View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1596_high_112 (Length: 238)

Name: NF1596_high_112
Description: NF1596
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1596_high_112
NF1596_high_112
[»] chr7 (56 HSPs)
chr7 (1-105)||(40946254-40946358)
chr7 (1-105)||(48457579-48457683)
chr7 (9-74)||(7094689-7094754)
chr7 (9-76)||(7092442-7092509)
chr7 (1-76)||(7470281-7470356)
chr7 (1-83)||(3035669-3035751)
chr7 (1-83)||(38393934-38394016)
chr7 (9-76)||(7472247-7472314)
chr7 (29-83)||(1849917-1849971)
chr7 (1-83)||(44516-44594)
chr7 (1-74)||(20625995-20626068)
chr7 (1-74)||(20629886-20629959)
chr7 (1-74)||(20642305-20642378)
chr7 (13-83)||(11757176-11757246)
chr7 (13-83)||(20299406-20299476)
chr7 (1-83)||(28485514-28485596)
chr7 (108-185)||(40945828-40945908)
chr7 (1-83)||(27306488-27306566)
chr7 (1-82)||(1049554-1049631)
chr7 (3-75)||(28487509-28487581)
chr7 (11-83)||(35581-35649)
chr7 (4-70)||(3878540-3878604)
chr7 (1-83)||(18345489-18345571)
chr7 (9-83)||(20297310-20297384)
chr7 (1-83)||(7349532-7349616)
chr7 (1-83)||(7351911-7351995)
chr7 (9-81)||(9680768-9680841)
chr7 (9-83)||(22392425-22392495)
chr7 (1-83)||(31156170-31156248)
chr7 (14-76)||(9679013-9679076)
chr7 (3-82)||(25542484-25542558)
chr7 (36-82)||(22108114-22108160)
chr7 (36-82)||(22137125-22137171)
chr7 (36-82)||(40549874-40549920)
chr7 (36-82)||(40552152-40552198)
chr7 (38-83)||(1606422-1606467)
chr7 (1-83)||(18567565-18567643)
chr7 (1-83)||(31435306-31435384)
chr7 (9-83)||(7188495-7188565)
chr7 (65-105)||(7464829-7464870)
chr7 (37-82)||(9027395-9027440)
chr7 (65-105)||(25351184-25351225)
chr7 (65-105)||(25356878-25356919)
chr7 (65-105)||(25409961-25410002)
chr7 (65-105)||(30246800-30246841)
chr7 (65-105)||(34547174-34547215)
chr7 (9-83)||(42331266-42331336)
chr7 (65-105)||(44512836-44512877)
chr7 (34-82)||(2935306-2935354)
chr7 (1-37)||(11355252-11355288)
chr7 (1-37)||(20137368-20137404)
chr7 (1-37)||(21678060-21678096)
chr7 (1-37)||(21680021-21680057)
chr7 (1-37)||(24258457-24258493)
chr7 (1-37)||(26804563-26804599)
chr7 (1-41)||(38396306-38396346)
[»] chr5 (41 HSPs)
chr5 (1-105)||(4409977-4410081)
chr5 (1-105)||(39854404-39854503)
chr5 (9-105)||(6747224-6747318)
chr5 (1-102)||(10529358-10529455)
chr5 (1-83)||(18468949-18469031)
chr5 (46-105)||(6744981-6745040)
chr5 (1-76)||(18466629-18466704)
chr5 (1-89)||(1189868-1189957)
chr5 (1-82)||(31542678-31542755)
chr5 (4-83)||(25921735-25921810)
chr5 (1-82)||(31545023-31545100)
chr5 (3-83)||(2818597-2818673)
chr5 (1-82)||(38882048-38882126)
chr5 (9-83)||(10586781-10586854)
chr5 (1-83)||(20507721-20507799)
chr5 (1-83)||(27912472-27912556)
chr5 (1-41)||(21684710-21684750)
chr5 (1-82)||(31179630-31179707)
chr5 (1-83)||(16776099-16776178)
chr5 (9-74)||(18511479-18511542)
chr5 (36-82)||(23665081-23665127)
chr5 (36-82)||(23667356-23667402)
chr5 (36-82)||(23742055-23742101)
chr5 (36-82)||(23793460-23793506)
chr5 (38-83)||(3373333-3373378)
chr5 (1-83)||(4236571-4236649)
chr5 (9-83)||(12556190-12556260)
chr5 (1-83)||(27910387-27910470)
chr5 (34-82)||(15354770-15354818)
chr5 (34-82)||(15357046-15357094)
chr5 (1-41)||(34477313-34477353)
chr5 (1-41)||(34479678-34479718)
chr5 (65-105)||(40222594-40222634)
chr5 (1-81)||(2174863-2174939)
chr5 (1-81)||(20042994-20043070)
chr5 (9-81)||(20044954-20045022)
chr5 (4-83)||(21947969-21948043)
chr5 (9-76)||(18509585-18509649)
chr5 (65-105)||(35385763-35385804)
chr5 (9-83)||(36402595-36402665)
chr5 (37-82)||(38960333-38960378)
[»] chr2 (30 HSPs)
chr2 (1-105)||(5377688-5377792)
chr2 (9-105)||(45280252-45280344)
chr2 (1-83)||(23452496-23452578)
chr2 (1-82)||(24162471-24162548)
chr2 (1-83)||(40032317-40032395)
chr2 (1-82)||(13910303-13910380)
chr2 (1-82)||(19504604-19504681)
chr2 (1-83)||(42064433-42064511)
chr2 (1-82)||(27104718-27104795)
chr2 (1-83)||(21520952-21521032)
chr2 (9-83)||(42923776-42923848)
chr2 (1-83)||(22287595-22287673)
chr2 (1-83)||(42452701-42452779)
chr2 (1-81)||(19007560-19007636)
chr2 (1-76)||(6264404-6264475)
chr2 (29-95)||(20589567-20589633)
chr2 (65-105)||(12781531-12781572)
chr2 (65-105)||(17943368-17943409)
chr2 (65-105)||(20050333-20050374)
chr2 (65-105)||(20055076-20055117)
chr2 (65-105)||(22712827-22712868)
chr2 (65-105)||(27517952-27517993)
chr2 (9-83)||(35215853-35215933)
chr2 (65-105)||(35894572-35894613)
chr2 (37-82)||(36559066-36559111)
chr2 (37-82)||(36561343-36561388)
chr2 (1-38)||(38020161-38020198)
chr2 (37-82)||(45332383-45332428)
chr2 (1-37)||(31733024-31733060)
chr2 (9-41)||(35218230-35218262)
[»] chr4 (52 HSPs)
chr4 (1-105)||(8631678-8631782)
chr4 (1-105)||(40637048-40637148)
chr4 (1-105)||(6764813-6764913)
chr4 (1-83)||(17662493-17662575)
chr4 (1-105)||(47868375-47868475)
chr4 (1-96)||(2485131-2485223)
chr4 (1-83)||(5637724-5637806)
chr4 (1-83)||(38409195-38409279)
chr4 (1-83)||(24348210-24348292)
chr4 (1-95)||(14633304-14633393)
chr4 (1-83)||(5198416-5198494)
chr4 (1-83)||(24888792-24888870)
chr4 (1-83)||(9148247-9148327)
chr4 (9-83)||(14787698-14787770)
chr4 (1-83)||(53405123-53405204)
chr4 (1-83)||(47210999-47211083)
chr4 (1-82)||(11434952-11435029)
chr4 (1-83)||(36919844-36919924)
chr4 (4-83)||(619709-619784)
chr4 (1-82)||(7941316-7941395)
chr4 (4-83)||(40091677-40091752)
chr4 (1-83)||(22044649-22044727)
chr4 (9-83)||(22801129-22801199)
chr4 (9-83)||(22803001-22803071)
chr4 (9-82)||(37089638-37089710)
chr4 (9-83)||(44600105-44600175)
chr4 (1-83)||(47274723-47274801)
chr4 (9-83)||(48486315-48486385)
chr4 (1-83)||(51015242-51015320)
chr4 (9-82)||(9174413-9174482)
chr4 (9-82)||(16934410-16934479)
chr4 (1-82)||(18847150-18847227)
chr4 (14-76)||(13543957-13544020)
chr4 (1-83)||(22132649-22132736)
chr4 (9-76)||(9176741-9176804)
chr4 (1-39)||(16453345-16453383)
chr4 (1-82)||(11006496-11006577)
chr4 (1-83)||(18709422-18709508)
chr4 (1-83)||(22046944-22047022)
chr4 (1-41)||(11008825-11008865)
chr4 (9-82)||(16932056-16932125)
chr4 (9-83)||(25357633-25357709)
chr4 (55-105)||(15312152-15312203)
chr4 (1-83)||(36921753-36921832)
chr4 (1-84)||(36378287-36378366)
chr4 (65-105)||(4556370-4556411)
chr4 (65-105)||(15830971-15831012)
chr4 (65-105)||(18586796-18586837)
chr4 (65-105)||(31300254-31300295)
chr4 (1-37)||(24446838-24446874)
chr4 (1-37)||(31849858-31849894)
chr4 (1-37)||(37313325-37313361)
[»] chr3 (55 HSPs)
chr3 (1-105)||(4308538-4308638)
chr3 (1-105)||(51727263-51727363)
chr3 (1-103)||(27101438-27101540)
chr3 (1-105)||(35918206-35918306)
chr3 (1-105)||(43225986-43226086)
chr3 (1-105)||(43228191-43228291)
chr3 (29-105)||(29956564-29956640)
chr3 (29-105)||(30005719-30005795)
chr3 (1-105)||(9604864-9604969)
chr3 (1-82)||(38889962-38890040)
chr3 (43-105)||(25690651-25690713)
chr3 (28-105)||(27101540-27101617)
chr3 (1-81)||(10084646-10084726)
chr3 (1-83)||(4104152-4104234)
chr3 (1-82)||(6063703-6063782)
chr3 (1-83)||(10191566-10191648)
chr3 (1-83)||(42992204-42992286)
chr3 (1-83)||(455825-455907)
chr3 (1-83)||(458202-458284)
chr3 (1-82)||(11170327-11170404)
chr3 (9-82)||(50493922-50493991)
chr3 (1-82)||(6066053-6066131)
chr3 (1-83)||(1321363-1321441)
chr3 (1-83)||(45882861-45882939)
chr3 (1-82)||(3859451-3859528)
chr3 (1-82)||(5522872-5522949)
chr3 (1-82)||(11163073-11163150)
chr3 (9-82)||(18097165-18097235)
chr3 (4-83)||(24979629-24979704)
chr3 (9-83)||(746673-746749)
chr3 (29-82)||(6719392-6719445)
chr3 (1-83)||(25533356-25533442)
chr3 (1-83)||(26720470-26720548)
chr3 (1-89)||(47149152-47149241)
chr3 (9-83)||(1618920-1618993)
chr3 (1-82)||(5191576-5191653)
chr3 (1-82)||(22114562-22114639)
chr3 (9-82)||(35777344-35777413)
chr3 (38-82)||(53896486-53896530)
chr3 (1-80)||(6561735-6561810)
chr3 (9-83)||(15780782-15780852)
chr3 (38-83)||(48361960-48362005)
chr3 (1-41)||(42990264-42990304)
chr3 (9-70)||(18099435-18099493)
chr3 (9-44)||(38210327-38210362)
chr3 (65-105)||(5858376-5858417)
chr3 (65-105)||(10595342-10595383)
chr3 (1-83)||(32219017-32219095)
chr3 (34-83)||(42990204-42990253)
chr3 (65-105)||(47878482-47878523)
chr3 (65-105)||(54188338-54188379)
chr3 (1-37)||(1626940-1626976)
chr3 (1-37)||(28102259-28102295)
chr3 (1-37)||(28137552-28137588)
chr3 (1-37)||(43423720-43423756)
[»] chr6 (33 HSPs)
chr6 (1-105)||(1230508-1230608)
chr6 (1-105)||(28241580-28241681)
chr6 (9-105)||(26064936-26065033)
chr6 (9-105)||(26084905-26085002)
chr6 (1-80)||(19704828-19704909)
chr6 (34-83)||(26932858-26932907)
chr6 (35-83)||(18318003-18318051)
chr6 (1-83)||(2629144-2629227)
chr6 (9-83)||(12195782-12195852)
chr6 (4-83)||(30967175-30967253)
chr6 (1-82)||(20915615-20915694)
chr6 (1-83)||(30034862-30034944)
chr6 (1-83)||(14507434-14507512)
chr6 (1-74)||(14459024-14459093)
chr6 (1-82)||(15541399-15541476)
chr6 (3-83)||(15532942-15533018)
chr6 (1-75)||(32279982-32280051)
chr6 (1-83)||(8995456-8995534)
chr6 (1-83)||(9019903-9019981)
chr6 (29-82)||(29754979-29755032)
chr6 (1-41)||(4816490-4816530)
chr6 (1-82)||(11983288-11983365)
chr6 (1-82)||(19227667-19227744)
chr6 (38-82)||(26066320-26066364)
chr6 (38-82)||(26068591-26068635)
chr6 (1-83)||(1072136-1072214)
chr6 (65-105)||(17695162-17695203)
chr6 (65-105)||(25466210-25466251)
chr6 (65-105)||(25941475-25941516)
chr6 (1-37)||(13057213-13057249)
chr6 (1-37)||(24338707-24338743)
chr6 (1-37)||(25477293-25477329)
chr6 (1-37)||(32447575-32447611)
[»] scaffold0038 (1 HSPs)
scaffold0038 (1-105)||(41742-41843)
[»] chr8 (34 HSPs)
chr8 (29-105)||(22684949-22685025)
chr8 (9-83)||(43530122-43530196)
chr8 (1-83)||(32339303-32339385)
chr8 (1-83)||(15809213-15809295)
chr8 (1-83)||(14807749-14807827)
chr8 (1-83)||(12517283-12517363)
chr8 (9-80)||(608727-608802)
chr8 (1-83)||(3886177-3886255)
chr8 (1-83)||(24873440-24873524)
chr8 (1-82)||(44720842-44720919)
chr8 (4-83)||(3874004-3874083)
chr8 (1-83)||(4424016-4424094)
chr8 (1-83)||(15072708-15072786)
chr8 (1-83)||(27826984-27827062)
chr8 (1-83)||(27829295-27829373)
chr8 (9-83)||(28283486-28283562)
chr8 (65-105)||(9021418-9021458)
chr8 (1-82)||(18810707-18810784)
chr8 (1-84)||(26775198-26775277)
chr8 (38-83)||(28251859-28251904)
chr8 (1-82)||(18812892-18812969)
chr8 (38-83)||(2468390-2468435)
chr8 (1-83)||(13858743-13858821)
chr8 (1-83)||(14419450-14419528)
chr8 (65-105)||(21033700-21033741)
chr8 (65-105)||(29555096-29555137)
chr8 (38-83)||(31162211-31162256)
chr8 (1-37)||(5622997-5623033)
chr8 (1-37)||(25952561-25952597)
chr8 (1-37)||(27107156-27107192)
chr8 (1-37)||(33541647-33541683)
chr8 (1-37)||(35872637-35872673)
chr8 (1-37)||(37214469-37214505)
chr8 (9-41)||(43082009-43082041)
[»] scaffold0511 (1 HSPs)
scaffold0511 (1-83)||(1987-2071)
[»] scaffold0552 (1 HSPs)
scaffold0552 (1-105)||(1090-1190)
[»] chr1 (45 HSPs)
chr1 (9-82)||(47177301-47177374)
chr1 (9-82)||(47179652-47179725)
chr1 (1-76)||(21948448-21948523)
chr1 (4-105)||(2617438-2617533)
chr1 (1-83)||(2510585-2510667)
chr1 (9-89)||(12302774-12302855)
chr1 (1-83)||(28842435-28842515)
chr1 (1-83)||(27337199-27337281)
chr1 (3-83)||(28840620-28840698)
chr1 (57-105)||(13449861-13449909)
chr1 (11-83)||(24325598-24325674)
chr1 (1-83)||(27339391-27339473)
chr1 (1-83)||(9463505-9463589)
chr1 (1-74)||(20302410-20302479)
chr1 (1-82)||(51749982-51750059)
chr1 (4-83)||(9459681-9459762)
chr1 (1-83)||(31735782-31735864)
chr1 (1-83)||(13215023-13215101)
chr1 (1-83)||(14098231-14098309)
chr1 (1-83)||(15823488-15823566)
chr1 (12-82)||(16231544-16231610)
chr1 (1-83)||(41646862-41646940)
chr1 (9-83)||(47906206-47906282)
chr1 (1-82)||(6822958-6823035)
chr1 (1-82)||(13761780-13761857)
chr1 (1-76)||(39932020-39932093)
chr1 (1-82)||(6823827-6823905)
chr1 (29-76)||(15295133-15295180)
chr1 (67-105)||(9521546-9521584)
chr1 (4-83)||(28207330-28207405)
chr1 (3-82)||(51752308-51752383)
chr1 (9-75)||(10400097-10400159)
chr1 (1-83)||(38925739-38925817)
chr1 (38-83)||(39462461-39462506)
chr1 (9-82)||(16226110-16226179)
chr1 (10-83)||(47451590-47451659)
chr1 (65-105)||(9526296-9526337)
chr1 (9-83)||(49495468-49495538)
chr1 (1-37)||(17318877-17318913)
chr1 (1-37)||(18307093-18307129)
chr1 (1-82)||(20291400-20291477)
chr1 (1-41)||(25127852-25127892)
chr1 (1-37)||(25248775-25248811)
chr1 (1-37)||(31423135-31423171)
chr1 (57-105)||(43104080-43104127)
[»] scaffold0025 (2 HSPs)
scaffold0025 (1-83)||(69550-69632)
scaffold0025 (1-83)||(73282-73364)
[»] scaffold0005 (2 HSPs)
scaffold0005 (1-95)||(183899-183988)
scaffold0005 (9-83)||(51960-52032)
[»] scaffold0472 (1 HSPs)
scaffold0472 (9-82)||(6151-6220)
[»] scaffold0250 (1 HSPs)
scaffold0250 (1-82)||(2832-2909)
[»] scaffold0339 (1 HSPs)
scaffold0339 (1-83)||(3948-4026)
[»] scaffold0131 (2 HSPs)
scaffold0131 (1-83)||(14970-15048)
scaffold0131 (4-69)||(14644-14707)
[»] scaffold0068 (1 HSPs)
scaffold0068 (1-41)||(29160-29200)
[»] scaffold0140 (2 HSPs)
scaffold0140 (36-82)||(22162-22208)
scaffold0140 (36-82)||(24437-24483)
[»] scaffold0209 (1 HSPs)
scaffold0209 (65-105)||(17297-17338)
[»] scaffold0004 (1 HSPs)
scaffold0004 (65-105)||(188553-188594)
[»] scaffold0267 (1 HSPs)
scaffold0267 (9-41)||(30-62)


Alignment Details
Target: chr7 (Bit Score: 93; Significance: 2e-45; HSPs: 56)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 1 - 105
Target Start/End: Complemental strand, 40946358 - 40946254
Alignment:
Q  1 tgcctttttaaacccttgtttcagccccctctgtctctctcaaagtttgctatgaaacaaggtctatatttatagtgaaagtaatcccttaaaaaactga 100  Q
    ||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  40946358 tgcctttctaaacccttgtttcagccccctctgtccctctcaaagtttgctatgaaacaaggtttatatttatagtgaaagtaatcccttaaaaaactga 40946259  T
Q  101 aacaa 105  Q
    |||||    
T  40946258 aacaa 40946254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 1 - 105
Target Start/End: Complemental strand, 48457683 - 48457579
Alignment:
Q  1 tgcctttttaaacccttgtttcagccccctctgtctctctcaaagtttgctatgaaacaaggtctatatttatagtgaaagtaatcccttaaaaaactga 100  Q
    ||||||| |||||||||||||||||||||||| |||||||||||||||    ||| ||||||||||||||||||||||||||||||||||||||||||||    
T  48457683 tgcctttctaaacccttgtttcagccccctctatctctctcaaagtttagcctgatacaaggtctatatttatagtgaaagtaatcccttaaaaaactga 48457584  T
Q  101 aacaa 105  Q
    |||||    
T  48457583 aacaa 48457579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 9 - 74
Target Start/End: Original strand, 7094689 - 7094754
Alignment:
Q  9 taaacccttgtttcagccccctctgtctctctcaaagtttgctatgaaacaaggtctatatttata 74  Q
    |||||||||||||||||||||||| |||||||||||||||||| ||| ||||||||||||||||||    
T  7094689 taaacccttgtttcagccccctctatctctctcaaagtttgctctgatacaaggtctatatttata 7094754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 9 - 76
Target Start/End: Original strand, 7092442 - 7092509
Alignment:
Q  9 taaacccttgtttcagccccctctgtctctctcaaagtttgctatgaaacaaggtctatatttatagt 76  Q
    |||||||||||||||||||||||  |||||||||||||||||| ||| ||||||||||||||||||||    
T  7092442 taaacccttgtttcagccccctccatctctctcaaagtttgctctgatacaaggtctatatttatagt 7092509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 7470281 - 7470356
Alignment:
Q  1 tgcctttttaaacccttgtttcagccccctctgtctctctcaaagtttgctatgaaacaaggtctatatttatagt 76  Q
    ||||||| |||||||||||||||||||||||| |||||||||||||||  | ||| ||||||||||||||||||||    
T  7470281 tgcctttctaaacccttgtttcagccccctctatctctctcaaagtttagtctgatacaaggtctatatttatagt 7470356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 3035751 - 3035669
Alignment:
Q  1 tgcctttttaaacccttgtttcagccccctctgtctctctcaaagtttgctatgaaacaaggtctatatttatagtgaaagta 83  Q
    ||||||| |||||||||||||||||||||||| |||||||||||||||    ||| |||||||||||||||||||| ||||||    
T  3035751 tgcctttctaaacccttgtttcagccccctctatctctctcaaagtttagcctgatacaaggtctatatttatagtaaaagta 3035669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 38394016 - 38393934
Alignment:
Q  1 tgcctttttaaacccttgtttcagccccctctgtctctctcaaagtttgctatgaaacaaggtctatatttatagtgaaagta 83  Q
    ||||||| |||||||||||||||||||||||| |||||||||||||||    ||| |||||||||||||||||||| ||||||    
T  38394016 tgcctttctaaacccttgtttcagccccctctatctctctcaaagtttagcctgatacaaggtctatatttatagtaaaagta 38393934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 9 - 76
Target Start/End: Original strand, 7472247 - 7472314
Alignment:
Q  9 taaacccttgtttcagccccctctgtctctctcaaagtttgctatgaaacaaggtctatatttatagt 76  Q
    |||||||||||||||||||||||| |||||||||||||||  | ||| ||||||||||||||||||||    
T  7472247 taaacccttgtttcagccccctctatctctctcaaagtttagtctgatacaaggtctatatttatagt 7472314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 29 - 83
Target Start/End: Complemental strand, 1849971 - 1849917
Alignment:
Q  29 ctctgtctctctcaaagtttgctatgaaacaaggtctatatttatagtgaaagta 83  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  1849971 ctctctctctctcaaagtttgctatgaaacaaggtctatatttatagtaaaagta 1849917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 44594 - 44516
Alignment:
Q  1 tgcctttttaaacccttgtttcagccccctctgtctctctcaaagtttgctatgaaacaaggtctatatttatagtgaaagta 83  Q
    ||||||| |||||||||||||||||||||||| ||||    |||||||||| ||| |||||||||||||||||||| ||||||    
T  44594 tgcctttctaaacccttgtttcagccccctctatctc----aaagtttgctctgatacaaggtctatatttatagtaaaagta 44516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 20626068 - 20625995
Alignment:
Q  1 tgcctttttaaacccttgtttcagccccctctgtctctctcaaagtttgctatgaaacaaggtctatatttata 74  Q
    ||||||| |||||||||||||||||||||||| |||||||||||||||  | ||| | ||||||||||||||||    
T  20626068 tgcctttctaaacccttgtttcagccccctctatctctctcaaagtttagtctgatagaaggtctatatttata 20625995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 20629959 - 20629886
Alignment:
Q  1 tgcctttttaaacccttgtttcagccccctctgtctctctcaaagtttgctatgaaacaaggtctatatttata 74  Q
    ||||||| |||||||||||||||||||||||| |||||||||||||||  | ||| | ||||||||||||||||    
T  20629959 tgcctttctaaacccttgtttcagccccctctatctctctcaaagtttagtctgatagaaggtctatatttata 20629886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 20642378 - 20642305
Alignment:
Q  1 tgcctttttaaacccttgtttcagccccctctgtctctctcaaagtttgctatgaaacaaggtctatatttata 74  Q
    ||||||| |||||||||||||||||||||||| |||||||||||||||  | ||| | ||||||||||||||||    
T  20642378 tgcctttctaaacccttgtttcagccccctctatctctctcaaagtttagtctgatagaaggtctatatttata 20642305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 13 - 83
Target Start/End: Complemental strand, 11757246 - 11757176
Alignment:
Q  13 cccttgtttcagccccctctgtctctctcaaagtttgctatgaaacaaggtctatatttatagtgaaagta 83  Q
    |||||||||||||||||||| |||||||||||||||    ||| |||||||||||||||||||| ||||||    
T  11757246 cccttgtttcagccccctctatctctctcaaagtttagcctgatacaaggtctatatttatagtaaaagta 11757176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 13 - 83
Target Start/End: Complemental strand, 20299476 - 20299406
Alignment:
Q  13 cccttgtttcagccccctctgtctctctcaaagtttgctatgaaacaaggtctatatttatagtgaaagta 83  Q
    |||||||||||||||||||| |||||||||||||||    ||| |||||||||||||||||||| ||||||    
T  20299476 cccttgtttcagccccctctatctctctcaaagtttagcctgatacaaggtctatatttatagtaaaagta 20299406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 28485596 - 28485514
Alignment:
Q  1 tgcctttttaaacccttgtttcagccccctctgtctctctcaaagtttgctatgaaacaaggtctatatttatagtgaaagta 83  Q
    ||||||| ||||||||||||||| |||| ||| |||||||||||||||    ||| |||||||||||||||||||| ||||||    
T  28485596 tgcctttctaaacccttgtttcaaccccttctatctctctcaaagtttagcctgatacaaggtctatatttatagtaaaagta 28485514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 108 - 185
Target Start/End: Complemental strand, 40945908 - 40945828
Alignment:
Q  108 tccatattaatttgttaaaggcacgaataaactatatgattattgatacacttgtataaaat---acaaataaagcatttt 185  Q
    ||||||||||||||||||||||  ||| || ||| |||||| ||||||||||||||||||||   ||||||||||||||||    
T  40945908 tccatattaatttgttaaaggcttgaaaaacctacatgatttttgatacacttgtataaaatacaacaaataaagcatttt 40945828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 27306488 - 27306566
Alignment:
Q  1 tgcctttttaaacccttgtttcagccccctctgtctctctcaaagtttgctatgaaacaaggtctatatttatagtgaaagta 83  Q
    ||||||| |||||||||||||||||||||||| ||||    ||||||| || ||| |||||||||||||||||||| ||||||    
T  27306488 tgcctttctaaacccttgtttcagccccctctatctc----aaagtttactctgatacaaggtctatatttatagtaaaagta 27306566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 1049554 - 1049631
Alignment:
Q  1 tgcctttttaaacccttgtttcagccccctctgtctctctcaaagtttgctatgaaacaaggtctatatttatagtgaaagt 82  Q
    ||||||| |||||||||||||||||||||    ||| |||||||||||||| | | |||||||||||||||||||| |||||    
T  1049554 tgcctttctaaacccttgtttcagccccc----tctatctcaaagtttgctctaatacaaggtctatatttatagtaaaagt 1049631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 3 - 75
Target Start/End: Complemental strand, 28487581 - 28487509
Alignment:
Q  3 cctttttaaacccttgtttcagccccctctgtctctctcaaagtttgctatgaaacaaggtctatatttatag 75  Q
    ||||| |||||||||||||||||||||||| |||||||||||||||    ||| ||| |||||||||||||||    
T  28487581 cctttctaaacccttgtttcagccccctctatctctctcaaagtttagcctgatacatggtctatatttatag 28487509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 11 - 83
Target Start/End: Complemental strand, 35649 - 35581
Alignment:
Q  11 aacccttgtttcagccccctctgtctctctcaaagtttgctatgaaacaaggtctatatttatagtgaaagta 83  Q
    |||||||||||||||||||||| ||||    |||||||||| ||| |||||||||||||||||||| ||||||    
T  35649 aacccttgtttcagccccctctatctc----aaagtttgctctgatacaaggtctatatttatagtaaaagta 35581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 4 - 70
Target Start/End: Complemental strand, 3878604 - 3878540
Alignment:
Q  4 ctttttaaacccttgtttcagccccctctgtctctctcaaagtttgctatgaaacaaggtctatatt 70  Q
    |||| |||||||||||||||||||||||  | |||||||||||||||| ||| ||||||||||||||    
T  3878604 ctttctaaacccttgtttcagccccctc--tatctctcaaagtttgctctgatacaaggtctatatt 3878540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 18345571 - 18345489
Alignment:
Q  1 tgcctttttaaacccttgtttcagccccctctgtctctctcaaagtttgctatgaaacaaggtctatatttatagtgaaagta 83  Q
    ||||||| ||||||||||||||| |||||||| |||| |||||||||     ||| |||||||||||||||||||| ||||||    
T  18345571 tgcctttctaaacccttgtttcaaccccctctatctccctcaaagttcagcctgatacaaggtctatatttatagtaaaagta 18345489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 9 - 83
Target Start/End: Complemental strand, 20297384 - 20297310
Alignment:
Q  9 taaacccttgtttcagccccctctgtctctctcaaagtttgctatgaaacaaggtctatatttatagtgaaagta 83  Q
    |||||||||||||||||||||||| |||||||||||||||    ||| |||||||| |||||| |||| ||||||    
T  20297384 taaacccttgtttcagccccctctatctctctcaaagtttagcctgatacaaggtccatatttttagtaaaagta 20297310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 7349532 - 7349616
Alignment:
Q  1 tgcctttttaaacccttgtttcagccccctc--tgtctctctcaaagtttgctatgaaacaaggtctatatttatagtgaaagta 83  Q
    ||||||| ||||||| |||||||||||||||  | |||||||||||||||    ||| |||||||||||||||||||| ||||||    
T  7349532 tgcctttctaaacccctgtttcagccccctctatctctctctcaaagtttagcctgatacaaggtctatatttatagtaaaagta 7349616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 7351911 - 7351995
Alignment:
Q  1 tgcctttttaaacccttgtttcagccccctc--tgtctctctcaaagtttgctatgaaacaaggtctatatttatagtgaaagta 83  Q
    ||||||| |||||||||||||||||||||||  | |||||||||||||||    ||| ||||||| |||||||||||| ||||||    
T  7351911 tgcctttctaaacccttgtttcagccccctctatctctctctcaaagtttagcctgatacaaggtttatatttatagtaaaagta 7351995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 9 - 81
Target Start/End: Complemental strand, 9680841 - 9680768
Alignment:
Q  9 taaacccttgtttcagccccctctgtctctctcaaagtttgc-tatgaaacaaggtctatatttatagtgaaag 81  Q
    ||||||||||||||| |||||||| |||||||||| |||| | | ||| |||||||||||||||||||| ||||    
T  9680841 taaacccttgtttcaaccccctctatctctctcaaggtttacatctgatacaaggtctatatttatagtaaaag 9680768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 9 - 83
Target Start/End: Complemental strand, 22392495 - 22392425
Alignment:
Q  9 taaacccttgtttcagccccctctgtctctctcaaagtttgctatgaaacaaggtctatatttatagtgaaagta 83  Q
    |||||||||||||||||||||||| ||||    ||||||| || ||| |||||||||||||||||||| ||||||    
T  22392495 taaacccttgtttcagccccctctatctc----aaagtttactctgatacaaggtctatatttatagtaaaagta 22392425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 31156170 - 31156248
Alignment:
Q  1 tgcctttttaaacccttgtttcagccccctctgtctctctcaaagtttgctatgaaacaaggtctatatttatagtgaaagta 83  Q
    ||||||| |||||||||||||||||||||    ||| |||||||||||||  ||| ||||| |||||||||||||| ||||||    
T  31156170 tgcctttctaaacccttgtttcagccccc----tctatctcaaagtttgccttgatacaagctctatatttatagtaaaagta 31156248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 14 - 76
Target Start/End: Complemental strand, 9679076 - 9679013
Alignment:
Q  14 ccttgtttcagccccctctgtctctctcaaagtttgc-tatgaaacaaggtctatatttatagt 76  Q
    ||||||||||||||||||| ||||||||||||||| | | ||| ||||| ||||||||||||||    
T  9679076 ccttgtttcagccccctctatctctctcaaagtttacatctgatacaagatctatatttatagt 9679013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 3 - 82
Target Start/End: Complemental strand, 25542558 - 25542484
Alignment:
Q  3 cctttttaaacccttgtttcagccccctctgtctctctcaaagtttgctatgaaacaaggtctatatttatagtgaaagt 82  Q
    ||||| |||||| |||||||||||||     ||| |||||||||||||| ||| |||||||||||||||||||| |||||    
T  25542558 cctttctaaacctttgtttcagcccc-----tctatctcaaagtttgctctgatacaaggtctatatttatagtaaaagt 25542484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 36 - 82
Target Start/End: Complemental strand, 22108160 - 22108114
Alignment:
Q  36 tctctcaaagtttgctatgaaacaaggtctatatttatagtgaaagt 82  Q
    |||||||||||||||| ||| |||||||||||||||||||| |||||    
T  22108160 tctctcaaagtttgctttgatacaaggtctatatttatagtaaaagt 22108114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 36 - 82
Target Start/End: Complemental strand, 22137171 - 22137125
Alignment:
Q  36 tctctcaaagtttgctatgaaacaaggtctatatttatagtgaaagt 82  Q
    |||||||||||||||| ||| |||||||||||||||||||| |||||    
T  22137171 tctctcaaagtttgctttgatacaaggtctatatttatagtaaaagt 22137125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 36 - 82
Target Start/End: Complemental strand, 40549920 - 40549874
Alignment:
Q  36 tctctcaaagtttgctatgaaacaaggtctatatttatagtgaaagt 82  Q
    |||||||||||||||| ||| |||||||||||||||||||| |||||    
T  40549920 tctctcaaagtttgctttgatacaaggtctatatttatagtaaaagt 40549874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 36 - 82
Target Start/End: Complemental strand, 40552198 - 40552152
Alignment:
Q  36 tctctcaaagtttgctatgaaacaaggtctatatttatagtgaaagt 82  Q
    |||||||||||||||| ||| |||||||||||||||||||| |||||    
T  40552198 tctctcaaagtttgctttgatacaaggtctatatttatagtaaaagt 40552152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 38 - 83
Target Start/End: Complemental strand, 1606467 - 1606422
Alignment:
Q  38 tctcaaagtttgctatgaaacaaggtctatatttatagtgaaagta 83  Q
    |||||||||||||| ||| |||||||||||||||||||| ||||||    
T  1606467 tctcaaagtttgctttgatacaaggtctatatttatagtaaaagta 1606422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 18567643 - 18567565
Alignment:
Q  1 tgcctttttaaacccttgtttcagccccctctgtctctctcaaagtttgctatgaaacaaggtctatatttatagtgaaagta 83  Q
    ||||||| |||||||||||||||||||| ||| ||||    ||||||| || ||| ||||| |||||||||||||| ||||||    
T  18567643 tgcctttctaaacccttgtttcagccccttctatctc----aaagtttactctgatacaagatctatatttatagtaaaagta 18567565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 31435306 - 31435384
Alignment:
Q  1 tgcctttttaaacccttgtttcagccccctctgtctctctcaaagtttgctatgaaacaaggtctatatttatagtgaaagta 83  Q
    ||||||| |||||||||||||||||||| ||| ||||    ||||||| || ||| ||||| |||||||||||||| ||||||    
T  31435306 tgcctttctaaacccttgtttcagccccttctatctc----aaagtttactctgatacaagatctatatttatagtaaaagta 31435384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 9 - 83
Target Start/End: Complemental strand, 7188565 - 7188495
Alignment:
Q  9 taaacccttgtttcagccccctctgtctctctcaaagtttgctatgaaacaaggtctatatttatagtgaaagta 83  Q
    |||||||||||||||||||||    ||| |||||| |||| || ||| |||| ||||||||||||||| ||||||    
T  7188565 taaacccttgtttcagccccc----tctatctcaaggtttactctgatacaaagtctatatttatagtaaaagta 7188495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 65 - 105
Target Start/End: Original strand, 7464829 - 7464870
Alignment:
Q  65 tatatttatagtg-aaagtaatcccttaaaaaactgaaacaa 105  Q
    ||||||||||||| ||||||| ||||||||||||||||||||    
T  7464829 tatatttatagtggaaagtaaacccttaaaaaactgaaacaa 7464870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 37 - 82
Target Start/End: Original strand, 9027395 - 9027440
Alignment:
Q  37 ctctcaaagtttgctatgaaacaaggtctatatttatagtgaaagt 82  Q
    ||||| ||||||||| ||| |||||||||||||||||||| |||||    
T  9027395 ctctccaagtttgctttgatacaaggtctatatttatagtaaaagt 9027440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 65 - 105
Target Start/End: Complemental strand, 25351225 - 25351184
Alignment:
Q  65 tatatttatagtg-aaagtaatcccttaaaaaactgaaacaa 105  Q
    ||||||||||||| ||||||| ||||||||||||||||||||    
T  25351225 tatatttatagtggaaagtaaacccttaaaaaactgaaacaa 25351184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 65 - 105
Target Start/End: Complemental strand, 25356919 - 25356878
Alignment:
Q  65 tatatttatagtg-aaagtaatcccttaaaaaactgaaacaa 105  Q
    ||||||||||||| ||||||| ||||||||||||||||||||    
T  25356919 tatatttatagtggaaagtaaacccttaaaaaactgaaacaa 25356878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 65 - 105
Target Start/End: Complemental strand, 25410002 - 25409961
Alignment:
Q  65 tatatttatagtg-aaagtaatcccttaaaaaactgaaacaa 105  Q
    ||||||||||||| ||||||| ||||||||||||||||||||    
T  25410002 tatatttatagtggaaagtaaacccttaaaaaactgaaacaa 25409961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 65 - 105
Target Start/End: Complemental strand, 30246841 - 30246800
Alignment:
Q  65 tatatttatagtg-aaagtaatcccttaaaaaactgaaacaa 105  Q
    ||||||||||||| ||||||| ||||||||||||||||||||    
T  30246841 tatatttatagtggaaagtaaacccttaaaaaactgaaacaa 30246800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 65 - 105
Target Start/End: Original strand, 34547174 - 34547215
Alignment:
Q  65 tatatttatagtg-aaagtaatcccttaaaaaactgaaacaa 105  Q
    ||||||||||||| ||||||| ||||||||||||||||||||    
T  34547174 tatatttatagtggaaagtaaacccttaaaaaactgaaacaa 34547215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 9 - 83
Target Start/End: Original strand, 42331266 - 42331336
Alignment:
Q  9 taaacccttgtttcagccccctctgtctctctcaaagtttgctatgaaacaaggtctatatttatagtgaaagta 83  Q
    |||||||||||||||||||||    ||| |||||||||||  | ||| |||| ||||||||||||||| ||||||    
T  42331266 taaacccttgtttcagccccc----tctatctcaaagtttagtctgatacaaagtctatatttatagtaaaagta 42331336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 65 - 105
Target Start/End: Original strand, 44512836 - 44512877
Alignment:
Q  65 tatatttatagtg-aaagtaatcccttaaaaaactgaaacaa 105  Q
    ||||||||||||| ||||||| ||||||||||||||||||||    
T  44512836 tatatttatagtggaaagtaaacccttaaaaaactgaaacaa 44512877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 34 - 82
Target Start/End: Complemental strand, 2935354 - 2935306
Alignment:
Q  34 tctctctcaaagtttgctatgaaacaaggtctatatttatagtgaaagt 82  Q
    |||| |||| |||||||| ||| |||||||||||||||||||| |||||    
T  2935354 tctcactcagagtttgctttgatacaaggtctatatttatagtaaaagt 2935306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 11355288 - 11355252
Alignment:
Q  1 tgcctttttaaacccttgtttcagccccctctgtctc 37  Q
    ||||||| |||||||||||||||||||||||| ||||    
T  11355288 tgcctttctaaacccttgtttcagccccctctatctc 11355252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 20137368 - 20137404
Alignment:
Q  1 tgcctttttaaacccttgtttcagccccctctgtctc 37  Q
    ||||||| |||||||||||||||||||||||| ||||    
T  20137368 tgcctttctaaacccttgtttcagccccctctatctc 20137404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 21678096 - 21678060
Alignment:
Q  1 tgcctttttaaacccttgtttcagccccctctgtctc 37  Q
    ||||||| |||||||||||||||||||||||| ||||    
T  21678096 tgcctttctaaacccttgtttcagccccctctatctc 21678060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 21680057 - 21680021
Alignment:
Q  1 tgcctttttaaacccttgtttcagccccctctgtctc 37  Q
    ||||||| |||||||||||||||||||||||| ||||    
T  21680057 tgcctttctaaacccttgtttcagccccctctatctc 21680021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 24258493 - 24258457
Alignment:
Q  1 tgcctttttaaacccttgtttcagccccctctgtctc 37  Q
    ||||||| |||||||||||||||||||||||| ||||    
T  24258493 tgcctttctaaacccttgtttcagccccctctatctc 24258457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 26804599 - 26804563
Alignment:
Q  1 tgcctttttaaacccttgtttcagccccctctgtctc 37  Q
    ||||||| |||||||||||||||||||||||| ||||    
T  26804599 tgcctttctaaacccttgtttcagccccctctatctc 26804563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 38396346 - 38396306
Alignment:
Q  1 tgcctttttaaacccttgtttcagccccctctgtctctctc 41  Q
    ||||||| |||||||||||||||||||||||  ||||||||    
T  38396346 tgcctttctaaacccttgtttcagccccctccctctctctc 38396306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 89; Significance: 5e-43; HSPs: 41)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 1 - 105
Target Start/End: Complemental strand, 4410081 - 4409977
Alignment:
Q  1 tgcctttttaaacccttgtttcagccccctctgtctctctcaaagtttgctatgaaacaaggtctatatttatagtgaaagtaatcccttaaaaaactga 100  Q
    ||||||| |||||||||||||||||||||||| |||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||    
T  4410081 tgcctttctaaacccttgtttcagccccctctatctctctcaaagtttgctctgatacaaggtctatatttatagtgaaagtaatcccttaaaaaactga 4409982  T
Q  101 aacaa 105  Q
    |||||    
T  4409981 aacaa 4409977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 1 - 105
Target Start/End: Complemental strand, 39854503 - 39854404
Alignment:
Q  1 tgcctttttaaacccttgtttcagccccctctgtctctctcaaagtttgctatgaaacaaggtctatatttatagtgaaagtaatcccttaaaaaactga 100  Q
    ||||||| ||||||||||||||||||||     ||| |||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||    
T  39854503 tgcctttctaaacccttgtttcagcccc-----tctatctcaaagtttgctctgatacaaggtctatatttatagtgaaagtaatcccttaaaaaactga 39854409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 9 - 105
Target Start/End: Complemental strand, 6747318 - 6747224
Alignment:
Q  9 taaacccttgtttcagccccctctgtctctctcaaagtttgctatgaaacaaggtctatatttatagtgaaagtaatcccttaaaaaactgaaacaa 105  Q
    |||||||||||||||||||||||| ||||| ||    |||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  6747318 taaacccttgtttcagccccctctatctctttctc--tttgctctgatacaaggtctatatttatagtgaaagtaatcccttaaaaaactgaaacaa 6747224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 10529358 - 10529455
Alignment:
Q  1 tgcctttttaaacccttgtttcagccccctctgtctctctcaaagtttgctatgaaacaaggtctatatttatagtgaaagtaatcccttaaaaaactga 100  Q
    ||||||| ||||||||||||||| ||| |||| ||||    |||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||    
T  10529358 tgcctttctaaacccttgtttcaacccactctatctc----aaagtttgctctgatacaaggtctatatttatagtgaaagtaatcccttaaaaaactga 10529453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 18469031 - 18468949
Alignment:
Q  1 tgcctttttaaacccttgtttcagccccctctgtctctctcaaagtttgctatgaaacaaggtctatatttatagtgaaagta 83  Q
    ||||||| |||||||||||||||||||||||| |||||||||||||||   |||| |||||||||||||||||||| ||||||    
T  18469031 tgcctttctaaacccttgtttcagccccctctatctctctcaaagtttatcatgatacaaggtctatatttatagtaaaagta 18468949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 46 - 105
Target Start/End: Complemental strand, 6745040 - 6744981
Alignment:
Q  46 tttgctatgaaacaaggtctatatttatagtgaaagtaatcccttaaaaaactgaaacaa 105  Q
    |||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  6745040 tttgctctgatacaaggtctatatttatagtgaaagtaatcccttaaaaaactgaaacaa 6744981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 18466704 - 18466629
Alignment:
Q  1 tgcctttttaaacccttgtttcagccccctctgtctctctcaaagtttgctatgaaacaaggtctatatttatagt 76  Q
    ||||||| |||||||||||||||||||||||| |||||||||||||||    ||| ||||||||||||||||||||    
T  18466704 tgcctttctaaacccttgtttcagccccctctatctctctcaaagtttagcctgatacaaggtctatatttatagt 18466629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 1189868 - 1189957
Alignment:
Q  1 tgcctttttaaacccttgtttcagccccctctgtctctctcaaagtttgc-tatgaaacaaggtctatatttatagtgaaagtaatccct 89  Q
    ||||||| ||||| |||||||||||||||||| |||||||||| |||| | | ||| |||||||||||||||||||| |||| |||||||    
T  1189868 tgcctttctaaactcttgtttcagccccctctatctctctcaaggtttacatctgatacaaggtctatatttatagtaaaagcaatccct 1189957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 31542755 - 31542678
Alignment:
Q  1 tgcctttttaaacccttgtttcagccccctctgtctctctcaaagtttgctatgaaacaaggtctatatttatagtgaaagt 82  Q
    ||||||| |||||||||||||||||||||||| ||||    |||||||||| ||| |||||||||||||||||||| |||||    
T  31542755 tgcctttctaaacccttgtttcagccccctctatctc----aaagtttgctttgatacaaggtctatatttatagtaaaagt 31542678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 4 - 83
Target Start/End: Original strand, 25921735 - 25921810
Alignment:
Q  4 ctttttaaacccttgtttcagccccctctgtctctctcaaagtttgctatgaaacaaggtctatatttatagtgaaagta 83  Q
    |||| |||||||||||||||||||||||| ||||    |||||||||| ||| |||||||||||||||||||| ||||||    
T  25921735 ctttctaaacccttgtttcagccccctctatctc----aaagtttgctctgatacaaggtctatatttatagtaaaagta 25921810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 31545100 - 31545023
Alignment:
Q  1 tgcctttttaaacccttgtttcagccccctctgtctctctcaaagtttgctatgaaacaaggtctatatttatagtgaaagt 82  Q
    ||||||| |||||||||||||||||||||    | | |||||||||||||| ||| |||||||||||||||||||| |||||    
T  31545100 tgcctttctaaacccttgtttcagccccc----tttatctcaaagtttgctttgatacaaggtctatatttatagtaaaagt 31545023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 3 - 83
Target Start/End: Original strand, 2818597 - 2818673
Alignment:
Q  3 cctttttaaacccttgtttcagccccctctgtctctctcaaagtttgctatgaaacaaggtctatatttatagtgaaagta 83  Q
    ||||| |||||||||||||||||||||||| ||||    ||||||| || ||| |||||||||||||||||||| ||||||    
T  2818597 cctttctaaacccttgtttcagccccctctatctc----aaagtttactctgatacaaggtctatatttatagtaaaagta 2818673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 38882126 - 38882048
Alignment:
Q  1 tgcctttttaaacccttgtttcagccccctctgtctctctcaaagtttgctatgaaacaaggtctatatttatagtgaaagt 82  Q
    ||||||| |||||||||||||||||||||    ||| |||| ||||||||| ||| |||||||||||||||||||| |||||    
T  38882126 tgcctttctaaacccttgtttcagcccccc---tctatctccaagtttgctctgatacaaggtctatatttatagtaaaagt 38882048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 9 - 83
Target Start/End: Complemental strand, 10586854 - 10586781
Alignment:
Q  9 taaacccttgtttcagccccctctgtctctctcaaagtttgctatgaaacaaggtctatatttatagtgaaagta 83  Q
    |||||||||||||||||||| ||| |||||||||||||||    ||| |||||||||||||||||||| ||||||    
T  10586854 taaacccttgtttcagcccc-tctatctctctcaaagtttagcctgatacaaggtctatatttatagtaaaagta 10586781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 20507721 - 20507799
Alignment:
Q  1 tgcctttttaaacccttgtttcagccccctctgtctctctcaaagtttgctatgaaacaaggtctatatttatagtgaaagta 83  Q
    ||||||| |||||||||||||||||||||    ||| ||||||||||| || ||| ||||| |||||||||||||| ||||||    
T  20507721 tgcctttctaaacccttgtttcagccccc----tctatctcaaagtttactctgatacaagatctatatttatagtaaaagta 20507799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 27912556 - 27912472
Alignment:
Q  1 tgcctttttaaacccttgtttcagccccctc--tgtctctctcaaagtttgctatgaaacaaggtctatatttatagtgaaagta 83  Q
    ||||||| ||||||||||||||||| |||||  | |||||||||||||||    ||| |||||||||||||||||||| ||||||    
T  27912556 tgcctttctaaacccttgtttcagcaccctctatctctctctcaaagtttagcctgatacaaggtctatatttatagtaaaagta 27912472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 21684710 - 21684750
Alignment:
Q  1 tgcctttttaaacccttgtttcagccccctctgtctctctc 41  Q
    |||||||||||||||||||||||||||||||| ||||||||    
T  21684710 tgcctttttaaacccttgtttcagccccctctatctctctc 21684750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 31179630 - 31179707
Alignment:
Q  1 tgcctttttaaacccttgtttcagccccctctgtctctctcaaagtttgctatgaaacaaggtctatatttatagtgaaagt 82  Q
    ||||||| ||||||||||||||||| |||||| ||||    |||||||||| ||| |||| ||||||||||||||| |||||    
T  31179630 tgcctttctaaacccttgtttcagctccctctatctc----aaagtttgctttgatacaatgtctatatttatagtaaaagt 31179707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 16776178 - 16776099
Alignment:
Q  1 tgcctttttaaacccttgtttcagccccctctgtctctctcaaagtttgctatgaaacaaggtctata-tttatagtgaaagta 83  Q
    ||||||| |||||||||||||||||||||    ||| ||||||||||||||  || |||||||||||| |||||||| ||||||    
T  16776178 tgcctttgtaaacccttgtttcagccccc----tctatctcaaagtttgctcagatacaaggtctatattttatagtaaaagta 16776099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 9 - 74
Target Start/End: Original strand, 18511479 - 18511542
Alignment:
Q  9 taaacccttgtttcagccccctctgtctctctcaaagtttgctatgaaacaaggtctatatttata 74  Q
    |||||||||||||||||||||||  | |||||||||||||  | ||| ||||||||||||||||||    
T  18511479 taaacccttgtttcagccccctc--tatctctcaaagtttagtctgatacaaggtctatatttata 18511542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 36 - 82
Target Start/End: Complemental strand, 23665127 - 23665081
Alignment:
Q  36 tctctcaaagtttgctatgaaacaaggtctatatttatagtgaaagt 82  Q
    |||||||||||||||| ||| |||||||||||||||||||| |||||    
T  23665127 tctctcaaagtttgctttgatacaaggtctatatttatagtaaaagt 23665081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 36 - 82
Target Start/End: Complemental strand, 23667402 - 23667356
Alignment:
Q  36 tctctcaaagtttgctatgaaacaaggtctatatttatagtgaaagt 82  Q
    |||||||||||||||| ||| |||||||||||||||||||| |||||    
T  23667402 tctctcaaagtttgctttgatacaaggtctatatttatagttaaagt 23667356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 36 - 82
Target Start/End: Original strand, 23742055 - 23742101
Alignment:
Q  36 tctctcaaagtttgctatgaaacaaggtctatatttatagtgaaagt 82  Q
    |||||||||||||||| ||| |||||||||||||||||||| |||||    
T  23742055 tctctcaaagtttgctttgacacaaggtctatatttatagtaaaagt 23742101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 36 - 82
Target Start/End: Original strand, 23793460 - 23793506
Alignment:
Q  36 tctctcaaagtttgctatgaaacaaggtctatatttatagtgaaagt 82  Q
    |||||||||||||||| ||| |||||||||||||||||||| |||||    
T  23793460 tctctcaaagtttgctttgatacaaggtctatatttatagtaaaagt 23793506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 38 - 83
Target Start/End: Original strand, 3373333 - 3373378
Alignment:
Q  38 tctcaaagtttgctatgaaacaaggtctatatttatagtgaaagta 83  Q
    |||||||||||||| ||| |||||||||||||||||||| ||||||    
T  3373333 tctcaaagtttgctttgatacaaggtctatatttatagtaaaagta 3373378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 4236649 - 4236571
Alignment:
Q  1 tgcctttttaaacccttgtttcagccccctctgtctctctcaaagtttgctatgaaacaaggtctatatttatagtgaaagta 83  Q
    ||||||| ||||| |||||||||||||||| | ||||     ||||||||| ||| |||||||||||||||||||| ||||||    
T  4236649 tgcctttctaaactcttgtttcagccccctttatctcc----aagtttgctctgatacaaggtctatatttatagtaaaagta 4236571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 9 - 83
Target Start/End: Original strand, 12556190 - 12556260
Alignment:
Q  9 taaacccttgtttcagccccctctgtctctctcaaagtttgctatgaaacaaggtctatatttatagtgaaagta 83  Q
    ||||||||| |||||||||||||| ||||    ||||||| || ||| |||||||||||||||||||| ||||||    
T  12556190 taaacccttatttcagccccctctatctc----aaagtttactctgatacaaggtctatatttatagtaaaagta 12556260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 27910470 - 27910387
Alignment:
Q  1 tgcctttttaaacccttgtttcagccccctctgtctctctc--aaagtttgctatgaaacaaggtctatatttatagtgaaagta 83  Q
    |||||||||||||| |||||||||||||| || ||||||||  |||||||    ||| |||||||||||||||||||| ||||||    
T  27910470 tgcctttttaaacc-ttgtttcagcccccgctatctctctctcaaagtttaacctgatacaaggtctatatttatagtaaaagta 27910387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 34 - 82
Target Start/End: Original strand, 15354770 - 15354818
Alignment:
Q  34 tctctctcaaagtttgctatgaaacaaggtctatatttatagtgaaagt 82  Q
    |||||| ||||||||||| ||| |||||||||||||||||||| |||||    
T  15354770 tctctcccaaagtttgctttgatacaaggtctatatttatagtaaaagt 15354818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 34 - 82
Target Start/End: Original strand, 15357046 - 15357094
Alignment:
Q  34 tctctctcaaagtttgctatgaaacaaggtctatatttatagtgaaagt 82  Q
    |||||| ||||||||||| ||| |||||||||||||||||||| |||||    
T  15357046 tctctcccaaagtttgctttgatacaaggtctatatttatagtaaaagt 15357094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 34477313 - 34477353
Alignment:
Q  1 tgcctttttaaacccttgtttcagccccctctgtctctctc 41  Q
    ||||||| |||||||||||||||||||||||| ||||||||    
T  34477313 tgcctttctaaacccttgtttcagccccctctatctctctc 34477353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 34479678 - 34479718
Alignment:
Q  1 tgcctttttaaacccttgtttcagccccctctgtctctctc 41  Q
    ||||||| |||||||||||||||||||||||| ||||||||    
T  34479678 tgcctttctaaacccttgtttcagccccctctatctctctc 34479718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 65 - 105
Target Start/End: Complemental strand, 40222634 - 40222594
Alignment:
Q  65 tatatttatagtgaaagtaatcccttaaaaaactgaaacaa 105  Q
    ||||||||||||||||||||||| |||||||| ||||||||    
T  40222634 tatatttatagtgaaagtaatcctttaaaaaattgaaacaa 40222594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 2174939 - 2174863
Alignment:
Q  1 tgcctttttaaacccttgtttcagccccctctgtctctctcaaagtttgctatgaaacaaggtctatatttatagtgaaag 81  Q
    ||||||| |||||||||||||||||||||    ||| |||| ||||||||| ||| |||||| || |||||||||| ||||    
T  2174939 tgcctttctaaacccttgtttcagccccc----tctatctccaagtttgctctgatacaaggcctgtatttatagtaaaag 2174863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 20043070 - 20042994
Alignment:
Q  1 tgcctttttaaacccttgtttcagccccctctgtctctctcaaagtttgctatgaaacaaggtctatatttatagtgaaag 81  Q
    ||||||| ||||| |||||||||||||||    ||| |||||| ||||||||||| |||| | ||||||||||||| ||||    
T  20043070 tgcctttctaaacacttgtttcagccccc----tctatctcaaggtttgctatgatacaaagcctatatttatagtaaaag 20042994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 9 - 81
Target Start/End: Complemental strand, 20045022 - 20044954
Alignment:
Q  9 taaacccttgtttcagccccctctgtctctctcaaagtttgctatgaaacaaggtctatatttatagtgaaag 81  Q
    |||||||||||||||||||||||||    |||||| ||||||| ||| |||| | ||||||||||||| ||||    
T  20045022 taaacccttgtttcagccccctctg----tctcaaggtttgctctgatacaaagcctatatttatagtaaaag 20044954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 4 - 83
Target Start/End: Complemental strand, 21948043 - 21947969
Alignment:
Q  4 ctttttaaacccttgtttcagccccctctgtctctctcaaagtttgctatgaaacaaggtctatatttatagtgaaagta 83  Q
    |||| ||||||||||||||||||||     ||| ||||||| ||| || ||| |||||||||||||||||||| ||||||    
T  21948043 ctttctaaacccttgtttcagcccc-----tctatctcaaaatttactctgatacaaggtctatatttatagtaaaagta 21947969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 9 - 76
Target Start/End: Original strand, 18509585 - 18509649
Alignment:
Q  9 taaacccttgtttcagccccctctgtctctctcaaagtttgctatgaaacaaggtctatatttatagt 76  Q
    ||||||||||||||||||||   | | |||||||||||||  | ||| ||||||||||||||||||||    
T  18509585 taaacccttgtttcagcccc---tctatctctcaaagtttagtctgatacaaggtctatatttatagt 18509649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 65 - 105
Target Start/End: Original strand, 35385763 - 35385804
Alignment:
Q  65 tatatttatagtg-aaagtaatcccttaaaaaactgaaacaa 105  Q
    ||||||||||||| ||||||| ||||||||||||||||||||    
T  35385763 tatatttatagtggaaagtaaacccttaaaaaactgaaacaa 35385804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 9 - 83
Target Start/End: Original strand, 36402595 - 36402665
Alignment:
Q  9 taaacccttgtttcagccccctctgtctctctcaaagtttgctatgaaacaaggtctatatttatagtgaaagta 83  Q
    |||||||||||||||||||||||| ||||    || |||| || ||| | |||||||||||||||||| ||||||    
T  36402595 taaacccttgtttcagccccctctatctc----aacgtttactctgatataaggtctatatttatagtaaaagta 36402665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 37 - 82
Target Start/End: Original strand, 38960333 - 38960378
Alignment:
Q  37 ctctcaaagtttgctatgaaacaaggtctatatttatagtgaaagt 82  Q
    ||||| ||||||||| ||| |||||||||||||||||||| |||||    
T  38960333 ctctccaagtttgctttgatacaaggtctatatttatagtaaaagt 38960378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 89; Significance: 5e-43; HSPs: 30)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 1 - 105
Target Start/End: Original strand, 5377688 - 5377792
Alignment:
Q  1 tgcctttttaaacccttgtttcagccccctctgtctctctcaaagtttgctatgaaacaaggtctatatttatagtgaaagtaatcccttaaaaaactga 100  Q
    ||||||| |||||||||||||||| ||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  5377688 tgcctttctaaacccttgtttcagtcccctctatctctctcaaagtttgctctgaaacaaggtctatatttatagtgaaagtaatcccttaaaaaactga 5377787  T
Q  101 aacaa 105  Q
    |||||    
T  5377788 aacaa 5377792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 9 - 105
Target Start/End: Original strand, 45280252 - 45280344
Alignment:
Q  9 taaacccttgtttcagccccctctgtctctctcaaagtttgctatgaaacaaggtctatatttatagtgaaagtaatcccttaaaaaactgaaacaa 105  Q
    |||||||||||||||||||||||| ||||    |||||||||| ||| ||||||| |||||||||||||||||||||||||||||||||||||||||    
T  45280252 taaacccttgtttcagccccctctatctc----aaagtttgctctgatacaaggtatatatttatagtgaaagtaatcccttaaaaaactgaaacaa 45280344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 23452496 - 23452578
Alignment:
Q  1 tgcctttttaaacccttgtttcagccccctctgtctctctcaaagtttgctatgaaacaaggtctatatttatagtgaaagta 83  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||    ||| |||||||||||||||||||| ||||||    
T  23452496 tgcctttctaaacccttgtttcagccccctctgtctctctcaaagtttagcctgatacaaggtctatatttatagtaaaagta 23452578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 24162471 - 24162548
Alignment:
Q  1 tgcctttttaaacccttgtttcagccccctctgtctctctcaaagtttgctatgaaacaaggtctatatttatagtgaaagt 82  Q
    ||||||| |||||||||||||||||||||||| ||||    |||||||||| ||| |||||||||||||||||||| |||||    
T  24162471 tgcctttctaaacccttgtttcagccccctctatctc----aaagtttgctctgatacaaggtctatatttatagtaaaagt 24162548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 40032317 - 40032395
Alignment:
Q  1 tgcctttttaaacccttgtttcagccccctctgtctctctcaaagtttgctatgaaacaaggtctatatttatagtgaaagta 83  Q
    ||||||| |||||||||||||||||||||||| ||||    ||||||| || ||| |||||||||||||||||||| ||||||    
T  40032317 tgcctttctaaacccttgtttcagccccctctatctc----aaagtttactctgatacaaggtctatatttatagtaaaagta 40032395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 13910303 - 13910380
Alignment:
Q  1 tgcctttttaaacccttgtttcagccccctctgtctctctcaaagtttgctatgaaacaaggtctatatttatagtgaaagt 82  Q
    ||||||| |||||||||||||||||||||    ||| |||| ||||||||| ||| |||||||||||||||||||| |||||    
T  13910303 tgcctttctaaacccttgtttcagccccc----tctatctccaagtttgctctgatacaaggtctatatttatagtaaaagt 13910380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 19504604 - 19504681
Alignment:
Q  1 tgcctttttaaacccttgtttcagccccctctgtctctctcaaagtttgctatgaaacaaggtctatatttatagtgaaagt 82  Q
    ||||||| |||||||||||||||||||||    ||| |||| ||||||||| ||| |||||||||||||||||||| |||||    
T  19504604 tgcctttctaaacccttgtttcagccccc----tctatctccaagtttgctctgatacaaggtctatatttatagtaaaagt 19504681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 42064511 - 42064433
Alignment:
Q  1 tgcctttttaaacccttgtttcagccccctctgtctctctcaaagtttgctatgaaacaaggtctatatttatagtgaaagta 83  Q
    ||||||| ||||||||||||||||| |||||| ||||     ||||||||| ||| |||||||||||||||||||| ||||||    
T  42064511 tgcctttctaaacccttgtttcagctccctctatctcc----aagtttgctctgatacaaggtctatatttatagtaaaagta 42064433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 27104795 - 27104718
Alignment:
Q  1 tgcctttttaaacccttgtttcagccccctctgtctctctcaaagtttgctatgaaacaaggtctatatttatagtgaaagt 82  Q
    ||||||| | |||||||||||||||||||||| ||||    ||||||| || ||| |||||||||||||||||||| |||||    
T  27104795 tgcctttctgaacccttgtttcagccccctctatctc----aaagttttctctgatacaaggtctatatttatagtaaaagt 27104718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 21520952 - 21521032
Alignment:
Q  1 tgcctttttaaacccttgtttcagccccctctgtctctctcaaagtttgctatgaaacaaggtctatatttatagtgaaagta 83  Q
    ||||||| |||||||||||||||||||| ||  | |||||||||||||  | ||| ||||||| |||||||||||| ||||||    
T  21520952 tgcctttctaaacccttgtttcagccccatc--tatctctcaaagtttagtctgatacaaggtttatatttatagtaaaagta 21521032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 9 - 83
Target Start/End: Original strand, 42923776 - 42923848
Alignment:
Q  9 taaacccttgtttcagccccctctgtctctctcaaagtttgctatgaaacaaggtctatatttatagtgaaagta 83  Q
    |||||||||||||||||| ||||| ||||||  || |||| ||||||  ||||||||||||||||||| ||||||    
T  42923776 taaacccttgtttcagcctcctctatctctc--aaggtttactatgattcaaggtctatatttatagtaaaagta 42923848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 22287595 - 22287673
Alignment:
Q  1 tgcctttttaaacccttgtttcagccccctctgtctctctcaaagtttgctatgaaacaaggtctatatttatagtgaaagta 83  Q
    ||||||| |||||||||||||||||||||    | | ||||||||||| || | | |||||||||||||||||||| ||||||    
T  22287595 tgcctttctaaacccttgtttcagccccc----tatatctcaaagtttactttaatacaaggtctatatttatagtaaaagta 22287673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 42452779 - 42452701
Alignment:
Q  1 tgcctttttaaacccttgtttcagccccctctgtctctctcaaagtttgctatgaaacaaggtctatatttatagtgaaagta 83  Q
    ||||||| |||||||||||||||||||||    ||| |||| ||||||||| ||| |||| ||||||||||||| | ||||||    
T  42452779 tgcctttctaaacccttgtttcagccccc----tctatctccaagtttgctctgatacaatgtctatatttataataaaagta 42452701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 19007636 - 19007560
Alignment:
Q  1 tgcctttttaaacccttgtttcagccccctctgtctctctcaaagtttgctatgaaacaaggtctatatttatagtgaaag 81  Q
    ||||||| |||||||||||||||||||||    ||| |||||| |||| |||||| |||| | ||||||||||||| ||||    
T  19007636 tgcctttctaaacccttgtttcagccccc----tctatctcaaggtttactatgatacaaagcctatatttatagtaaaag 19007560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 6264404 - 6264475
Alignment:
Q  1 tgcctttttaaacccttgtttcagccccctctgtctctctcaaagtttgctatgaaacaaggtctatatttatagt 76  Q
    ||||||| |||||| ||||||||||||||    ||| |||||||||||  | ||| ||||||||||||||||||||    
T  6264404 tgcctttctaaacctttgtttcagccccc----tctatctcaaagtttagtctgatacaaggtctatatttatagt 6264475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 29 - 95
Target Start/End: Complemental strand, 20589633 - 20589567
Alignment:
Q  29 ctctgtctctctcaaagtttgctatgaaacaaggtctatatttatagtgaaagtaatcccttaaaaa 95  Q
    |||| |||||||||| ||||  | ||| |||||||||||||||||||| |||| ||||||| |||||    
T  20589633 ctctctctctctcaaggtttcatctgatacaaggtctatatttatagtaaaagcaatccctcaaaaa 20589567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 65 - 105
Target Start/End: Original strand, 12781531 - 12781572
Alignment:
Q  65 tatatttatagtg-aaagtaatcccttaaaaaactgaaacaa 105  Q
    ||||||||||||| ||||||| ||||||||||||||||||||    
T  12781531 tatatttatagtggaaagtaaacccttaaaaaactgaaacaa 12781572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 65 - 105
Target Start/End: Complemental strand, 17943409 - 17943368
Alignment:
Q  65 tatatttatagtg-aaagtaatcccttaaaaaactgaaacaa 105  Q
    ||||||||||||| ||||||| ||||||||||||||||||||    
T  17943409 tatatttatagtggaaagtaaacccttaaaaaactgaaacaa 17943368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 65 - 105
Target Start/End: Original strand, 20050333 - 20050374
Alignment:
Q  65 tatatttatagtg-aaagtaatcccttaaaaaactgaaacaa 105  Q
    ||||||||||||| ||||||| ||||||||||||||||||||    
T  20050333 tatatttatagtggaaagtaaacccttaaaaaactgaaacaa 20050374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 65 - 105
Target Start/End: Original strand, 20055076 - 20055117
Alignment:
Q  65 tatatttatagtg-aaagtaatcccttaaaaaactgaaacaa 105  Q
    ||||||||||||| ||||||| ||||||||||||||||||||    
T  20055076 tatatttatagtggaaagtaaacccttaaaaaactgaaacaa 20055117  T

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Target: chr2; HSP #21
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 65 - 105
Target Start/End: Original strand, 22712827 - 22712868
Alignment:
Q  65 tatatttatagtg-aaagtaatcccttaaaaaactgaaacaa 105  Q
    ||||||||||||| ||||||| ||||||||||||||||||||    
T  22712827 tatatttatagtggaaagtaaacccttaaaaaactgaaacaa 22712868  T

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Target: chr2; HSP #22
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 65 - 105
Target Start/End: Original strand, 27517952 - 27517993
Alignment:
Q  65 tatatttatagtg-aaagtaatcccttaaaaaactgaaacaa 105  Q
    ||||||||||||| ||||||| ||||||||||||||||||||    
T  27517952 tatatttatagtggaaagtaaacccttaaaaaactgaaacaa 27517993  T

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Target: chr2; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 9 - 83
Target Start/End: Original strand, 35215853 - 35215933
Alignment:
Q  9 taaacccttgtttcagcccc------ctctgtctctctcaaagtttgctatgaaacaaggtctatatttatagtgaaagta 83  Q
    ||||||||||||||||||||      |||| |||||||||||||||    ||| |||||||||||||||||||| ||||||    
T  35215853 taaacccttgtttcagccccctctatctctctctctctcaaagtttagcctgatacaaggtctatatttatagtaaaagta 35215933  T

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Target: chr2; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 65 - 105
Target Start/End: Original strand, 35894572 - 35894613
Alignment:
Q  65 tatatttatagtg-aaagtaatcccttaaaaaactgaaacaa 105  Q
    ||||||||||||| ||||||| ||||||||||||||||||||    
T  35894572 tatatttatagtggaaagtaaacccttaaaaaactgaaacaa 35894613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 37 - 82
Target Start/End: Original strand, 36559066 - 36559111
Alignment:
Q  37 ctctcaaagtttgctatgaaacaaggtctatatttatagtgaaagt 82  Q
    ||||| ||||||||| ||| |||||||||||||||||||| |||||    
T  36559066 ctctccaagtttgctttgatacaaggtctatatttatagtaaaagt 36559111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 37 - 82
Target Start/End: Original strand, 36561343 - 36561388
Alignment:
Q  37 ctctcaaagtttgctatgaaacaaggtctatatttatagtgaaagt 82  Q
    ||||| ||||||||| ||| |||||||||||||||||||| |||||    
T  36561343 ctctccaagtttgctttgatacaaggtctatatttatagtaaaagt 36561388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 38020198 - 38020161
Alignment:
Q  1 tgcctttttaaacccttgtttcagccccctctgtctct 38  Q
    ||||||| |||||||||||||||||||||||| |||||    
T  38020198 tgcctttctaaacccttgtttcagccccctctatctct 38020161  T

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Target: chr2; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 37 - 82
Target Start/End: Original strand, 45332383 - 45332428
Alignment:
Q  37 ctctcaaagtttgctatgaaacaaggtctatatttatagtgaaagt 82  Q
    ||||| ||||||||| ||| |||||||||||||||||||| |||||    
T  45332383 ctctccaagtttgctttgatacaaggtctatatttatagtaaaagt 45332428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 31733024 - 31733060
Alignment:
Q  1 tgcctttttaaacccttgtttcagccccctctgtctc 37  Q
    ||||||| |||||||||||||||||||||||| ||||    
T  31733024 tgcctttctaaacccttgtttcagccccctctatctc 31733060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 9 - 41
Target Start/End: Original strand, 35218230 - 35218262
Alignment:
Q  9 taaacccttgtttcagccccctctgtctctctc 41  Q
    |||||||||||||||||||||||| ||||||||    
T  35218230 taaacccttgtttcagccccctctatctctctc 35218262  T

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Target: chr4 (Bit Score: 85; Significance: 1e-40; HSPs: 52)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 1 - 105
Target Start/End: Original strand, 8631678 - 8631782
Alignment:
Q  1 tgcctttttaaacccttgtttcagccccctctgtctctctcaaagtttgctatgaaacaaggtctatatttatagtgaaagtaatcccttaaaaaactga 100  Q
    ||||||| |||||||||||||||||||||||| |||||||||||||||||| ||| |||| |||||||||||||||||||||||||||||||||||||||    
T  8631678 tgcctttctaaacccttgtttcagccccctctatctctctcaaagtttgctttgatacaaagtctatatttatagtgaaagtaatcccttaaaaaactga 8631777  T
Q  101 aacaa 105  Q
    |||||    
T  8631778 aacaa 8631782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 105
Target Start/End: Complemental strand, 40637148 - 40637048
Alignment:
Q  1 tgcctttttaaacccttgtttcagccccctctgtctctctcaaagtttgctatgaaacaaggtctatatttatagtgaaagtaatcccttaaaaaactga 100  Q
    ||||||| |||||||||||||||||||||||| ||||     ||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||    
T  40637148 tgcctttctaaacccttgtttcagccccctctatctcc----aagtttgctctgatacaaggtctatatttatagtgaaagtaatcccttaaaaaactga 40637053  T
Q  101 aacaa 105  Q
    |||||    
T  40637052 aacaa 40637048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 105
Target Start/End: Complemental strand, 6764913 - 6764813
Alignment:
Q  1 tgcctttttaaacccttgtttcagccccctctgtctctctcaaagtttgctatgaaacaaggtctatatttatagtgaaagtaatcccttaaaaaactga 100  Q
    ||||||| |||||||||||||||||||| ||| ||||    |||||||||| ||| |||||||||||||||||||||||||||||||||||||||| |||    
T  6764913 tgcctttctaaacccttgtttcagccccttctatctc----aaagtttgctctgatacaaggtctatatttatagtgaaagtaatcccttaaaaaaatga 6764818  T
Q  101 aacaa 105  Q
    |||||    
T  6764817 aacaa 6764813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 17662493 - 17662575
Alignment:
Q  1 tgcctttttaaacccttgtttcagccccctctgtctctctcaaagtttgctatgaaacaaggtctatatttatagtgaaagta 83  Q
    ||||||| |||||||||||||||||||||||| |||||||||||||||||| ||| |||||||||||||||||||| ||||||    
T  17662493 tgcctttctaaacccttgtttcagccccctctatctctctcaaagtttgctctgatacaaggtctatatttatagtaaaagta 17662575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 105
Target Start/End: Complemental strand, 47868475 - 47868375
Alignment:
Q  1 tgcctttttaaacccttgtttcagccccctctgtctctctcaaagtttgctatgaaacaaggtctatatttatagtgaaagtaatcccttaaaaaactga 100  Q
    ||||||| ||||||||| ||||||||| |||| ||||     ||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||    
T  47868475 tgcctttctaaacccttctttcagccctctctatctcc----aagtttgctctgatacaaggtctatatttatagtgaaagtaatcccttaaaaaactga 47868380  T
Q  101 aacaa 105  Q
    |||||    
T  47868379 aacaa 47868375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 2485131 - 2485223
Alignment:
Q  1 tgcctttttaaacccttgtttcagccccctctgtctctctcaaagtttgctatgaaacaaggtctatatttatagtgaaagtaatcccttaaaaaa 96  Q
    ||||||| ||||||||||||| ||||||||   |||  ||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||    
T  2485131 tgcctttctaaacccttgttttagccccct---tctagctcaaagtttgctctgatacaaggtctatatttatagtgaaagtaatcccttaaaaaa 2485223  T

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Target: chr4; HSP #7
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 5637724 - 5637806
Alignment:
Q  1 tgcctttttaaacccttgtttcagccccctctgtctctctcaaagtttgctatgaaacaaggtctatatttatagtgaaagta 83  Q
    ||||||| ||||| |||||||||||||||||| |||||||||||||||||| | | |||||||||||||||||||| ||||||    
T  5637724 tgcctttctaaactcttgtttcagccccctctatctctctcaaagtttgctcttatacaaggtctatatttatagtaaaagta 5637806  T

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Target: chr4; HSP #8
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 38409279 - 38409195
Alignment:
Q  1 tgcctttttaaacccttgtttcagccccctctgtctc--tctcaaagtttgctatgaaacaaggtctatatttatagtgaaagta 83  Q
    |||||||||||||| ||||||||||||||||| ||||  |||||||||||||| ||| |||||||||||||||||||| ||||||    
T  38409279 tgcctttttaaaccattgtttcagccccctctatctccctctcaaagtttgctctgatacaaggtctatatttatagtaaaagta 38409195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 24348292 - 24348210
Alignment:
Q  1 tgcctttttaaacccttgtttcagccccctctgtctctctcaaagttt-gctatgaaacaaggtctatatttatagtgaaagta 83  Q
    ||||||| |||||||||||||||||||||||| ||||||||||||||| ||| ||| |||||||||||||||||||| ||||||    
T  24348292 tgcctttctaaacccttgtttcagccccctctatctctctcaaagtttagct-tgatacaaggtctatatttatagtaaaagta 24348210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 95
Target Start/End: Complemental strand, 14633393 - 14633304
Alignment:
Q  1 tgcctttttaaacccttgtttcagccccctctgtctctctcaaagtttgctatgaaacaaggtctatatttatagtgaaagtaatcccttaaaaa 95  Q
    ||||||| |||||| ||||||||||||      ||| ||||||||||| || ||| |||||||||||||||||||||||||||||||||||||||    
T  14633393 tgcctttctaaacctttgtttcagccct-----tctatctcaaagtttactctgatacaaggtctatatttatagtgaaagtaatcccttaaaaa 14633304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 5198494 - 5198416
Alignment:
Q  1 tgcctttttaaacccttgtttcagccccctctgtctctctcaaagtttgctatgaaacaaggtctatatttatagtgaaagta 83  Q
    ||||||| |||||||||||||||||||||||| ||||    |||||||||| ||| |||||||||||||||||||| ||||||    
T  5198494 tgcctttctaaacccttgtttcagccccctctatctc----aaagtttgctctgatacaaggtctatatttatagtaaaagta 5198416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 24888870 - 24888792
Alignment:
Q  1 tgcctttttaaacccttgtttcagccccctctgtctctctcaaagtttgctatgaaacaaggtctatatttatagtgaaagta 83  Q
    ||||||| |||||||||||||||||||||||| |||||    ||||||||| ||| |||||||||||||||||||| ||||||    
T  24888870 tgcctttctaaacccttgtttcagccccctctatctct----aagtttgctctgatacaaggtctatatttatagtaaaagta 24888792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 9148327 - 9148247
Alignment:
Q  1 tgcctttttaaacccttgtttcagccccctctgtctctctcaaagtttgctatgaaacaaggtctatatttatagtgaaagta 83  Q
    ||||||| |||||||||| ||||||||||||| ||||||  |||||||||| ||| |||||| ||||||||||||| ||||||    
T  9148327 tgcctttctaaacccttgcttcagccccctctatctctc--aaagtttgctctgatacaaggcctatatttatagtaaaagta 9148247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 9 - 83
Target Start/End: Original strand, 14787698 - 14787770
Alignment:
Q  9 taaacccttgtttcagccccctctgtctctctcaaagtttgctatgaaacaaggtctatatttatagtgaaagta 83  Q
    |||||||||||||||||||||||| ||||  |||||||||  ||||| |||||||||||||||||||| ||||||    
T  14787698 taaacccttgtttcagccccctctatctc--tcaaagtttagtatgatacaaggtctatatttatagtaaaagta 14787770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 53405204 - 53405123
Alignment:
Q  1 tgcctttttaaacccttgtttcagccccctctgtctctctcaaagtttgctatgaaacaaggtctatatttatagtgaaagta 83  Q
    ||||||| |||||||||||||||| ||||||| |||||||||||||||    ||| |||||||||||||||||||| ||||||    
T  53405204 tgcctttctaaacccttgtttcag-cccctctatctctctcaaagtttagcctgatacaaggtctatatttatagtaaaagta 53405123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 47210999 - 47211083
Alignment:
Q  1 tgcctttttaaacccttgtttcagccccctctgtct--ctctcaaagtttgctatgaaacaaggtctatatttatagtgaaagta 83  Q
    ||||||| |||||||||||||||||||||||| |||  ||||||||||||    ||| |||||||||||||||||||| ||||||    
T  47210999 tgcctttctaaacccttgtttcagccccctctatctccctctcaaagtttagcctgatacaaggtctatatttatagtaaaagta 47211083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 11435029 - 11434952
Alignment:
Q  1 tgcctttttaaacccttgtttcagccccctctgtctctctcaaagtttgctatgaaacaaggtctatatttatagtgaaagt 82  Q
    ||||||| |||||||||||||||||||||||| ||||     ||||||||| ||| |||||||||||||||||||| |||||    
T  11435029 tgcctttctaaacccttgtttcagccccctctatctcc----aagtttgctctgatacaaggtctatatttatagtaaaagt 11434952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 36919844 - 36919924
Alignment:
Q  1 tgcctttttaaacccttgtttcagccccctctgtctctctcaaagtttgctatgaaacaaggtctatatttatagtgaaagta 83  Q
    ||||||| |||||||||||||||||||||| | ||| ||  ||||||| || ||| |||||||||||||||||||| ||||||    
T  36919844 tgcctttctaaacccttgtttcagccccctatatctatc--aaagtttactctgatacaaggtctatatttatagtaaaagta 36919924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 4 - 83
Target Start/End: Original strand, 619709 - 619784
Alignment:
Q  4 ctttttaaacccttgtttcagccccctctgtctctctcaaagtttgctatgaaacaaggtctatatttatagtgaaagta 83  Q
    |||| |||||||||||||||||||||||| ||||    ||||||| || ||| |||||||||||||||||||| ||||||    
T  619709 ctttataaacccttgtttcagccccctctatctc----aaagtttactctgatacaaggtctatatttatagtaaaagta 619784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 7941395 - 7941316
Alignment:
Q  1 tgcctttttaaacccttgtttcagccccctctgtctctctcaaagtttgctatgaaacaaggtctatatttatagtgaaagt 82  Q
    ||||||| |||||||||||||||||||||||| |||||| |   ||||||| ||| |||| ||||||||||||||| |||||    
T  7941395 tgcctttctaaacccttgtttcagccccctctatctctccc--ggtttgctctgatacaacgtctatatttatagtaaaagt 7941316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 4 - 83
Target Start/End: Original strand, 40091677 - 40091752
Alignment:
Q  4 ctttttaaacccttgtttcagccccctctgtctctctcaaagtttgctatgaaacaaggtctatatttatagtgaaagta 83  Q
    |||| |||||||||||||||||||||||| ||||    ||||||| || ||| |||||||||||||||||||| ||||||    
T  40091677 ctttctaaacccttgtttcagccccctctatctc----aaagtttactttgatacaaggtctatatttatagtaaaagta 40091752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 22044649 - 22044727
Alignment:
Q  1 tgcctttttaaacccttgtttcagccccctctgtctctctcaaagtttgctatgaaacaaggtctatatttatagtgaaagta 83  Q
    ||||||| |||||||||||||||||||||    ||| |||| ||||||||| ||| |||||| ||||||||||||| ||||||    
T  22044649 tgcctttctaaacccttgtttcagccccc----tctatctccaagtttgctctgatacaaggcctatatttatagtaaaagta 22044727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 9 - 83
Target Start/End: Original strand, 22801129 - 22801199
Alignment:
Q  9 taaacccttgtttcagccccctctgtctctctcaaagtttgctatgaaacaaggtctatatttatagtgaaagta 83  Q
    |||||||||||||||||||||||| ||||    ||||||| || ||| |||||||||||||||||||| ||||||    
T  22801129 taaacccttgtttcagccccctctatctc----aaagtttactctgatacaaggtctatatttatagtaaaagta 22801199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 9 - 83
Target Start/End: Original strand, 22803001 - 22803071
Alignment:
Q  9 taaacccttgtttcagccccctctgtctctctcaaagtttgctatgaaacaaggtctatatttatagtgaaagta 83  Q
    |||||||||||||||||||||||| ||||    ||||||| || ||| |||||||||||||||||||| ||||||    
T  22803001 taaacccttgtttcagccccctctatctc----aaagtttactctgatacaaggtctatatttatagtaaaagta 22803071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 9 - 82
Target Start/End: Original strand, 37089638 - 37089710
Alignment:
Q  9 taaacccttgtttcagccccctctgtctctctcaaagtttgctatgaaacaaggtctatatttatagtgaaagt 82  Q
    |||||||||||||||||||||||| |||||||| ||||||    ||| |||||||||||||||||||| |||||    
T  37089638 taaacccttgtttcagccccctctatctctctc-aagtttagcctgatacaaggtctatatttatagtaaaagt 37089710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 9 - 83
Target Start/End: Original strand, 44600105 - 44600175
Alignment:
Q  9 taaacccttgtttcagccccctctgtctctctcaaagtttgctatgaaacaaggtctatatttatagtgaaagta 83  Q
    |||||||||||||||||||||||| ||||    |||||||||| | | |||||||||||||||||||| ||||||    
T  44600105 taaacccttgtttcagccccctctatctc----aaagtttgctttaatacaaggtctatatttatagtaaaagta 44600175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 47274801 - 47274723
Alignment:
Q  1 tgcctttttaaacccttgtttcagccccctctgtctctctcaaagtttgctatgaaacaaggtctatatttatagtgaaagta 83  Q
    ||||||| |||||||||||||||||||||    ||| |||||||||||  | ||| |||||||||||||||||||| ||||||    
T  47274801 tgcctttctaaacccttgtttcagccccc----tctatctcaaagtttagtctgatacaaggtctatatttatagtaaaagta 47274723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 9 - 83
Target Start/End: Complemental strand, 48486385 - 48486315
Alignment:
Q  9 taaacccttgtttcagccccctctgtctctctcaaagtttgctatgaaacaaggtctatatttatagtgaaagta 83  Q
    |||||||||||||||||||||||| ||||    ||||||| || ||| |||||||||||||||||||| ||||||    
T  48486385 taaacccttgtttcagccccctctatctc----aaagtttactctgatacaaggtctatatttatagtaaaagta 48486315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 51015320 - 51015242
Alignment:
Q  1 tgcctttttaaacccttgtttcagccccctctgtctctctcaaagtttgctatgaaacaaggtctatatttatagtgaaagta 83  Q
    ||||||| |||||||||||||||||||||    ||| |||| ||||||||| ||| |||| ||||||||||||||| ||||||    
T  51015320 tgcctttctaaacccttgtttcagccccc----tctatctccaagtttgctctgatacaaagtctatatttatagtaaaagta 51015242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 9 - 82
Target Start/End: Original strand, 9174413 - 9174482
Alignment:
Q  9 taaacccttgtttcagccccctctgtctctctcaaagtttgctatgaaacaaggtctatatttatagtgaaagt 82  Q
    |||||||||||||||||||||||| ||||     ||||||||| ||| |||||||||||||||||||| |||||    
T  9174413 taaacccttgtttcagccccctctatctcc----aagtttgctttgatacaaggtctatatttatagtaaaagt 9174482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 9 - 82
Target Start/End: Original strand, 16934410 - 16934479
Alignment:
Q  9 taaacccttgtttcagccccctctgtctctctcaaagtttgctatgaaacaaggtctatatttatagtgaaagt 82  Q
    ||||||||||| |||||||||||| ||||    |||||||||| ||| |||||||||||||||||||| |||||    
T  16934410 taaacccttgtatcagccccctctatctc----aaagtttgctttgatacaaggtctatatttatagtaaaagt 16934479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 18847227 - 18847150
Alignment:
Q  1 tgcctttttaaacccttgtttcagccccctctgtctctctcaaagtttgctatgaaacaaggtctatatttatagtgaaagt 82  Q
    ||||||| ||||||||||||||| |||||||| ||||    |||||||| | ||| |||||||||||||||||||| |||||    
T  18847227 tgcctttctaaacccttgtttcaaccccctctatctc----aaagtttgttttgatacaaggtctatatttatagtaaaagt 18847150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 14 - 76
Target Start/End: Complemental strand, 13544020 - 13543957
Alignment:
Q  14 ccttgtttcagccccctctgtctctctcaaagtttgc-tatgaaacaaggtctatatttatagt 76  Q
    ||||||||||||||||||| ||||||||||||||| | | ||| ||||| ||||||||||||||    
T  13544020 ccttgtttcagccccctctatctctctcaaagtttacatctgatacaagatctatatttatagt 13543957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 22132649 - 22132736
Alignment:
Q  1 tgcctttttaaacccttgtttcagcccc-----ctctgtctctctcaaagtttgctatgaaacaaggtctatatttatagtgaaagta 83  Q
    ||||||| ||||||||||||||||||||     |||| |||||||||||||||    ||| |||||||||||||||||||| ||||||    
T  22132649 tgcctttctaaacccttgtttcagcccctctatctctctctctctcaaagtttagcctgatacaaggtctatatttatagtaaaagta 22132736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 9 - 76
Target Start/End: Original strand, 9176741 - 9176804
Alignment:
Q  9 taaacccttgtttcagccccctctgtctctctcaaagtttgctatgaaacaaggtctatatttatagt 76  Q
    |||||||||||||||||||||||| ||||     ||||||||| ||| ||||||||||||||||||||    
T  9176741 taaacccttgtttcagccccctctatctcc----aagtttgctttgatacaaggtctatatttatagt 9176804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 16453383 - 16453345
Alignment:
Q  1 tgcctttttaaacccttgtttcagccccctctgtctctc 39  Q
    |||||||||||||||||||||||||||||||| ||||||    
T  16453383 tgcctttttaaacccttgtttcagccccctctatctctc 16453345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 11006496 - 11006577
Alignment:
Q  1 tgcctttttaaacccttgtttcagccccctctgtctctctcaaagtttgctatgaaacaaggtctatatttatagtgaaagt 82  Q
    ||||||| |||||||||||||||||||||||| ||||||||  |   |  | ||| |||||||||||||||||||| |||||    
T  11006496 tgcctttctaaacccttgtttcagccccctctatctctctctcaaaatagtctgatacaaggtctatatttatagtaaaagt 11006577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 18709422 - 18709508
Alignment:
Q  1 tgcctttttaaacccttgtttcagccccc----tctgtctctctcaaagtttgctatgaaacaaggtctatatttatagtgaaagta 83  Q
    ||||||| |||||||||||||||||||||    ||| |||||||||||||||    | | |||||||||||||||||||| ||||||    
T  18709422 tgcctttctaaacccttgtttcagccccctctatctctctctctcaaagtttagcctaatacaaggtctatatttatagtaaaagta 18709508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 22046944 - 22047022
Alignment:
Q  1 tgcctttttaaacccttgtttcagccccctctgtctctctcaaagtttgctatgaaacaaggtctatatttatagtgaaagta 83  Q
    ||||||| |||||||||||||||||||||    ||| |||| |||||||||  || |||||| ||||||||||||| ||||||    
T  22046944 tgcctttctaaacccttgtttcagccccc----tctatctccaagtttgctccgatacaaggcctatatttatagtaaaagta 22047022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 11008825 - 11008865
Alignment:
Q  1 tgcctttttaaacccttgtttcagccccctctgtctctctc 41  Q
    ||||||| |||||||||||||||||||||||| ||||||||    
T  11008825 tgcctttctaaacccttgtttcagccccctctatctctctc 11008865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 9 - 82
Target Start/End: Original strand, 16932056 - 16932125
Alignment:
Q  9 taaacccttgtttcagccccctctgtctctctcaaagtttgctatgaaacaaggtctatatttatagtgaaagt 82  Q
    ||||||||||| |||||||||||| ||||    |||||||||| ||| ||||||| |||||||||||| |||||    
T  16932056 taaacccttgtatcagccccctctatctc----aaagtttgctttgatacaaggtttatatttatagtaaaagt 16932125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 9 - 83
Target Start/End: Complemental strand, 25357709 - 25357633
Alignment:
Q  9 taaacccttgttt-cagcccc-ctctgtctctctcaaagtttgctatgaaacaaggtctatatttatagtgaaagta 83  Q
    ||||||||||||| ||||||| |||  |||||||||| |||| || ||| |||||||||||||||||||| ||||||    
T  25357709 taaacccttgttttcagcccctctcactctctctcaaggtttactttgatacaaggtctatatttatagtaaaagta 25357633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 55 - 105
Target Start/End: Complemental strand, 15312203 - 15312152
Alignment:
Q  55 aaacaaggtctatatttatagtg-aaagtaatcccttaaaaaactgaaacaa 105  Q
    ||||||||  ||||||||||||| ||||||| ||||||||||||||||||||    
T  15312203 aaacaaggcttatatttatagtggaaagtaaacccttaaaaaactgaaacaa 15312152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 36921753 - 36921832
Alignment:
Q  1 tgcctttttaaacccttgtttcagccccctctgtctctctcaaagtttgctatgaaacaaggtctatatttatagtgaaagta 83  Q
    ||||||| ||| ||||||||||| |||||||| ||||  ||||||||| || ||| ||||||||||||||||| || ||||||    
T  36921753 tgcctttctaagcccttgtttca-ccccctctatctc--tcaaagtttactctgatacaaggtctatatttattgtaaaagta 36921832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 36378366 - 36378287
Alignment:
Q  1 tgcctttttaaacccttgtttcagccccctctgtctctctcaaagtttgctatgaaacaaggtctatatttatagtgaaagtaa 84  Q
    ||||||| ||||||||||||||||||||    |||| |||||| ||||  | ||| |||| ||||||||||||||| |||||||    
T  36378366 tgcctttctaaacccttgtttcagcccc----gtctatctcaaggtttattctgatacaaagtctatatttatagtaaaagtaa 36378287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 65 - 105
Target Start/End: Original strand, 4556370 - 4556411
Alignment:
Q  65 tatatttatagtg-aaagtaatcccttaaaaaactgaaacaa 105  Q
    ||||||||||||| ||||||| ||||||||||||||||||||    
T  4556370 tatatttatagtggaaagtaaccccttaaaaaactgaaacaa 4556411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 65 - 105
Target Start/End: Complemental strand, 15831012 - 15830971
Alignment:
Q  65 tatatttatagtg-aaagtaatcccttaaaaaactgaaacaa 105  Q
    ||||||||||||| ||||||| ||||||||||||||||||||    
T  15831012 tatatttatagtggaaagtaaacccttaaaaaactgaaacaa 15830971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 65 - 105
Target Start/End: Complemental strand, 18586837 - 18586796
Alignment:
Q  65 tatatttatagtg-aaagtaatcccttaaaaaactgaaacaa 105  Q
    ||||||||||||| ||||||| ||||||||||||||||||||    
T  18586837 tatatttatagtggaaagtaaacccttaaaaaactgaaacaa 18586796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 65 - 105
Target Start/End: Complemental strand, 31300295 - 31300254
Alignment:
Q  65 tatatttatagtg-aaagtaatcccttaaaaaactgaaacaa 105  Q
    ||||||||||||| ||||||| ||||||||||||||||||||    
T  31300295 tatatttatagtggaaagtaaccccttaaaaaactgaaacaa 31300254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 24446838 - 24446874
Alignment:
Q  1 tgcctttttaaacccttgtttcagccccctctgtctc 37  Q
    ||||||| |||||||||||||||||||||||| ||||    
T  24446838 tgcctttctaaacccttgtttcagccccctctatctc 24446874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 31849858 - 31849894
Alignment:
Q  1 tgcctttttaaacccttgtttcagccccctctgtctc 37  Q
    ||||||| |||||||||||||||||||||||| ||||    
T  31849858 tgcctttctaaacccttgtttcagccccctctatctc 31849894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 37313325 - 37313361
Alignment:
Q  1 tgcctttttaaacccttgtttcagccccctctgtctc 37  Q
    ||||||| |||||||||||||||||||||||| ||||    
T  37313325 tgcctttctaaacccttgtttcagccccctctatctc 37313361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 72; Significance: 7e-33; HSPs: 55)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 1 - 105
Target Start/End: Original strand, 4308538 - 4308638
Alignment:
Q  1 tgcctttttaaacccttgtttcagccccctctgtctctctcaaagtttgctatgaaacaaggtctatatttatagtgaaagtaatcccttaaaaaactga 100  Q
    ||||||| |||||||||||||||||||||||| ||||    |||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||    
T  4308538 tgcctttctaaacccttgtttcagccccctctatctc----aaagtttgctctgatacaaggtctatatttatagtgaaagtaatcccttaaaaaactga 4308633  T
Q  101 aacaa 105  Q
    |||||    
T  4308634 aacaa 4308638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 105
Target Start/End: Original strand, 51727263 - 51727363
Alignment:
Q  1 tgcctttttaaacccttgtttcagccccctctgtctctctcaaagtttgctatgaaacaaggtctatatttatagtgaaagtaatcccttaaaaaactga 100  Q
    ||||||| |||||||||||||||||||||    | | |||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||    
T  51727263 tgcctttctaaacccttgtttcagccccc----tttatctcaaagtttgctctgatacaaggtctatatttatagtgaaagtaatcccttaaaaaactga 51727358  T
Q  101 aacaa 105  Q
    |||||    
T  51727359 aacaa 51727363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 1 - 103
Target Start/End: Original strand, 27101438 - 27101540
Alignment:
Q  1 tgcctttttaaacccttgtttcagccccctctgtctctctcaaagtttgctatgaaacaaggtctatatttatagtgaaagtaatcccttaaaaaactga 100  Q
    ||||||| |||||||||||||||||| ||||| ||||| ||  | |||||| ||| ||||||||||||||||||||||||||||||||||||||||||||    
T  27101438 tgcctttctaaacccttgtttcagcctcctctatctctatctcaatttgctctgatacaaggtctatatttatagtgaaagtaatcccttaaaaaactga 27101537  T
Q  101 aac 103  Q
    |||    
T  27101538 aac 27101540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 105
Target Start/End: Original strand, 35918206 - 35918306
Alignment:
Q  1 tgcctttttaaacccttgtttcagccccctctgtctctctcaaagtttgctatgaaacaaggtctatatttatagtgaaagtaatcccttaaaaaactga 100  Q
    ||||||| |||||||||||||||||||||||| ||||    ||| |||||||||| |||||||||||||||||||||||||||||||||| ||||||| |    
T  35918206 tgcctttctaaacccttgtttcagccccctctatctc----aaaatttgctatgatacaaggtctatatttatagtgaaagtaatccctttaaaaactaa 35918301  T
Q  101 aacaa 105  Q
    |||||    
T  35918302 aacaa 35918306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 105
Target Start/End: Complemental strand, 43226086 - 43225986
Alignment:
Q  1 tgcctttttaaacccttgtttcagccccctctgtctctctcaaagtttgctatgaaacaaggtctatatttatagtgaaagtaatcccttaaaaaactga 100  Q
    ||||||| |||||||||||||||||||||||| ||||     ||||||||| ||| |||| |||||||||||||||||||||||||||||||||||||||    
T  43226086 tgcctttctaaacccttgtttcagccccctctatctcc----aagtttgctctgatacaatgtctatatttatagtgaaagtaatcccttaaaaaactga 43225991  T
Q  101 aacaa 105  Q
    |||||    
T  43225990 aacaa 43225986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 105
Target Start/End: Complemental strand, 43228291 - 43228191
Alignment:
Q  1 tgcctttttaaacccttgtttcagccccctctgtctctctcaaagtttgctatgaaacaaggtctatatttatagtgaaagtaatcccttaaaaaactga 100  Q
    ||||||| ||||| |||||||||||||||||| ||||     ||||||||| ||| |||| |||||||||||||||||||||||||||||||||||||||    
T  43228291 tgcctttctaaactcttgtttcagccccctctatctcc----aagtttgctctgatacaatgtctatatttatagtgaaagtaatcccttaaaaaactga 43228196  T
Q  101 aacaa 105  Q
    |||||    
T  43228195 aacaa 43228191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 29 - 105
Target Start/End: Complemental strand, 29956640 - 29956564
Alignment:
Q  29 ctctgtctctctcaaagtttgctatgaaacaaggtctatatttatagtgaaagtaatcccttaaaaaactgaaacaa 105  Q
    |||| |||||||||||||||||| | | |||| ||||||||||||||||||||||||||||||||||||||||||||    
T  29956640 ctctctctctctcaaagtttgctctaatacaaagtctatatttatagtgaaagtaatcccttaaaaaactgaaacaa 29956564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 29 - 105
Target Start/End: Complemental strand, 30005795 - 30005719
Alignment:
Q  29 ctctgtctctctcaaagtttgctatgaaacaaggtctatatttatagtgaaagtaatcccttaaaaaactgaaacaa 105  Q
    |||| |||||||||||||||||| | | |||| ||||||||||||||||||||||||||||||||||||||||||||    
T  30005795 ctctctctctctcaaagtttgctctaatacaaagtctatatttatagtgaaagtaatcccttaaaaaactgaaacaa 30005719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 1 - 105
Target Start/End: Original strand, 9604864 - 9604969
Alignment:
Q  1 tgcctttttaaacccttgtttcagccccctctgtctctctc--aaagtttgctatgaaacaaggtctatatttatagtgaaagtaatcccttaaaaaact 98  Q
    ||||||| |||||| ||||||||||||||||| ||||||||  | ||||| || | | ||||||||||||||||||||||||||||||||||||||||||    
T  9604864 tgcctttctaaacc-ttgtttcagccccctctatctctctctcagagttttctctaatacaaggtctatatttatagtgaaagtaatcccttaaaaaact 9604962  T
Q  99 gaaacaa 105  Q
     ||||||    
T  9604963 aaaacaa 9604969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 38890040 - 38889962
Alignment:
Q  1 tgcctttttaaacccttgtttcagccccctctgtctctctcaaagtttgctatgaaacaaggtctatatttatagtgaaagt 82  Q
    ||||||| |||||||||||||||||||||||| ||||||||||||||||||||   |||||||||||||||||||| |||||    
T  38890040 tgcctttctaaacccttgtttcagccccctctatctctctcaaagtttgctat---acaaggtctatatttatagtaaaagt 38889962  T

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Target: chr3; HSP #11
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 43 - 105
Target Start/End: Original strand, 25690651 - 25690713
Alignment:
Q  43 aagtttgctatgaaacaaggtctatatttatagtgaaagtaatcccttaaaaaactgaaacaa 105  Q
    ||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  25690651 aagtttgctctgatacaaggtctatatttatagtgaaagtaatcccttaaaaaactgaaacaa 25690713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 28 - 105
Target Start/End: Original strand, 27101540 - 27101617
Alignment:
Q  28 cctctgtctctctcaaagtttgctatgaaacaaggtctatatttatagtgaaagtaatcccttaaaaaactgaaacaa 105  Q
    ||||| ||||||||  | |||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  27101540 cctctatctctctctcaatttgctctgatacaaggtctatatttatagtgaaagtaatcccttaaaaaactgaaacaa 27101617  T

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Target: chr3; HSP #13
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 10084646 - 10084726
Alignment:
Q  1 tgcctttttaaacccttgtttcagccccctctgtctctctcaaagtttgctatgaaacaaggtctatatttatagtgaaag 81  Q
    ||||||| |||||||||||| ||||||||||| ||||||||||||||||||  || |||||||||||||||||||| ||||    
T  10084646 tgcctttctaaacccttgttccagccccctctatctctctcaaagtttgctccgatacaaggtctatatttatagtaaaag 10084726  T

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Target: chr3; HSP #14
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 4104152 - 4104234
Alignment:
Q  1 tgcctttttaaacccttgtttcagccccctctgtctctctcaaagtttgctatgaaacaaggtctatatttatagtgaaagta 83  Q
    ||||||| |||||||||||||||||||||||| |||||||||||||||    ||| |||||||||||||||||||| ||||||    
T  4104152 tgcctttctaaacccttgtttcagccccctctatctctctcaaagtttagcctgatacaaggtctatatttatagtaaaagta 4104234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 6063703 - 6063782
Alignment:
Q  1 tgcctttttaaacccttgtttcagccccctctgtctctctcaaagtttgctatgaaacaaggtctatatttatagtgaaagt 82  Q
    ||||||| |||||||||||||||||||||||| ||||  |||||||||||| ||| |||||||||||||||||||| |||||    
T  6063703 tgcctttctaaacccttgtttcagccccctctatctc--tcaaagtttgctttgatacaaggtctatatttatagtaaaagt 6063782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 10191566 - 10191648
Alignment:
Q  1 tgcctttttaaacccttgtttcagccccctctgtctctctcaaagtttgctatgaaacaaggtctatatttatagtgaaagta 83  Q
    ||||||| |||||||||||| ||||||||| | ||||||||||||||||||  || |||||||||||||||||||| ||||||    
T  10191566 tgcctttctaaacccttgttccagccccctttatctctctcaaagtttgctccgatacaaggtctatatttatagtaaaagta 10191648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 42992286 - 42992204
Alignment:
Q  1 tgcctttttaaacccttgtttcagccccctctgtctctctcaaagtttgctatgaaacaaggtctatatttatagtgaaagta 83  Q
    |||||||||||||||||||||||||||||||| ||||||| |||||||   |||| ||||||| |||||||||||| ||||||    
T  42992286 tgcctttttaaacccttgtttcagccccctctatctctcttaaagtttagcatgatacaaggtatatatttatagtaaaagta 42992204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 455907 - 455825
Alignment:
Q  1 tgcctttttaaacccttgtttcagccccctctgtctctctcaaagtttgctatgaaacaaggtctatatttatagtgaaagta 83  Q
    ||||||| |||||||||||||||||||||||| |||||||||| ||||    ||| |||||||||||||||||||| ||||||    
T  455907 tgcctttctaaacccttgtttcagccccctctatctctctcaaggtttagcctgatacaaggtctatatttatagtaaaagta 455825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 458284 - 458202
Alignment:
Q  1 tgcctttttaaacccttgtttcagccccctctgtctctctcaaagtttgctatgaaacaaggtctatatttatagtgaaagta 83  Q
    ||||||| |||||||||||||||||||||||| |||||||||| ||||    ||| |||||||||||||||||||| ||||||    
T  458284 tgcctttctaaacccttgtttcagccccctctatctctctcaaggtttagcctgatacaaggtctatatttatagtaaaagta 458202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 11170404 - 11170327
Alignment:
Q  1 tgcctttttaaacccttgtttcagccccctctgtctctctcaaagtttgctatgaaacaaggtctatatttatagtgaaagt 82  Q
    ||||||| |||||||||||||||||||||||| ||||    |||||||||| ||| |||||||||||||||||||| |||||    
T  11170404 tgcctttctaaacccttgtttcagccccctctatctc----aaagtttgctctgatacaaggtctatatttatagtaaaagt 11170327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 9 - 82
Target Start/End: Complemental strand, 50493991 - 50493922
Alignment:
Q  9 taaacccttgtttcagccccctctgtctctctcaaagtttgctatgaaacaaggtctatatttatagtgaaagt 82  Q
    |||||||||||||||||||||||| ||||||    |||||||| ||| ||||||||||||||||||||||||||    
T  50493991 taaacccttgtttcagccccctctatctctc----agtttgctttgatacaaggtctatatttatagtgaaagt 50493922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 6066053 - 6066131
Alignment:
Q  1 tgcctttttaaacccttgtttcagccccctctgtctctctcaaagtttgctatgaaacaaggtctatatttatagtgaaagt 82  Q
    ||||||| |||||||||||||||||||||    ||| |||||||||||||| ||| |||||||||||||||||||| |||||    
T  6066053 tgcctttctaaacccttgtttcagcccccc---tctatctcaaagtttgctttgatacaaggtctatatttatagtaaaagt 6066131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 1321441 - 1321363
Alignment:
Q  1 tgcctttttaaacccttgtttcagccccctctgtctctctcaaagtttgctatgaaacaaggtctatatttatagtgaaagta 83  Q
    ||||||| |||||||||||||||||||||||| ||||    |||||||||| ||| |||| ||||||||||||||| ||||||    
T  1321441 tgcctttctaaacccttgtttcagccccctctatctc----aaagtttgctctgatacaaagtctatatttatagtaaaagta 1321363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 45882939 - 45882861
Alignment:
Q  1 tgcctttttaaacccttgtttcagccccctctgtctctctcaaagtttgctatgaaacaaggtctatatttatagtgaaagta 83  Q
    ||||||| |||||||||||||||||||||||| ||||    | ||||| |||||| |||||||||||||||||||| ||||||    
T  45882939 tgcctttctaaacccttgtttcagccccctctatctc----atagtttactatgatacaaggtctatatttatagtaaaagta 45882861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 3859528 - 3859451
Alignment:
Q  1 tgcctttttaaacccttgtttcagccccctctgtctctctcaaagtttgctatgaaacaaggtctatatttatagtgaaagt 82  Q
    ||||||| |||||||||||||||||||||||| ||||     ||||||||| ||| |||||||||||||||||||| |||||    
T  3859528 tgcctttctaaacccttgtttcagccccctctatctcc----aagtttgctctgatacaaggtctatatttatagtaaaagt 3859451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 5522872 - 5522949
Alignment:
Q  1 tgcctttttaaacccttgtttcagccccctctgtctctctcaaagtttgctatgaaacaaggtctatatttatagtgaaagt 82  Q
    ||||||| |||||||||||||||||||||    ||| |||| ||||||||| ||| |||||||||||||||||||| |||||    
T  5522872 tgcctttctaaacccttgtttcagccccc----tctatctccaagtttgctctgatacaaggtctatatttatagtaaaagt 5522949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 11163150 - 11163073
Alignment:
Q  1 tgcctttttaaacccttgtttcagccccctctgtctctctcaaagtttgctatgaaacaaggtctatatttatagtgaaagt 82  Q
    ||||||| |||||||||||||||||||||||| ||||    |||||||||| ||| ||||||||||||||||| || |||||    
T  11163150 tgcctttctaaacccttgtttcagccccctctatctc----aaagtttgctctgatacaaggtctatatttatcgtaaaagt 11163073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 9 - 82
Target Start/End: Original strand, 18097165 - 18097235
Alignment:
Q  9 taaacccttgtttcagccccctctgtctctctcaaagtttgctatgaaacaaggtctatatttatagtgaaagt 82  Q
    ||||||||||||| |||||||||| ||||||   |||||| |||||| |||||||||||||||||||| |||||    
T  18097165 taaacccttgtttgagccccctctatctctc---aagtttactatgatacaaggtctatatttatagtaaaagt 18097235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 4 - 83
Target Start/End: Complemental strand, 24979704 - 24979629
Alignment:
Q  4 ctttttaaacccttgtttcagccccctctgtctctctcaaagtttgctatgaaacaaggtctatatttatagtgaaagta 83  Q
    |||| |||||||||||||||||||||||| ||||    ||||||| || ||| ||||||| |||||||||||||||||||    
T  24979704 ctttctaaacccttgtttcagccccctctatctc----aaagtttactctgatacaaggtatatatttatagtgaaagta 24979629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 9 - 83
Target Start/End: Complemental strand, 746749 - 746673
Alignment:
Q  9 taaacccttgtttcagccccctc--tgtctctctcaaagtttgctatgaaacaaggtctatatttatagtgaaagta 83  Q
    |||||||||||||||||||||||  | |||||||||||||||    ||| |||||||||||||||||||| ||||||    
T  746749 taaacccttgtttcagccccctctatctctctctcaaagtttagcctgatacaaggtctatatttatagtaaaagta 746673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 29 - 82
Target Start/End: Original strand, 6719392 - 6719445
Alignment:
Q  29 ctctgtctctctcaaagtttgctatgaaacaaggtctatatttatagtgaaagt 82  Q
    |||| |||||||||||||||||| ||| |||||||||||||||||||| |||||    
T  6719392 ctctctctctctcaaagtttgctctgatacaaggtctatatttatagtaaaagt 6719445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 25533442 - 25533356
Alignment:
Q  1 tgcctttttaaacccttgtttcagccccctctgtctctctc----aaagtttgctatgaaacaaggtctatatttatagtgaaagta 83  Q
    ||||||| |||||||||||||||||||||||| ||||||||    |||||||    ||| |||||||||||||||||||| ||||||    
T  25533442 tgcctttctaaacccttgtttcagccccctctatctctctctctcaaagtttagcctgatacaaggtctatatttatagtaaaagta 25533356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 26720548 - 26720470
Alignment:
Q  1 tgcctttttaaacccttgtttcagccccctctgtctctctcaaagtttgctatgaaacaaggtctatatttatagtgaaagta 83  Q
    ||||||| ||||||||| |||||||||||||| ||||     ||||||||| ||| |||||||||||||||||||| ||||||    
T  26720548 tgcctttctaaacccttatttcagccccctctatctcc----aagtttgctctgatacaaggtctatatttatagtaaaagta 26720470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 47149152 - 47149241
Alignment:
Q  1 tgcctttttaaacccttgtttcagccccctctgtctctctcaaagtttgc-tatgaaacaaggtctatatttatagtgaaagtaatccct 89  Q
    ||||||| |||||||||||||||||||||||| |||| ||||| |  | | | ||| |||||||||||||||||||| |||| |||||||    
T  47149152 tgcctttctaaacccttgtttcagccccctctatctccctcaaggcctacatctgatacaaggtctatatttatagtaaaagcaatccct 47149241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 9 - 83
Target Start/End: Original strand, 1618920 - 1618993
Alignment:
Q  9 taaacccttgttt-cagccccctctgtctctctcaaagtttgctatgaaacaaggtctatatttatagtgaaagta 83  Q
    ||||||||||||| ||||||||||||||||||  || |||| |||||  |||||||||||||||||||| ||||||    
T  1618920 taaacccttgttttcagccccctctgtctctc--aaggtttactatggtacaaggtctatatttatagtcaaagta 1618993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 5191653 - 5191576
Alignment:
Q  1 tgcctttttaaacccttgtttcagccccctctgtctctctcaaagtttgctatgaaacaaggtctatatttatagtgaaagt 82  Q
    ||||||| |||||||||||||||||||||    ||| |||| |||||||||  || |||||||||||||||||||| |||||    
T  5191653 tgcctttctaaacccttgtttcagccccc----tctatctccaagtttgcttagatacaaggtctatatttatagtaaaagt 5191576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 22114562 - 22114639
Alignment:
Q  1 tgcctttttaaacccttgtttcagccccctctgtctctctcaaagtttgctatgaaacaaggtctatatttatagtgaaagt 82  Q
    ||||||| |||||||||||||||||||| ||| ||||     ||||||||| ||| |||||||||||||||||||| |||||    
T  22114562 tgcctttctaaacccttgtttcagccccttctatctcc----aagtttgctctgatacaaggtctatatttatagtaaaagt 22114639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 9 - 82
Target Start/End: Complemental strand, 35777413 - 35777344
Alignment:
Q  9 taaacccttgtttcagccccctctgtctctctcaaagtttgctatgaaacaaggtctatatttatagtgaaagt 82  Q
    |||||||||||||||||||||||| ||||    |||||||||| ||| |||| ||||||||||||||| |||||    
T  35777413 taaacccttgtttcagccccctctatctc----aaagtttgctttgatacaatgtctatatttatagtaaaagt 35777344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 38 - 82
Target Start/End: Original strand, 53896486 - 53896530
Alignment:
Q  38 tctcaaagtttgctatgaaacaaggtctatatttatagtgaaagt 82  Q
    |||||||||||||| ||| ||||||||||||||||||||||||||    
T  53896486 tctcaaagtttgctttgatacaaggtctatatttatagtgaaagt 53896530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 6561810 - 6561735
Alignment:
Q  1 tgcctttttaaacccttgtttcagccccctctgtctctctcaaagtttgctatgaaacaaggtctatatttatagtgaaa 80  Q
    ||||||| |||||||||||||||||||||    ||| |||||| |||| || ||| ||||||||||||||||||| ||||    
T  6561810 tgcctttctaaacccttgtttcagccccc----tctatctcaaggtttactctgatacaaggtctatatttatagagaaa 6561735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 9 - 83
Target Start/End: Complemental strand, 15780852 - 15780782
Alignment:
Q  9 taaacccttgtttcagccccctctgtctctctcaaagtttgctatgaaacaaggtctatatttatagtgaaagta 83  Q
    |||||||||||||||||||||||| ||||     |||||| || ||| |||||||||||||||||||| ||||||    
T  15780852 taaacccttgtttcagccccctctatctcc----aagtttactctgatacaaggtctatatttatagtaaaagta 15780782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 38 - 83
Target Start/End: Original strand, 48361960 - 48362005
Alignment:
Q  38 tctcaaagtttgctatgaaacaaggtctatatttatagtgaaagta 83  Q
    ||||||||||| |||||| |||||||||||||||||||| ||||||    
T  48361960 tctcaaagtttactatgatacaaggtctatatttatagtaaaagta 48362005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 42990304 - 42990264
Alignment:
Q  1 tgcctttttaaacccttgtttcagccccctctgtctctctc 41  Q
    ||||||| |||||||||||||||||||||||| ||||||||    
T  42990304 tgcctttctaaacccttgtttcagccccctctatctctctc 42990264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 9 - 70
Target Start/End: Original strand, 18099435 - 18099493
Alignment:
Q  9 taaacccttgtttcagccccctctgtctctctcaaagtttgctatgaaacaaggtctatatt 70  Q
    |||||||||||||||||||||||| ||||||   |||||| || ||| ||||||||||||||    
T  18099435 taaacccttgtttcagccccctctatctctc---aagtttactctgatacaaggtctatatt 18099493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 9 - 44
Target Start/End: Complemental strand, 38210362 - 38210327
Alignment:
Q  9 taaacccttgtttcagccccctctgtctctctcaaa 44  Q
    |||||||||||||||||||||||| |||||||||||    
T  38210362 taaacccttgtttcagccccctctatctctctcaaa 38210327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 65 - 105
Target Start/End: Complemental strand, 5858417 - 5858376
Alignment:
Q  65 tatatttatagtg-aaagtaatcccttaaaaaactgaaacaa 105  Q
    ||||||||||||| ||||||| ||||||||||||||||||||    
T  5858417 tatatttatagtggaaagtaaacccttaaaaaactgaaacaa 5858376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 65 - 105
Target Start/End: Original strand, 10595342 - 10595383
Alignment:
Q  65 tatatttatagtg-aaagtaatcccttaaaaaactgaaacaa 105  Q
    ||||||||||||| ||||||| ||||||||||||||||||||    
T  10595342 tatatttatagtggaaagtaaacccttaaaaaactgaaacaa 10595383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 32219095 - 32219017
Alignment:
Q  1 tgcctttttaaacccttgtttcagccccctctgtctctctcaaagtttgctatgaaacaaggtctatatttatagtgaaagta 83  Q
    ||||||| | |||||||||||||||||||||| ||||    |||||||  |  || |||||||||||||||||| ||||||||    
T  32219095 tgcctttctgaacccttgtttcagccccctctatctc----aaagtttagtcagatacaaggtctatatttatactgaaagta 32219017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 34 - 83
Target Start/End: Complemental strand, 42990253 - 42990204
Alignment:
Q  34 tctctctcaaagtttgctatgaaacaaggtctatatttatagtgaaagta 83  Q
    |||||||||||||||   |||| |||||||||||||||||||| ||||||    
T  42990253 tctctctcaaagtttagcatgatacaaggtctatatttatagtaaaagta 42990204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 65 - 105
Target Start/End: Original strand, 47878482 - 47878523
Alignment:
Q  65 tatatttatagtg-aaagtaatcccttaaaaaactgaaacaa 105  Q
    ||||||||||||| ||||||| ||||||||||||||||||||    
T  47878482 tatatttatagtggaaagtaaacccttaaaaaactgaaacaa 47878523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 65 - 105
Target Start/End: Complemental strand, 54188379 - 54188338
Alignment:
Q  65 tatatttatagtg-aaagtaatcccttaaaaaactgaaacaa 105  Q
    ||||||||||||| ||||||| ||||||||||||||||||||    
T  54188379 tatatttatagtggaaagtaaacccttaaaaaactgaaacaa 54188338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 1626940 - 1626976
Alignment:
Q  1 tgcctttttaaacccttgtttcagccccctctgtctc 37  Q
    ||||||| |||||||||||||||||||||||| ||||    
T  1626940 tgcctttctaaacccttgtttcagccccctctatctc 1626976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 28102259 - 28102295
Alignment:
Q  1 tgcctttttaaacccttgtttcagccccctctgtctc 37  Q
    ||||||| |||||||||||||||||||||||| ||||    
T  28102259 tgcctttctaaacccttgtttcagccccctctatctc 28102295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 28137552 - 28137588
Alignment:
Q  1 tgcctttttaaacccttgtttcagccccctctgtctc 37  Q
    ||||||| |||||||||||||||||||||||| ||||    
T  28137552 tgcctttctaaacccttgtttcagccccctctatctc 28137588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 43423720 - 43423756
Alignment:
Q  1 tgcctttttaaacccttgtttcagccccctctgtctc 37  Q
    ||||||| |||||||||||||||||||||||| ||||    
T  43423720 tgcctttctaaacccttgtttcagccccctctttctc 43423756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 68; Significance: 2e-30; HSPs: 33)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 105
Target Start/End: Original strand, 1230508 - 1230608
Alignment:
Q  1 tgcctttttaaacccttgtttcagccccctctgtctctctcaaagtttgctatgaaacaaggtctatatttatagtgaaagtaatcccttaaaaaactga 100  Q
    ||||||| ||||||||||||||| ||| |||| ||||    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  1230508 tgcctttctaaacccttgtttcaaccctctctatctc----aaagtttgctatgatacaaggtctatatttatagtgaaagtaatcccttaaaaaactga 1230603  T
Q  101 aacaa 105  Q
    |||||    
T  1230604 aacaa 1230608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 105
Target Start/End: Original strand, 28241580 - 28241681
Alignment:
Q  1 tgcctttttaaacccttgtttcagccccctctgtctctctcaaagtttgctatgaaacaaggtctatatttatagtgaaagtaatccctt-aaaaaactg 99  Q
    ||||||| |||||||||||||||||||||||| |||||    ||||||||| ||| |||||||||||||||||||||||||||||||||| |||||||||    
T  28241580 tgcctttctaaacccttgtttcagccccctctatctct----aagtttgctctgatacaaggtctatatttatagtgaaagtaatcccttaaaaaaactg 28241675  T
Q  100 aaacaa 105  Q
    ||||||    
T  28241676 aaacaa 28241681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 9 - 105
Target Start/End: Complemental strand, 26065033 - 26064936
Alignment:
Q  9 taaacccttgtttcagccccctctgtctctctcaaagtt-tgctatgaaacaaggtctatatttatagtgaaagtaatcccttaaaaaactgaaacaa 105  Q
    |||||||||||||||||||||||| |||||||| |||   | || ||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  26065033 taaacccttgtttcagccccctctatctctctccaagaaatactgtgatacaaggtctatatttatagtgaaagtaatcccttaaaaaactgaaacaa 26064936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 9 - 105
Target Start/End: Complemental strand, 26085002 - 26084905
Alignment:
Q  9 taaacccttgtttcagccccctctgtctctctcaaagtt-tgctatgaaacaaggtctatatttatagtgaaagtaatcccttaaaaaactgaaacaa 105  Q
    |||||||||||||||||||||||| |||||||| |||   | || ||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  26085002 taaacccttgtttcagccccctctatctctctccaagaaatactgtgatacaaggtctatatttatagtgaaagtaatcccttaaaaaactgaaacaa 26084905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 19704828 - 19704909
Alignment:
Q  1 tgcctttttaaacccttgtttcagccccctc--tgtctctctcaaagtttgctatgaaacaaggtctatatttatagtgaaa 80  Q
    ||||||| |||||||||||||||||||||||  | |||||||||||||||||| ||| ||||||||||||||||||||||||    
T  19704828 tgcctttctaaacccttgtttcagccccctccatctctctctcaaagtttgctctgatacaaggtctatatttatagtgaaa 19704909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 34 - 83
Target Start/End: Original strand, 26932858 - 26932907
Alignment:
Q  34 tctctctcaaagtttgctatgaaacaaggtctatatttatagtgaaagta 83  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26932858 tctctctcaaagtttgctatgaaacaaggtctatatttatagtgaaagta 26932907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 35 - 83
Target Start/End: Complemental strand, 18318051 - 18318003
Alignment:
Q  35 ctctctcaaagtttgctatgaaacaaggtctatatttatagtgaaagta 83  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||    
T  18318051 ctctctcaaagtttgctatgaaacaaggtctatatttatagtgaaagta 18318003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 2629144 - 2629227
Alignment:
Q  1 tgcctttttaaacccttgtttcagcccc-ctctgtctctctcaaagtttgctatgaaacaaggtctatatttatagtgaaagta 83  Q
    ||||||| |||||||||||||||||||| || | |||||||||||||||   |||| |||||||||||||||||||| ||||||    
T  2629144 tgcctttctaaacccttgtttcagcccctctatctctctctcaaagtttaacatgatacaaggtctatatttatagtaaaagta 2629227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 9 - 83
Target Start/End: Original strand, 12195782 - 12195852
Alignment:
Q  9 taaacccttgtttcagccccctctgtctctctcaaagtttgctatgaaacaaggtctatatttatagtgaaagta 83  Q
    |||||||||||||||||||||||| ||||    |||||||||| ||| |||||||||||||||||||| ||||||    
T  12195782 taaacccttgtttcagccccctctatctc----aaagtttgctttgatacaaggtctatatttatagtaaaagta 12195852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 4 - 83
Target Start/End: Complemental strand, 30967253 - 30967175
Alignment:
Q  4 ctttttaaacccttgtttcagccccctctgtctctctcaaagttt--gctatgaaacaaggtctatatttatagtgaaagta 83  Q
    |||| |||||||||||||||||||||||| |||||||||||||||   ||||   |||||||||||||||||||| ||||||    
T  30967253 ctttctaaacccttgtttcagccccctctatctctctcaaagtttagcctat---acaaggtctatatttatagtaaaagta 30967175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 20915615 - 20915694
Alignment:
Q  1 tgcctttttaaacccttgtttcagccccctctgtctctctcaaagtttgctatgaaacaaggtctatatttatagtgaaagt 82  Q
    ||||||| |||||||||||||||||||||||| ||||||||||  |||    ||| |||||||||||||||||||| |||||    
T  20915615 tgcctttctaaacccttgtttcagccccctctatctctctcaa--tttagcctgatacaaggtctatatttatagtaaaagt 20915694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 30034862 - 30034944
Alignment:
Q  1 tgcctttttaaacccttgtttcagccccctctgtctctctcaaagtttgctatgaaacaaggtctatatttatagtgaaagta 83  Q
    ||||||| ||||||||||||| ||| |||||| ||||||| |||||||    ||| |||||||||||||||||||| ||||||    
T  30034862 tgcctttctaaacccttgttttagctccctctatctctcttaaagtttagcctgatacaaggtctatatttatagtaaaagta 30034944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 14507434 - 14507512
Alignment:
Q  1 tgcctttttaaacccttgtttcagccccctctgtctctctcaaagtttgctatgaaacaaggtctatatttatagtgaaagta 83  Q
    ||||||| ||||||||||||| |||||||||| ||||    |||||||||| | | |||||||||||||||||||| ||||||    
T  14507434 tgcctttctaaacccttgttttagccccctctatctc----aaagtttgctctaatacaaggtctatatttatagtaaaagta 14507512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 14459024 - 14459093
Alignment:
Q  1 tgcctttttaaacccttgtttcagccccctctgtctctctcaaagtttgctatgaaacaaggtctatatttata 74  Q
    ||||||| ||||||||| |||||||||||||| ||||    |||||||||| ||| ||||||||||||||||||    
T  14459024 tgcctttctaaacccttatttcagccccctctatctc----aaagtttgctctgatacaaggtctatatttata 14459093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 15541399 - 15541476
Alignment:
Q  1 tgcctttttaaacccttgtttcagccccctctgtctctctcaaagtttgctatgaaacaaggtctatatttatagtgaaagt 82  Q
    ||||||| |||||||||||||||||||||    ||| |||||||||||  | ||| |||||||||||||||||||| |||||    
T  15541399 tgcctttctaaacccttgtttcagccccc----tctatctcaaagtttagtctgatacaaggtctatatttatagtaaaagt 15541476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 3 - 83
Target Start/End: Original strand, 15532942 - 15533018
Alignment:
Q  3 cctttttaaacccttgtttcagccccctctgtctctctcaaagtttgctatgaaacaaggtctatatttatagtgaaagta 83  Q
    ||||| |||||||||||||||||||||    ||| |||||||||||  | ||| |||||||||||||||||||| ||||||    
T  15532942 cctttctaaacccttgtttcagccccc----tctatctcaaagtttagtctgatacaaggtctatatttatagtaaaagta 15533018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 32280051 - 32279982
Alignment:
Q  1 tgcctttttaaacccttgtttcagccccctctgtctctctcaaagtttgctatgaaacaaggtctatatttatag 75  Q
    ||||||||||||||||||||||||||||     ||| |||| |||||| |||||| ||||||||||||| |||||    
T  32280051 tgcctttttaaacccttgtttcagcccc-----tctatctccaagtttactatgatacaaggtctatatatatag 32279982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 8995534 - 8995456
Alignment:
Q  1 tgcctttttaaacccttgtttcagccccctctgtctctctcaaagtttgctatgaaacaaggtctatatttatagtgaaagta 83  Q
    ||||||| ||||||||||||| |||||||||| ||||||    ||||| || ||| ||||| |||||||||||||| ||||||    
T  8995534 tgcctttctaaacccttgttttagccccctctatctctc----agtttactctgatacaagatctatatttatagtaaaagta 8995456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 9019981 - 9019903
Alignment:
Q  1 tgcctttttaaacccttgtttcagccccctctgtctctctcaaagtttgctatgaaacaaggtctatatttatagtgaaagta 83  Q
    ||||||| ||||||||||||| |||||||||| ||||||    ||||| || ||| ||||| |||||||||||||| ||||||    
T  9019981 tgcctttctaaacccttgttttagccccctctatctctc----agtttactctgatacaagatctatatttatagtaaaagta 9019903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 29 - 82
Target Start/End: Original strand, 29754979 - 29755032
Alignment:
Q  29 ctctgtctctctcaaagtttgctatgaaacaaggtctatatttatagtgaaagt 82  Q
    |||| ||||||||| |||||||| ||| |||||||||||||||||||| |||||    
T  29754979 ctctctctctctcagagtttgctttgatacaaggtctatatttatagtaaaagt 29755032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 4816490 - 4816530
Alignment:
Q  1 tgcctttttaaacccttgtttcagccccctctgtctctctc 41  Q
    ||||||| |||||||||||||||||||||||| ||||||||    
T  4816490 tgcctttctaaacccttgtttcagccccctctatctctctc 4816530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 11983288 - 11983365
Alignment:
Q  1 tgcctttttaaacccttgtttcagccccctctgtctctctcaaagtttgctatgaaacaaggtctatatttatagtgaaagt 82  Q
    ||||||| ||| || ||||||||||||||||| ||||     ||||||||| ||| |||||||||||||||||||| |||||    
T  11983288 tgcctttctaagcctttgtttcagccccctctatctcc----aagtttgctctgatacaaggtctatatttatagtaaaagt 11983365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 19227667 - 19227744
Alignment:
Q  1 tgcctttttaaacccttgtttcagccccctctgtctctctcaaagtttgctatgaaacaaggtctatatttatagtgaaagt 82  Q
    ||||||| ||||||||||||| |||||||    | | |||||||||||||| ||| ||||| |||||||||||||| |||||    
T  19227667 tgcctttctaaacccttgtttgagccccc----tttatctcaaagtttgctctgatacaagatctatatttatagtaaaagt 19227744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 38 - 82
Target Start/End: Original strand, 26066320 - 26066364
Alignment:
Q  38 tctcaaagtttgctatgaaacaaggtctatatttatagtgaaagt 82  Q
    |||||||||||||| ||| |||||||||||||||||||| |||||    
T  26066320 tctcaaagtttgctttgatacaaggtctatatttatagtaaaagt 26066364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 38 - 82
Target Start/End: Original strand, 26068591 - 26068635
Alignment:
Q  38 tctcaaagtttgctatgaaacaaggtctatatttatagtgaaagt 82  Q
    |||||||||||||| ||| |||||||||||||||||||| |||||    
T  26068591 tctcaaagtttgctttgatacaaggtctatatttatagtaaaagt 26068635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 1072136 - 1072214
Alignment:
Q  1 tgcctttttaaacccttgtttcagccccctctgtctctctcaaagtttgctatgaaacaaggtctatatttatagtgaaagta 83  Q
    ||||||| ||||||||||||||||    |||  ||| ||||||||||| || ||| |||| ||||||||||||||| ||||||    
T  1072136 tgcctttctaaacccttgtttcag----ctccttctatctcaaagtttactctgatacaatgtctatatttatagtaaaagta 1072214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 65 - 105
Target Start/End: Original strand, 17695162 - 17695203
Alignment:
Q  65 tatatttatagtg-aaagtaatcccttaaaaaactgaaacaa 105  Q
    ||||||||||||| ||||||| ||||||||||||||||||||    
T  17695162 tatatttatagtggaaagtaaacccttaaaaaactgaaacaa 17695203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 65 - 105
Target Start/End: Original strand, 25466210 - 25466251
Alignment:
Q  65 tatatttatagtg-aaagtaatcccttaaaaaactgaaacaa 105  Q
    ||||||||||||| ||||||| ||||||||||||||||||||    
T  25466210 tatatttatagtggaaagtaaacccttaaaaaactgaaacaa 25466251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 65 - 105
Target Start/End: Complemental strand, 25941516 - 25941475
Alignment:
Q  65 tatatttatagtg-aaagtaatcccttaaaaaactgaaacaa 105  Q
    ||||||||||||| ||||||| ||||||||||||||||||||    
T  25941516 tatatttatagtggaaagtaaacccttaaaaaactgaaacaa 25941475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 13057249 - 13057213
Alignment:
Q  1 tgcctttttaaacccttgtttcagccccctctgtctc 37  Q
    ||||||| |||||||||||||||||||||||| ||||    
T  13057249 tgcctttctaaacccttgtttcagccccctctatctc 13057213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 24338707 - 24338743
Alignment:
Q  1 tgcctttttaaacccttgtttcagccccctctgtctc 37  Q
    ||||||| |||||||||||||||||||||||| ||||    
T  24338707 tgcctttctaaacccttgtttcagccccctctatctc 24338743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 25477329 - 25477293
Alignment:
Q  1 tgcctttttaaacccttgtttcagccccctctgtctc 37  Q
    ||||||| |||||||||||||||||||||||| ||||    
T  25477329 tgcctttctaaacccttgtttcagccccctctatctc 25477293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 32447575 - 32447611
Alignment:
Q  1 tgcctttttaaacccttgtttcagccccctctgtctc 37  Q
    ||||||| |||||||||||||||||||||||| ||||    
T  32447575 tgcctttctaaacccttgtttcagccccctctatctc 32447611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0038 (Bit Score: 65; Significance: 1e-28; HSPs: 1)
Name: scaffold0038
Description:

Target: scaffold0038; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 105
Target Start/End: Original strand, 41742 - 41843
Alignment:
Q  1 tgcctttttaaacccttgtttcagccccctctgtctctctcaaagtttgctatgaaacaaggtctatatttatagtgaaagtaatccctt-aaaaaactg 99  Q
    ||||||| |||||||||||||||||||||||| |||||    ||||||||| ||| |||||||||||||||||||||||||||||||||| |||||||||    
T  41742 tgcctttctaaacccttgtttcagccccctctatctct----aagtttgctctgatacaaggtctatatttatagtgaaagtaatcccttaaaaaaactg 41837  T
Q  100 aaacaa 105  Q
    ||||||    
T  41838 aaacaa 41843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 65; Significance: 1e-28; HSPs: 34)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 29 - 105
Target Start/End: Original strand, 22684949 - 22685025
Alignment:
Q  29 ctctgtctctctcaaagtttgctatgaaacaaggtctatatttatagtgaaagtaatcccttaaaaaactgaaacaa 105  Q
    |||| |||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  22684949 ctctctctctctcaaagtttgctctgatacaaggtctatatttatagtgaaagtaatcccttaaaaaactgaaacaa 22685025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 9 - 83
Target Start/End: Complemental strand, 43530196 - 43530122
Alignment:
Q  9 taaacccttgtttcagccccctctgtctctctcaaagtttgctatgaaacaaggtctatatttatagtgaaagta 83  Q
    |||||||||||||||||||||||| |||||||||||||||||| ||| |||||||||||||||||||| ||||||    
T  43530196 taaacccttgtttcagccccctctatctctctcaaagtttgctctgatacaaggtctatatttatagtaaaagta 43530122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 32339385 - 32339303
Alignment:
Q  1 tgcctttttaaacccttgtttcagccccctctgtctctctcaaagtttgctatgaaacaaggtctatatttatagtgaaagta 83  Q
    ||||||| |||||||||||||||||||||||| |||||||||||||||    ||| |||||||||||||||||||| ||||||    
T  32339385 tgcctttctaaacccttgtttcagccccctctatctctctcaaagtttagcctgatacaaggtctatatttatagtaaaagta 32339303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 15809295 - 15809213
Alignment:
Q  1 tgcctttttaaacccttgtttcagccccctctgtctctctcaaagtttgctatgaaacaaggtctatatttatagtgaaagta 83  Q
    ||||||| |||||||||||||||||||||| | |||||||||||||||    ||| |||||||||||||||||||| ||||||    
T  15809295 tgcctttctaaacccttgtttcagccccctttatctctctcaaagtttagcctgatacaaggtctatatttatagtaaaagta 15809213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 14807827 - 14807749
Alignment:
Q  1 tgcctttttaaacccttgtttcagccccctctgtctctctcaaagtttgctatgaaacaaggtctatatttatagtgaaagta 83  Q
    ||||||| |||||||||||||||||||||||| ||||    |||||||||| ||| |||||||||||||||||||| ||||||    
T  14807827 tgcctttctaaacccttgtttcagccccctctatctc----aaagtttgctctgatacaaggtctatatttatagtaaaagta 14807749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 12517283 - 12517363
Alignment:
Q  1 tgcctttttaaacccttgtttcagccccctctgtctctctcaaagtttgctatgaaacaaggtctatatttatagtgaaagta 83  Q
    ||||||| |||||||||||||||||||||||  | |||||||||||||||| ||| ||||||| ||||| |||||| ||||||    
T  12517283 tgcctttctaaacccttgtttcagccccctc--tatctctcaaagtttgctctgatacaaggtatatatatatagtaaaagta 12517363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 9 - 80
Target Start/End: Complemental strand, 608802 - 608727
Alignment:
Q  9 taaacccttgtttcagccccctctgtctctctc----aaagtttgctatgaaacaaggtctatatttatagtgaaa 80  Q
    |||||||||||||||||||||||| ||||||||    |||||||||||||| | |||||||||||||| |||||||    
T  608802 taaacccttgtttcagccccctctatctctctctctcaaagtttgctatgatataaggtctatatttacagtgaaa 608727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 3886177 - 3886255
Alignment:
Q  1 tgcctttttaaacccttgtttcagccccctctgtctctctcaaagtttgctatgaaacaaggtctatatttatagtgaaagta 83  Q
    ||||||| |||||||||||||||||||||||| ||||    |||||||||| ||| |||| ||||||||||||||| ||||||    
T  3886177 tgcctttctaaacccttgtttcagccccctctatctc----aaagtttgctctgatacaaagtctatatttatagtaaaagta 3886255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 24873440 - 24873524
Alignment:
Q  1 tgcctttttaaacccttgtttcagccccctc--tgtctctctcaaagtttgctatgaaacaaggtctatatttatagtgaaagta 83  Q
    ||||||| |||||||||||||||||||||||  | |||||||||||||||    ||| |||||||||||||||||||| ||||||    
T  24873440 tgcctttctaaacccttgtttcagccccctctatctctctctcaaagtttagcctgatacaaggtctatatttatagtaaaagta 24873524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 44720919 - 44720842
Alignment:
Q  1 tgcctttttaaacccttgtttcagccccctctgtctctctcaaagtttgctatgaaacaaggtctatatttatagtgaaagt 82  Q
    ||||||| |||||||||||||||||||||||| ||||    |||||||||| ||| | |||||||||||||||||| |||||    
T  44720919 tgcctttctaaacccttgtttcagccccctctatctc----aaagtttgctttgatataaggtctatatttatagtaaaagt 44720842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 4 - 83
Target Start/End: Complemental strand, 3874083 - 3874004
Alignment:
Q  4 ctttttaaacccttgtttcagccccctctgtctctctcaaagtttgctatgaaacaaggtctatatttatagtgaaagta 83  Q
    |||| ||||||||||||||||||||| || |||||||||||||||    ||| |||| ||||||||||||||| ||||||    
T  3874083 ctttctaaacccttgtttcagcccccgctatctctctcaaagtttagcctgatacaaagtctatatttatagtaaaagta 3874004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 4424094 - 4424016
Alignment:
Q  1 tgcctttttaaacccttgtttcagccccctctgtctctctcaaagtttgctatgaaacaaggtctatatttatagtgaaagta 83  Q
    ||||||| |||| ||||||||||||||||||| ||||    |||||||||| ||| ||||||||| |||||||||| ||||||    
T  4424094 tgcctttctaaatccttgtttcagccccctctatctc----aaagtttgctctgatacaaggtctgtatttatagtaaaagta 4424016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 15072786 - 15072708
Alignment:
Q  1 tgcctttttaaacccttgtttcagccccctctgtctctctcaaagtttgctatgaaacaaggtctatatttatagtgaaagta 83  Q
    ||||||| |||||||||||||||||||||    ||| |||||||||||  | ||| |||||||||||||||||||| ||||||    
T  15072786 tgcctttctaaacccttgtttcagccccc----tctatctcaaagtttagtctgatacaaggtctatatttatagtaaaagta 15072708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 27827062 - 27826984
Alignment:
Q  1 tgcctttttaaacccttgtttcagccccctctgtctctctcaaagtttgctatgaaacaaggtctatatttatagtgaaagta 83  Q
    ||||||| |||||||||||||||||||||    ||| |||| ||||||||| ||| |||||| ||||||||||||| ||||||    
T  27827062 tgcctttctaaacccttgtttcagccccc----tctatctccaagtttgctctgatacaaggcctatatttatagtaaaagta 27826984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 27829373 - 27829295
Alignment:
Q  1 tgcctttttaaacccttgtttcagccccctctgtctctctcaaagtttgctatgaaacaaggtctatatttatagtgaaagta 83  Q
    ||||||| |||||||||||||||||||||    ||| |||| ||||||||| ||| |||||| ||||||||||||| ||||||    
T  27829373 tgcctttctaaacccttgtttcagccccc----tctatctccaagtttgctctgatacaaggcctatatttatagtaaaagta 27829295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 9 - 83
Target Start/End: Original strand, 28283486 - 28283562
Alignment:
Q  9 taaacccttgtttcagccccctc--tgtctctctcaaagtttgctatgaaacaaggtctatatttatagtgaaagta 83  Q
    |||||||||||||||||||||||  | |||||||||||||||    ||| |||||||||||||||||||| ||||||    
T  28283486 taaacccttgtttcagccccctctatctctctctcaaagtttagcctgatacaaggtctatatttatagtaaaagta 28283562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 65 - 105
Target Start/End: Original strand, 9021418 - 9021458
Alignment:
Q  65 tatatttatagtgaaagtaatcccttaaaaaactgaaacaa 105  Q
    |||||||||||||||||||| ||||||||||||||||||||    
T  9021418 tatatttatagtgaaagtaaacccttaaaaaactgaaacaa 9021458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 18810784 - 18810707
Alignment:
Q  1 tgcctttttaaacccttgtttcagccccctctgtctctctcaaagtttgctatgaaacaaggtctatatttatagtgaaagt 82  Q
    ||||||| |||||||||||||||||||||    ||| |||| ||||||||| ||| ||||| |||||||||||||| |||||    
T  18810784 tgcctttctaaacccttgtttcagccccc----tctatctccaagtttgctctgatacaagatctatatttatagtaaaagt 18810707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 26775277 - 26775198
Alignment:
Q  1 tgcctttttaaacccttgtttcagccccctctgtctctctcaaagtttgctatgaaacaaggtctatatttatagtgaaagtaa 84  Q
    ||||||| |||||||||||||||||||||    ||| |||||| ||||||| ||| |||| | ||||||||||||| |||||||    
T  26775277 tgcctttctaaacccttgtttcagccccc----tctatctcaaggtttgctctgatacaaagcctatatttatagtaaaagtaa 26775198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 38 - 83
Target Start/End: Original strand, 28251859 - 28251904
Alignment:
Q  38 tctcaaagtttgctatgaaacaaggtctatatttatagtgaaagta 83  Q
    ||||||||||| |||||| |||||||||||||||||||| ||||||    
T  28251859 tctcaaagtttactatgatacaaggtctatatttatagtaaaagta 28251904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 18812969 - 18812892
Alignment:
Q  1 tgcctttttaaacccttgtttcagccccctctgtctctctcaaagtttgctatgaaacaaggtctatatttatagtgaaagt 82  Q
    ||||||| |||||||||||||||||| ||||| ||||     ||||||||| ||| ||||| |||||||||||||| |||||    
T  18812969 tgcctttctaaacccttgtttcagcctcctctatctcc----aagtttgctctgatacaagatctatatttatagtaaaagt 18812892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 38 - 83
Target Start/End: Original strand, 2468390 - 2468435
Alignment:
Q  38 tctcaaagtttgctatgaaacaaggtctatatttatagtgaaagta 83  Q
    ||||||||||| || ||| |||||||||||||||||||| ||||||    
T  2468390 tctcaaagtttactttgatacaaggtctatatttatagtaaaagta 2468435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 13858743 - 13858821
Alignment:
Q  1 tgcctttttaaacccttgtttcagccccctctgtctctctcaaagtttgctatgaaacaaggtctatatttatagtgaaagta 83  Q
    ||||||| ||||||||||||||| |||||    ||| |||||| |||| || ||| |||| ||||||||||||||| ||||||    
T  13858743 tgcctttctaaacccttgtttcatccccc----tctatctcaaggtttactctgatacaaagtctatatttatagtaaaagta 13858821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 14419450 - 14419528
Alignment:
Q  1 tgcctttttaaacccttgtttcagccccctctgtctctctcaaagtttgctatgaaacaaggtctatatttatagtgaaagta 83  Q
    ||||||| |||||||||||||||||||||||| ||||    || |||| |  ||| |||| ||||||||||||||| ||||||    
T  14419450 tgcctttctaaacccttgtttcagccccctctatctc----aaggtttacactgatacaatgtctatatttatagtaaaagta 14419528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 65 - 105
Target Start/End: Complemental strand, 21033741 - 21033700
Alignment:
Q  65 tatatttatagtg-aaagtaatcccttaaaaaactgaaacaa 105  Q
    ||||||||||||| ||||||| ||||||||||||||||||||    
T  21033741 tatatttatagtggaaagtaaccccttaaaaaactgaaacaa 21033700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 65 - 105
Target Start/End: Original strand, 29555096 - 29555137
Alignment:
Q  65 tatatttatagtgaaa-gtaatcccttaaaaaactgaaacaa 105  Q
    |||||||||||||||| |||| ||||||||||||||||||||    
T  29555096 tatatttatagtgaaaagtaaacccttaaaaaactgaaacaa 29555137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 38 - 83
Target Start/End: Complemental strand, 31162256 - 31162211
Alignment:
Q  38 tctcaaagtttgctatgaaacaaggtctatatttatagtgaaagta 83  Q
    |||||| |||| |||||| |||||||||||||||||||| ||||||    
T  31162256 tctcaaggtttactatgatacaaggtctatatttatagtaaaagta 31162211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 5622997 - 5623033
Alignment:
Q  1 tgcctttttaaacccttgtttcagccccctctgtctc 37  Q
    ||||||| |||||||||||||||||||||||| ||||    
T  5622997 tgcctttctaaacccttgtttcagccccctctatctc 5623033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 25952597 - 25952561
Alignment:
Q  1 tgcctttttaaacccttgtttcagccccctctgtctc 37  Q
    ||||||| |||||||||||||||||||||||| ||||    
T  25952597 tgcctttctaaacccttgtttcagccccctctatctc 25952561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 27107156 - 27107192
Alignment:
Q  1 tgcctttttaaacccttgtttcagccccctctgtctc 37  Q
    ||||||| |||||||||||||||||||||||| ||||    
T  27107156 tgcctttctaaacccttgtttcagccccctctatctc 27107192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 33541647 - 33541683
Alignment:
Q  1 tgcctttttaaacccttgtttcagccccctctgtctc 37  Q
    ||||||| |||||||||||||||||||||||| ||||    
T  33541647 tgcctttctaaacccttgtttcagccccctctatctc 33541683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 35872637 - 35872673
Alignment:
Q  1 tgcctttttaaacccttgtttcagccccctctgtctc 37  Q
    ||||||| |||||||||||||||||||||||| ||||    
T  35872637 tgcctttctaaacccttgtttcagccccctctatctc 35872673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 37214469 - 37214505
Alignment:
Q  1 tgcctttttaaacccttgtttcagccccctctgtctc 37  Q
    ||||||| |||||||||||||||||||||||| ||||    
T  37214469 tgcctttctaaacccttgtttcagccccctctatctc 37214505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 9 - 41
Target Start/End: Complemental strand, 43082041 - 43082009
Alignment:
Q  9 taaacccttgtttcagccccctctgtctctctc 41  Q
    |||||||||||||||||||||||| ||||||||    
T  43082041 taaacccttgtttcagccccctctatctctctc 43082009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0511 (Bit Score: 62; Significance: 6e-27; HSPs: 1)
Name: scaffold0511
Description:

Target: scaffold0511; HSP #1
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 2071 - 1987
Alignment:
Q  1 tgcctttttaaacccttgtttcagccccctctgtct--ctctcaaagtttgctatgaaacaaggtctatatttatagtgaaagta 83  Q
    ||||||| |||||||||||||||||||||| | |||  |||||||||||||||||||||||||||||||||||||||||||||||    
T  2071 tgcctttctaaacccttgtttcagccccctatatctttctctcaaagtttgctatgaaacaaggtctatatttatagtgaaagta 1987  T

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Target: scaffold0552 (Bit Score: 60; Significance: 1e-25; HSPs: 1)
Name: scaffold0552
Description:

Target: scaffold0552; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 105
Target Start/End: Original strand, 1090 - 1190
Alignment:
Q  1 tgcctttttaaacccttgtttcagccccctctgtctctctcaaagtttgctatgaaacaaggtctatatttatagtgaaagtaatcccttaaaaaactga 100  Q
    ||||||| |||||||||||||||||||| ||| ||||    |||||||||| ||| |||||||||||||||||||||||||||||||||||| ||| |||    
T  1090 tgcctttctaaacccttgtttcagccccttctatctc----aaagtttgctctgatacaaggtctatatttatagtgaaagtaatcccttaacaaattga 1185  T
Q  101 aacaa 105  Q
    |||||    
T  1186 aacaa 1190  T

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Target: chr1 (Bit Score: 58; Significance: 2e-24; HSPs: 45)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 9 - 82
Target Start/End: Complemental strand, 47177374 - 47177301
Alignment:
Q  9 taaacccttgtttcagccccctctgtctctctcaaagtttgctatgaaacaaggtctatatttatagtgaaagt 82  Q
    |||||||||||||||||||||||| |||||||||||||||||| ||| |||||||||||||||||||| |||||    
T  47177374 taaacccttgtttcagccccctctatctctctcaaagtttgctttgatacaaggtctatatttatagtaaaagt 47177301  T

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Target: chr1; HSP #2
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 9 - 82
Target Start/End: Complemental strand, 47179725 - 47179652
Alignment:
Q  9 taaacccttgtttcagccccctctgtctctctcaaagtttgctatgaaacaaggtctatatttatagtgaaagt 82  Q
    |||||||||||||||||||||||| |||||||||||||||||| ||| |||||||||||||||||||| |||||    
T  47179725 taaacccttgtttcagccccctctatctctctcaaagtttgctttgatacaaggtctatatttatagtaaaagt 47179652  T

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Target: chr1; HSP #3
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 21948448 - 21948523
Alignment:
Q  1 tgcctttttaaacccttgtttcagccccctctgtctctctcaaagtttgctatgaaacaaggtctatatttatagt 76  Q
    ||||||| |||||||||||||||||||||||| |||||||||||||||  ||||| ||||||||||||||||||||    
T  21948448 tgcctttctaaacccttgtttcagccccctctatctctctcaaagtttagtatgatacaaggtctatatttatagt 21948523  T

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Target: chr1; HSP #4
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 4 - 105
Target Start/End: Complemental strand, 2617533 - 2617438
Alignment:
Q  4 ctttttaaacccttgtttcagccccctctgtctctctcaaagtttgctatgaaacaaggtctatatttatagtgaaagtaatcccttaaaaaactgaaac 103  Q
    |||| |||||||||||||||||| ||||| ||||    |||||||||| ||| |||||||||||||||||||||||||  ||||||||||||||||||||    
T  2617533 ctttctaaacccttgtttcagcctcctctatctc----aaagtttgctctgatacaaggtctatatttatagtgaaag--atcccttaaaaaactgaaac 2617440  T

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Target: chr1; HSP #5
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 2510585 - 2510667
Alignment:
Q  1 tgcctttttaaacccttgtttcagccccctctgtctctctcaaagtttgctatgaaacaaggtctatatttatagtgaaagta 83  Q
    ||||||| |||||||||||||||||||||||| |||||||||||||||    ||| |||||||||||||||||||| ||||||    
T  2510585 tgcctttataaacccttgtttcagccccctctatctctctcaaagtttagcctgatacaaggtctatatttatagtaaaagta 2510667  T

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Target: chr1; HSP #6
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 9 - 89
Target Start/End: Original strand, 12302774 - 12302855
Alignment:
Q  9 taaacccttgtttcagccccctctgtctctctcaaagtttgc-tatgaaacaaggtctatatttatagtgaaagtaatccct 89  Q
    |||||||||||||||||||||||| |||||||||| |||| | | ||| |||||||||||||||||||| ||||||||||||    
T  12302774 taaacccttgtttcagccccctctatctctctcaaggtttacatctgatacaaggtctatatttatagtaaaagtaatccct 12302855  T

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Target: chr1; HSP #7
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 28842515 - 28842435
Alignment:
Q  1 tgcctttttaaacccttgtttcagccccctctgtctctctcaaagtttgctatgaaacaaggtctatatttatagtgaaagta 83  Q
    ||||||| |||||||||||||||||||||||| ||||||  |||||||||| ||| ||||||| |||||||||||| ||||||    
T  28842515 tgcctttctaaacccttgtttcagccccctctatctctc--aaagtttgctctgatacaaggtttatatttatagtaaaagta 28842435  T

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Target: chr1; HSP #8
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 27337199 - 27337281
Alignment:
Q  1 tgcctttttaaacccttgtttcagccccctctgtctctctcaaagtttgctatgaaacaaggtctatatttatagtgaaagta 83  Q
    ||||||| |||||||||||||||||||||||| |||||||||||||||    | | |||||||||||||||||||| ||||||    
T  27337199 tgcctttctaaacccttgtttcagccccctctatctctctcaaagtttagcctaatacaaggtctatatttatagtaaaagta 27337281  T

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Target: chr1; HSP #9
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 3 - 83
Target Start/End: Complemental strand, 28840698 - 28840620
Alignment:
Q  3 cctttttaaacccttgtttcagccccctctgtctctctcaaagtttgctatgaaacaaggtctatatttatagtgaaagta 83  Q
    ||||| ||||||||||||||| ||||||  || |||||||||||||||| ||| |||||||||||||||||||| ||||||    
T  28840698 cctttctaaacccttgtttcatccccct--gtatctctcaaagtttgctctgatacaaggtctatatttatagtaaaagta 28840620  T

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Target: chr1; HSP #10
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 57 - 105
Target Start/End: Original strand, 13449861 - 13449909
Alignment:
Q  57 acaaggtctatatttatagtgaaagtaatcccttaaaaaactgaaacaa 105  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||    
T  13449861 acaaggtctatatttatagtgaaagttatcccttaaaaaactgaaacaa 13449909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 11 - 83
Target Start/End: Complemental strand, 24325674 - 24325598
Alignment:
Q  11 aacccttgtttcagccccctctgtctctctc----aaagtttgctatgaaacaaggtctatatttatagtgaaagta 83  Q
    |||||||||||||||||||||| ||||||||    |||||||||| ||| |||||||||||||||||||| ||||||    
T  24325674 aacccttgtttcagccccctctatctctctctctcaaagtttgctctgatacaaggtctatatttatagtaaaagta 24325598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 27339391 - 27339473
Alignment:
Q  1 tgcctttttaaacccttgtttcagccccctctgtctctctcaaagtttgctatgaaacaaggtctatatttatagtgaaagta 83  Q
    ||||||| ||| |||||||||||||||||||| |||||||||||||||    | | |||||||||||||||||||| ||||||    
T  27339391 tgcctttctaagcccttgtttcagccccctctatctctctcaaagtttagcctaatacaaggtctatatttatagtaaaagta 27339473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 9463505 - 9463589
Alignment:
Q  1 tgcctttttaaacccttgtttcagccccctc--tgtctctctcaaagtttgctatgaaacaaggtctatatttatagtgaaagta 83  Q
    ||||||| |||||||||||||||||||||||  | |||||||||||||||    ||| |||||||||||||||||||| ||||||    
T  9463505 tgcctttctaaacccttgtttcagccccctctatctctctctcaaagtttagcctgatacaaggtctatatttatagtaaaagta 9463589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 20302479 - 20302410
Alignment:
Q  1 tgcctttttaaacccttgtttcagccccctctgtctctctcaaagtttgctatgaaacaaggtctatatttata 74  Q
    ||||||| |||||||||||||||||||||||| ||||    |||||||||| ||| ||||||||||||||||||    
T  20302479 tgcctttctaaacccttgtttcagccccctctatctc----aaagtttgctctgatacaaggtctatatttata 20302410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 51750059 - 51749982
Alignment:
Q  1 tgcctttttaaacccttgtttcagccccctctgtctctctcaaagtttgctatgaaacaaggtctatatttatagtgaaagt 82  Q
    ||||||| |||||||||||||||||||||||| ||||     ||||||||| ||| |||||||||||||||||||| |||||    
T  51750059 tgcctttctaaacccttgtttcagccccctctatctcc----aagtttgctctgatacaaggtctatatttatagtaaaagt 51749982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 4 - 83
Target Start/End: Original strand, 9459681 - 9459762
Alignment:
Q  4 ctttttaaacccttgtttcagccccctc--tgtctctctcaaagtttgctatgaaacaaggtctatatttatagtgaaagta 83  Q
    |||| |||||||||||||||||||||||  | |||||||||||||||    ||| |||||||||||||||||||| ||||||    
T  9459681 ctttctaaacccttgtttcagccccctctatctctctctcaaagtttagcctgatacaaggtctatatttatagtaaaagta 9459762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 31735782 - 31735864
Alignment:
Q  1 tgcctttttaaacccttgtttcagccccctctgtctctctcaaagtttgctatgaaacaaggtctatatttatagtgaaagta 83  Q
    ||||||| ||||||||||||| |||||||||| ||||  |||||||||    ||| |||||||||||||||||||| ||||||    
T  31735782 tgcctttctaaacccttgttttagccccctctatctcattcaaagtttagcctgatacaaggtctatatttatagtaaaagta 31735864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 13215101 - 13215023
Alignment:
Q  1 tgcctttttaaacccttgtttcagccccctctgtctctctcaaagtttgctatgaaacaaggtctatatttatagtgaaagta 83  Q
    ||||||| |||||||||||||||||||||    ||| ||||||| ||| || ||| |||||||||||||||||||| ||||||    
T  13215101 tgcctttctaaacccttgtttcagccccc----tctatctcaaaatttactctgatacaaggtctatatttatagtaaaagta 13215023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 14098231 - 14098309
Alignment:
Q  1 tgcctttttaaacccttgtttcagccccctctgtctctctcaaagtttgctatgaaacaaggtctatatttatagtgaaagta 83  Q
    |||||||||||||| ||||||||| ||||||| ||||    |||||||  | ||| |||||||||||||||||||||||||||    
T  14098231 tgcctttttaaaccattgtttcagtcccctctatctc----aaagtttagtttgatacaaggtctatatttatagtgaaagta 14098309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 15823566 - 15823488
Alignment:
Q  1 tgcctttttaaacccttgtttcagccccctctgtctctctcaaagtttgctatgaaacaaggtctatatttatagtgaaagta 83  Q
    ||||||| |||||||||||||||||||||| | |||||    |||||| || ||| |||||||||||||||||||| ||||||    
T  15823566 tgcctttctaaacccttgtttcagccccctttatctct----aagtttactttgatacaaggtctatatttatagtaaaagta 15823488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 12 - 82
Target Start/End: Complemental strand, 16231610 - 16231544
Alignment:
Q  12 acccttgtttcagccccctctgtctctctcaaagtttgctatgaaacaaggtctatatttatagtgaaagt 82  Q
    ||||||||||||||||||||| ||||    |||||||||| ||| |||||||||||||||||||| |||||    
T  16231610 acccttgtttcagccccctctatctc----aaagtttgctttgatacaaggtctatatttatagtaaaagt 16231544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 41646940 - 41646862
Alignment:
Q  1 tgcctttttaaacccttgtttcagccccctctgtctctctcaaagtttgctatgaaacaaggtctatatttatagtgaaagta 83  Q
    ||||||| ||||||||| |||||||||||||| ||||    ||||||| || ||| |||||||||||||||||||| ||||||    
T  41646940 tgcctttctaaacccttatttcagccccctctatctc----aaagtttactctgatacaaggtctatatttatagtaaaagta 41646862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 9 - 83
Target Start/End: Complemental strand, 47906282 - 47906206
Alignment:
Q  9 taaacccttgtttcagccccctc--tgtctctctcaaagtttgctatgaaacaaggtctatatttatagtgaaagta 83  Q
    |||||||||||||||||||||||  | |||||||||||||||    ||| |||||||||||||||||||| ||||||    
T  47906282 taaacccttgtttcagccccctctatctctctctcaaagtttagcctgatacaaggtctatatttatagtaaaagta 47906206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 6823035 - 6822958
Alignment:
Q  1 tgcctttttaaacccttgtttcagccccctctgtctctctcaaagtttgctatgaaacaaggtctatatttatagtgaaagt 82  Q
    ||||||| |||||||||||||||||||||    ||| |||||||||||||| ||| |||||||||||||  ||||| |||||    
T  6823035 tgcctttctaaacccttgtttcagccccc----tctatctcaaagtttgctctgatacaaggtctatataaatagtaaaagt 6822958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 13761857 - 13761780
Alignment:
Q  1 tgcctttttaaacccttgtttcagccccctctgtctctctcaaagtttgctatgaaacaaggtctatatttatagtgaaagt 82  Q
    ||||||| ||||||||||||||||||| |||| ||||     ||||||||| ||| |||||||||||||||||||| |||||    
T  13761857 tgcctttctaaacccttgtttcagccctctctatctcc----aagtttgctctgatacaaggtctatatttatagtaaaagt 13761780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 39932093 - 39932020
Alignment:
Q  1 tgcctttttaaacccttgtttcagccccctctgtctctctcaaagtttgctatgaaacaaggtctatatttatagt 76  Q
    ||||||| |||||||||||||||||||||||  | |||||||||||||  | | | ||||||||||||||||||||    
T  39932093 tgcctttctaaacccttgtttcagccccctc--tatctctcaaagttttgtctcatacaaggtctatatttatagt 39932020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 6823905 - 6823827
Alignment:
Q  1 tgcctttttaaacccttgtttcagccccctctgtctctctcaaagtttgctatgaaacaaggtctatatttatagtgaaagt 82  Q
    ||||||| |||||||||||||||||||||    ||| |||||||||||||| ||| |||||||||||||  ||||| |||||    
T  6823905 tgcctttctaaacccttgtttcagcccccc---tctatctcaaagtttgctctgatacaaggtctatataaatagtaaaagt 6823827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 29 - 76
Target Start/End: Original strand, 15295133 - 15295180
Alignment:
Q  29 ctctgtctctctcaaagtttgctatgaaacaaggtctatatttatagt 76  Q
    |||| |||||||||||||||||| ||| ||||||||||||||||||||    
T  15295133 ctctctctctctcaaagtttgctctgatacaaggtctatatttatagt 15295180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 67 - 105
Target Start/End: Complemental strand, 9521584 - 9521546
Alignment:
Q  67 tatttatagtgaaagtaatcccttaaaaaactgaaacaa 105  Q
    |||||||||||||||||| ||||||||||||||||||||    
T  9521584 tatttatagtgaaagtaaacccttaaaaaactgaaacaa 9521546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 4 - 83
Target Start/End: Original strand, 28207330 - 28207405
Alignment:
Q  4 ctttttaaacccttgtttcagccccctctgtctctctcaaagtttgctatgaaacaaggtctatatttatagtgaaagta 83  Q
    |||| |||||||||||||||||||||    ||| |||||||||||  | ||| |||||||||||||||||||| ||||||    
T  28207330 ctttctaaacccttgtttcagccccc----tctatctcaaagtttagtctgatacaaggtctatatttatagtaaaagta 28207405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 3 - 82
Target Start/End: Complemental strand, 51752383 - 51752308
Alignment:
Q  3 cctttttaaacccttgtttcagccccctctgtctctctcaaagtttgctatgaaacaaggtctatatttatagtgaaagt 82  Q
    ||||| ||||| |||||||||||||||||| ||||     ||||||||| ||| |||||||||||||||||||| |||||    
T  51752383 cctttctaaactcttgtttcagccccctctatctcc----aagtttgctctgatacaaggtctatatttatagtaaaagt 51752308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 9 - 75
Target Start/End: Original strand, 10400097 - 10400159
Alignment:
Q  9 taaacccttgtttcagccccctctgtctctctcaaagtttgctatgaaacaaggtctatatttatag 75  Q
    |||||||||||||||||||||||| |||| |    |||||||| ||| |||||||||||||||||||    
T  10400097 taaacccttgtttcagccccctctatctccc----agtttgctctgatacaaggtctatatttatag 10400159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 38925739 - 38925817
Alignment:
Q  1 tgcctttttaaacccttgtttcagccccctctgtctctctcaaagtttgctatgaaacaaggtctatatttatagtgaaagta 83  Q
    ||||||| | ||| |||||||||||||||||| ||||    ||||||| || ||| |||||||||||||||||||| ||||||    
T  38925739 tgcctttctgaactcttgtttcagccccctctatctc----aaagtttactctgatacaaggtctatatttatagtaaaagta 38925817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 38 - 83
Target Start/End: Complemental strand, 39462506 - 39462461
Alignment:
Q  38 tctcaaagtttgctatgaaacaaggtctatatttatagtgaaagta 83  Q
    ||||||||||| || ||| |||||||||||||||||||||||||||    
T  39462506 tctcaaagtttactctgatacaaggtctatatttatagtgaaagta 39462461  T

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Target: chr1; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 9 - 82
Target Start/End: Complemental strand, 16226179 - 16226110
Alignment:
Q  9 taaacccttgtttcagccccctctgtctctctcaaagtttgctatgaaacaaggtctatatttatagtgaaagt 82  Q
    ||||||||||||| || ||||    ||| |||||||||||||| ||| |||||||||||||||||||| |||||    
T  16226179 taaacccttgttttagacccc----tctatctcaaagtttgctttgatacaaggtctatatttatagtaaaagt 16226110  T

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Target: chr1; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 10 - 83
Target Start/End: Complemental strand, 47451659 - 47451590
Alignment:
Q  10 aaacccttgtttcagccccctctgtctctctcaaagtttgctatgaaacaaggtctatatttatagtgaaagta 83  Q
    |||||||||||| |||||||||| ||||    ||||||| || ||| |||||||||||||||||||| ||||||    
T  47451659 aaacccttgtttaagccccctctatctc----aaagtttactctgatacaaggtctatatttatagtaaaagta 47451590  T

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Target: chr1; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 65 - 105
Target Start/End: Complemental strand, 9526337 - 9526296
Alignment:
Q  65 tatatttatagtg-aaagtaatcccttaaaaaactgaaacaa 105  Q
    ||||||||||||| ||||||| ||||||||||||||||||||    
T  9526337 tatatttatagtggaaagtaaacccttaaaaaactgaaacaa 9526296  T

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Target: chr1; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 9 - 83
Target Start/End: Original strand, 49495468 - 49495538
Alignment:
Q  9 taaacccttgtttcagccccctctgtctctctcaaagtttgctatgaaacaaggtctatatttatagtgaaagta 83  Q
    |||||||||||||||||||||    ||| |||||| |||| || ||| |||| ||||||||||||||| ||||||    
T  49495468 taaacccttgtttcagccccc----tctatctcaaggtttactctgatacaaagtctatatttatagtaaaagta 49495538  T

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Target: chr1; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 17318913 - 17318877
Alignment:
Q  1 tgcctttttaaacccttgtttcagccccctctgtctc 37  Q
    ||||||| |||||||||||||||||||||||| ||||    
T  17318913 tgcctttctaaacccttgtttcagccccctctatctc 17318877  T

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Target: chr1; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 18307129 - 18307093
Alignment:
Q  1 tgcctttttaaacccttgtttcagccccctctgtctc 37  Q
    ||||||| |||||||||||||||||||||||| ||||    
T  18307129 tgcctttctaaacccttgtttcagccccctctatctc 18307093  T

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Target: chr1; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 20291477 - 20291400
Alignment:
Q  1 tgcctttttaaacccttgtttcagccccctctgtctctctcaaagtttgctatgaaacaaggtctatatttatagtgaaagt 82  Q
    ||||||| ||||||||||||||| | |||||| ||||    ||| |||||| | | |||||||||||||||||||| |||||    
T  20291477 tgcctttctaaacccttgtttcatctccctctatctc----aaaatttgctctaatacaaggtctatatttatagtaaaagt 20291400  T

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Target: chr1; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 25127892 - 25127852
Alignment:
Q  1 tgcctttttaaacccttgtttcagccccctctgtctctctc 41  Q
    ||||||| |||||||||||||||| ||||||| ||||||||    
T  25127892 tgcctttctaaacccttgtttcaggcccctctatctctctc 25127852  T

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Target: chr1; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 25248775 - 25248811
Alignment:
Q  1 tgcctttttaaacccttgtttcagccccctctgtctc 37  Q
    ||||||| |||||||||||||||||||||||| ||||    
T  25248775 tgcctttctaaacccttgtttcagccccctctatctc 25248811  T

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Target: chr1; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 31423135 - 31423171
Alignment:
Q  1 tgcctttttaaacccttgtttcagccccctctgtctc 37  Q
    ||||||| |||||||||||||||||||||||| ||||    
T  31423135 tgcctttctaaacccttgtttcagccccctctatctc 31423171  T

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Target: chr1; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 57 - 105
Target Start/End: Complemental strand, 43104127 - 43104080
Alignment:
Q  57 acaaggtctatatttatagtgaaagtaatcccttaaaaaactgaaacaa 105  Q
    |||||||||||||||||||| ||||| |||||| ||||||||| |||||    
T  43104127 acaaggtctatatttatagtaaaagt-atccctcaaaaaactggaacaa 43104080  T

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Target: scaffold0025 (Bit Score: 55; Significance: 1e-22; HSPs: 2)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 69550 - 69632
Alignment:
Q  1 tgcctttttaaacccttgtttcagccccctctgtctctctcaaagtttgctatgaaacaaggtctatatttatagtgaaagta 83  Q
    ||||||| |||||||||||||||||||||||| |||||||||||||||||| ||| | ||||||||||||||| || ||||||    
T  69550 tgcctttctaaacccttgtttcagccccctctatctctctcaaagtttgctctgatataaggtctatatttattgtaaaagta 69632  T

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Target: scaffold0025; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 73282 - 73364
Alignment:
Q  1 tgcctttttaaacccttgtttcagccccctctgtctctctcaaagtttgctatgaaacaaggtctatatttatagtgaaagta 83  Q
    ||||||| |||||||||||||||||||||||| ||||||||||||||| || ||| ||| |||||||||||||||| ||||||    
T  73282 tgcctttctaaacccttgtttcagccccctctatctctctcaaagtttcctttgatacacggtctatatttatagtaaaagta 73364  T

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Target: scaffold0005 (Bit Score: 47; Significance: 6e-18; HSPs: 2)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 95
Target Start/End: Original strand, 183899 - 183988
Alignment:
Q  1 tgcctttttaaacccttgtttcagccccctctgtctctctcaaagtttgctatgaaacaaggtctatatttatagtgaaagtaatcccttaaaaa 95  Q
    ||||||| |||||| ||||||||||||      ||| ||||||||||| || ||| |||||||||||||||||||||||||||||||||||||||    
T  183899 tgcctttctaaacctttgtttcagccct-----tctatctcaaagtttactctgatacaaggtctatatttatagtgaaagtaatcccttaaaaa 183988  T

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Target: scaffold0005; HSP #2
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 9 - 83
Target Start/End: Complemental strand, 52032 - 51960
Alignment:
Q  9 taaacccttgtttcagccccctctgtctctctcaaagtttgctatgaaacaaggtctatatttatagtgaaagta 83  Q
    |||||||||||||||||||||||| ||||||  |||||||  ||||| |||||||||||||||||||| ||||||    
T  52032 taaacccttgtttcagccccctctatctctc--aaagtttagtatgatacaaggtctatatttatagtaaaagta 51960  T

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Target: scaffold0472 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0472
Description:

Target: scaffold0472; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 9 - 82
Target Start/End: Complemental strand, 6220 - 6151
Alignment:
Q  9 taaacccttgtttcagccccctctgtctctctcaaagtttgctatgaaacaaggtctatatttatagtgaaagt 82  Q
    |||||||||||||||||||||||| ||||    |||||||||| ||| |||||||||||||||||||| |||||    
T  6220 taaacccttgtttcagccccctctatctc----aaagtttgctttgatacaaggtctatatttatagtaaaagt 6151  T

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Target: scaffold0250 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0250
Description:

Target: scaffold0250; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 2909 - 2832
Alignment:
Q  1 tgcctttttaaacccttgtttcagccccctctgtctctctcaaagtttgctatgaaacaaggtctatatttatagtgaaagt 82  Q
    ||||||| |||||||||||||||||||||||| ||||    |||||||||| ||| ||||| |||||||||||||| |||||    
T  2909 tgcctttctaaacccttgtttcagccccctctatctc----aaagtttgctctgatacaagttctatatttatagtaaaagt 2832  T

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Target: scaffold0339 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0339
Description:

Target: scaffold0339; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 4026 - 3948
Alignment:
Q  1 tgcctttttaaacccttgtttcagccccctctgtctctctcaaagtttgctatgaaacaaggtctatatttatagtgaaagta 83  Q
    ||||||| |||||||||||||||||||||    ||| |||||||||||  | ||| |||||||||||||||||||| ||||||    
T  4026 tgcctttctaaacccttgtttcagccccc----tctatctcaaagtttagtctgatacaaggtctatatttatagtaaaagta 3948  T

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Target: scaffold0131 (Bit Score: 38; Significance: 0.000000000001; HSPs: 2)
Name: scaffold0131
Description:

Target: scaffold0131; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 15048 - 14970
Alignment:
Q  1 tgcctttttaaacccttgtttcagccccctctgtctctctcaaagtttgctatgaaacaaggtctatatttatagtgaaagta 83  Q
    ||||||| |||| | ||||||||||||||||| ||||    |||||||||| ||| |||||||||||||||||||| ||||||    
T  15048 tgcctttctaaatcattgtttcagccccctctatctc----aaagtttgctctgatacaaggtctatatttatagtaaaagta 14970  T

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Target: scaffold0131; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 69
Target Start/End: Original strand, 14644 - 14707
Alignment:
Q  4 ctttttaaacccttgtttcagccccctctgtctctctcaaagtttgctatgaaacaaggtctatat 69  Q
    |||| |||||| |||||||| |||||||| ||||  |||||||||||| | |||||||||||||||    
T  14644 ctttctaaaccattgtttcatccccctctatctc--tcaaagtttgctctaaaacaaggtctatat 14707  T

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Target: scaffold0068 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0068
Description:

Target: scaffold0068; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 29200 - 29160
Alignment:
Q  1 tgcctttttaaacccttgtttcagccccctctgtctctctc 41  Q
    |||||||||||||||||||||||||||||||| ||||||||    
T  29200 tgcctttttaaacccttgtttcagccccctctatctctctc 29160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0140 (Bit Score: 31; Significance: 0.00000002; HSPs: 2)
Name: scaffold0140
Description:

Target: scaffold0140; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 36 - 82
Target Start/End: Complemental strand, 22208 - 22162
Alignment:
Q  36 tctctcaaagtttgctatgaaacaaggtctatatttatagtgaaagt 82  Q
    |||||| ||||||||| ||| |||||||||||||||||||| |||||    
T  22208 tctctccaagtttgctttgatacaaggtctatatttatagtaaaagt 22162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0140; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 36 - 82
Target Start/End: Complemental strand, 24483 - 24437
Alignment:
Q  36 tctctcaaagtttgctatgaaacaaggtctatatttatagtgaaagt 82  Q
    |||||| ||||||||| ||| |||||||||||||||||||| |||||    
T  24483 tctctccaagtttgctttgatacaaggtctatatttatagtaaaagt 24437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0209 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0209
Description:

Target: scaffold0209; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 65 - 105
Target Start/End: Original strand, 17297 - 17338
Alignment:
Q  65 tatatttatagtg-aaagtaatcccttaaaaaactgaaacaa 105  Q
    ||||||||||||| ||||||| ||||||||||||||||||||    
T  17297 tatatttatagtggaaagtaaacccttaaaaaactgaaacaa 17338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 65 - 105
Target Start/End: Original strand, 188553 - 188594
Alignment:
Q  65 tatatttatagtg-aaagtaatcccttaaaaaactgaaacaa 105  Q
    ||||||||||||| ||||||| ||||||||||||||||||||    
T  188553 tatatttatagtggaaagtaaacccttaaaaaactgaaacaa 188594  T

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Target: scaffold0267 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0267
Description:

Target: scaffold0267; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 9 - 41
Target Start/End: Complemental strand, 62 - 30
Alignment:
Q  9 taaacccttgtttcagccccctctgtctctctc 41  Q
    |||||||||||||||||||||||| ||||||||    
T  62 taaacccttgtttcagccccctctatctctctc 30  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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