| |||| |||||||| |||||||||||||||  ||||||||||||||||      
T  5135959 aaagtttcatagcatttcgaagtcatttaaatttattttgatttttcaaccaaaacgtgcaaaa-ttgaaattttgttccgcgtaagcgtatactcacaa 5135861  T
Q  294 gtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatgaagttttgcagtttttaaacgagagacaaattaattata 393  Q
    ||||||||| |||||||| | |  || |||||  || ||||| ||||||| |||||||||||| ||||| |||||||||| |||| ||||||||||||||    
T  5135860 gtcaaatttagttccctattttcgtaggcatgactataacatgataagaaccttcacaatgaaattttgtagtttttaaatgagatacaaattaattata 5135761  T
Q  394 aattgtttaagtaattcataattatg 419  Q
    ||||||||||| ||||||||||||||    
T  5135760 aattgtttaagaaattcataattatg 5135735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 194 - 419
Target Start/End: Complemental strand, 45183651 - 45183428
Alignment:
Q  194 aaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatactcactg 293  Q
    ||||||| |||||||||| | | || || |||||||| | |||||  ||| |||| |||||||| |||||||||||||||  ||||||||||||||||      
T  45183651 aaagtttcatagcatttcgaagtcgtttaaatttattatgatttttcaaccaaaacgtgcaaaa-ttgaaattttgttccgcgtaagcgtatactcacaa 45183553  T
Q  294 gtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatgaagttttgcagtttttaaacgagagacaaattaattata 393  Q
    ||||||||| |||||||||| || || |||||  || ||||| ||||||| ||||||| |||| ||||| ||| ||||||||||| ||||||||||||||    
T  45183552 gtcaaatttagttccctaat-ttgtaggcatgactaaaacatgataagaaccttcacagtgaaattttgtagtctttaaacgagatacaaattaattata 45183454  T
Q  394 aattgtttaagtaattcataattatg 419  Q
    |||| |||||| ||||||||||||||    
T  45183453 aattttttaagaaattcataattatg 45183428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 188 - 419
Target Start/End: Complemental strand, 39772470 - 39772239
Alignment:
Q  188 atttgcaaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatac 287  Q
    ||||| ||||||| |||||||||| |   || || |||||||||| |||||  |||  ||| |||||||| |||||||||||||||  ||||||||||||    
T  39772470 atttgtaaagtttcatagcatttcgaaatcgtttaaatttattttgatttttcaactgaaacgtgcaaaa-ttgaaattttgttccgcgtaagcgtatac 39772372  T
Q  288 tcactggtcaaatttcgttccctaatcttataagcatggttagaacataataagaatc-ttcacaatgaagttttgcagtttttaaacgagagacaaatt 386  Q
    ||||  ||||||||| |||||||||| || || |||||  |||||||| ||||| | | ||||||||||| ||||| |  |||||||||||| |||||||    
T  39772371 tcacaagtcaaatttagttccctaattttgtaggcatgactagaacatgataaggaacattcacaatgaaattttgtaaattttaaacgagatacaaatt 39772272  T
Q  387 aattataaattgtttaagtaattcataattatg 419  Q
    |||||||||||||||||| ||||||||||||||    
T  39772271 aattataaattgtttaagaaattcataattatg 39772239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 194 - 419
Target Start/End: Original strand, 6503065 - 6503289
Alignment:
Q  194 aaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatactcactg 293  Q
    ||||||| ||| |||||| | | || || |||||||| | |||||  ||| |||| |||||||| |||||||||||||||  ||||||||||||||||      
T  6503065 aaagtttcatatcatttcgaagtcgtttaaatttattatgatttttcaaccaaaacgtgcaaaa-ttgaaattttgttccgcgtaagcgtatactcacaa 6503163  T
Q  294 gtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatgaagttttgcagtttttaaacgagagacaaattaattata 393  Q
    ||||||||| |||||||||| || || |||||  ||||  || ||||||| ||||||| |||| ||| | ||| ||||||||||| ||||||||||||||    
T  6503164 gtcaaatttagttccctaattttgtaggcatgactagagtatgataagaaccttcacagtgaaatttcgtagtctttaaacgagatacaaattaattata 6503263  T
Q  394 aattgtttaagtaattcataattatg 419  Q
    ||||||||||| ||||||||||||||    
T  6503264 aattgtttaagaaattcataattatg 6503289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 255 - 419
Target Start/End: Complemental strand, 19390760 - 19390595
Alignment:
Q  255 aaaattgaaattttgttcctagtaagcgtatactcactggtcaaatttcgttccctaatcttataagcatggttagaacataataagaatc-ttcacaat 353  Q
    |||||||||||||||||||  ||||||||||||||||  ||||||||| ||| |||||| || || |||||  |||||||| ||||||| | ||||||||    
T  19390760 aaaattgaaattttgttccgcgtaagcgtatactcaccagtcaaatttagtttcctaattttgtaggcatgactagaacatgataagaaaccttcacaat 19390661  T
Q  354 gaagttttgcagtttttaaacgagagacaaattaattataaattgtttaagtaattcataattatg 419  Q
    ||| ||||| |  |||||||||||| ||||||||||||||||||||||||| ||||||||||||||    
T  19390660 gaaattttgtaaattttaaacgagatacaaattaattataaattgtttaagaaattcataattatg 19390595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 255 - 419
Target Start/End: Original strand, 19565056 - 19565221
Alignment:
Q  255 aaaattgaaattttgttcctagtaagcgtatactcactggtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatg 354  Q
    |||||||||||||||||||  ||||| ||||||||||  ||||||||| |||| ||||| || || ||||| ||||||||| ||||||| ||||||||||    
T  19565056 aaaattgaaattttgttccgcgtaagtgtatactcacaagtcaaatttagttctctaattttgtaggcatgattagaacatgataagaaccttcacaatg 19565155  T
Q  355 aagttttgcagtttttaaacgagagacaaattaattataaatt-gtttaagtaattcataattatg 419  Q
    || ||||| |||||||||| |||| ||||||||||||||| || ||||||| ||||||||||||||    
T  19565156 aaattttgtagtttttaaatgagatacaaattaattataagttagtttaagaaattcataattatg 19565221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 224 - 415
Target Start/End: Original strand, 29564674 - 29564868
Alignment:
Q  224 atttatttttattttaaaac-aaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatactcactggtcaaatt---tc--gttccctaatctta 317  Q
    |||||||||||||||  ||| ||||| |||||||| || ||||||||||||||||||||||||||||||  ||||||||   ||  ||||| |||| ||     
T  29564674 atttatttttatttttcaaccaaaaacgtgcaaaattt-aaattttgttcctagtaagcgtatactcacatgtcaaattaaatcatgttccttaattttg 29564772  T
Q  318 taagcatggttagaacataataagaatcttcacaatgaagttttgcagtttttaaacgagagacaaattaattataaattgtttaagtaattcataat 415  Q
    || ||||||||||||||||||||||| |||||||||||| ||||  ||||||||||   |||||||||||||||||||||||||||| ||||||||||    
T  29564773 taggcatggttagaacataataagaaccttcacaatgaaattttatagtttttaaa--tgagacaaattaattataaattgtttaagaaattcataat 29564868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 194 - 419
Target Start/End: Original strand, 34083615 - 34083838
Alignment:
Q  194 aaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatactcactg 293  Q
    ||||||| |||||||||| | | || || |||||||||| |||||  |||  ||| |||||||| |||||||||||||||  |||||||| ||||||       
T  34083615 aaagtttcatagcatttcgaagtcgtttaaatttattttgatttttcaactgaaacgtgcaaaa-ttgaaattttgttccgcgtaagcgtgtactcagaa 34083713  T
Q  294 gtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatgaagttttgcagtttttaaacgagagacaaattaattata 393  Q
    | ||||||| |||||||||| || || |||||  |||||||| ||||||| |||||||||||| ||||| | ||||||||||||| | ||||||||||||    
T  34083714 g-caaatttagttccctaattttgtaggcatgactagaacatgataagaaccttcacaatgaaattttgtaatttttaaacgagatataaattaattata 34083812  T
Q  394 aattgtttaagtaattcataattatg 419  Q
    ||||||||||| ||||||||||||||    
T  34083813 aattgtttaagaaattcataattatg 34083838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 255 - 419
Target Start/End: Complemental strand, 45336485 - 45336320
Alignment:
Q  255 aaaattgaaattttgttcctagtaagcgtatactcactggtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatg 354  Q
    |||||||||||||||||||  ||||| ||||||||||  ||||||||| |||||| ||| || || ||||| ||||||||| ||||||| ||| ||||||    
T  45336485 aaaattgaaattttgttccgcgtaagtgtatactcacaagtcaaatttagttcccaaattttgtaggcatgattagaacatgataagaacctttacaatg 45336386  T
Q  355 aagttttgcagtttttaaacgagagacaaattaattataaatt-gtttaagtaattcataattatg 419  Q
    || ||||| |||||||||| |||| ||||||||||||||| || ||||||| ||||||||||||||    
T  45336385 aaattttgtagtttttaaatgagatacaaattaattataagttagtttaagaaattcataattatg 45336320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 255 - 419
Target Start/End: Complemental strand, 33041561 - 33041400
Alignment:
Q  255 aaaattgaaattttgttcctagtaagcgtatactcactggtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatg 354  Q
    |||||||||||||||||||  |||||||||||| ||  |||||||||| |||||||||| || || |||||  |||||||| ||||||| ||||||| ||    
T  33041561 aaaattgaaattttgttccgcgtaagcgtatacaca--ggtcaaatttagttccctaattttgtaggcatgactagaacatgataagaaccttcacagtg 33041464  T
Q  355 aagttttgcagtttttaaacgagagacaaattaattataaattgtttaagtaattcataattatg 419  Q
    || ||||| ||| |||||| |||| |||||||||||||||||||||| || ||||||||||||||    
T  33041463 aaattttgtagtctttaaatgagatacaaattaattataaattgttt-agaaattcataattatg 33041400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 191 - 302
Target Start/End: Complemental strand, 8257517 - 8257407
Alignment:
Q  191 tgcaaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatactca 290  Q
    |||||||||| |||||||||||| |||| |||||||||||||||||||  ||| |||| |||||||| ||||||||||||||||||||||||||||||||    
T  8257517 tgcaaagtttcatagcatttcaaagacgtttcaatttatttttatttttcaaccaaaacgtgcaaaa-ttgaaattttgttcctagtaagcgtatactca 8257419  T
Q  291 ctggtcaaattt 302  Q
    | | ||||||||    
T  8257418 cagatcaaattt 8257407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 194 - 389
Target Start/End: Original strand, 11017765 - 11017959
Alignment:
Q  194 aaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatactcactg 293  Q
    ||||||| |||||||||| | | || || |||||||| | |||||  ||| |||| |||||||| |||||||||||||||  ||||||||||||| ||      
T  11017765 aaagtttcatagcatttcgaagtcgtttaaatttattatgattttttaaccaaaacgtgcaaaa-ttgaaattttgttccgcgtaagcgtatacttacaa 11017863  T
Q  294 gtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatgaagttttgcagtttttaaacgagagacaaattaat 389  Q
    ||||||||| |||||||||| || || |||||  |||| ||| ||||||| ||||||| |||| ||||| ||| ||||||||||| ||||||||||    
T  11017864 gtcaaatttagttccctaattttgtaggcatgactagagcatgataagaaccttcacagtgaaattttgtagtctttaaacgagatacaaattaat 11017959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 255 - 414
Target Start/End: Complemental strand, 27912615 - 27912456
Alignment:
Q  255 aaaattgaaattttgttcctagtaagcgtatactcactggtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatg 354  Q
    ||||||| ||||||| ||  ||||||| ||||||||  |||||||||| |||||||||  ||  | |||||||| |||||| |||||||  | ||| |||    
T  27912615 aaaattgtaattttgatctgagtaagcatatactcataggtcaaattttgttccctaaatttgcaggcatggttggaacatgataagaacatgcaccatg 27912516  T
Q  355 aagttttgcagtttttaaacgagagacaaattaattataaattgtttaagtaattcataa 414  Q
    || ||||| |||||||||||||| |||||||||||||| ||||||||| | |||||||||    
T  27912515 aaattttggagtttttaaacgagggacaaattaattatgaattgtttatgaaattcataa 27912456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 282 - 420
Target Start/End: Complemental strand, 35937806 - 35937668
Alignment:
Q  282 gtatactcactggtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatgaagttttgcagtttttaaacgagagac 381  Q
    |||||||||| ||||||||| | | |  |||| || || |||| |||||||||| ||||||| |||||| ||||||||||| |||||||||| |||| ||    
T  35937806 gtatactcacgggtcaaattccatcctgtaattttgtaggcatagttagaacatcataagaaccttcaccatgaagttttggagtttttaaaagagatac 35937707  T
Q  382 aaattaattataaattgtttaagtaattcataattatgg 420  Q
    ||||||||||| ||||||||||| || ||||||| ||||    
T  35937706 aaattaattatgaattgtttaagaaactcataataatgg 35937668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 346 - 425
Target Start/End: Complemental strand, 38282936 - 38282857
Alignment:
Q  346 ttcacaatgaagttttgcagtttttaaacgagagacaaattaattataaattgtttaagtaattcataattatggaaaat 425  Q
    ||||||||||| | ||| ||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||| ||||    
T  38282936 ttcacaatgaaatcttgtagtttttaaacgagatacaaattaattataaattgtttaagaaattcataattatgggaaat 38282857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 337 - 419
Target Start/End: Complemental strand, 8257357 - 8257275
Alignment:
Q  337 ataagaatcttcacaatgaagttttgcagtttttaaacgagagacaaattaattataaattgtttaagtaattcataattatg 419  Q
    ||||||| |||||||||||| ||||  ||||||||||||| ||| ||||||||||||||||| ||||| ||||||||||||||    
T  8257357 ataagaaccttcacaatgaaattttaaagtttttaaacgaaagaaaaattaattataaattgcttaagaaattcataattatg 8257275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 364 - 425
Target Start/End: Original strand, 38415473 - 38415534
Alignment:
Q  364 agtttttaaacgagagacaaattaattataaattgtttaagtaattcataattatggaaaat 425  Q
    ||||||||||| |||||||||||||||||||||| |||||  ||||||| ||||||||||||    
T  38415473 agtttttaaactagagacaaattaattataaattatttaacaaattcatgattatggaaaat 38415534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 122 - 181
Target Start/End: Original strand, 52091714 - 52091773
Alignment:
Q  122 ataaaggacgaaaacgttacctaaaaataagttatgggaccatttctgtaattttgccta 181  Q
    |||||||||||||| |||||| ||||||||||| |||||| |||| ||||||||||||||    
T  52091714 ataaaggacgaaaaagttaccaaaaaataagttgtgggactatttgtgtaattttgccta 52091773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 275 - 417
Target Start/End: Complemental strand, 7468899 - 7468757
Alignment:
Q  275 agtaagcgtatactcactggtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatgaagttttgcagtttttaaac 374  Q
    ||||||| ||||||||| | ||||||||||| | ||||| ||||| |||| ||||||||||||||| || |||||| |      |||  ||||||||||     
T  7468899 agtaagcttatactcacggttcaaatttcgtcctctaattttataggcatagttagaacataataaaaaccttcacgaaatttctttagagtttttaaat 7468800  T
Q  375 gagagacaaattaattataaattgtttaagtaattcataatta 417  Q
    || | || |||||||||| ||||||| ||| ||||||||||||    
T  7468799 gaaaaacgaattaattatgaattgttaaagaaattcataatta 7468757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 122 - 180
Target Start/End: Complemental strand, 52090939 - 52090881
Alignment:
Q  122 ataaaggacgaaaacgttacctaaaaataagttatgggaccatttctgtaattttgcct 180  Q
    ||||||||| |||||||||||||||||||||||| ||||| |||| | |||||||||||    
T  52090939 ataaaggactaaaacgttacctaaaaataagttaagggactatttatataattttgcct 52090881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 180 - 277
Target Start/End: Original strand, 3159292 - 3159388
Alignment:
Q  180 taaaaacaatttgcaaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagt 277  Q
    ||||||| || | |||| ||| |||||||||  | |||| |||||||||||||||||||  ||| |||| |||| |||||||||||||||||||||||    
T  3159292 taaaaacgatctacaaattttcatagcattttgaagacgtttcaatttatttttatttttcaaccaaaatgtgc-aaaattgaaattttgttcctagt 3159388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 118 - 183
Target Start/End: Complemental strand, 3612656 - 3612591
Alignment:
Q  118 aaaaataaaggacgaaaacgttacctaaaaataagttatgggaccatttctgtaattttgcctaaa 183  Q
    |||||||||||||||||| ||||||||||| ||||||| ||||| | || ||||||||| ||||||    
T  3612656 aaaaataaaggacgaaaatgttacctaaaattaagttaagggactaattgtgtaattttacctaaa 3612591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 339 - 420
Target Start/End: Original strand, 19814766 - 19814847
Alignment:
Q  339 aagaatcttcacaatgaagttttgcagtttttaaacgagagacaaattaattataaattgtttaagtaattcataattatgg 420  Q
    ||||| |||||| ||||| ||||| ||||||||||||||| || ||| |||||| |||| |||||| ||| |||||||||||    
T  19814766 aagaaccttcaccatgaaattttgaagtttttaaacgagatacgaatcaattatgaattttttaagaaatacataattatgg 19814847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 284 - 412
Target Start/End: Original strand, 219189 - 219317
Alignment:
Q  284 atactcactggtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatgaagttttgcagtttttaaacgagagacaa 383  Q
    |||||||  |||||||||| |||| ||||| || || ||||||||| ||||| | ||||| ||||||  | || ||||| || |||||||||||| | ||    
T  219189 atactcatgggtcaaattttgttctctaattttgtaggcatggttataacatcacaagaaacttcacctttaaattttggagattttaaacgagacaaaa 219288  T
Q  384 attaattataaattgtttaagtaattcat 412  Q
    ||||||| | ||||||||||  |||||||    
T  219289 attaattctgaattgtttaataaattcat 219317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 122 - 185
Target Start/End: Complemental strand, 5048446 - 5048383
Alignment:
Q  122 ataaaggacgaaaacgttacctaaaaataagttatgggaccatttctgtaattttgcctaaaaa 185  Q
    ||||||||  ||||||||| |||||| ||||||| | ||| |||| ||||||||||||||||||    
T  5048446 ataaaggattaaaacgttatctaaaattaagttaagagactatttatgtaattttgcctaaaaa 5048383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 191 - 238
Target Start/End: Original strand, 16094646 - 16094693
Alignment:
Q  191 tgcaaagttttatagcatttcaatgacgattcaatttatttttatttt 238  Q
    ||||||||||| ||||||||||| || | |||||||||||||||||||    
T  16094646 tgcaaagttttgtagcatttcaaagaagtttcaatttatttttatttt 16094693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 121 - 184
Target Start/End: Original strand, 44506331 - 44506394
Alignment:
Q  121 aataaaggacgaaaacgttacctaaaaataagttatgggaccatttctgtaattttgcctaaaa 184  Q
    ||||||||||||||| ||||||||||| ||||||| ||||  | || |||||||||||| ||||    
T  44506331 aataaaggacgaaaatgttacctaaaattaagttaagggattaattgtgtaattttgcccaaaa 44506394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 263 - 401
Target Start/End: Original strand, 10842155 - 10842293
Alignment:
Q  263 aattttgttcctagtaagcgtatactcactggtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatgaagttttg 362  Q
    ||||||||||| ||||| | |||| ||||  ||||||||| ||||| |||   | || |||| |||| ||||| | |||||||||||| |||||  |||     
T  10842155 aattttgttccaagtaaacatatagtcacgtgtcaaattttgttccgtaactatttaggcattgttataacatgacaagaatcttcaccatgaaagttta 10842254  T
Q  363 cagtttttaaacgagagacaaattaattataaattgttt 401  Q
     | ||||||||||||  |  |||||||||||||||||||    
T  10842255 gaatttttaaacgaggaattaattaattataaattgttt 10842293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 118 - 180
Target Start/End: Complemental strand, 17574434 - 17574372
Alignment:
Q  118 aaaaataaaggacgaaaacgttacctaaaaataagttatgggaccatttctgtaattttgcct 180  Q
    |||||||||||||||||  ||||||||||| |||||||  |||| | || |||||||||||||    
T  17574434 aaaaataaaggacgaaagtgttacctaaaattaagttaatggacgaattgtgtaattttgcct 17574372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 118 - 184
Target Start/End: Original strand, 22975629 - 22975695
Alignment:
Q  118 aaaaataaaggacgaaaacgttacctaaaaataagttatgggaccatttctgtaattttgcctaaaa 184  Q
    |||||||||||||||||  |||||||||||  |||||| ||||| | || |||||||||| ||||||    
T  22975629 aaaaataaaggacgaaagtgttacctaaaataaagttaagggactaattgtgtaattttgtctaaaa 22975695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 383 - 425
Target Start/End: Complemental strand, 40368715 - 40368673
Alignment:
Q  383 aattaattataaattgtttaagtaattcataattatggaaaat 425  Q
    ||||| |||| ||||||||||| ||||||||||||||||||||    
T  40368715 aattatttatgaattgtttaagaaattcataattatggaaaat 40368673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 323 - 420
Target Start/End: Complemental strand, 5177420 - 5177323
Alignment:
Q  323 atggttagaacataataagaatcttcacaatgaagttttgcagtttttaaacgagagacaaattaattataaattgtttaagtaattcataattatgg 420  Q
    |||||||||  || |||||||| ||||  ||||| ||||  |||||||||| || |||  |||||| ||||||||||||||  |||||| ||||||||    
T  5177420 atggttagagaatcataagaattttcatcatgaaattttaaagtttttaaatgatagatgaattaagtataaattgtttaacaaattcaaaattatgg 5177323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 122 - 182
Target Start/End: Complemental strand, 8851861 - 8851801
Alignment:
Q  122 ataaaggacgaaaacgttacctaaaaataagttatgggaccatttctgtaattttgcctaa 182  Q
    |||||||||||||  |||||||||||  |||||| ||||| | || |||||||||||||||    
T  8851861 ataaaggacgaaagtgttacctaaaataaagttaagggactaattgtgtaattttgcctaa 8851801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 122 - 186
Target Start/End: Original strand, 28830041 - 28830105
Alignment:
Q  122 ataaaggacgaaaacgttacctaaaaataagttatgggaccatttctgtaattttgcctaaaaac 186  Q
    |||||||||||||  |||| ||||||  |||||| ||||| | || |||||||||||||||||||    
T  28830041 ataaaggacgaaagtgttagctaaaataaagttaagggactaattgtgtaattttgcctaaaaac 28830105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 98; Significance: 5e-48; HSPs: 35)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 194 - 419
Target Start/End: Complemental strand, 45419254 - 45419030
Alignment:
Q  194 aaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatactcactg 293  Q
    ||||||| |||||||||| | | || || |||||||| | |||||  ||| |||| |||||||| |||||||||||||||  ||||||||||||||||      
T  45419254 aaagtttcatagcatttcgaagtcgtttaaatttattatgatttttcaaccaaaacgtgcaaaa-ttgaaattttgttccgcgtaagcgtatactcacaa 45419156  T
Q  294 gtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatgaagttttgcagtttttaaacgagagacaaattaattata 393  Q
    ||||||||| |||||||||| || || |||||  |||||||| ||||||| ||||||| |||| ||||| ||| ||||||||||| ||||||||||||||    
T  45419155 gtcaaatttagttccctaattttgtaggcatgactagaacatgataagaaccttcacagtgaaattttgtagtctttaaacgagatacaaattaattata 45419056  T
Q  394 aattgtttaagtaattcataattatg 419  Q
    ||||||||||| ||||||||||||||    
T  45419055 aattgtttaagaaattcataattatg 45419030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 180 - 417
Target Start/End: Original strand, 7072016 - 7072252
Alignment:
Q  180 taaaaacaatttgcaaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaa 279  Q
    |||||| ||| || ||||||| |||||||||| |   ||||| |||||||||| |||||  ||| |||| |||||||| ||||||||||||||   ||||    
T  7072016 taaaaataatatgtaaagtttcatagcatttcgaaatcgattaaatttattttgatttttcaaccaaaacgtgcaaaa-ttgaaattttgttcagcgtaa 7072114  T
Q  280 gcgtatactcactggtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatgaagttttgcagtttttaaacgagag 379  Q
    |||||||| |||  ||||||||| |||||||||| || || |||||  |||||||| ||||||| |||| ||||||| ||||| |||| ||||||||||     
T  7072115 gcgtatacccacaagtcaaatttagttccctaattttgtaggcatgactagaacatgataagaaccttcccaatgaaattttgtagttattaaacgagat 7072214  T
Q  380 acaaattaattataaattgtttaagtaattcataatta 417  Q
    ||||||||||||||||||||||||| ||||||||||||    
T  7072215 acaaattaattataaattgtttaagaaattcataatta 7072252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 93; E-Value: 5e-45
Query Start/End: Original strand, 188 - 419
Target Start/End: Original strand, 17444528 - 17444759
Alignment:
Q  188 atttgcaaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatac 287  Q
    ||||| ||||||| |||||||||| | | || || |||||||||| |||||  |||  ||| |||||||| |||||||||||||||  ||||||||||||    
T  17444528 atttgtaaagtttcatagcatttcgaagtcgtttaaatttattttgatttttcaactgaaacgtgcaaaa-ttgaaattttgttccgcgtaagcgtatac 17444626  T
Q  288 tcactggtcaaatttcgttccctaatcttataagcatggttagaacataataagaatc-ttcacaatgaagttttgcagtttttaaacgagagacaaatt 386  Q
    ||||  ||||||||| |||||||||| || || |||||  |||||||| ||||||| | ||||||||||| ||||| |  |||||||||||| |||||||    
T  17444627 tcacaagtcaaatttagttccctaattttgtaggcatgactagaacatgataagaaaccttcacaatgaaattttgtaaattttaaacgagatacaaatt 17444726  T
Q  387 aattataaattgtttaagtaattcataattatg 419  Q
    |||||||||||||||||| ||||||||||||||    
T  17444727 aattataaattgtttaagaaattcataattatg 17444759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 93; E-Value: 5e-45
Query Start/End: Original strand, 255 - 419
Target Start/End: Original strand, 31581175 - 31581339
Alignment:
Q  255 aaaattgaaattttgttcctagtaagcgtatactcactggtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatg 354  Q
    ||||||||||||||||| |  ||||||||||||||||  ||||||||| |||||||||| || || |||||  |||||||| ||||||| ||||||||||    
T  31581175 aaaattgaaattttgtttcgcgtaagcgtatactcacaagtcaaatttagttccctaattttgtaggcatgactagaacatgataagaaccttcacaatg 31581274  T
Q  355 aagttttgcagtttttaaacgagagacaaattaattataaattgtttaagtaattcataattatg 419  Q
    || ||||| | ||||||||||||| ||||||||||||||||||||||||| ||||||||||||||    
T  31581275 aaattttgtaatttttaaacgagatacaaattaattataaattgtttaagaaattcataattatg 31581339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 93; E-Value: 5e-45
Query Start/End: Original strand, 188 - 419
Target Start/End: Original strand, 41251121 - 41251352
Alignment:
Q  188 atttgcaaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatac 287  Q
    ||||| ||||||| |||||||||| | | || || |||||||||| |||||  |||  ||| |||||||| |||||||||||||||  ||||||||||||    
T  41251121 atttgtaaagtttcatagcatttcgaagtcgtttaaatttattttgatttttcaactgaaacgtgcaaaa-ttgaaattttgttccgcgtaagcgtatac 41251219  T
Q  288 tcactggtcaaatttcgttccctaatcttataagcatggttagaacataataagaatc-ttcacaatgaagttttgcagtttttaaacgagagacaaatt 386  Q
    ||||  ||||||||| |||||||||| || || |||||  |||||||| ||||||| | ||||||||||| ||||| |  |||||||||||| |||||||    
T  41251220 tcacaagtcaaatttagttccctaattttgtaggcatgactagaacatgataagaaacattcacaatgaaattttgtaaattttaaacgagatacaaatt 41251319  T
Q  387 aattataaattgtttaagtaattcataattatg 419  Q
    |||||||||||||||||| ||||||||||||||    
T  41251320 aattataaattgtttaagaaattcataattatg 41251352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 194 - 419
Target Start/End: Complemental strand, 35963363 - 35963139
Alignment:
Q  194 aaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatactcactg 293  Q
    ||||||| ||||||| || | | || || |||||||||| |||||  |||  ||| |||||||| |||||||||||||||  ||||||||||||||||      
T  35963363 aaagtttcatagcatatcgaagtcgtttaaatttattttgatttttcaactgaaacgtgcaaaa-ttgaaattttgttccgcgtaagcgtatactcacaa 35963265  T
Q  294 gtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatgaagttttgcagtttttaaacgagagacaaattaattata 393  Q
    ||||||||| |||||||||| || || |||||  |||||||| | ||||| |||||||||||| ||||| | ||||||||||||| ||||||||||||||    
T  35963264 gtcaaatttagttccctaattttgtaggcatgactagaacatgacaagaaccttcacaatgaaattttgtaatttttaaacgagatacaaattaattata 35963165  T
Q  394 aattgtttaagtaattcataattatg 419  Q
    ||||||||||  ||||||||||||||    
T  35963164 aattgtttaataaattcataattatg 35963139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 188 - 419
Target Start/End: Original strand, 6403291 - 6403522
Alignment:
Q  188 atttgcaaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatac 287  Q
    ||||| ||||||| |||||||||| |   || || |||||||||| |||||  |||  ||| |||||||| |||||||||||||||  ||||||||||||    
T  6403291 atttgtaaagtttcatagcatttcgaaatcgtttaaatttattttgatttttcaactgaaacgtgcaaaa-ttgaaattttgttccgcgtaagcgtatac 6403389  T
Q  288 tcactggtcaaatttcgttccctaatcttataagcatggttagaacataataagaatc-ttcacaatgaagttttgcagtttttaaacgagagacaaatt 386  Q
    ||||  ||||||||| |||||||||| || || |||||  |||||||| ||||||| | ||||||||||| ||||| |  |||||||||||| |||||||    
T  6403390 tcacaagtcaaatttagttccctaattttgtaggcatgactagaacatgataagaaacattcacaatgaaattttgtaaattttaaacgagatacaaatt 6403489  T
Q  387 aattataaattgtttaagtaattcataattatg 419  Q
    |||||||||||||||||| ||||||||||||||    
T  6403490 aattataaattgtttaagaaattcataattatg 6403522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 255 - 419
Target Start/End: Original strand, 12756393 - 12756557
Alignment:
Q  255 aaaattgaaattttgttcctagtaagcgtatactcactggtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatg 354  Q
    |||||||||||||||||||   |||||||||||||||  ||||||||| |||||||||| || || |||||  |||||||| ||||||| ||||||| ||    
T  12756393 aaaattgaaattttgttccgcataagcgtatactcacaagtcaaatttagttccctaattttgtaggcatgactagaacatgataagaaccttcacagtg 12756492  T
Q  355 aagttttgcagtttttaaacgagagacaaattaattataaattgtttaagtaattcataattatg 419  Q
    || ||||| ||| ||||||||||| ||||||||||||||||||||||||| ||||||||||||||    
T  12756493 aaattttgtagtctttaaacgagatacaaattaattataaattgtttaagaaattcataattatg 12756557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 255 - 419
Target Start/End: Complemental strand, 18982202 - 18982038
Alignment:
Q  255 aaaattgaaattttgttcctagtaagcgtatactcactggtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatg 354  Q
    |||||||||||||||||||  ||||||||||||||||  ||||||||| |||||||||| || || |||||  |||||||| ||||||| |||||| |||    
T  18982202 aaaattgaaattttgttccgcgtaagcgtatactcacaagtcaaatttagttccctaattttgtaggcatgactagaacatgataagaaccttcacgatg 18982103  T
Q  355 aagttttgcagtttttaaacgagagacaaattaattataaattgtttaagtaattcataattatg 419  Q
    || ||||| | ||||||||||||| | ||||||||||||||||||||||| ||||||||||||||    
T  18982102 aaattttgtaatttttaaacgagataaaaattaattataaattgtttaagaaattcataattatg 18982038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 194 - 417
Target Start/End: Original strand, 4554689 - 4554910
Alignment:
Q  194 aaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatactcactg 293  Q
    ||||||| ||| |||||| ||| || || |||||||||||||||| || ||||||| ||||||| |||||||||||||||  | ||||||||||| ||      
T  4554689 aaagtttcataacatttcgatgtcgtttaaatttatttttattttcaaccaaaaag-tgcaaaa-ttgaaattttgttccacgcaagcgtatactaacaa 4554786  T
Q  294 gtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatgaagttttgcagtttttaaacgagagacaaattaattata 393  Q
    |||||||||  ||| ||||| || || |||||  |||||||| |||||||  ||||||||||| ||||| ||||||||||||||| ||||||||||||||    
T  4554787 gtcaaatttaattctctaattttgtaggcatgactagaacatgataagaacattcacaatgaaattttgtagtttttaaacgagatacaaattaattata 4554886  T
Q  394 aattgtttaagtaattcataatta 417  Q
    ||||||||||| ||||| ||||||    
T  4554887 aattgtttaagaaattcttaatta 4554910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 194 - 417
Target Start/End: Original strand, 32126683 - 32126905
Alignment:
Q  194 aaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatactcactg 293  Q
    ||||||| |||||||||| | | || || |||||||||| |||||  |||  ||| ||| ||||||||||||||||||||  ||||||||||||||||      
T  32126683 aaagtttcatagcatttcgaagtcgtttaaatttattttgatttttcaactgaaacgtg-aaaaattgaaattttgttccgcgtaagcgtatactcacaa 32126781  T
Q  294 gtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatgaagttttgcagtttttaaacgagagacaaattaattata 393  Q
    ||||||||| |||||||||| || || |||||  |||||||| |||| || ||||| | |||| ||||| | ||||||||||||| ||||||||||||||    
T  32126782 gtcaaatttagttccctaattttgtaggcatgactagaacatgataataaccttcaaagtgaaattttgtaatttttaaacgagatacaaattaattata 32126881  T
Q  394 aattgtttaagtaattcataatta 417  Q
    ||||||||||| ||||||||||||    
T  32126882 aattgtttaagaaattcataatta 32126905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 255 - 419
Target Start/End: Original strand, 2957700 - 2957864
Alignment:
Q  255 aaaattgaaattttgttcctagtaagcgtatactcactggtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatg 354  Q
    |||||||||||||||||||  ||||| ||||||||||  ||||||||| |||||||||| || || |||||  |||||||| ||||||| || |||||||    
T  2957700 aaaattgaaattttgttccgcgtaagggtatactcacaagtcaaatttagttccctaattttgtaggcatgactagaacatgataagaacctacacaatg 2957799  T
Q  355 aagttttgcagtttttaaacgagagacaaattaattataaattgtttaagtaattcataattatg 419  Q
    || ||||| | ||||||||||||| ||||||||||||||||||||||||| ||||||||| ||||    
T  2957800 aaattttgtaatttttaaacgagatacaaattaattataaattgtttaagaaattcataaatatg 2957864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 194 - 419
Target Start/End: Complemental strand, 2286460 - 2286237
Alignment:
Q  194 aaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatactcactg 293  Q
    ||||||| |||||||||  | | || || |||||||||| |||||  |||  ||| |||||||| |||||||||||||||  ||||||||||||||||      
T  2286460 aaagtttcatagcattttgaagtcgtttaaatttattttgatttttcaactgaaacgtgcaaaa-ttgaaattttgttccgtgtaagcgtatactcacaa 2286362  T
Q  294 gtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatgaagttttgcagtttttaaacgagagacaaattaattata 393  Q
    | ||||||| ||| |||||| || || |||||  |||||||| ||||||| |||||||||||| ||||| | ||||||||||||| |||| |||||||||    
T  2286361 g-caaatttagtttcctaattttgtaggcatgactagaacatgataagaaccttcacaatgaaattttgtaatttttaaacgagatacaacttaattata 2286263  T
Q  394 aattgtttaagtaattcataattatg 419  Q
    ||||||||||| ||||||||||||||    
T  2286262 aattgtttaagaaattcataattatg 2286237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 194 - 419
Target Start/End: Original strand, 26162198 - 26162422
Alignment:
Q  194 aaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatactcactg 293  Q
    ||||||| ||| |||||| | | || || |||||||||| |||||  ||| |||| |||||||| |||||||||||||||  ||||||||||| ||||      
T  26162198 aaagtttcatatcatttcgaagtcgtttaaatttattttgatttttcaaccaaaacgtgcaaaa-ttgaaattttgttccgcgtaagcgtatagtcacaa 26162296  T
Q  294 gtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatgaagttttgcagtttttaaacgagagacaaattaattata 393  Q
    ||||||||| |||||||||| || || | |||  |||||||| ||||| | ||||| |||||| ||||| ||||||||||||||| |||||||| |||||    
T  26162297 gtcaaatttagttccctaattttgtaggtatgactagaacatgataaggaccttcagaatgaaattttgtagtttttaaacgagatacaaattagttata 26162396  T
Q  394 aattgtttaagtaattcataattatg 419  Q
    ||||||||||  ||||||||||||||    
T  26162397 aattgtttaaaaaattcataattatg 26162422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 256 - 420
Target Start/End: Original strand, 37621618 - 37621782
Alignment:
Q  256 aaattgaaattttgttcctagtaagcgtatactcactggtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatga 355  Q
    |||||| ||||||||||| ||||||| |||||||||   ||||| |  |||| ||||| || || ||||||||||||||| ||||||| |||||||||||    
T  37621618 aaattgcaattttgttccgagtaagcatatactcacgaatcaaagtctgttctctaattttgtaggcatggttagaacatcataagaaccttcacaatga 37621717  T
Q  356 agttttgcagtttttaaacgagagacaaattaattataaattgtttaagtaattcataattatgg 420  Q
    | ||||| ||||||||||||||| || |||||||||| |||| |||||| |||||||||||||||    
T  37621718 aattttgaagtttttaaacgagatacgaattaattatgaattatttaagaaattcataattatgg 37621782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 191 - 413
Target Start/End: Complemental strand, 26591716 - 26591496
Alignment:
Q  191 tgcaaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatactca 290  Q
    ||||||||||  ||||||||||| ||   |||||||||||||||||||  ||| |||| |||| ||| ||| ||||||| ||| ||||| ||||||||||    
T  26591716 tgcaaagtttcgtagcatttcaaagatatttcaatttatttttatttttcaaccaaaacgtgcgaaa-ttgcaattttgatccgagtaaacgtatactca 26591618  T
Q  291 ctggtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatgaagttttgcagtttttaaacgagagacaaattaatt 390  Q
      ||||||||| | ||| ||||| || || ||||||||||| |||| |||||| |||||| | ||| ||||  ||||||||||||||| |||||||||||    
T  26591617 tgggtcaaattccattctctaattttttaggcatggttagaccata-taagaaccttcaccaagaaattttagagtttttaaacgagatacaaattaatt 26591519  T
Q  391 ataaattgtttaagtaattcata 413  Q
    || ||||||||||| ||||||||    
T  26591518 atgaattgtttaagaaattcata 26591496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 204 - 414
Target Start/End: Complemental strand, 18829518 - 18829309
Alignment:
Q  204 agcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatactcactggtcaaatttc 303  Q
    |||||||||| |||| ||| ||||||||| |||||  ||| |||| |||| ||| ||| ||||||||||| |||||| |||||||||| ||||||||| |    
T  18829518 agcatttcaaagacgtttcgatttattttaatttttcaacgaaaacgtgcgaaa-ttgcaattttgttccgagtaagtgtatactcacgggtcaaattcc 18829420  T
Q  304 gttccctaatcttataagcatggttagaacataataagaatcttcacaatgaagttttgcagtttttaaacgagagacaaattaattataaattgtttaa 403  Q
    |||| ||||| || || |||| |||||||||| |||||||  |||||  |||| ||| | ||||||||||| | | || |||||||||| ||||||||||    
T  18829419 gttctctaattttgtaggcatagttagaacatcataagaacattcaccgtgaaatttagaagtttttaaacaatatacgaattaattatgaattgtttaa 18829320  T
Q  404 gtaattcataa 414  Q
    | |||||||||    
T  18829319 gaaattcataa 18829309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 276 - 417
Target Start/End: Complemental strand, 26238531 - 26238390
Alignment:
Q  276 gtaagcgtatactcactggtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatgaagttttgcagtttttaaacg 375  Q
    ||||||||||||||||  | ||||||| |||||||||| || || |||||  |||||||| ||||||| |||||||||||| ||||| |||||||||| |    
T  26238531 gtaagcgtatactcacaaggcaaatttagttccctaattttgtaggcatgactagaacatgataagaaccttcacaatgaaattttgtagtttttaaatg 26238432  T
Q  376 agagacaaattaattataaattgtttaagtaattcataatta 417  Q
    ||| |||||||||||||||||||||||   ||||||||||||    
T  26238431 agatacaaattaattataaattgtttataaaattcataatta 26238390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 255 - 419
Target Start/End: Complemental strand, 42442597 - 42442433
Alignment:
Q  255 aaaattgaaattttgttcctagtaagcgtatactcactggtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatg 354  Q
    ||||||||||||||||||   ||||||||||||||||  ||||||||| ||||| |||| || || |||||  |||||||| |||||||  |||||||||    
T  42442597 aaaattgaaattttgttctgcgtaagcgtatactcacaagtcaaatttagttccataattttgtaggcatgactagaacatgataagaacattcacaatg 42442498  T
Q  355 aagttttgcagtttttaaacgagagacaaattaattataaattgtttaagtaattcataattatg 419  Q
    || ||||  | ||||||||||||| | ||||||| ||||||||||||||| ||||||||| ||||    
T  42442497 aaattttataatttttaaacgagatataaattaactataaattgtttaagaaattcataaatatg 42442433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 283 - 419
Target Start/End: Original strand, 44084185 - 44084321
Alignment:
Q  283 tatactcactggtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatgaagttttgcagtttttaaacgagagaca 382  Q
    |||||||||  ||||||||| |||||||||| || || |||||  ||||| || |||| || |||||||||||| ||||| ||||||||||||||| |||    
T  44084185 tatactcacaagtcaaatttagttccctaattttgtaggcatgactagaaaatgataataaccttcacaatgaaattttgtagtttttaaacgagataca 44084284  T
Q  383 aattaattataaattgtttaagtaattcataattatg 419  Q
    ||||||||||||||| |||||| ||||||||||||||    
T  44084285 aattaattataaattatttaagaaattcataattatg 44084321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 223 - 380
Target Start/End: Complemental strand, 45121851 - 45121695
Alignment:
Q  223 aatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatactcactggtcaaatttcgttccctaatcttataagc 322  Q
    |||||||||| |||||  ||| |||| ||| |||||||||||||||||||| |||||||||||||||||  ||||||||| |||||||||| || || |     
T  45121851 aatttattttgatttttcaaccaaaacgtg-aaaaattgaaattttgttccaagtaagcgtatactcacatgtcaaatttagttccctaattttgtacgt 45121753  T
Q  323 atggttagaacataataagaatcttcacaatgaagttttgcagtttttaaacgagaga 380  Q
    |||  || ||||| ||||||| |||||||||||| ||||| ||||||||||| |||||    
T  45121752 atgactaaaacatgataagaaacttcacaatgaaattttgtagtttttaaacaagaga 45121695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 303 - 419
Target Start/End: Complemental strand, 21556659 - 21556543
Alignment:
Q  303 cgttccctaatcttataagcatggttagaacataataagaatcttcacaatgaagttttgcagtttttaaacgagagacaaattaattataaattgttta 402  Q
    ||||| ||||| || || |||||||| |||||| ||||||| |||||| ||||| ||||| ||||||||||||||| ||||||||||||| |||||||||    
T  21556659 cgttctctaattttgtaggcatggttggaacatcataagaaccttcaccatgaaattttggagtttttaaacgagatacaaattaattatgaattgttta 21556560  T
Q  403 agtaattcataattatg 419  Q
    || ||||||||||||||    
T  21556559 agaaattcataattatg 21556543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 255 - 419
Target Start/End: Original strand, 816613 - 816777
Alignment:
Q  255 aaaattgaaattttgttcctagtaagcgtatactcactggtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatg 354  Q
    ||||||| |||||| || | |||||||||||||| || |||||||||| ||| |||||| || || |||||||  || ||| |||||||   ||||  ||    
T  816613 aaaattgcaattttatttcgagtaagcgtatacttacgggtcaaattttgtttcctaattttgtaggcatggtaggagcattataagaactatcactttg 816712  T
Q  355 aagttttgcagtttttaaacgagagacaaattaattataaattgtttaagtaattcataattatg 419  Q
    || ||||| |||||||||| |||||||||||||||||| ||||||||||  ||||||||||||||    
T  816713 aaattttggagtttttaaaggagagacaaattaattatgaattgtttaaaaaattcataattatg 816777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 256 - 419
Target Start/End: Original strand, 17373394 - 17373558
Alignment:
Q  256 aaattgaaattttgttcctagtaagcgtatactcactggtcaaatttcgttccctaatcttataagcatggtt-agaacataataagaatcttcacaatg 354  Q
    |||||| ||||||||||| | ||||||||||||||| ||||||||||| ||| ||||| || || |||||||| | ||||| |||||||  ||||| |||    
T  17373394 aaattgcaattttgttccaaataagcgtatactcacgggtcaaatttcattctctaattttgtaggcatggttaaaaacatcataagaacattcaccatg 17373493  T
Q  355 aagttttgcagtttttaaacgagagacaaattaattataaattgtttaagtaattcataattatg 419  Q
    || ||||| ||||| |||| | || || |||||||||  |||| |||| | ||||||||||||||    
T  17373494 aaattttggagtttctaaatgtgatacgaattaattacgaattttttaggaaattcataattatg 17373558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 226 - 419
Target Start/End: Original strand, 8058871 - 8059052
Alignment:
Q  226 ttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatactcactggtcaaatttcgttccctaatcttataagcatg 325  Q
    ||||||| |||||  ||| |||| |||||||| || ||||||||||||  ||||||||||||||||  ||||||||| |||||||||| || || |||||    
T  8058871 ttattttgatttttcaaccaaaacgtgcaaaa-ttaaaattttgttccgcgtaagcgtatactcacaagtcaaatttagttccctaattttgtaggcatg 8058969  T
Q  326 gttagaacataataagaatcttcacaatgaagttttgcagtttttaaacgagagacaaattaattataaattgtttaagtaattcataattatg 419  Q
               ||||||| |||| ||||||| ||| | ||| ||||||| |||  |||||||||||||||||||||||| ||||||||||||||    
T  8058970 -----------ataagaaccttcccaatgaaatttcgtagtctttaaacaagatgcaaattaattataaattgtttaagaaattcataattatg 8059052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 277 - 421
Target Start/End: Complemental strand, 25391568 - 25391425
Alignment:
Q  277 taagcgtatactcactggtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatgaagttttgcagtttttaaacga 376  Q
    ||||| |||||||| |||||||||||| ||| ||||| || || ||||||||||||||| ||||| |  ||||| || || ||||| |||||||||| ||    
T  25391568 taagcatatactca-tggtcaaatttcattcactaattttgtaggcatggttagaacatcataagtactttcaccataaaattttggagtttttaaagga 25391470  T
Q  377 gagacaaattaattataaattgtttaagtaattcataattatgga 421  Q
    || | || |||||||| ||||||||||  |||| |||||||||||    
T  25391469 gaaataagttaattatgaattgtttaaaaaatttataattatgga 25391425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 347 - 419
Target Start/End: Original strand, 15441832 - 15441904
Alignment:
Q  347 tcacaatgaagttttgcagtttttaaacgagagacaaattaattataaattgtttaagtaattcataattatg 419  Q
    |||| ||||| ||||| | |||||||| |||| ||||||||||||| ||||||||||| ||||||||||||||    
T  15441832 tcaccatgaaattttggattttttaaatgagacacaaattaattatgaattgtttaagaaattcataattatg 15441904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 122 - 181
Target Start/End: Original strand, 8322471 - 8322530
Alignment:
Q  122 ataaaggacgaaaacgttacctaaaaataagttatgggaccatttctgtaattttgccta 181  Q
    |||||||||||||| ||||||||||| ||||||| ||||| | |||||||||||||||||    
T  8322471 ataaaggacgaaaatgttacctaaaattaagttaagggacgaattctgtaattttgccta 8322530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 122 - 185
Target Start/End: Original strand, 27360410 - 27360473
Alignment:
Q  122 ataaaggacgaaaacgttacctaaaaataagttatgggaccatttctgtaattttgcctaaaaa 185  Q
    |||||||||||||| |||||||||||  |||||| ||||| | || ||||||||||||||||||    
T  27360410 ataaaggacgaaaatgttacctaaaataaagttaagggactaattgtgtaattttgcctaaaaa 27360473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 265 - 419
Target Start/End: Complemental strand, 37226654 - 37226501
Alignment:
Q  265 ttttgttcctagtaagcgtatactcactggtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatgaagttttgca 364  Q
    ||||||||  |||||||  |||||||  ||||||||||| ||||||||| |||  ||| |  ||| ||||||||||||| ||| || ||||| ||| | |    
T  37226654 ttttgttcggagtaagcaaatactcatgggtcaaatttctttccctaattttactagcttacttataacataataagaaactttaccatgaaatttagaa 37226555  T
Q  365 gtttttaaacgagagacaaattaattataaattgtttaagtaattcataattatg 419  Q
    | |||||||| || ||| || ||| ||| ||||||||||  ||||||||||||||    
T  37226554 gattttaaacaagggacgaa-taaatatgaattgtttaataaattcataattatg 37226501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 122 - 182
Target Start/End: Original strand, 30337717 - 30337777
Alignment:
Q  122 ataaaggacgaaaacgttacctaaaaataagttatgggaccatttctgtaattttgcctaa 182  Q
    ||||||||||| || |||| |||||| ||||||| ||||| | ||||||||||||||||||    
T  30337717 ataaaggacgataatgttatctaaaattaagttaagggactaattctgtaattttgcctaa 30337777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 366 - 420
Target Start/End: Original strand, 3843980 - 3844034
Alignment:
Q  366 tttttaaacgagagacaaattaattataaattgtttaagtaattcataattatgg 420  Q
    ||||||||  || |||||||||||| | |||||||||| ||||||||||||||||    
T  3843980 tttttaaattagggacaaattaattgtgaattgtttaaataattcataattatgg 3844034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 122 - 180
Target Start/End: Complemental strand, 17846065 - 17846007
Alignment:
Q  122 ataaaggacgaaaacgttacctaaaaataagttatgggaccatttctgtaattttgcct 180  Q
    |||||||||||||| |||||||||||  |||||| ||||| | || |||||||||||||    
T  17846065 ataaaggacgaaaatgttacctaaaataaagttaagggactaattgtgtaattttgcct 17846007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 386 - 419
Target Start/End: Complemental strand, 8147832 - 8147799
Alignment:
Q  386 taattataaattgtttaagtaattcataattatg 419  Q
    ||||||||||||||||||| ||||||||||||||    
T  8147832 taattataaattgtttaagaaattcataattatg 8147799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 122 - 179
Target Start/End: Complemental strand, 30337481 - 30337424
Alignment:
Q  122 ataaaggacgaaaacgttacctaaaaataagttatgggaccatttctgtaattttgcc 179  Q
    |||||||||||||| ||||||||||| |||||||  |||| | || ||||||||||||    
T  30337481 ataaaggacgaaaatgttacctaaaattaagttaatggactaattgtgtaattttgcc 30337424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 94; Significance: 1e-45; HSPs: 27)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 194 - 419
Target Start/End: Complemental strand, 28997401 - 28997177
Alignment:
Q  194 aaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatactcactg 293  Q
    ||||||| |||||||||| | | || || |||||||| | |||||  ||| |||| |||||||| |||||||||||||||  ||||||||||||||||      
T  28997401 aaagtttcatagcatttcgaagtcgtttaaatttattatgatttttcaaccaaaatgtgcaaaa-ttgaaattttgttccgcgtaagcgtatactcacaa 28997303  T
Q  294 gtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatgaagttttgcagtttttaaacgagagacaaattaattata 393  Q
    ||||||||| |||||||||| || || |||||  |||||||| ||||||| |||| || |||| ||||| ||| ||||||||||| ||||||||||||||    
T  28997302 gtcaaatttagttccctaattttgtaggcatgactagaacatgataagaaccttcgcagtgaaattttgtagtctttaaacgagatacaaattaattata 28997203  T
Q  394 aattgtttaagtaattcataattatg 419  Q
    ||||||||||| ||||||||||||||    
T  28997202 aattgtttaagaaattcataattatg 28997177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 194 - 417
Target Start/End: Original strand, 34948277 - 34948499
Alignment:
Q  194 aaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatactcactg 293  Q
    ||||||| ||||||| || | | || || |||||||||| |||||  |||  ||| |||||||| |||||||||||||||  ||||||||||||||||      
T  34948277 aaagtttcatagcatatcgaagtcgtttaaatttattttgatttttcaactgaaacgtgcaaaa-ttgaaattttgttccgcgtaagcgtatactcacaa 34948375  T
Q  294 gtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatgaagttttgcagtttttaaacgagagacaaattaattata 393  Q
    ||||||||| |||||||||| || || |||||  |||||||| | ||||| |||||||||||| ||||| | ||||||||||||| ||||||||||||||    
T  34948376 gtcaaatttagttccctaattttgtaggcatgactagaacatgacaagaaccttcacaatgaaattttgtaatttttaaacgagatacaaattaattata 34948475  T
Q  394 aattgtttaagtaattcataatta 417  Q
    ||||||||||| ||||||||||||    
T  34948476 aattgtttaagaaattcataatta 34948499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 188 - 419
Target Start/End: Complemental strand, 399297 - 399066
Alignment:
Q  188 atttgcaaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatac 287  Q
    ||||| ||||||| |||||||||| |   || || |||||||||| |||||  |||  ||| |||||||| |||||||||||||||  ||||||||||||    
T  399297 atttgtaaagtttcatagcatttcgaaatcgtttaaatttattttgatttttcaactgaaacgtgcaaaa-ttgaaattttgttccgcgtaagcgtatac 399199  T
Q  288 tcactggtcaaatttcgttccctaatcttataagcatggttagaacataataagaatc-ttcacaatgaagttttgcagtttttaaacgagagacaaatt 386  Q
    ||||  ||||||||| |||||||||| || || |||||  |||||||| ||||||| | ||||||||||| ||||| |  |||||||||||| |||||||    
T  399198 tcacaagtcaaatttagttccctaattttgtaggcatgactagaacatgataagaaacattcacaatgaaattttgtaaattttaaacgagatacaaatt 399099  T
Q  387 aattataaattgtttaagtaattcataattatg 419  Q
    |||||||||||||||||| ||||||||||||||    
T  399098 aattataaattgtttaagaaattcataattatg 399066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 255 - 419
Target Start/End: Original strand, 33228891 - 33229056
Alignment:
Q  255 aaaattgaaattttgttcctagtaagcgtatactcactggtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatg 354  Q
    |||||||||||||||||||  ||||| ||| ||||||  ||||||||| |||||||||| ||  | |||||  |||||||| ||||||| ||||||||||    
T  33228891 aaaattgaaattttgttccgcgtaagtgtacactcacaagtcaaatttagttccctaattttgcaggcatgactagaacatgataagaaccttcacaatg 33228990  T
Q  355 aagttttgcagtttttaaacgagagacaaattaattataaatt-gtttaagtaattcataattatg 419  Q
    || ||||| ||||||||||||||| |||||||||||||||||| ||||||| ||||||||||||||    
T  33228991 aaattttgtagtttttaaacgagatacaaattaattataaattagtttaagaaattcataattatg 33229056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 255 - 419
Target Start/End: Complemental strand, 29743896 - 29743731
Alignment:
Q  255 aaaattgaaattttgttcctagtaagcgtatactcactggtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatg 354  Q
    |||||||||||||||||||  ||||| ||||||||||  |||||||||  ||||||||| || || ||||| || |||||| |||||||  |||||||||    
T  29743896 aaaattgaaattttgttccgcgtaagtgtatactcacaagtcaaatttaattccctaattttgtaggcatgattggaacatgataagaacattcacaatg 29743797  T
Q  355 aagttttgcagtttttaaacgagagacaaattaattataaatt-gtttaagtaattcataattatg 419  Q
    || ||||| ||||||||||||||| ||||||||||||||| || ||||||| ||||||||||||||    
T  29743796 aaattttgtagtttttaaacgagatacaaattaattataagttagtttaagaaattcataattatg 29743731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 191 - 425
Target Start/End: Complemental strand, 28931683 - 28931450
Alignment:
Q  191 tgcaaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatactca 290  Q
    ||||||||||  ||||||||||| |||  ||| ||||||||| |||||  ||| |||| |||| ||| ||| |||||||||||  ||||||||||||| |    
T  28931683 tgcaaagtttcgtagcatttcaaagacatttcgatttattttaatttttgaaccaaaatgtgcgaaa-ttgcaattttgttccgtgtaagcgtatactta 28931585  T
Q  291 ctggtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatgaagttttgcagtttttaaacgagagacaaattaatt 390  Q
    | ||||||||||||||| ||||| || || ||||||||||||  | |||| ||||||||  ||| | ||||| ||||||||||| ||| | |||||||||    
T  28931584 cgggtcaaatttcgttctctaattttgtaggcatggttagaaggtcataacaatcttcaacatgcaattttgaagtttttaaacaagataaaaattaatt 28931485  T
Q  391 ataaattgtttaagtaattcataattatggaaaat 425  Q
    || |||| |||| | ||||||||||||||| ||||    
T  28931484 atgaattatttacgaaattcataattatgggaaat 28931450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 194 - 419
Target Start/End: Complemental strand, 13838472 - 13838245
Alignment:
Q  194 aaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatactcac-- 291  Q
    ||||||| ||| |||||| | | || || |||||||||| |||||  ||| |||| |||||||| |||||||||||||||  ||||||||||||||||      
T  13838472 aaagtttcataacatttcgaagtcgtttaaatttattttgatttttcaactaaaacgtgcaaaa-ttgaaattttgttccgcgtaagcgtatactcacaa 13838374  T
Q  292 -tggtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatgaagttttgcagtttttaaacgagagacaaattaatt 390  Q
     || || ||||| |||||||||| || ||  ||||  | ||||   ||||||| |||||||||||| ||||| | ||||||||||| | |||||||||||    
T  13838373 gtgatcgaatttagttccctaattttgtagacatgactggaactagataagaaccttcacaatgaaattttgtaatttttaaacgatatacaaattaatt 13838274  T
Q  391 ataaattgtttaagtaattcataattatg 419  Q
    |||||||||||||  ||||||||||||||    
T  13838273 ataaattgtttaataaattcataattatg 13838245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 191 - 420
Target Start/End: Complemental strand, 10231975 - 10231747
Alignment:
Q  191 tgcaaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatactca 290  Q
    |||||| ||| |||| ||||||| || | ||| |||| ||||||||||  ||| |||| |||  ||| ||| ||||||||||  ||||| | |||| |||    
T  10231975 tgcaaaatttcatagtatttcaaagatgtttcgatttctttttatttttcaaccaaaacgtgtgaaa-ttgcaattttgttctgagtaaacatatattca 10231877  T
Q  291 ctggtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatgaagttttgcagtttttaaacgagagacaaattaatt 390  Q
    |  |||||||||||||  ||||| || || ||||||||||||||  ||||||| |||||| ||||| ||||| || ||||||| |||| || ||||||||    
T  10231876 cgagtcaaatttcgttttctaattttctaggcatggttagaacaacataagaaccttcaccatgaaattttgaagattttaaatgagatacgaattaatt 10231777  T
Q  391 ataaattgtttaagtaattcataattatgg 420  Q
    || ||||||||||| |||||||||||||||    
T  10231776 attaattgtttaagaaattcataattatgg 10231747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 193 - 343
Target Start/End: Complemental strand, 23217600 - 23217452
Alignment:
Q  193 caaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatactcact 292  Q
    |||||||| ||| |||||| | || | || |||||||||||||||| || ||||| | || ||||||||||||||||||||||||||  ||||||||       
T  23217600 caaagtttcatatcatttcgaagatgttttaatttatttttatttttaaccaaaacg-tg-aaaaattgaaattttgttcctagtaattgtatactctta 23217503  T
Q  293 ggtcaaatttcgttccctaatcttataagcatggttagaacataataagaa 343  Q
    |||||||||||||||| |||| || || |||||||||||||||||||||||    
T  23217502 ggtcaaatttcgttccttaattttgtaggcatggttagaacataataagaa 23217452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 122 - 179
Target Start/End: Original strand, 21424643 - 21424700
Alignment:
Q  122 ataaaggacgaaaacgttacctaaaaataagttatgggaccatttctgtaattttgcc 179  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21424643 ataaaggacgaaaacgttacctaaaaataagttatgggaccatttctgtaattttgcc 21424700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 263 - 425
Target Start/End: Original strand, 31373247 - 31373409
Alignment:
Q  263 aattttgttcctagtaagcgtatactcactggtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatgaagttttg 362  Q
    ||||||||| | |||| || |||||| || | |||||||  |||||||||| || || ||| ||||| ||||| ||||||| ||||||||  || |||||    
T  31373247 aattttgtttcgagtaggcatatactaacggatcaaattcagttccctaattttgtaggcaaggttaaaacatcataagaaccttcacaacaaaattttg 31373346  T
Q  363 cagtttttaaacgagagacaaattaattataaattgtttaagtaattcataattatggaaaat 425  Q
     |||||||||||||| ||  |||||||||| ||||||||||| ||||||||||| ||| ||||    
T  31373347 aagtttttaaacgagtgatgaattaattatgaattgtttaagaaattcataattttgggaaat 31373409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 19 - 90
Target Start/End: Original strand, 21424481 - 21424549
Alignment:
Q  19 cttgcaggttgaagggtgactgagaagaagaagcttgtgtgaacattggagaagatgaacataaagttaaat 90  Q
    ||||||||||||||||||| ||||||   ||||||||||||||||||||||||||||||||||| |||||||    
T  21424481 cttgcaggttgaagggtgattgagaa---gaagcttgtgtgaacattggagaagatgaacataacgttaaat 21424549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 126 - 182
Target Start/End: Complemental strand, 21419364 - 21419308
Alignment:
Q  126 aggacgaaaacgttacctaaaaataagttatgggaccatttctgtaattttgcctaa 182  Q
    ||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||    
T  21419364 aggacgaaaacgttacctaaaaataagttataggaccatttgtgtaattttgcctaa 21419308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 368 - 419
Target Start/End: Complemental strand, 18339592 - 18339541
Alignment:
Q  368 tttaaacgagagacaaattaattataaattgtttaagtaattcataattatg 419  Q
    ||||||||||| ||||||||||||||||||||||||| ||||||||||||||    
T  18339592 tttaaacgagatacaaattaattataaattgtttaagaaattcataattatg 18339541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 266 - 420
Target Start/End: Complemental strand, 12098590 - 12098436
Alignment:
Q  266 tttgttcctagtaagcgtatactcactggtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatgaagttttgcag 365  Q
    |||||||| ||||||| ||||||||  | ||||||||| ||||||  | || ||  ||||||| |||||| | || || ||| || ||||| ||||  ||    
T  12098590 tttgttccgagtaagcatatactcaaggatcaaatttcattcccttgttttttagacatggtttgaacatcaaaaaaacctttaccatgaaattttaaag 12098491  T
Q  366 tttttaaacgagagacaaattaattataaattgtttaagtaattcataattatgg 420  Q
    |||||||| | | |||||||||||||| |||| |||||| |||||||||||||||    
T  12098490 tttttaaatgcgggacaaattaattatgaattatttaagaaattcataattatgg 12098436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 266 - 420
Target Start/End: Original strand, 12849947 - 12850101
Alignment:
Q  266 tttgttcctagtaagcgtatactcactggtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatgaagttttgcag 365  Q
    |||||||| ||||||  |||| |||| | ||||||||  ||||||  | || || |||||||| |||||| | ||||| ||| || ||||| ||||  ||    
T  12849947 tttgttccgagtaagtatatattcacggatcaaattttattcccttcttttttaggcatggtttgaacatcaaaagaacctttaccatgaaattttagag 12850046  T
Q  366 tttttaaacgagagacaaattaattataaattgtttaagtaattcataattatgg 420  Q
    |||||||| | | || ||||||||||| ||||||||||| |||||||||||||||    
T  12850047 tttttaaatgcgggataaattaattatgaattgtttaagaaattcataattatgg 12850101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 122 - 179
Target Start/End: Complemental strand, 10026197 - 10026140
Alignment:
Q  122 ataaaggacgaaaacgttacctaaaaataagttatgggaccatttctgtaattttgcc 179  Q
    ||||||||| |||||||||||||||| ||||||| ||||| |||| ||||||||||||    
T  10026197 ataaaggactaaaacgttacctaaaattaagttaagggactatttatgtaattttgcc 10026140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 326 - 417
Target Start/End: Original strand, 22814710 - 22814801
Alignment:
Q  326 gttagaacataataagaatcttcacaatgaagttttgcagtttttaaacgagagacaaattaattataaattgtttaagtaattcataatta 417  Q
    |||||||||| ||||||| |  ||| ||||| ||||  |||||||||| || |||| |||||||||| ||||||||||| |||||| |||||    
T  22814710 gttagaacatcataagaaccgccaccatgaaattttcaagtttttaaatgatagacgaattaattatgaattgtttaagaaattcaaaatta 22814801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 364 - 425
Target Start/End: Original strand, 4335187 - 4335248
Alignment:
Q  364 agtttttaaacgagagacaaattaattataaattgtttaagtaattcataattatggaaaat 425  Q
    ||||||| ||||||  ||||||||||||| ||||||||||| ||||||||||| | ||||||    
T  4335187 agtttttgaacgaggaacaaattaattatgaattgtttaagaaattcataattgttgaaaat 4335248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 122 - 182
Target Start/End: Original strand, 10027124 - 10027184
Alignment:
Q  122 ataaaggacgaaaacgttacctaaaaataagttatgggaccatttctgtaattttgcctaa 182  Q
    ||||||||| |||| ||||||||||| ||||||| ||||| |||| ||||||| |||||||    
T  10027124 ataaaggaccaaaatgttacctaaaattaagttaagggactatttatgtaattatgcctaa 10027184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 188 - 420
Target Start/End: Complemental strand, 11797172 - 11796942
Alignment:
Q  188 atttgcaaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatac 287  Q
    ||||||||||||| ||||||||||||  | |  || |||||||||||||||  |||  ||| |||| ||| |||  |||| ||| | ||||||| |||||    
T  11797172 atttgcaaagtttgatagcatttcaaatatgtctcgatttatttttatttttcaaccgaaacgtgcgaaa-ttgttattt-gtttcgagtaagcatatac 11797075  T
Q  288 tcactggtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatgaagttttgcagtttttaaacgagagacaaatta 387  Q
    |||| | ||||||| ||||||||  | || ||  ||||||| | |||| |||||||| | ||  ||||| ||||  |||||||||||  |  ||||||||    
T  11797074 tcacggatcaaattgcgttcccttgttttttagacatggtttggacatcataagaatttacatcatgaaattttagagtttttaaacacggaacaaatta 11796975  T
Q  388 attataaattgtttaagtaattcataattatgg 420  Q
    ||||| |||| |||||| |||| ||||| ||||    
T  11796974 attatgaattatttaagaaatttataatgatgg 11796942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 331 - 397
Target Start/End: Complemental strand, 4335318 - 4335252
Alignment:
Q  331 aacataataagaatcttcacaatgaagttttgcagtttttaaacgagagacaaattaattataaatt 397  Q
    ||||| |||| || |||||| || || ||||| ||||||||||||||||| ||||||||||| ||||    
T  4335318 aacatcataataaacttcaccattaaattttgtagtttttaaacgagagataaattaattatcaatt 4335252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 122 - 184
Target Start/End: Original strand, 33595608 - 33595670
Alignment:
Q  122 ataaaggacgaaaacgttacctaaaaataagttatgggaccatttctgtaattttgcctaaaa 184  Q
    |||||||||||||  |||||||||||  |||||| ||||| | || |||||||||||||||||    
T  33595608 ataaaggacgaaagtgttacctaaaataaagttaagggactaattgtgtaattttgcctaaaa 33595670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 118 - 178
Target Start/End: Complemental strand, 3218212 - 3218152
Alignment:
Q  118 aaaaataaaggacgaaaacgttacctaaaaataagttatgggaccatttctgtaattttgc 178  Q
    |||||||||||||||||  |||||||||||  |||||| ||||| | || |||||||||||    
T  3218212 aaaaataaaggacgaaagtgttacctaaaataaagttaagggactaattgtgtaattttgc 3218152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 122 - 190
Target Start/End: Original strand, 3922827 - 3922895
Alignment:
Q  122 ataaaggacgaaaacgttacctaaaaataagttatgggaccatttctgtaattttgcctaaaaacaatt 190  Q
    |||||||||||||  |||||||||||  |||||| ||||| | || |||||||||||| ||||| ||||    
T  3922827 ataaaggacgaaagtgttacctaaaataaagttaagggactaattgtgtaattttgccaaaaaaaaatt 3922895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 297 - 420
Target Start/End: Original strand, 18261819 - 18261943
Alignment:
Q  297 aaatttcgttccctaatcttataagcatggtt-agaacataataagaatcttcacaatgaagttttgcagtttttaaacgagagacaaattaattataaa 395  Q
    ||||||||||| ||||| ||||| ||||| || ||||||| |||| ||  ||||  ||||| |||||   | |||||| ||| |||| ||||| ||| ||    
T  18261819 aaatttcgttcactaattttatatgcatgctttagaacatcataataacattcaacatgaaattttgatatgtttaaatgagggacatattaaatatgaa 18261918  T
Q  396 ttgtttaagtaattcataattatgg 420  Q
    ||||||||| |||| ||||||||||    
T  18261919 ttgtttaaggaatttataattatgg 18261943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 377 - 417
Target Start/End: Complemental strand, 29341528 - 29341488
Alignment:
Q  377 gagacaaattaattataaattgtttaagtaattcataatta 417  Q
    |||||||||||||||| ||||||||||  ||||||||||||    
T  29341528 gagacaaattaattatgaattgtttaaaaaattcataatta 29341488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 94; Significance: 1e-45; HSPs: 46)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 194 - 419
Target Start/End: Original strand, 15959441 - 15959665
Alignment:
Q  194 aaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatactcactg 293  Q
    ||||||| |||||||||||| |  | || |||||||||| |||||  ||| |||| |||||||| |||||||||||||||   ||||||||||||||| |    
T  15959441 aaagtttcatagcatttcaaagttgtttaaatttattttgatttttcaaccaaaacgtgcaaaa-ttgaaattttgttccgcataagcgtatactcacag 15959539  T
Q  294 gtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatgaagttttgcagtttttaaacgagagacaaattaattata 393  Q
    ||||||||| |||||| ||| || || |||||  |||||||| ||||||| |||||||||||| ||||| ||||||||||||||   |||||||||||||    
T  15959540 gtcaaatttagttcccaaattttgtaggcatgactagaacatgataagaaccttcacaatgaaattttgtagtttttaaacgagctgcaaattaattata 15959639  T
Q  394 aattgtttaagtaattcataattatg 419  Q
    ||||| ||||| ||||||||||||||    
T  15959640 aattgattaagaaattcataattatg 15959665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 194 - 419
Target Start/End: Complemental strand, 31681038 - 31680814
Alignment:
Q  194 aaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatactcactg 293  Q
    ||||||| |||||||||| | | || || |||||||| | |||||  ||| |||| |||||||| |||||||||||||||  ||||||||||||||||      
T  31681038 aaagtttcatagcatttcgaagtcgtttaaatttattatgatttttcaaccaaaacgtgcaaaa-ttgaaattttgttccgcgtaagcgtatactcacaa 31680940  T
Q  294 gtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatgaagttttgcagtttttaaacgagagacaaattaattata 393  Q
    ||||||||| |||||||||| || || |||||  |||||||| ||||||| |||| || |||| ||||| ||| ||||||||||| ||||||||||||||    
T  31680939 gtcaaatttagttccctaattttgtaggcatgactagaacatgataagaaccttcgcagtgaaattttgtagtctttaaacgagatacaaattaattata 31680840  T
Q  394 aattgtttaagtaattcataattatg 419  Q
    ||||||||||| ||||||||||||||    
T  31680839 aattgtttaagaaattcataattatg 31680814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 194 - 419
Target Start/End: Complemental strand, 33430992 - 33430768
Alignment:
Q  194 aaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatactcactg 293  Q
    ||||||| |||||||||| | | || || |||||||| | |||||  ||| |||| |||||||| |||||||||||||||  ||||||||||||||||      
T  33430992 aaagtttcatagcatttcgaagtcgtttaaatttattatgatttttcaaccaaaacgtgcaaaa-ttgaaattttgttccgcgtaagcgtatactcacaa 33430894  T
Q  294 gtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatgaagttttgcagtttttaaacgagagacaaattaattata 393  Q
    ||||||||| |||||||||| || || |||||  |||||||| ||||||| |||| || |||| ||||| ||| ||||||||||| ||||||||||||||    
T  33430893 gtcaaatttagttccctaattttgtaggcatgactagaacatgataagaaccttcgcagtgaaattttgtagtctttaaacgagatacaaattaattata 33430794  T
Q  394 aattgtttaagtaattcataattatg 419  Q
    ||||||||||| ||||||||||||||    
T  33430793 aattgtttaagaaattcataattatg 33430768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 93; E-Value: 5e-45
Query Start/End: Original strand, 256 - 420
Target Start/End: Complemental strand, 192517 - 192353
Alignment:
Q  256 aaattgaaattttgttcctagtaagcgtatactcactggtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatga 355  Q
    |||||||||||||||||| ||||| ||||||||||  |||||||||| |||||||||| ||||| |||||   ||||||| ||||||| ||| |||||||    
T  192517 aaattgaaattttgttccgagtaaacgtatactcataggtcaaatttagttccctaattttataggcatgacgagaacatgataagaaccttaacaatga 192418  T
Q  356 agttttgcagtttttaaacgagagacaaattaattataaattgtttaagtaattcataattatgg 420  Q
    | ||||| |||||||||| |||| ||||||||||||||||||||||||| |||||||||||||||    
T  192417 aattttgtagtttttaaatgagatacaaattaattataaattgtttaagaaattcataattatgg 192353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 255 - 414
Target Start/End: Complemental strand, 23034586 - 23034427
Alignment:
Q  255 aaaattgaaattttgttcctagtaagcgtatactcactggtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatg 354  Q
    |||||| |||||||||||||||||||||||||||||| ||||||||||| |||| |||| || || ||||| ||| |||||||||||||  ||||||||     
T  23034586 aaaattaaaattttgttcctagtaagcgtatactcacaggtcaaatttcattccttaattttgtaggcatgattataacataataagaactttcacaatt 23034487  T
Q  355 aagttttgcagtttttaaacgagagacaaattaattataaattgtttaagtaattcataa 414  Q
    || ||||  |||||| |||||||||||||||||||||||||||||||||| |||||||||    
T  23034486 aaattttatagttttaaaacgagagacaaattaattataaattgtttaagaaattcataa 23034427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 194 - 419
Target Start/End: Complemental strand, 13818650 - 13818426
Alignment:
Q  194 aaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatactcactg 293  Q
    ||||||| |||||||||| | | || || |||||||||| |||||  ||   ||| |||||||| ||||| |||||||||  ||||||||||||||||      
T  13818650 aaagtttcatagcatttcgaagtcgtttaaatttattttgatttttcaattgaaacgtgcaaaa-ttgaagttttgttccgcgtaagcgtatactcacaa 13818552  T
Q  294 gtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatgaagttttgcagtttttaaacgagagacaaattaattata 393  Q
    ||||||||| |||||||||| || || |||||  |||||||| ||||||| |||||||||||| ||||| | ||||||||||||| ||||||||||||||    
T  13818551 gtcaaatttagttccctaattttgtaggcatgactagaacatgataagaaccttcacaatgaaattttgtaatttttaaacgagatacaaattaattata 13818452  T
Q  394 aattgtttaagtaattcataattatg 419  Q
    || |||||||| ||||||||||||||    
T  13818451 aactgtttaagaaattcataattatg 13818426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 194 - 419
Target Start/End: Original strand, 31501214 - 31501438
Alignment:
Q  194 aaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatactcactg 293  Q
    ||||||| |||||||||| | |  | || |||||||||| |||||  ||| |||| |||||||| |||||||||||||||  ||||||||||||||||      
T  31501214 aaagtttcatagcatttcgaagttgtttaaatttattttgatttttcaaccaaaacgtgcaaaa-ttgaaattttgttccgcgtaagcgtatactcacaa 31501312  T
Q  294 gtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatgaagttttgcagtttttaaacgagagacaaattaattata 393  Q
    ||||||||| |||||||||| || || |||||  |||||||| ||||||| | |||||||||| || || ||| ||||||| ||| ||||||||||||||    
T  31501313 gtcaaatttagttccctaattttgtaggcatgactagaacatgataagaaccatcacaatgaaattatgtagtctttaaacaagatacaaattaattata 31501412  T
Q  394 aattgtttaagtaattcataattatg 419  Q
    ||||||||||| ||||||||||||||    
T  31501413 aattgtttaagaaattcataattatg 31501438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 188 - 417
Target Start/End: Original strand, 26282805 - 26283034
Alignment:
Q  188 atttgcaaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatac 287  Q
    ||||| ||||||| |||||||||| |   || || |||||||||| |||||  |||  ||| |||||||| |||||||||||||||  ||||||||||||    
T  26282805 atttgtaaagtttcatagcatttcgaaatcgtttaaatttattttgatttttcaactgaaacgtgcaaaa-ttgaaattttgttccgcgtaagcgtatac 26282903  T
Q  288 tcactggtcaaatttcgttccctaatcttataagcatggttagaacataataagaatc-ttcacaatgaagttttgcagtttttaaacgagagacaaatt 386  Q
    ||||  ||||||||| |||||||||| || || |||||  |||||||| ||||||| | ||||||||||| ||||| |  |||||||||||| |||||||    
T  26282904 tcacaagtcaaatttagttccctaattttgtaggcatgactagaacatgataagaaacattcacaatgaaattttgtaaattttaaacgagatacaaatt 26283003  T
Q  387 aattataaattgtttaagtaattcataatta 417  Q
    |||||||||||||||||| ||||||||||||    
T  26283004 aattataaattgtttaagaaattcataatta 26283034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 194 - 419
Target Start/End: Original strand, 39657022 - 39657249
Alignment:
Q  194 aaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatactcac-- 291  Q
    ||||||| |||||||||| | | || || |||||||||| |||||  |||  ||| |||||||| |||||||||||||||  ||||| ||||||||||      
T  39657022 aaagtttcatagcatttcgaagtcgtttaaatttattttgattttttaactgaaacgtgcaaaa-ttgaaattttgttccgcgtaagtgtatactcacaa 39657120  T
Q  292 -tggtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatgaagttttgcagtttttaaacgagagacaaattaatt 390  Q
     || |||||||| |||||||||| || || |||||  |||||||| ||||||| |||||||||||| ||||| | ||||||||||||| |||||||||||    
T  39657121 gtgatcaaatttagttccctaattttgtaggcatgactagaacatgataagaaccttcacaatgaaattttgtaatttttaaacgagatacaaattaatt 39657220  T
Q  391 ataaattgtttaagtaattcataattatg 419  Q
    |||||||||||||  ||||||||||||||    
T  39657221 ataaattgtttaataaattcataattatg 39657249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 255 - 419
Target Start/End: Complemental strand, 31272018 - 31271854
Alignment:
Q  255 aaaattgaaattttgttcctagtaagcgtatactcactggtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatg 354  Q
    |||||||||||||||||||||| ||| ||||||||||  |||||| || |||| ||||| |  ||  ||||| |||||||||||||||| ||||| |||     
T  31272018 aaaattgaaattttgttcctagcaagtgtatactcacaagtcaaaatttgttcactaatttggtagccatggctagaacataataagaaccttcagaata 31271919  T
Q  355 aagttttgcagtttttaaacgagagacaaattaattataaattgtttaagtaattcataattatg 419  Q
    ||||||| ||||||| |||||||||||||||||||||||||| ||||||| ||||||||||||||    
T  31271918 aagtttttcagttttgaaacgagagacaaattaattataaatggtttaagaaattcataattatg 31271854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 188 - 419
Target Start/End: Original strand, 36293108 - 36293339
Alignment:
Q  188 atttgcaaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatac 287  Q
    ||||| ||||||| |||||||||| | | || || |||||||||| |||||  |||  ||| |||||||| |||||||||||||||  ||||||||||||    
T  36293108 atttgtaaagtttcatagcatttcgaagtcgtttaaatttattttgatttttcaactgaaacgtgcaaaa-ttgaaattttgttccgcgtaagcgtatac 36293206  T
Q  288 tcactggtcaaatttcgttccctaatcttataagcatggttagaacataataagaatc-ttcacaatgaagttttgcagtttttaaacgagagacaaatt 386  Q
    ||||  ||||||||| ||| |||||| || || |||||  |||||||| ||||||| | ||||||||||| ||||| |  |||||||||||| |||||||    
T  36293207 tcacaagtcaaatttagtttcctaattttgtaggcatgactagaacatgataagaaaccttcacaatgaaattttgtaaattttaaacgagatacaaatt 36293306  T
Q  387 aattataaattgtttaagtaattcataattatg 419  Q
    ||||||||||| |||||| ||||||||||||||    
T  36293307 aattataaattatttaagaaattcataattatg 36293339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 194 - 419
Target Start/End: Original strand, 1775871 - 1776094
Alignment:
Q  194 aaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatactcactg 293  Q
    ||||||| |||||||||| | | || || |||||||||| |||||  |||  ||| |||||||| |||||||||||||||  ||||||||||||||||      
T  1775871 aaagtttcatagcatttcgaagtcgtttaaatttattttgatttttcaactcaaacgtgcaaaa-ttgaaattttgttccgcgtaagcgtatactcacaa 1775969  T
Q  294 gtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatgaagttttgcagtttttaaacgagagacaaattaattata 393  Q
    | |||||||  ||| ||||| || || |||||  |||||||| ||||||| |||||||||||| ||||| | ||||||||||||| ||| ||||||||||    
T  1775970 g-caaatttaattctctaattttttaggcatgactagaacatgataagaaccttcacaatgaaattttgtaatttttaaacgagatacagattaattata 1776068  T
Q  394 aattgtttaagtaattcataattatg 419  Q
    ||||||||||| ||||||||||||||    
T  1776069 aattgtttaagaaattcataattatg 1776094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 194 - 419
Target Start/End: Original strand, 16333395 - 16333619
Alignment:
Q  194 aaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatactcactg 293  Q
    ||||||| ||||||| || | | || || |||||||||| |||||  |||  ||| |||||||| |||||||||||||||  ||||||||||||||||      
T  16333395 aaagtttcatagcatatcgaagtcgtttaaatttattttgatttttcaactgaaacgtgcaaaa-ttgaaattttgttccgcgtaagcgtatactcacaa 16333493  T
Q  294 gtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatgaagttttgcagtttttaaacgagagacaaattaattata 393  Q
    ||||||||| |||||||||| || ||||||||  || || || ||||||| |||| ||||||| ||||| | ||||||||| ||| ||||||||||||||    
T  16333494 gtcaaatttagttccctaattttgtaagcatgactaaaatatgataagaaccttcccaatgaaattttgtaatttttaaacaagatacaaattaattata 16333593  T
Q  394 aattgtttaagtaattcataattatg 419  Q
    |||| |||||| ||||||||||||||    
T  16333594 aattttttaagaaattcataattatg 16333619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 275 - 419
Target Start/End: Complemental strand, 10034495 - 10034351
Alignment:
Q  275 agtaagcgtatactcactggtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatgaagttttgcagtttttaaac 374  Q
    |||||||||||||||||  ||||||||| |||||||||| || || |||||  |||||||| ||||||| |||||||||||| ||||  | |||||||||    
T  10034495 agtaagcgtatactcacaagtcaaatttagttccctaattttgtaggcatgactagaacatgataagaaccttcacaatgaaattttataatttttaaac 10034396  T
Q  375 gagagacaaattaattataaattgtttaagtaattcataattatg 419  Q
    |||| ||||||||||||||||||||||||| ||||||||||||||    
T  10034395 gagatacaaattaattataaattgtttaagaaattcataattatg 10034351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 255 - 419
Target Start/End: Original strand, 12278412 - 12278576
Alignment:
Q  255 aaaattgaaattttgttcctagtaagcgtatactcactggtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatg 354  Q
    |||||| ||||||||||||  ||||||| ||||||||  ||||||||| |||||||||| || || |||||  |||||||| ||||||| ||||||| ||    
T  12278412 aaaattaaaattttgttccgcgtaagcgaatactcacaagtcaaatttagttccctaattttgtaggcatgactagaacatgataagaaccttcacagtg 12278511  T
Q  355 aagttttgcagtttttaaacgagagacaaattaattataaattgtttaagtaattcataattatg 419  Q
    || ||||| | | ||||||||||| ||||||||||||||||||||||||| ||||||||||||||    
T  12278512 aaattttgtaatctttaaacgagatacaaattaattataaattgtttaagaaattcataattatg 12278576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 222 - 420
Target Start/End: Original strand, 38268944 - 38269130
Alignment:
Q  222 caatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatactcactggtcaaatttcgttccctaatcttataag 321  Q
    ||||||||||| |||||  ||| |||| |||||||| ||||||||||||||| |||||||||||||| || |||||||||| |||||||||| || || |    
T  38268944 caatttattttgatttttcaaccaaaacgtgcaaaa-ttgaaattttgttccgagtaagcgtatacttacaggtcaaatttagttccctaattttgtagg 38269042  T
Q  322 catggttagaacataataagaatcttcacaatgaagttttgcagtttttaaacgagagacaaattaattataaattgtttaagtaattcataattatgg 420  Q
    ||||           ||||||| |||||||||||| ||||| |||||||| |||||| ||||||||||||||||||||||||| |||||||||||||||    
T  38269043 catg-----------ataagaaccttcacaatgaaattttgtagtttttatacgagatacaaattaattataaattgtttaagaaattcataattatgg 38269130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 255 - 417
Target Start/End: Complemental strand, 37255216 - 37255054
Alignment:
Q  255 aaaattgaaattttgttcctagtaagcgtatactcactggtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatg 354  Q
    |||||||||||||||||||  ||||||||||||||||  ||||||||| |||||||||| || || |||||  |||||||| ||||||| ||||  | ||    
T  37255216 aaaattgaaattttgttccgcgtaagcgtatactcacaagtcaaatttagttccctaattttgtaggcatgactagaacatgataagaaccttccgagtg 37255117  T
Q  355 aagttttgcagtttttaaacgagagacaaattaattataaattgtttaagtaattcataatta 417  Q
    || ||||| ||| ||||||||||| |||||||||||||||||| |||||| ||||||||||||    
T  37255116 aaattttgtagtctttaaacgagatacaaattaattataaattatttaagaaattcataatta 37255054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 194 - 419
Target Start/End: Original strand, 17332115 - 17332339
Alignment:
Q  194 aaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatactcactg 293  Q
    ||||||| |||||||||  | | || || |||||||| | |||||  ||| |||| |||||||| |||||||||||||||  |||||| ||||||| |      
T  17332115 aaagtttcatagcattttgaagtcgtttaaatttattatgatttttcaaccaaaacgtgcaaaa-ttgaaattttgttccgcgtaagcatatactcgcaa 17332213  T
Q  294 gtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatgaagttttgcagtttttaaacgagagacaaattaattata 393  Q
    ||||||||| ||||| |||| || || |||||  |||||||| ||||||| |||||||||||| ||||| ||| ||||||| ||| ||||||||||||||    
T  17332214 gtcaaatttagttccttaattttgtaggcatgactagaacatgataagaaccttcacaatgaaattttgtagtctttaaacaagatacaaattaattata 17332313  T
Q  394 aattgtttaagtaattcataattatg 419  Q
    ||||| ||||| ||||||||||||||    
T  17332314 aattgcttaagaaattcataattatg 17332339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 188 - 419
Target Start/End: Complemental strand, 39435376 - 39435145
Alignment:
Q  188 atttgcaaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatac 287  Q
    ||||| ||||||| |||||||||| | | || || |||||||||| |||||  |||  |||  ||||||| |||||||||||||||  |||||| |||||    
T  39435376 atttgtaaagtttcatagcatttcgaagtcgtttaaatttattttgatttttcaactgaaacatgcaaaa-ttgaaattttgttccgcgtaagcttatac 39435278  T
Q  288 tcactggtcaaatttcgttccctaatcttataagcatggttagaacataataagaatc-ttcacaatgaagttttgcagtttttaaacgagagacaaatt 386  Q
     |||  ||||||||| |||||||||| || || | |||  |||||||| ||||||| | ||||||||||| ||||| |  |||||||||||| |||||||    
T  39435277 ccacaagtcaaatttagttccctaattttgtaggtatgactagaacatgataagaaaccttcacaatgaaattttgtaaattttaaacgagatacaaatt 39435178  T
Q  387 aattataaattgtttaagtaattcataattatg 419  Q
    |||||||||||||||||| ||||||||||||||    
T  39435177 aattataaattgtttaagaaattcataattatg 39435145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 255 - 419
Target Start/End: Complemental strand, 36291982 - 36291818
Alignment:
Q  255 aaaattgaaattttgttcctagtaagcgtatactcactggtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatg 354  Q
    |||||||||||||||||||  ||||| |||||||||   ||||||||| |||||||||| || || |||||  |||||||| ||||||| |||||||||     
T  36291982 aaaattgaaattttgttccgcgtaagtgtatactcataagtcaaatttagttccctaattttgtaggcatgactagaacatgataagaaccttcacaata 36291883  T
Q  355 aagttttgcagtttttaaacgagagacaaattaattataaatt-gtttaagtaattcataattatg 419  Q
    || ||||  ||||||||||||||| ||||||||||||||| || ||||||| ||||||||||||||    
T  36291882 aaattttatagtttttaaacgagatacaaattaattataagttagtttaag-aattcataattatg 36291818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 255 - 394
Target Start/End: Complemental strand, 43069468 - 43069329
Alignment:
Q  255 aaaattgaaattttgttcctagtaagcgtatactcactggtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatg 354  Q
    |||||||||||||||||||  ||||| ||||||||||  ||||||||| |||||||||| ||  |  ||||  |||||||| ||||||| ||||| ||||    
T  43069468 aaaattgaaattttgttccgcgtaagtgtatactcacaagtcaaatttagttccctaattttgcagacatgactagaacatgataagaaccttcaaaatg 43069369  T
Q  355 aagttttgcagtttttaaacgagagacaaattaattataa 394  Q
    || ||||| ||||||||||||||| |||||||||||||||    
T  43069368 aaattttgtagtttttaaacgagatacaaattaattataa 43069329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 180 - 419
Target Start/End: Complemental strand, 16155683 - 16155446
Alignment:
Q  180 taaaaacaatttgcaaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgtt-cctagta 278  Q
    ||||||| || || ||||||| |||||||||| | | || || |||||||||| |||||  |||  ||| |||||||| ||||| |||| || ||  ||     
T  16155683 taaaaacgatctgtaaagtttcatagcatttcgaagtcgtttaaatttattttgatttttcaactgaaacgtgcaaaa-ttgaatttttttttccgtgtg 16155585  T
Q  279 agcgtatactcactggtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatgaagttttgcagtttttaaacgaga 378  Q
    |||||||||||||  ||||||||| |||||||||| || || |||||  |||||||| ||||||| ||||||||| |  ||||  | |||||||||||||    
T  16155584 agcgtatactcacaagtcaaatttagttccctaattttgtaggcatgactagaacatgataagaaccttcacaataatattttataatttttaaacgaga 16155485  T
Q  379 gacaaattaattataaattgtttaagtaattcataattatg 419  Q
      |||||||||||||||||| ||||| ||||||||||||||    
T  16155484 --caaattaattataaattggttaagaaattcataattatg 16155446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 351 - 420
Target Start/End: Original strand, 30297604 - 30297673
Alignment:
Q  351 aatgaagttttgcagtttttaaacgagagacaaattaattataaattgtttaagtaattcataattatgg 420  Q
    |||||| |||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  30297604 aatgaattttttcagtttttaaacgagagacaaattaattataaattgtttaagaaattcataattatgg 30297673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 255 - 420
Target Start/End: Complemental strand, 27750846 - 27750683
Alignment:
Q  255 aaaattgaaattttgttcctagtaagcgtatactcactggtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatg 354  Q
    ||||||| |||||| |||| ||||||| ||||||||  ||||||||||  |||||||||  | ||  |||||||||||||| |||| ||  ||||| | |    
T  27750846 aaaattgcaattttcttccgagtaagcatatactcatgggtcaaatttaattccctaattgtgtagccatggttagaacatcataaaaacattcaccaag 27750747  T
Q  355 aagttttgcagtttttaaacgagagacaaattaattataaattgtttaagtaattcataattatgg 420  Q
    || ||||| |||||||||||||| |||||||||| ||| ||||| ||||| |||||||||||||||    
T  27750746 aaattttgtagtttttaaacgagcgacaaattaa-tattaattg-ttaagaaattcataattatgg 27750683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 298 - 420
Target Start/End: Original strand, 11779160 - 11779282
Alignment:
Q  298 aatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatgaagttttgcagtttttaaacgagagacaaattaattataaatt 397  Q
    |||||||||| | ||| ||||| ||||||||| ||||| |||| |  |||||  || || ||||| |||||||||||||| |||||||||||||| ||||    
T  11779160 aatttcgttcgccaattttataggcatggttaaaacatcataaaagccttcatcataaacttttggagtttttaaacgagcgacaaattaattatgaatt 11779259  T
Q  398 gtttaagtaattcataattatgg 420  Q
    ||||||  |||||||||||||||    
T  11779260 gtttaaaaaattcataattatgg 11779282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 191 - 389
Target Start/End: Complemental strand, 24793096 - 24792894
Alignment:
Q  191 tgcaaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatactca 290  Q
    ||||||||||| ||| |||| || |||  |||| ||||||||||||||  || ||||| |||| ||| ||| ||||||||||| ||||| |||||| ||     
T  24793096 tgcaaagttttgtaggattttaaagacatttcattttatttttatttttcaagaaaaatgtgcgaaa-ttggaattttgttccgagtaaacgtatattcg 24792998  T
Q  291 ctggtcaaatttcgttccctaatcttat-----aagcatggttagaacataataagaatcttcacaatgaagttttgcagtttttaaacgagagacaaat 385  Q
      ||||||||| || || || || ||||     | ||||||||||||||| ||||||| |||||| ||||| ||||| |||||||||||||||  |||||    
T  24792997 tgggtcaaattccgctctcttattttattttataggcatggttagaacattataagaaccttcaccatgaaattttggagtttttaaacgagatgcaaat 24792898  T
Q  386 taat 389  Q
    ||||    
T  24792897 taat 24792894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 255 - 404
Target Start/End: Original strand, 18266162 - 18266315
Alignment:
Q  255 aaaattgaaattttgttcctagtaagcgtatactcactggtcaaatttcgttccctaatcttataagcatggt----tagaacataataagaatcttcac 350  Q
    ||||||| ||||||| ||  ||||||| |||| |||| |||||||||||  |||| ||| || || |||||||    ||||| || ||||||| ||||||    
T  18266162 aaaattgcaattttgctctgagtaagcatatagtcacaggtcaaatttcactcccaaattttgtaggcatggtcgattagaatatcataagaaccttcac 18266261  T
Q  351 aatgaagttttgcagtttttaaacgagagacaaattaattataaattgtttaag 404  Q
     ||| | ||||| |||||||||| |||||||||| ||||||| |||||||||||    
T  18266262 catggaattttgaagtttttaaatgagagacaaactaattatgaattgtttaag 18266315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 276 - 355
Target Start/End: Complemental strand, 28801791 - 28801712
Alignment:
Q  276 gtaagcgtatactcactggtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatga 355  Q
    ||||||||||||||||  ||||||||| |||||||||| || ||||||||  |||||||| ||||||| |||||||||||    
T  28801791 gtaagcgtatactcacaagtcaaatttagttccctaattttgtaagcatgactagaacatgataagaaccttcacaatga 28801712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 231 - 420
Target Start/End: Complemental strand, 8788452 - 8788264
Alignment:
Q  231 tttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatactcactggtcaaatttcgttccctaatcttataagcatggttag 330  Q
    |||||||| |||| |||| |||||||| | | ||||||||| | ||||||||||| ||||   |||||||| | ||| | ||| || || ||||||||||    
T  8788452 tttatttttaaaccaaaatgtgcaaaa-tggcaattttgtttcgagtaagcgtattctcataagtcaaattccattctccaattttgtaggcatggttag 8788354  T
Q  331 aacataataagaatcttcacaatgaagttttgcagtttttaaacgagagacaaattaattataaattgtttaagtaattcataattatgg 420  Q
    ||||| ||||||| |||||| || || ||||  |||| |||||| ||| ||  |||||||   |||| |||||| |||||||||||||||    
T  8788353 aacatcataagaaacttcaccattaaattttcgagttcttaaacaagatacggattaattcctaattatttaagaaattcataattatgg 8788264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 321 - 410
Target Start/End: Complemental strand, 23034351 - 23034262
Alignment:
Q  321 gcatggttagaacataataagaatcttcacaatgaagttttgcagtttttaaacgagagacaaattaattataaattgtttaagtaattc 410  Q
    ||||||||  || |||||||||| ||||| ||| || ||||  ||||||||||  ||||||||||||||||||||||||||||| |||||    
T  23034351 gcatggttgtaatataataagaaccttcaaaattaaattttatagtttttaaataagagacaaattaattataaattgtttaagaaattc 23034262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 323 - 420
Target Start/End: Original strand, 35911354 - 35911451
Alignment:
Q  323 atggttagaacataataagaatcttcacaatgaagttttgcagtttttaaacgagagacaaattaattataaattgtttaagtaattcataattatgg 420  Q
    ||||||||||||| |||| || |||||| ||||| ||||  | |||| ||||||||||  |||||| ||| ||||||||||| |||||||||||||||    
T  35911354 atggttagaacatcataaaaaccttcaccatgaaattttatatttttcaaacgagagatgaattaactatgaattgtttaagaaattcataattatgg 35911451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 325 - 425
Target Start/End: Complemental strand, 35338408 - 35338308
Alignment:
Q  325 ggttagaacataataagaatcttcacaatgaagttttgcagtttttaaacgagagacaaattaattataaattgtttaagtaattcataattatggaaaa 424  Q
    ||||||||||| |||||||  ||||| || || |||||  ||||||||| |||| || |||||||||| |||| |||||  |||||||||||||||||||    
T  35338408 ggttagaacatcataagaacgttcaccataaaattttggggtttttaaatgagatacgaattaattatgaattttttaaaaaattcataattatggaaaa 35338309  T
Q  425 t 425  Q
    |    
T  35338308 t 35338308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 337 - 420
Target Start/End: Complemental strand, 20368573 - 20368490
Alignment:
Q  337 ataagaatcttcacaatgaagttttgcagtttttaaacgagagacaaattaattataaattgtttaagtaattcataattatgg 420  Q
    ||||||| |||||||||||| ||||| ||||||||||||| | ||||||| ||||| |||| |  ||| |||||||||||||||    
T  20368573 ataagaaccttcacaatgaaattttggagtttttaaacgataaacaaatttattatgaattatccaagaaattcataattatgg 20368490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 220 - 338
Target Start/End: Original strand, 30297492 - 30297606
Alignment:
Q  220 ttcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatactcactggtcaaatttcgttccctaatcttata 319  Q
    |||||||||||||| ||||  ||| |||| |||||||| ||||||||||||| ||| ||||||   ||||||  |||||||||  ||||||||| || ||    
T  30297492 ttcaatttatttttgttttccaactaaaacgtgcaaaa-ttgaaattttgtttctattaagcg---actcacatgtcaaattttattccctaattttgta 30297587  T
Q  320 agcatggttagaacataat 338  Q
     ||||||| ||||||||||    
T  30297588 ggcatggtcagaacataat 30297606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 364 - 416
Target Start/End: Complemental strand, 33094407 - 33094355
Alignment:
Q  364 agtttttaaacgagagacaaattaattataaattgtttaagtaattcataatt 416  Q
    ||||||||||||||||| ||||||||||| ||||||||||  |||||||||||    
T  33094407 agtttttaaacgagagaaaaattaattatgaattgtttaataaattcataatt 33094355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 122 - 190
Target Start/End: Original strand, 35362206 - 35362274
Alignment:
Q  122 ataaaggacgaaaacgttacctaaaaataagttatgggaccatttctgtaattttgcctaaaaacaatt 190  Q
    ||||||||||||| |||||||||||| ||||||| ||||| | || ||||||||||||| |||| ||||    
T  35362206 ataaaggacgaaagcgttacctaaaattaagttaagggactaattgtgtaattttgccttaaaagaatt 35362274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 337 - 420
Target Start/End: Complemental strand, 20363211 - 20363128
Alignment:
Q  337 ataagaatcttcacaatgaagttttgcagtttttaaacgagagacaaattaattataaattgtttaagtaattcataattatgg 420  Q
    |||||||  ||||||||||| ||||| ||||||||||||| | ||||||| ||||| |||| |  ||| |||||||||||||||    
T  20363211 ataagaacattcacaatgaaattttggagtttttaaacgataaacaaatttattatgaattatccaagaaattcataattatgg 20363128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 256 - 418
Target Start/End: Original strand, 30922486 - 30922648
Alignment:
Q  256 aaattgaaattttgttcctagtaagcgtatactcactggtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatga 355  Q
    |||||| ||||||||||  | ||||||||||||||| ||||| ||| | ||   |||| || |||||||||||  ||||| |||| || |||||| || |    
T  30922486 aaattgcaattttgttctgactaagcgtatactcacgggtcatattccattttttaattttgtaagcatggtttaaacattataaaaaccttcaccatca 30922585  T
Q  356 agttttgcagtttttaaacgagagacaaattaattataaattgtttaagtaattcataattat 418  Q
    | ||||  | ||||||||||||| |   ||||| ||| ||||||||||  |||||||||||||    
T  30922586 aattttagaatttttaaacgagatatgcattaactatgaattgtttaaaaaattcataattat 30922648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 122 - 179
Target Start/End: Complemental strand, 27843080 - 27843023
Alignment:
Q  122 ataaaggacgaaaacgttacctaaaaataagttatgggaccatttctgtaattttgcc 179  Q
    |||||||||||||| ||||||||||| ||||||| ||||| | || ||||||||||||    
T  27843080 ataaaggacgaaaatgttacctaaaattaagttaagggactaattatgtaattttgcc 27843023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 293 - 414
Target Start/End: Complemental strand, 1050650 - 1050533
Alignment:
Q  293 ggtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatgaagttttgcagtttttaaacgagagacaaattaattat 392  Q
    ||||||||||||||||||||| || |||| || ||||||||   |||||||  ||||| || || ||||  ||||||||||||||    | ||||||| |    
T  1050650 ggtcaaatttcgttccctaattttgtaagaatagttagaactacataagaacattcaccataaaattttagagtttttaaacgag----acattaatttt 1050555  T
Q  393 aaattgtttaagtaattcataa 414  Q
     ||||||||||| |||||||||    
T  1050554 gaattgtttaagaaattcataa 1050533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 122 - 181
Target Start/End: Original strand, 15179078 - 15179137
Alignment:
Q  122 ataaaggacgaaaacgttacctaaaaataagttatgggaccatttctgtaattttgccta 181  Q
    |||||||||||||  ||||||||||| ||||||| ||||| | || ||||||||||||||    
T  15179078 ataaaggacgaaagtgttacctaaaattaagttaagggactaattgtgtaattttgccta 15179137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 365 - 416
Target Start/End: Complemental strand, 22761228 - 22761177
Alignment:
Q  365 gtttttaaacgagagacaaattaattataaattgtttaagtaattcataatt 416  Q
    |||||| || |||||||||||||||| | ||||||||||| |||||||||||    
T  22761228 gtttttgaaagagagacaaattaattctgaattgtttaagaaattcataatt 22761177  T

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Target: chr5; HSP #43
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 122 - 181
Target Start/End: Original strand, 32994443 - 32994502
Alignment:
Q  122 ataaaggacgaaaacgttacctaaaaataagttatgggaccatttctgtaattttgccta 181  Q
    |||||||||||||  ||||||||||| ||||||| ||||| | || ||||||||||||||    
T  32994443 ataaaggacgaaagtgttacctaaaattaagttaagggactaattgtgtaattttgccta 32994502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 122 - 180
Target Start/End: Original strand, 32458075 - 32458133
Alignment:
Q  122 ataaaggacgaaaacgttacctaaaaataagttatgggaccatttctgtaattttgcct 180  Q
    |||||||| ||||| ||||||||||| ||||||| ||||| | || |||||||||||||    
T  32458075 ataaaggatgaaaatgttacctaaaattaagttaagggactaattgtgtaattttgcct 32458133  T

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Target: chr5; HSP #45
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 122 - 184
Target Start/End: Original strand, 35363278 - 35363340
Alignment:
Q  122 ataaaggacgaaaacgttacctaaaaataagttatgggaccatttctgtaattttgcctaaaa 184  Q
    |||||||||||||  |||||||||||  |||||| ||||| | || |||||||||||||||||    
T  35363278 ataaaggacgaaagtgttacctaaaataaagttaagggactaattgtgtaattttgcctaaaa 35363340  T

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Target: chr5; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 122 - 179
Target Start/End: Original strand, 19558161 - 19558218
Alignment:
Q  122 ataaaggacgaaaacgttacctaaaaataagttatgggaccatttctgtaattttgcc 179  Q
    |||||||||||||  ||||||||||| ||||||| ||||| | || ||||||||||||    
T  19558161 ataaaggacgaaagtgttacctaaaattaagttaagggactaattgtgtaattttgcc 19558218  T

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Target: scaffold0041 (Bit Score: 90; Significance: 3e-43; HSPs: 1)
Name: scaffold0041
Description:

Target: scaffold0041; HSP #1
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 194 - 419
Target Start/End: Complemental strand, 53578 - 53354
Alignment:
Q  194 aaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatactcactg 293  Q
    ||||||| |||||||||| | | || || |||||||| | |||||  ||| |||| |||||||| |||||||||||||||  ||||| ||||||||||      
T  53578 aaagtttcatagcatttcgaagtcgtttaaatttattatgatttttcaaccaaaacgtgcaaaa-ttgaaattttgttccgcgtaagtgtatactcacaa 53480  T
Q  294 gtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatgaagttttgcagtttttaaacgagagacaaattaattata 393  Q
    ||||||||| |||||||||| || || |||||  |||| ||| ||||||| ||||||| |||| ||||| ||| ||||||||||| ||||||||||||||    
T  53479 gtcaaatttagttccctaattttgtaggcatgactagagcatgataagaaccttcacagtgaaattttgtagtctttaaacgagatacaaattaattata 53380  T
Q  394 aattgtttaagtaattcataattatg 419  Q
    ||||||||||| ||||||||||||||    
T  53379 aattgtttaagaaattcataattatg 53354  T

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Target: scaffold0002 (Bit Score: 89; Significance: 1e-42; HSPs: 2)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 188 - 419
Target Start/End: Original strand, 479944 - 480175
Alignment:
Q  188 atttgcaaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatac 287  Q
    ||||| ||||||| |||||||||| |   || || |||||||||| |||||  |||  ||| |||||||| |||||||||||||||  ||||||||||||    
T  479944 atttgtaaagtttcatagcatttcgaaatcgtttaaatttattttgatttttcaactgaaacgtgcaaaa-ttgaaattttgttccgcgtaagcgtatac 480042  T
Q  288 tcactggtcaaatttcgttccctaatcttataagcatggttagaacataataagaatc-ttcacaatgaagttttgcagtttttaaacgagagacaaatt 386  Q
    ||||  ||||||||| |||||||||| || || |||||  |||||||| ||||||| | ||||||||||| ||||| |  |||||||||||| |||||||    
T  480043 tcacaagtcaaatttagttccctaattttgtaggcatgactagaacatgataagaaacattcacaatgaaattttgtaaattttaaacgagatacaaatt 480142  T
Q  387 aattataaattgtttaagtaattcataattatg 419  Q
    |||||||||||||||||| ||||||||||||||    
T  480143 aattataaattgtttaagaaattcataattatg 480175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002; HSP #2
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 122 - 182
Target Start/End: Complemental strand, 330254 - 330194
Alignment:
Q  122 ataaaggacgaaaacgttacctaaaaataagttatgggaccatttctgtaattttgcctaa 182  Q
    |||||||||||||| |||||||||||  |||||| ||||| | || |||||||||||||||    
T  330254 ataaaggacgaaaatgttacctaaaataaagttaagggactaattgtgtaattttgcctaa 330194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0134 (Bit Score: 84; Significance: 1e-39; HSPs: 1)
Name: scaffold0134
Description:

Target: scaffold0134; HSP #1
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 193 - 420
Target Start/End: Complemental strand, 17978 - 17754
Alignment:
Q  193 caaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatactcact 292  Q
    |||||||| ||| |||||| | |||| | |||||| ||||||||||  ||| ||| | ||||||| |||||||||||||||||||||  ||||||| |      
T  17978 caaagtttcatatcatttcgaagacgttgcaatttgtttttatttttcaaccaaacg-tgcaaaa-ttgaaattttgttcctagtaattgtatactaata 17881  T
Q  293 ggtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatgaagttttgcagtttttaaacgagagacaaattaattat 392  Q
    | |||||| ||||||| |||| || || ||||||||||||||||||| ||| |||||||||||| |||||| ||||||||| ||||||||||||| ||||    
T  17880 gatcaaatgtcgttccttaattttgtaggcatggttagaacataatatgaaccttcacaatgaaattttgctgtttttaaa-gagagacaaattacttat 17782  T
Q  393 aaattgtttaagtaattcataattatgg 420  Q
    |||||||| ||| |||||||| ||||||    
T  17781 aaattgttaaagaaattcatacttatgg 17754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0069 (Bit Score: 84; Significance: 1e-39; HSPs: 1)
Name: scaffold0069
Description:

Target: scaffold0069; HSP #1
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 188 - 414
Target Start/End: Complemental strand, 18238 - 18012
Alignment:
Q  188 atttgcaaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatac 287  Q
    ||||| ||||||| |||||||||| | | || || |||||||||| |||||  |||  ||| |||||||| |||||||||||||||  ||||||||||||    
T  18238 atttgtaaagtttcatagcatttcgaagtcgtttaaatttattttgatttttcaactgaaacgtgcaaaa-ttgaaattttgttccgcgtaagcgtatac 18140  T
Q  288 tcactggtcaaatttcgttccctaatcttataagcatggttagaacataataag-aatcttcacaatgaagttttgcagtttttaaacgagagacaaatt 386  Q
    ||||  ||||||||| |||||||||| || ||||||||  |||||||| ||||| || |||||||||||| ||||| |  |||||||||| | |||||||    
T  18139 tcacaagtcaaatttagttccctaattttgtaagcatgactagaacatgataagaaaccttcacaatgaaattttgtaaattttaaacgatatacaaatt 18040  T
Q  387 aattataaattgtttaagtaattcataa 414  Q
    ||||||||||||||||||  ||||||||    
T  18039 aattataaattgtttaagacattcataa 18012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0495 (Bit Score: 66; Significance: 6e-29; HSPs: 1)
Name: scaffold0495
Description:

Target: scaffold0495; HSP #1
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 191 - 420
Target Start/End: Complemental strand, 8695 - 8467
Alignment:
Q  191 tgcaaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatactca 290  Q
    |||||| ||| |||| ||||||| || | ||| |||| ||||||||||  ||| |||| |||  ||| ||| ||||||||||  ||||| | |||| |||    
T  8695 tgcaaaatttcatagtatttcaaagatgtttcgatttctttttatttttcaaccaaaacgtgtgaaa-ttgcaattttgttctgagtaaacatatattca 8597  T
Q  291 ctggtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatgaagttttgcagtttttaaacgagagacaaattaatt 390  Q
    |  |||||||||||||  ||||| || || ||||||||||||||  ||||||| |||||| ||||| ||||| || ||||||| |||| || ||||||||    
T  8596 cgagtcaaatttcgttttctaattttctaggcatggttagaacaacataagaaccttcaccatgaaattttgaagattttaaatgagatacgaattaatt 8497  T
Q  391 ataaattgtttaagtaattcataattatgg 420  Q
    || ||||||||||| |||||||||||||||    
T  8496 attaattgtttaagaaattcataattatgg 8467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0166 (Bit Score: 48; Significance: 3e-18; HSPs: 1)
Name: scaffold0166
Description:

Target: scaffold0166; HSP #1
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 191 - 389
Target Start/End: Complemental strand, 35479 - 35277
Alignment:
Q  191 tgcaaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatactca 290  Q
    ||||||||||| ||| |||| || |||  |||| ||||||||||||||  || ||||| |||| ||| ||| ||||||||||| ||||| |||||| ||     
T  35479 tgcaaagttttgtaggattttaaagacatttcattttatttttatttttcaagaaaaatgtgcgaaa-ttggaattttgttccgagtaaacgtatattcg 35381  T
Q  291 ctggtcaaatttcgttccctaatcttat-----aagcatggttagaacataataagaatcttcacaatgaagttttgcagtttttaaacgagagacaaat 385  Q
      ||||||||| || || || || ||||     | ||||||||||||||| ||||||| |||||| ||||| ||||| |||||||||||||||  |||||    
T  35380 tgggtcaaattccgctctcttattttattttataggcatggttagaacattataagaaccttcaccatgaaattttggagtttttaaacgagatgcaaat 35281  T
Q  386 taat 389  Q
    ||||    
T  35280 taat 35277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0831 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0831
Description:

Target: scaffold0831; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 221 - 361
Target Start/End: Complemental strand, 3521 - 3383
Alignment:
Q  221 tcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatactcactggtcaaatttcgttccctaatcttataa 320  Q
    ||||||| ||||||||||  |||||||| |||||||| ||| ||||||||||| | ||| | ||||||||| | |||||| | |||||| ||| || ||     
T  3521 tcaatttgtttttatttttcaacaaaaatgtgcaaaa-ttgcaattttgttccgactaaccatatactcacggatcaaatgttgttccccaattttgtag 3423  T
Q  321 gcatggttagaacataataagaatcttcacaatgaagtttt 361  Q
    |||||||||||| ||  ||||||| ||||| ||||| ||||    
T  3422 gcatggttagaatat-gtaagaattttcaccatgaattttt 3383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0311 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0311
Description:

Target: scaffold0311; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 122 - 182
Target Start/End: Original strand, 12885 - 12945
Alignment:
Q  122 ataaaggacgaaaacgttacctaaaaataagttatgggaccatttctgtaattttgcctaa 182  Q
    |||||||||||||| |||| |||||| ||||||| ||||| | || |||||||||||||||    
T  12885 ataaaggacgaaaatgttatctaaaattaagttaagggactaattgtgtaattttgcctaa 12945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 122 - 182
Target Start/End: Complemental strand, 136973 - 136913
Alignment:
Q  122 ataaaggacgaaaacgttacctaaaaataagttatgggaccatttctgtaattttgcctaa 182  Q
    |||||||||||||| |||||||||||  |||||| ||||| | || |||||||||||||||    
T  136973 ataaaggacgaaaatgttacctaaaataaagttaagggactaattgtgtaattttgcctaa 136913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0347 (Bit Score: 30; Significance: 0.0000002; HSPs: 2)
Name: scaffold0347
Description:

Target: scaffold0347; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 118 - 179
Target Start/End: Complemental strand, 12001 - 11940
Alignment:
Q  118 aaaaataaaggacgaaaacgttacctaaaaataagttatgggaccatttctgtaattttgcc 179  Q
    ||||| |||| ||||||| ||||||||||| ||||||| ||||| | || ||||||||||||    
T  12001 aaaaaaaaagaacgaaaatgttacctaaaattaagttaagggactaattgtgtaattttgcc 11940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0347; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 123 - 180
Target Start/End: Original strand, 12223 - 12280
Alignment:
Q  123 taaaggacgaaaacgttacctaaaaataagttatgggaccatttctgtaattttgcct 180  Q
    ||||||||||||  ||||||||||| ||||||| ||||| | || |||||||||||||    
T  12223 taaaggacgaaagtgttacctaaaattaagttaagggactaattgtgtaattttgcct 12280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 383 - 419
Target Start/End: Original strand, 2139 - 2175
Alignment:
Q  383 aattaattataaattgtttaagtaattcataattatg 419  Q
    |||||||||| ||||||||||| ||||||||||||||    
T  2139 aattaattatgaattgtttaagaaattcataattatg 2175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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