View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1596_high_127 (Length: 204)
Name: NF1596_high_127
Description: NF1596
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1596_high_127 |
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Alignment Details
Target: chr2 (Bit Score: 143; Significance: 3e-75; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 19 - 189
Target Start/End: Original strand, 16906601 - 16906771
Alignment:
| Q |
19 |
atttaactcaaatggtaaataagctcttatgatgaatcatttaagatgatccaagttcaaattatgaatagaacagttatttgatattaaatgactgaaa |
118 |
Q |
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| T |
16906601 |
atttaactcaagtggtaaataagctcttacgatgaatcatttaagaggatccaagttcaaattatgaatagaacaattatttgacattaaatgactgaaa |
16906700 |
T |
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| Q |
119 |
taaagttgtaaatgaacccctaagataaatcatttgagataatccatgttcgaattctgaatagaataatt |
189 |
Q |
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| T |
16906701 |
taaagttgtaaatgaacccctacgataaatcatttgagataatccatgttcgaattctggatagaataatt |
16906771 |
T |
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