View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

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 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF15969_high_6 (Length: 304)

Name: NF15969_high_6
Description: NF15969
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF15969_high_6
NF15969_high_6
[»] chr7 (1 HSPs)
chr7 (1-290)||(38632805-38633094)


Alignment Details
Target: chr7 (Bit Score: 290; Significance: 1e-163; HSPs: 1)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 290; E-Value: 1e-163
Query Start/End: Original strand, 1 - 290
Target Start/End: Complemental strand, 38633094 - 38632805
Alignment:
Q  1 ggtacttttcagtttatgttctgttactcattttctggttcctttgattttgtttcccactgtactttactttgtaagcaccaggttgccccattttatc 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38633094 ggtacttttcagtttatgttctgttactcattttctggttcctttgattttgtttcccactgtactttactttgtaagcaccaggttgccccattttatc 38632995  T
Q  101 acttttattggtttcttcagcttctcccttatttatttcaacattgttctttttccatttccttgaatcttacatcataagtctatggaagataccttag 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38632994 acttttattggtttcttcagcttctcccttatttatttcaacattgttctttttccatttccttgaatcttacatcataagtctatggaagataccttag 38632895  T
Q  201 ggtttttctcatgttcatgattatgacagccaatatttcaacaaactaaagaggagaacagaatgactaaaaaacctgtggtacttgttc 290  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38632894 ggtttttctcatgttcatgattatgacagccaatatttcaacaaactaaagaggagaacagaatgactaaaaaacctgtggtacttgttc 38632805  T

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