View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1596_high_15 (Length: 505)
Name: NF1596_high_15
Description: NF1596
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1596_high_15 |
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Alignment Details
Target: chr2 (Bit Score: 458; Significance: 0; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 458; E-Value: 0
Query Start/End: Original strand, 10 - 490
Target Start/End: Original strand, 45317108 - 45317589
Alignment:
| Q |
10 |
attatactgcagggatattcacttgcaaaagattgattttgccaaatacctcagaaacagctgttgctcgtgggatgattgttattgctgaagatgataa |
109 |
Q |
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| T |
45317108 |
attattctgcagggatattcacttgcaaaagattgattttgccaaatacctcagaaacagctgttgctcgtgggatgattgttattgctgaagatgataa |
45317207 |
T |
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| Q |
110 |
tctgagaaaatggtacatacggatacaattaacacaaaatggacacttccttgaggtgtaatccaagcagtcacttcctaagttaaatatatattaatca |
209 |
Q |
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| T |
45317208 |
tctgagaaaatggtacatacggatacaattaacacaaaatggacacttccttgaggtgtaatccaagcagtcacttcctaagttaaatatatattaatca |
45317307 |
T |
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| Q |
210 |
atgatgtgatgttttttaagtacttcactcataatgtcttctatctaatagaaatatttatcggacacaaaatccgacatcaac-aaaccgtttccgact |
308 |
Q |
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| T |
45317308 |
atgatgtgatgttttttaagtacttcactcataatgtcttctatctaatagaaatatttattggacacaaaatccgacatcaacaaaaccgtttccgact |
45317407 |
T |
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| Q |
309 |
tttatattgttttttctcaaacctcgtttatgtgttatgatgtctggcttttgtatgtctaaataacacagacaccgctatatctaaatatagttcaata |
408 |
Q |
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| T |
45317408 |
tttatattgttttttctcaaacctcgtttatgtcttacgatgtctggcttttgtatgtctaaataacacagacaccgctatatctaaatatagttcaata |
45317507 |
T |
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| Q |
409 |
aaaggactgaatagtaaaaagataaattacttgccagaatcagaaactttaagcagaggtaccaagtaacagacacattact |
490 |
Q |
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| T |
45317508 |
aaaggactgaatagtaaaaagataaattacttgccagaatcagaaactttaagcagaggtaccaagtaacagacacattact |
45317589 |
T |
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