View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1596_high_84 (Length: 259)
Name: NF1596_high_84
Description: NF1596
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1596_high_84 |
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| [»] chr2 (1 HSPs) |
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Alignment Details
Target: chr2 (Bit Score: 220; Significance: 1e-121; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 220; E-Value: 1e-121
Query Start/End: Original strand, 1 - 259
Target Start/End: Complemental strand, 38892663 - 38892404
Alignment:
| Q |
1 |
tataagctaatatatttatccacacacgcgtgtaatgttaaactagcaatgcaaatgtagaacagagaagagagacaagtgaaaagtgagatttcaaatt |
100 |
Q |
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| T |
38892663 |
tataagctaatatatttatccacacacacgtgtaatgttaaactagcaatgcaaatgtagaacagagaagagagacaagtgaaaagtgagatttcaaatt |
38892564 |
T |
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| Q |
101 |
gttggatttaagtttgagtgattagttctacatcaattatgaatagacaaaacgttgaatatatatgagatgtgacatatataca-taatgttttaaggt |
199 |
Q |
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| T |
38892563 |
gttgggattaagtttgagtgattaattctacatcaattatgaatagacaaaacgttgaatatatatgagatgtgacatatacacattaatgttttaaggt |
38892464 |
T |
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| Q |
200 |
ttttagcgaagatatgatgtctccatcgcttataatcataggtaattggtttgttgttgc |
259 |
Q |
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||| ||||||||||||||||||||||||||||||||||||||||||||||| | |||||| |
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| T |
38892463 |
tttgagcgaagatatgatgtctccatcgcttataatcataggtaattggttcgctgttgc |
38892404 |
T |
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