View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1596_high_86 (Length: 255)
Name: NF1596_high_86
Description: NF1596
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1596_high_86 |
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Alignment Details
Target: chr1 (Bit Score: 219; Significance: 1e-120; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 219; E-Value: 1e-120
Query Start/End: Original strand, 5 - 239
Target Start/End: Original strand, 45861020 - 45861254
Alignment:
| Q |
5 |
gagcaacacagaactgcataatagacattttttctatcaaaacgagttatattaccaaaagctatacaaatatagagaagagtttgaaattacctcatct |
104 |
Q |
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| T |
45861020 |
gagcagcacggaactgcataatagacattttttctatcaaaacgagttctattaccaaaagctatacaaatatagagaagagtttgaaattacctcatct |
45861119 |
T |
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| Q |
105 |
ccaaaagggcggtcaatatttgaagatatctttgatgaaaaagcagccaggagtaatctcaatgctaaagcagtttgaccacctgatatttagatcataa |
204 |
Q |
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| T |
45861120 |
ccaaaagggcggtcaatatttgaagatatctttgatgaaaaagcagccaggagtaatctcaatgctaaagcagtttgaccacctgatatttagatcataa |
45861219 |
T |
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| Q |
205 |
gacaataaacatgtttctcttacagatattaaata |
239 |
Q |
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| T |
45861220 |
gacaataaacatgtttctcctacagatattaaata |
45861254 |
T |
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