View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1596_high_99 (Length: 247)

Name: NF1596_high_99
Description: NF1596
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1596_high_99
NF1596_high_99
[»] chr2 (37 HSPs)
chr2 (36-231)||(38838995-38839191)
chr2 (176-233)||(11931754-11931811)
chr2 (186-233)||(7799920-7799967)
chr2 (176-226)||(43444689-43444739)
chr2 (185-230)||(4835727-4835772)
chr2 (176-233)||(5405059-5405116)
chr2 (176-233)||(6223129-6223186)
chr2 (176-233)||(7608112-7608169)
chr2 (176-233)||(8042164-8042221)
chr2 (176-233)||(9172288-9172345)
chr2 (176-233)||(19141208-19141265)
chr2 (176-233)||(22839069-22839126)
chr2 (176-233)||(24252023-24252079)
chr2 (176-233)||(38292015-38292072)
chr2 (182-229)||(42133821-42133868)
chr2 (176-226)||(19262743-19262793)
chr2 (176-233)||(11841735-11841792)
chr2 (176-233)||(44365220-44365277)
chr2 (176-233)||(44644933-44644990)
chr2 (176-232)||(16865117-16865173)
chr2 (185-233)||(31610795-31610843)
chr2 (176-219)||(9006940-9006983)
chr2 (182-233)||(13125287-13125338)
chr2 (178-231)||(1381280-1381333)
chr2 (176-229)||(39358209-39358262)
chr2 (176-232)||(13117467-13117523)
chr2 (186-233)||(19165925-19165972)
chr2 (185-232)||(24093679-24093725)
chr2 (182-229)||(36072243-36072290)
chr2 (176-229)||(2183103-2183156)
chr2 (187-232)||(3013839-3013884)
chr2 (175-232)||(14802916-14802973)
chr2 (183-216)||(24607838-24607871)
chr2 (185-233)||(20387382-20387430)
chr2 (197-229)||(34248559-34248591)
chr2 (185-229)||(36177723-36177767)
chr2 (182-226)||(40618878-40618921)
[»] chr7 (48 HSPs)
chr7 (176-233)||(27045550-27045607)
chr7 (176-232)||(38767202-38767258)
chr7 (182-233)||(4131645-4131696)
chr7 (186-236)||(41898061-41898111)
chr7 (176-233)||(3785583-3785640)
chr7 (176-233)||(6766692-6766749)
chr7 (176-229)||(7169189-7169242)
chr7 (176-233)||(20885166-20885223)
chr7 (176-233)||(28061657-28061714)
chr7 (176-233)||(36623371-36623428)
chr7 (176-233)||(39130068-39130125)
chr7 (176-233)||(40090060-40090117)
chr7 (176-233)||(42890485-42890542)
chr7 (176-233)||(46103512-46103569)
chr7 (176-233)||(47156090-47156147)
chr7 (176-233)||(48602499-48602556)
chr7 (182-226)||(37467456-37467500)
chr7 (176-235)||(7457862-7457921)
chr7 (182-229)||(44594666-44594712)
chr7 (185-232)||(47525979-47526026)
chr7 (182-232)||(36515908-36515958)
chr7 (176-229)||(5529074-5529127)
chr7 (176-233)||(7438966-7439023)
chr7 (176-233)||(16778568-16778625)
chr7 (176-233)||(38851989-38852046)
chr7 (176-233)||(40256120-40256177)
chr7 (182-233)||(4048876-4048927)
chr7 (186-233)||(44732085-44732132)
chr7 (186-233)||(46479902-46479949)
chr7 (182-233)||(49101955-49102006)
chr7 (185-231)||(35570193-35570239)
chr7 (176-233)||(32431500-32431557)
chr7 (177-229)||(6174900-6174952)
chr7 (185-233)||(21379816-21379864)
chr7 (176-233)||(8683881-8683935)
chr7 (186-233)||(11502722-11502769)
chr7 (186-229)||(25923482-25923525)
chr7 (186-229)||(26161669-26161712)
chr7 (186-233)||(36585182-36585229)
chr7 (182-229)||(39278477-39278524)
chr7 (190-233)||(41134630-41134673)
chr7 (176-215)||(49110630-49110669)
chr7 (187-233)||(35117199-35117245)
chr7 (186-232)||(36341693-36341739)
chr7 (176-230)||(41088650-41088704)
chr7 (176-233)||(3851137-3851194)
chr7 (176-233)||(30342137-30342194)
chr7 (176-233)||(42877449-42877506)
[»] chr4 (54 HSPs)
chr4 (176-233)||(7614678-7614735)
chr4 (176-231)||(56297846-56297901)
chr4 (176-226)||(2571031-2571081)
chr4 (176-238)||(35381031-35381093)
chr4 (182-232)||(38721406-38721456)
chr4 (176-229)||(2760873-2760926)
chr4 (176-233)||(20875389-20875446)
chr4 (176-233)||(26125771-26125828)
chr4 (176-233)||(29830406-29830463)
chr4 (176-233)||(38416792-38416849)
chr4 (176-233)||(43967786-43967843)
chr4 (176-233)||(44232219-44232276)
chr4 (176-233)||(47386428-47386485)
chr4 (176-233)||(54330832-54330889)
chr4 (176-233)||(55209716-55209773)
chr4 (189-229)||(34316596-34316636)
chr4 (176-232)||(36523111-36523167)
chr4 (186-233)||(45291905-45291952)
chr4 (182-233)||(55091329-55091380)
chr4 (185-227)||(52227097-52227139)
chr4 (176-233)||(4467661-4467718)
chr4 (176-233)||(12240320-12240377)
chr4 (176-233)||(12625314-12625371)
chr4 (184-233)||(14144599-14144648)
chr4 (176-233)||(17610343-17610400)
chr4 (176-233)||(19903792-19903849)
chr4 (176-233)||(25296722-25296779)
chr4 (176-233)||(26170049-26170106)
chr4 (176-232)||(56080045-56080102)
chr4 (185-229)||(10550498-10550542)
chr4 (185-233)||(27344090-27344138)
chr4 (176-232)||(38716949-38717005)
chr4 (186-233)||(39307769-39307816)
chr4 (186-232)||(51355181-51355227)
chr4 (176-233)||(35686436-35686493)
chr4 (176-233)||(50205806-50205863)
chr4 (179-226)||(2068045-2068092)
chr4 (176-219)||(3037043-3037086)
chr4 (176-215)||(5119081-5119120)
chr4 (186-233)||(19433500-19433547)
chr4 (176-211)||(29051747-29051782)
chr4 (186-233)||(30446370-30446417)
chr4 (182-233)||(32871501-32871552)
chr4 (187-233)||(17446775-17446821)
chr4 (186-233)||(27407759-27407808)
chr4 (182-232)||(50181129-50181179)
chr4 (176-233)||(9029591-9029648)
chr4 (182-215)||(25633265-25633298)
chr4 (196-229)||(28494294-28494327)
chr4 (176-233)||(31010277-31010334)
chr4 (176-233)||(37767100-37767157)
chr4 (186-219)||(51456510-51456543)
chr4 (196-232)||(27755806-27755842)
chr4 (198-234)||(34652157-34652193)
[»] chr3 (40 HSPs)
chr3 (182-229)||(41252909-41252956)
chr3 (184-233)||(15332948-15332997)
chr3 (182-233)||(41751552-41751603)
chr3 (179-233)||(41943280-41943334)
chr3 (176-233)||(13499477-13499534)
chr3 (176-233)||(27334873-27334930)
chr3 (176-233)||(30213867-30213924)
chr3 (176-233)||(33415862-33415919)
chr3 (176-233)||(38137887-38137944)
chr3 (176-233)||(39866283-39866340)
chr3 (176-233)||(42490338-42490395)
chr3 (176-233)||(42761625-42761682)
chr3 (176-224)||(3017854-3017902)
chr3 (177-233)||(17643795-17643851)
chr3 (186-233)||(27010616-27010663)
chr3 (176-218)||(27813445-27813487)
chr3 (182-232)||(30057368-30057418)
chr3 (176-233)||(20765259-20765316)
chr3 (176-233)||(21797619-21797676)
chr3 (182-233)||(6910403-6910454)
chr3 (182-233)||(15568077-15568128)
chr3 (183-229)||(23940508-23940554)
chr3 (186-232)||(28389216-28389262)
chr3 (186-232)||(44856419-44856465)
chr3 (184-233)||(3020343-3020392)
chr3 (182-231)||(19327474-19327523)
chr3 (176-233)||(21005356-21005413)
chr3 (176-233)||(36227608-36227665)
chr3 (176-232)||(44561847-44561903)
chr3 (182-229)||(47164598-47164646)
chr3 (185-233)||(48334663-48334710)
chr3 (183-233)||(22786700-22786748)
chr3 (182-229)||(25527473-25527520)
chr3 (186-233)||(54507714-54507761)
chr3 (176-229)||(3430420-3430473)
chr3 (182-215)||(15664105-15664138)
chr3 (176-233)||(52167272-52167329)
chr3 (183-215)||(14412255-14412287)
chr3 (185-233)||(33803594-33803642)
chr3 (185-233)||(43181497-43181545)
[»] chr1 (38 HSPs)
chr1 (182-233)||(22575729-22575780)
chr1 (182-232)||(44647856-44647906)
chr1 (176-233)||(6402552-6402609)
chr1 (176-233)||(11641209-11641266)
chr1 (176-229)||(30385291-30385344)
chr1 (176-233)||(31444986-31445043)
chr1 (176-233)||(36757628-36757685)
chr1 (182-233)||(3485349-3485400)
chr1 (182-233)||(9342787-9342838)
chr1 (176-229)||(6766435-6766488)
chr1 (176-233)||(16120582-16120639)
chr1 (176-233)||(17306017-17306074)
chr1 (176-233)||(30003596-30003653)
chr1 (176-225)||(34634970-34635019)
chr1 (176-233)||(40771914-40771971)
chr1 (176-233)||(40977630-40977687)
chr1 (176-232)||(28030824-28030880)
chr1 (185-233)||(40800529-40800576)
chr1 (185-233)||(42735307-42735355)
chr1 (176-233)||(30701781-30701838)
chr1 (176-233)||(36399161-36399218)
chr1 (176-233)||(42788684-42788741)
chr1 (182-219)||(44644511-44644548)
chr1 (185-233)||(15382568-15382616)
chr1 (186-233)||(7568628-7568675)
chr1 (186-233)||(24321334-24321381)
chr1 (186-229)||(38153423-38153466)
chr1 (182-225)||(48375071-48375114)
chr1 (186-232)||(9881349-9881395)
chr1 (182-232)||(19711835-19711885)
chr1 (185-219)||(25695472-25695506)
chr1 (186-232)||(50972777-50972823)
chr1 (176-229)||(4302181-4302234)
chr1 (176-209)||(6406118-6406151)
chr1 (176-229)||(27292703-27292756)
chr1 (176-233)||(52024089-52024146)
chr1 (69-105)||(49662496-49662532)
chr1 (182-229)||(51021008-51021056)
[»] chr8 (34 HSPs)
chr8 (182-232)||(18090397-18090447)
chr8 (175-233)||(18035162-18035220)
chr8 (183-233)||(40716665-40716715)
chr8 (176-233)||(616846-616903)
chr8 (176-233)||(623239-623296)
chr8 (176-233)||(14237343-14237400)
chr8 (176-233)||(18044488-18044545)
chr8 (176-233)||(32998513-32998570)
chr8 (176-233)||(33700215-33700272)
chr8 (176-233)||(40494447-40494504)
chr8 (176-233)||(41263873-41263930)
chr8 (182-233)||(132086-132137)
chr8 (176-233)||(38957233-38957290)
chr8 (176-233)||(42587390-42587447)
chr8 (182-233)||(9632224-9632275)
chr8 (186-233)||(33905470-33905517)
chr8 (186-233)||(36642000-36642047)
chr8 (182-233)||(40204864-40204915)
chr8 (176-230)||(3100640-3100694)
chr8 (176-226)||(5878379-5878429)
chr8 (176-233)||(2766190-2766247)
chr8 (176-233)||(3370398-3370455)
chr8 (194-231)||(7430914-7430951)
chr8 (176-229)||(11162405-11162457)
chr8 (197-233)||(32855604-32855640)
chr8 (176-231)||(4270236-4270291)
chr8 (182-229)||(5173320-5173367)
chr8 (186-233)||(38497145-38497192)
chr8 (176-226)||(10982639-10982689)
chr8 (176-233)||(18020929-18020989)
chr8 (184-233)||(8394417-8394466)
chr8 (176-233)||(13216863-13216920)
chr8 (176-233)||(35403579-35403636)
chr8 (190-218)||(28724009-28724037)
[»] scaffold0225 (1 HSPs)
scaffold0225 (184-233)||(8975-9024)
[»] scaffold0029 (1 HSPs)
scaffold0029 (184-233)||(138172-138221)
[»] chr5 (35 HSPs)
chr5 (176-233)||(24992280-24992337)
chr5 (182-230)||(32017282-32017330)
chr5 (182-233)||(18998756-18998807)
chr5 (176-233)||(978140-978197)
chr5 (185-230)||(3422355-3422400)
chr5 (176-233)||(9502769-9502826)
chr5 (176-233)||(11761129-11761186)
chr5 (176-233)||(14634299-14634356)
chr5 (176-233)||(33387283-33387340)
chr5 (185-229)||(17476949-17476993)
chr5 (185-233)||(24916388-24916436)
chr5 (182-226)||(27579579-27579623)
chr5 (185-233)||(32400399-32400447)
chr5 (182-233)||(12456782-12456833)
chr5 (182-233)||(26387021-26387072)
chr5 (187-233)||(30355016-30355062)
chr5 (176-233)||(3472419-3472476)
chr5 (176-233)||(8086172-8086229)
chr5 (176-233)||(33587611-33587668)
chr5 (185-233)||(12359963-12360011)
chr5 (186-233)||(9050718-9050765)
chr5 (186-233)||(18094223-18094270)
chr5 (194-232)||(2825264-2825302)
chr5 (176-229)||(5947697-5947750)
chr5 (176-229)||(38916396-38916449)
chr5 (182-222)||(4671278-4671318)
chr5 (182-233)||(6996049-6996100)
chr5 (186-233)||(12007774-12007821)
chr5 (176-215)||(31197850-31197889)
chr5 (186-233)||(40156271-40156318)
chr5 (176-233)||(7224228-7224285)
chr5 (183-232)||(10822238-10822287)
chr5 (176-229)||(11251177-11251230)
chr5 (182-211)||(37495679-37495708)
chr5 (175-231)||(29492388-29492444)
[»] scaffold0009 (2 HSPs)
scaffold0009 (185-233)||(217017-217065)
scaffold0009 (182-233)||(53562-53613)
[»] scaffold0595 (1 HSPs)
scaffold0595 (176-226)||(4011-4061)
[»] scaffold0262 (1 HSPs)
scaffold0262 (184-233)||(22851-22900)
[»] scaffold0099 (1 HSPs)
scaffold0099 (176-229)||(28798-28851)
[»] chr6 (35 HSPs)
chr6 (176-233)||(6563289-6563346)
chr6 (176-233)||(15337551-15337608)
chr6 (176-233)||(18668830-18668887)
chr6 (184-233)||(23158051-23158100)
chr6 (176-233)||(24624083-24624140)
chr6 (176-229)||(31869771-31869824)
chr6 (176-233)||(32414821-32414878)
chr6 (185-233)||(5495321-5495369)
chr6 (177-229)||(8101664-8101716)
chr6 (186-229)||(3623856-3623899)
chr6 (186-233)||(19088100-19088147)
chr6 (176-233)||(2360053-2360110)
chr6 (176-233)||(4147994-4148051)
chr6 (176-229)||(10298719-10298772)
chr6 (176-233)||(17213926-17213983)
chr6 (176-233)||(22054835-22054892)
chr6 (176-233)||(28477816-28477873)
chr6 (176-231)||(1260493-1260548)
chr6 (186-233)||(15383072-15383119)
chr6 (182-233)||(24955538-24955589)
chr6 (186-233)||(29790279-29790326)
chr6 (190-232)||(17155226-17155268)
chr6 (176-233)||(1040887-1040944)
chr6 (185-230)||(7049007-7049052)
chr6 (176-233)||(17257793-17257850)
chr6 (176-233)||(20226440-20226497)
chr6 (176-233)||(22120424-22120481)
chr6 (176-233)||(32671879-32671936)
chr6 (176-232)||(4440913-4440969)
chr6 (176-211)||(19240756-19240791)
chr6 (176-230)||(29693946-29694000)
chr6 (183-219)||(14214069-14214105)
chr6 (185-233)||(20437155-20437203)
chr6 (187-223)||(21913653-21913689)
chr6 (185-233)||(24321207-24321255)
[»] scaffold0003 (1 HSPs)
scaffold0003 (175-233)||(161979-162037)
[»] scaffold0056 (1 HSPs)
scaffold0056 (186-233)||(71033-71080)
[»] scaffold0295 (1 HSPs)
scaffold0295 (176-233)||(13859-13916)
[»] scaffold0022 (1 HSPs)
scaffold0022 (176-233)||(100789-100846)
[»] scaffold0018 (1 HSPs)
scaffold0018 (176-233)||(67911-67968)
[»] scaffold0608 (1 HSPs)
scaffold0608 (182-232)||(1589-1639)


Alignment Details
Target: chr2 (Bit Score: 143; Significance: 3e-75; HSPs: 37)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 36 - 231
Target Start/End: Original strand, 38838995 - 38839191
Alignment:
Q  36 ggtatttcactgtgtgtgtata--tataatgaaatatttgttttagtttaattcagtttatgtgtttttaaatataaattctaaaataaaatcatattac 133  Q
    ||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  38838995 ggtatttcactgtgtgtgtatatatataatgaaatatttgttttagtttaattcagtttatgtgtttttaaatataaattttaaaataaaatcatattac 38839094  T
Q  134 taaggaaaattttctaactttgagattannnnnnnngagatattgacaatattttttaactaatatataaatacaaatgttagcatataagatgttgt 231  Q
    ||||||||| |||||||||||||||||         ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38839095 taaggaaaaatttctaactttgagatt-ttttttttgagatattgaccatattttttaactaatatataaatacaaatgttagcatataagatgttgt 38839191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 176 - 233
Target Start/End: Original strand, 11931754 - 11931811
Alignment:
Q  176 ttgacaatattttttaactaatatataaatacaaatgttagcatataagatgttgttt 233  Q
    ||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  11931754 ttgaccatattttttaactaatatataaatacaaatgttagcatttaagatgttgttt 11931811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 186 - 233
Target Start/End: Original strand, 7799920 - 7799967
Alignment:
Q  186 tttttaactaatatataaatacaaatgttagcatataagatgttgttt 233  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||    
T  7799920 tttttaactaatatataaatacaaatgttagcatgtaagatgttgttt 7799967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 176 - 226
Target Start/End: Complemental strand, 43444739 - 43444689
Alignment:
Q  176 ttgacaatattttttaactaatatataaatacaaatgttagcatataagat 226  Q
    ||||| |||||||||||||||||||||||||||||||||||||| ||||||    
T  43444739 ttgaccatattttttaactaatatataaatacaaatgttagcatgtaagat 43444689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 185 - 230
Target Start/End: Original strand, 4835727 - 4835772
Alignment:
Q  185 ttttttaactaatatataaatacaaatgttagcatataagatgttg 230  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||    
T  4835727 ttttttaactaatatataaatacaaatgttaacatataagatgttg 4835772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 176 - 233
Target Start/End: Original strand, 5405059 - 5405116
Alignment:
Q  176 ttgacaatattttttaactaatatataaatacaaatgttagcatataagatgttgttt 233  Q
    ||||| ||| |||||||||||||||||||||||||| ||||||| |||||||||||||    
T  5405059 ttgaccatactttttaactaatatataaatacaaatattagcatgtaagatgttgttt 5405116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 176 - 233
Target Start/End: Original strand, 6223129 - 6223186
Alignment:
Q  176 ttgacaatattttttaactaatatataaatacaaatgttagcatataagatgttgttt 233  Q
    ||||| |||||||||||||||||||||||||||||| ||||||| ||||||| |||||    
T  6223129 ttgaccatattttttaactaatatataaatacaaatattagcatgtaagatgatgttt 6223186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 176 - 233
Target Start/End: Original strand, 7608112 - 7608169
Alignment:
Q  176 ttgacaatattttttaactaatatataaatacaaatgttagcatataagatgttgttt 233  Q
    ||||| ||| |||||||||||||||||||||||||| ||||||| |||||||||||||    
T  7608112 ttgaccatactttttaactaatatataaatacaaatattagcatgtaagatgttgttt 7608169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 176 - 233
Target Start/End: Complemental strand, 8042221 - 8042164
Alignment:
Q  176 ttgacaatattttttaactaatatataaatacaaatgttagcatataagatgttgttt 233  Q
    ||||| ||| |||||||||||||||||||||||||| ||||||| |||||||||||||    
T  8042221 ttgaccatactttttaactaatatataaatacaaatattagcatgtaagatgttgttt 8042164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 176 - 233
Target Start/End: Complemental strand, 9172345 - 9172288
Alignment:
Q  176 ttgacaatattttttaactaatatataaatacaaatgttagcatataagatgttgttt 233  Q
    ||||| |||||||||||||||| |||||||||||| |||||||| |||||||||||||    
T  9172345 ttgaccatattttttaactaatgtataaatacaaaagttagcatgtaagatgttgttt 9172288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 176 - 233
Target Start/End: Complemental strand, 19141265 - 19141208
Alignment:
Q  176 ttgacaatattttttaactaatatataaatacaaatgttagcatataagatgttgttt 233  Q
    ||||| ||| |||||||||||||||||||||||||| ||||||| |||||||||||||    
T  19141265 ttgaccatactttttaactaatatataaatacaaatattagcatgtaagatgttgttt 19141208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 176 - 233
Target Start/End: Complemental strand, 22839126 - 22839069
Alignment:
Q  176 ttgacaatattttttaactaatatataaatacaaatgttagcatataagatgttgttt 233  Q
    ||||| |||||||||||||| |||||||||  ||||||||||||||||||||||||||    
T  22839126 ttgaccatattttttaactagtatataaattaaaatgttagcatataagatgttgttt 22839069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 176 - 233
Target Start/End: Original strand, 24252023 - 24252079
Alignment:
Q  176 ttgacaatattttttaactaatatataaatacaaatgttagcatataagatgttgttt 233  Q
    ||||| |||||||||||||||||||||||||||||||||||||| ||| |||||||||    
T  24252023 ttgaccatattttttaactaatatataaatacaaatgttagcatgtaa-atgttgttt 24252079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 176 - 233
Target Start/End: Original strand, 38292015 - 38292072
Alignment:
Q  176 ttgacaatattttttaactaatatataaatacaaatgttagcatataagatgttgttt 233  Q
    ||||| |||||||||||||| ||||||||||||||||||| ||| |||||||||||||    
T  38292015 ttgaccatattttttaactagtatataaatacaaatgttaacatgtaagatgttgttt 38292072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 182 - 229
Target Start/End: Original strand, 42133821 - 42133868
Alignment:
Q  182 atattttttaactaatatataaatacaaatgttagcatataagatgtt 229  Q
    ||||||||||||||||||||||||||||||||||||||  ||||||||    
T  42133821 atattttttaactaatatataaatacaaatgttagcatgaaagatgtt 42133868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 176 - 226
Target Start/End: Original strand, 19262743 - 19262793
Alignment:
Q  176 ttgacaatattttttaactaatatataaatacaaatgttagcatataagat 226  Q
    ||||| |||||||||||||||||||||||||||||| ||||||| ||||||    
T  19262743 ttgaccatattttttaactaatatataaatacaaatattagcatgtaagat 19262793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 176 - 233
Target Start/End: Complemental strand, 11841792 - 11841735
Alignment:
Q  176 ttgacaatattttttaactaatatataaatacaaatgttagcatataagatgttgttt 233  Q
    ||||| ||| |||||||||||| ||||||||||||| ||||||| |||||||||||||    
T  11841792 ttgaccatactttttaactaatgtataaatacaaatattagcatgtaagatgttgttt 11841735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 176 - 233
Target Start/End: Original strand, 44365220 - 44365277
Alignment:
Q  176 ttgacaatattttttaactaatatataaatacaaatgttagcatataagatgttgttt 233  Q
    ||||| ||| |||||||||||| ||||||||||||| ||||||| |||||||||||||    
T  44365220 ttgaccatactttttaactaatgtataaatacaaatattagcatgtaagatgttgttt 44365277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 176 - 233
Target Start/End: Original strand, 44644933 - 44644990
Alignment:
Q  176 ttgacaatattttttaactaatatataaatacaaatgttagcatataagatgttgttt 233  Q
    ||||| ||| ||||||||||||||||||||| |||| ||| |||||||||||||||||    
T  44644933 ttgaccatactttttaactaatatataaatataaatattaacatataagatgttgttt 44644990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 176 - 232
Target Start/End: Original strand, 16865117 - 16865173
Alignment:
Q  176 ttgacaatattttttaactaatatataaatacaaatgttagcatataagatgttgtt 232  Q
    ||||| ||| ||||||||||| |||||||||||||||||||||| |||| |||||||    
T  16865117 ttgacgatactttttaactaacatataaatacaaatgttagcatgtaagttgttgtt 16865173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 185 - 233
Target Start/End: Complemental strand, 31610843 - 31610795
Alignment:
Q  185 ttttttaactaatatataaatacaaatgttagcatataagatgttgttt 233  Q
    |||||||||||||||||||||||||||||||| || ||||| |||||||    
T  31610843 ttttttaactaatatataaatacaaatgttagaatgtaagacgttgttt 31610795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 176 - 219
Target Start/End: Complemental strand, 9006983 - 9006940
Alignment:
Q  176 ttgacaatattttttaactaatatataaatacaaatgttagcat 219  Q
    ||||| |||||||||||||||| |||||||||||||||||||||    
T  9006983 ttgaccatattttttaactaatttataaatacaaatgttagcat 9006940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 182 - 233
Target Start/End: Complemental strand, 13125338 - 13125287
Alignment:
Q  182 atattttttaactaatatataaatacaaatgttagcatataagatgttgttt 233  Q
    |||||||||||||||| ||||||||||||| ||||||| |||||| ||||||    
T  13125338 atattttttaactaatgtataaatacaaatattagcatctaagatattgttt 13125287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 178 - 231
Target Start/End: Complemental strand, 1381333 - 1381280
Alignment:
Q  178 gacaatattttttaactaatatataaatacaaatgttagcatataagatgttgt 231  Q
    |||||| |||||| | ||||||||||| ||||| ||||||||||||||||||||    
T  1381333 gacaatttttttttattaatatataaaaacaaaagttagcatataagatgttgt 1381280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 176 - 229
Target Start/End: Original strand, 39358209 - 39358262
Alignment:
Q  176 ttgacaatattttttaactaatatataaatacaaatgttagcatataagatgtt 229  Q
    ||||| ||| |||||||||||| ||||||||||||| ||||||| |||||||||    
T  39358209 ttgaccatactttttaactaatgtataaatacaaatattagcatgtaagatgtt 39358262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 176 - 232
Target Start/End: Complemental strand, 13117523 - 13117467
Alignment:
Q  176 ttgacaatattttttaactaatatataaatacaaatgttagcatataagatgttgtt 232  Q
    ||||| ||||||||||||| ||||||||||| |||| |||| || ||||||||||||    
T  13117523 ttgaccatattttttaactgatatataaatataaatattagtatctaagatgttgtt 13117467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 186 - 233
Target Start/End: Complemental strand, 19165972 - 19165925
Alignment:
Q  186 tttttaactaatatataaatacaaatgttagcatataagatgttgttt 233  Q
    ||||||| |||||||||||||||| ||||| ||| |||||||||||||    
T  19165972 tttttaattaatatataaatacaattgttatcatgtaagatgttgttt 19165925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 185 - 232
Target Start/End: Complemental strand, 24093725 - 24093679
Alignment:
Q  185 ttttttaactaatatataaatacaaatgttagcatataagatgttgtt 232  Q
    |||||||||||| |||||| ||||||||||||||| ||||||||||||    
T  24093725 ttttttaactaacatataa-tacaaatgttagcatgtaagatgttgtt 24093679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 182 - 229
Target Start/End: Original strand, 36072243 - 36072290
Alignment:
Q  182 atattttttaactaatatataaatacaaatgttagcatataagatgtt 229  Q
    |||||||||||||||| |||||||| |||| ||||||| |||||||||    
T  36072243 atattttttaactaatgtataaatataaatattagcatgtaagatgtt 36072290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 176 - 229
Target Start/End: Complemental strand, 2183156 - 2183103
Alignment:
Q  176 ttgacaatattttttaactaatatataaatacaaatgttagcatataagatgtt 229  Q
    ||||| ||| |||||||||||| ||| ||||||||| ||||||| |||||||||    
T  2183156 ttgaccatactttttaactaatgtatgaatacaaatattagcatgtaagatgtt 2183103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 187 - 232
Target Start/End: Complemental strand, 3013884 - 3013839
Alignment:
Q  187 ttttaactaatatataaatacaaatgttagcatataagatgttgtt 232  Q
    |||||||||||||||||||||||||| ||||||  ||| |||||||    
T  3013884 ttttaactaatatataaatacaaatgctagcatgcaagttgttgtt 3013839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 175 - 232
Target Start/End: Complemental strand, 14802973 - 14802916
Alignment:
Q  175 attgacaatattttttaactaatatataaatacaaatgttagcatataagatgttgtt 232  Q
    |||||| ||||||||  ||||||||||||| |||||   |||||||||||||||||||    
T  14802973 attgaccatatttttctactaatatataaagacaaaatatagcatataagatgttgtt 14802916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 183 - 216
Target Start/End: Original strand, 24607838 - 24607871
Alignment:
Q  183 tattttttaactaatatataaatacaaatgttag 216  Q
    |||||||||||||||||||||||| |||||||||    
T  24607838 tattttttaactaatatataaatataaatgttag 24607871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 185 - 233
Target Start/End: Complemental strand, 20387430 - 20387382
Alignment:
Q  185 ttttttaactaatatataaatacaaatgttagcatataagatgttgttt 233  Q
    ||||||||||||||| ||  || |||||||||||| |||||||||||||    
T  20387430 ttttttaactaatatttatgtataaatgttagcatgtaagatgttgttt 20387382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 197 - 229
Target Start/End: Original strand, 34248559 - 34248591
Alignment:
Q  197 tatataaatacaaatgttagcatataagatgtt 229  Q
    ||||||||||||||||||||||| |||||||||    
T  34248559 tatataaatacaaatgttagcatgtaagatgtt 34248591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 185 - 229
Target Start/End: Complemental strand, 36177767 - 36177723
Alignment:
Q  185 ttttttaactaatatataaatacaaatgttagcatataagatgtt 229  Q
    |||||||||||||||||||||| |||| ||| ||| |||||||||    
T  36177767 ttttttaactaatatataaataaaaatattaacatctaagatgtt 36177723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 182 - 226
Target Start/End: Original strand, 40618878 - 40618921
Alignment:
Q  182 atattttttaactaatatataaatacaaatgttagcatataagat 226  Q
    ||||||||||| |||||||||||||||||||||| | ||||||||    
T  40618878 atattttttaa-taatatataaatacaaatgttaacctataagat 40618921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 54; Significance: 4e-22; HSPs: 48)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 176 - 233
Target Start/End: Complemental strand, 27045607 - 27045550
Alignment:
Q  176 ttgacaatattttttaactaatatataaatacaaatgttagcatataagatgttgttt 233  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27045607 ttgaccatattttttaactaatatataaatacaaatgttagcatataagatgttgttt 27045550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 176 - 232
Target Start/End: Complemental strand, 38767258 - 38767202
Alignment:
Q  176 ttgacaatattttttaactaatatataaatacaaatgttagcatataagatgttgtt 232  Q
    ||||| |||||||||||||||||||||||||||||||| || |||||||||||||||    
T  38767258 ttgaccatattttttaactaatatataaatacaaatgtcagtatataagatgttgtt 38767202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 182 - 233
Target Start/End: Complemental strand, 4131696 - 4131645
Alignment:
Q  182 atattttttaactaatatataaatacaaatgttagcatataagatgttgttt 233  Q
    ||||||||||||||||||||||||||||| |||||||| |||||||||||||    
T  4131696 atattttttaactaatatataaatacaaaagttagcatgtaagatgttgttt 4131645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 186 - 236
Target Start/End: Original strand, 41898061 - 41898111
Alignment:
Q  186 tttttaactaatatataaatacaaatgttagcatataagatgttgtttcat 236  Q
    |||||||||||||||||||||||||| ||||||| ||||||||||||||||    
T  41898061 tttttaactaatatataaatacaaatattagcatgtaagatgttgtttcat 41898111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 176 - 233
Target Start/End: Original strand, 3785583 - 3785640
Alignment:
Q  176 ttgacaatattttttaactaatatataaatacaaatgttagcatataagatgttgttt 233  Q
    ||||| ||||||||||||||||||||||||||||||||||| ||| | ||||||||||    
T  3785583 ttgaccatattttttaactaatatataaatacaaatgttagtatacaggatgttgttt 3785640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 176 - 233
Target Start/End: Complemental strand, 6766749 - 6766692
Alignment:
Q  176 ttgacaatattttttaactaatatataaatacaaatgttagcatataagatgttgttt 233  Q
    ||||| |||||||||||||||| ||||||| ||||||||||||| |||||||||||||    
T  6766749 ttgaccatattttttaactaatgtataaatgcaaatgttagcatgtaagatgttgttt 6766692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 176 - 229
Target Start/End: Original strand, 7169189 - 7169242
Alignment:
Q  176 ttgacaatattttttaactaatatataaatacaaatgttagcatataagatgtt 229  Q
    ||||| |||||||||||||||||||||||||||||| ||| |||||||||||||    
T  7169189 ttgactatattttttaactaatatataaatacaaatattaacatataagatgtt 7169242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 176 - 233
Target Start/End: Original strand, 20885166 - 20885223
Alignment:
Q  176 ttgacaatattttttaactaatatataaatacaaatgttagcatataagatgttgttt 233  Q
    ||||| |||||||||||||||| ||||||||||||| ||||||| |||||||||||||    
T  20885166 ttgaccatattttttaactaatgtataaatacaaatattagcatgtaagatgttgttt 20885223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 176 - 233
Target Start/End: Complemental strand, 28061714 - 28061657
Alignment:
Q  176 ttgacaatattttttaactaatatataaatacaaatgttagcatataagatgttgttt 233  Q
    ||||| ||| |||||||||||||||||||||||||| ||||||| |||||||||||||    
T  28061714 ttgaccatactttttaactaatatataaatacaaatattagcatgtaagatgttgttt 28061657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 176 - 233
Target Start/End: Original strand, 36623371 - 36623428
Alignment:
Q  176 ttgacaatattttttaactaatatataaatacaaatgttagcatataagatgttgttt 233  Q
    ||||| ||| |||||||||||||||||||||||||| ||||||| |||||||||||||    
T  36623371 ttgaccatactttttaactaatatataaatacaaatattagcatgtaagatgttgttt 36623428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 176 - 233
Target Start/End: Complemental strand, 39130125 - 39130068
Alignment:
Q  176 ttgacaatattttttaactaatatataaatacaaatgttagcatataagatgttgttt 233  Q
    ||||| |||||||||||||||| ||||||||||||| ||||||| |||||||||||||    
T  39130125 ttgaccatattttttaactaatgtataaatacaaatattagcatgtaagatgttgttt 39130068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 176 - 233
Target Start/End: Complemental strand, 40090117 - 40090060
Alignment:
Q  176 ttgacaatattttttaactaatatataaatacaaatgttagcatataagatgttgttt 233  Q
    ||||| ||| |||||||||||||||||||||||||| ||||||| |||||||||||||    
T  40090117 ttgaccatactttttaactaatatataaatacaaatattagcatgtaagatgttgttt 40090060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 176 - 233
Target Start/End: Complemental strand, 42890542 - 42890485
Alignment:
Q  176 ttgacaatattttttaactaatatataaatacaaatgttagcatataagatgttgttt 233  Q
    ||||| ||| |||||||||||||||||||||||||| ||||||| |||||||||||||    
T  42890542 ttgaccatactttttaactaatatataaatacaaatattagcatgtaagatgttgttt 42890485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 176 - 233
Target Start/End: Complemental strand, 46103569 - 46103512
Alignment:
Q  176 ttgacaatattttttaactaatatataaatacaaatgttagcatataagatgttgttt 233  Q
    ||||| ||| |||||||||||||||||||||||||| ||||||| |||||||||||||    
T  46103569 ttgaccatactttttaactaatatataaatacaaatattagcatgtaagatgttgttt 46103512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 176 - 233
Target Start/End: Original strand, 47156090 - 47156147
Alignment:
Q  176 ttgacaatattttttaactaatatataaatacaaatgttagcatataagatgttgttt 233  Q
    ||||| ||| |||||||||||||||||||||||||| ||||||| |||||||||||||    
T  47156090 ttgaccatactttttaactaatatataaatacaaatattagcatgtaagatgttgttt 47156147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 176 - 233
Target Start/End: Original strand, 48602499 - 48602556
Alignment:
Q  176 ttgacaatattttttaactaatatataaatacaaatgttagcatataagatgttgttt 233  Q
    ||||| ||| |||||||||||||||||||||||||| ||||||| |||||||||||||    
T  48602499 ttgaccatactttttaactaatatataaatacaaatattagcatgtaagatgttgttt 48602556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 182 - 226
Target Start/End: Complemental strand, 37467500 - 37467456
Alignment:
Q  182 atattttttaactaatatataaatacaaatgttagcatataagat 226  Q
    |||||||||||||||||||||||||||||||||||||| ||||||    
T  37467500 atattttttaactaatatataaatacaaatgttagcatttaagat 37467456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 176 - 235
Target Start/End: Complemental strand, 7457921 - 7457862
Alignment:
Q  176 ttgacaatattttttaactaatatataaatacaaatgttagcatataagatgttgtttca 235  Q
    ||||| ||| |||||||||||| ||||||||||||| ||||||| |||||||||||||||    
T  7457921 ttgaccatactttttaactaatgtataaatacaaatattagcatgtaagatgttgtttca 7457862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 182 - 229
Target Start/End: Complemental strand, 44594712 - 44594666
Alignment:
Q  182 atattttttaactaatatataaatacaaatgttagcatataagatgtt 229  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||    
T  44594712 atattttttaactaatatataaatac-aatgttagcatataagatgtt 44594666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 185 - 232
Target Start/End: Complemental strand, 47526026 - 47525979
Alignment:
Q  185 ttttttaactaatatataaatacaaatgttagcatataagatgttgtt 232  Q
    ||||||||||||||||||||||||||||||||||| |||||| |||||    
T  47526026 ttttttaactaatatataaatacaaatgttagcatttaagatcttgtt 47525979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 182 - 232
Target Start/End: Original strand, 36515908 - 36515958
Alignment:
Q  182 atattttttaactaatatataaatacaaatgttagcatataagatgttgtt 232  Q
    |||||||||||  |||||||||||||||||||||| |||||||||||||||    
T  36515908 atattttttaatcaatatataaatacaaatgttagtatataagatgttgtt 36515958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 176 - 229
Target Start/End: Original strand, 5529074 - 5529127
Alignment:
Q  176 ttgacaatattttttaactaatatataaatacaaatgttagcatataagatgtt 229  Q
    ||||| ||||||||||||||||||| ||||| |||||||||||| |||||||||    
T  5529074 ttgactatattttttaactaatatacaaataaaaatgttagcatgtaagatgtt 5529127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 176 - 233
Target Start/End: Original strand, 7438966 - 7439023
Alignment:
Q  176 ttgacaatattttttaactaatatataaatacaaatgttagcatataagatgttgttt 233  Q
    ||||| ||| |||||||||||| ||||||||||||| ||||||| |||||||||||||    
T  7438966 ttgaccatactttttaactaatgtataaatacaaatattagcatgtaagatgttgttt 7439023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 176 - 233
Target Start/End: Original strand, 16778568 - 16778625
Alignment:
Q  176 ttgacaatattttttaactaatatataaatacaaatgttagcatataagatgttgttt 233  Q
    ||||| ||| |||||||||||| ||||||||||||| ||||||| |||||||||||||    
T  16778568 ttgaccataatttttaactaatgtataaatacaaatattagcatgtaagatgttgttt 16778625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 176 - 233
Target Start/End: Complemental strand, 38852046 - 38851989
Alignment:
Q  176 ttgacaatattttttaactaatatataaatacaaatgttagcatataagatgttgttt 233  Q
    ||||| ||| |||||||||||||||||||||||||| ||||||| |||||| ||||||    
T  38852046 ttgaccatactttttaactaatatataaatacaaatattagcatgtaagatattgttt 38851989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 176 - 233
Target Start/End: Original strand, 40256120 - 40256177
Alignment:
Q  176 ttgacaatattttttaactaatatataaatacaaatgttagcatataagatgttgttt 233  Q
    ||||| ||| |||||||||||| ||||||||||||| ||||||| |||||||||||||    
T  40256120 ttgaccatactttttaactaatgtataaatacaaatattagcatgtaagatgttgttt 40256177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 182 - 233
Target Start/End: Complemental strand, 4048927 - 4048876
Alignment:
Q  182 atattttttaactaatatataaatacaaatgttagcatataagatgttgttt 233  Q
    ||||||||||||||||||||||||||||||| |||| | |||| ||||||||    
T  4048927 atattttttaactaatatataaatacaaatgctagcttgtaagttgttgttt 4048876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 186 - 233
Target Start/End: Original strand, 44732085 - 44732132
Alignment:
Q  186 tttttaactaatatataaatacaaatgttagcatataagatgttgttt 233  Q
    |||||||||||| ||||||||||||| ||||||| |||||||||||||    
T  44732085 tttttaactaatgtataaatacaaatattagcatgtaagatgttgttt 44732132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 186 - 233
Target Start/End: Original strand, 46479902 - 46479949
Alignment:
Q  186 tttttaactaatatataaatacaaatgttagcatataagatgttgttt 233  Q
    |||||||||||| ||||||||||||| ||||||| |||||||||||||    
T  46479902 tttttaactaatgtataaatacaaatattagcatgtaagatgttgttt 46479949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 182 - 233
Target Start/End: Complemental strand, 49102006 - 49101955
Alignment:
Q  182 atattttttaactaatatataaatacaaatgttagcatataagatgttgttt 233  Q
    ||||||||||||||||| |||||||||||| || |||| |||||||||||||    
T  49102006 atattttttaactaatacataaatacaaatttttgcatgtaagatgttgttt 49101955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 185 - 231
Target Start/End: Complemental strand, 35570239 - 35570193
Alignment:
Q  185 ttttttaactaatatataaatacaaatgttagcatataagatgttgt 231  Q
    |||||||||||||||| |||||||||| ||||||| |||||||||||    
T  35570239 ttttttaactaatatacaaatacaaattttagcatgtaagatgttgt 35570193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 176 - 233
Target Start/End: Complemental strand, 32431557 - 32431500
Alignment:
Q  176 ttgacaatattttttaactaatatataaatacaaatgttagcatataagatgttgttt 233  Q
    ||||| ||| |||||||||||| ||||||||||||| |||| || |||||||||||||    
T  32431557 ttgaccatactttttaactaatgtataaatacaaatattagtatgtaagatgttgttt 32431500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 177 - 229
Target Start/End: Original strand, 6174900 - 6174952
Alignment:
Q  177 tgacaatattttttaactaatatataaatacaaatgttagcatataagatgtt 229  Q
    |||| |||||||||||||||| ||||||||||||  ||||||| |||||||||    
T  6174900 tgaccatattttttaactaatgtataaatacaaacattagcatgtaagatgtt 6174952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 185 - 233
Target Start/End: Original strand, 21379816 - 21379864
Alignment:
Q  185 ttttttaactaatatataaatacaaatgttagcatataagatgttgttt 233  Q
    ||||||| ||||| ||||||||||||| ||||||| |||||||||||||    
T  21379816 ttttttagctaatgtataaatacaaatattagcatgtaagatgttgttt 21379864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 176 - 233
Target Start/End: Original strand, 8683881 - 8683935
Alignment:
Q  176 ttgacaatattttttaactaatatataaatacaaatgttagcatataagatgttgttt 233  Q
    ||||| ||| |||||||||||||||||||||||||| ||||||   ||||||||||||    
T  8683881 ttgaccatactttttaactaatatataaatacaaatattagca---aagatgttgttt 8683935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 186 - 233
Target Start/End: Complemental strand, 11502769 - 11502722
Alignment:
Q  186 tttttaactaatatataaatacaaatgttagcatataagatgttgttt 233  Q
    |||||||||||| ||||||||||||| ||||||| |||||||| ||||    
T  11502769 tttttaactaatgtataaatacaaatattagcatgtaagatgtcgttt 11502722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 186 - 229
Target Start/End: Original strand, 25923482 - 25923525
Alignment:
Q  186 tttttaactaatatataaatacaaatgttagcatataagatgtt 229  Q
    ||||||| |||||||||||  |||||||||||||||||||||||    
T  25923482 tttttaattaatatataaagtcaaatgttagcatataagatgtt 25923525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 186 - 229
Target Start/End: Original strand, 26161669 - 26161712
Alignment:
Q  186 tttttaactaatatataaatacaaatgttagcatataagatgtt 229  Q
    |||||||||||||||||||||||||| ||||||| ||| |||||    
T  26161669 tttttaactaatatataaatacaaatattagcatgtaaaatgtt 26161712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 186 - 233
Target Start/End: Original strand, 36585182 - 36585229
Alignment:
Q  186 tttttaactaatatataaatacaaatgttagcatataagatgttgttt 233  Q
    |||| ||||||| ||||||||||||| ||||||| |||||||||||||    
T  36585182 ttttaaactaatgtataaatacaaatattagcatgtaagatgttgttt 36585229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 182 - 229
Target Start/End: Complemental strand, 39278524 - 39278477
Alignment:
Q  182 atattttttaactaatatataaatacaaatgttagcatataagatgtt 229  Q
    ||||||||||||||||||||||||| ||||||||| || ||| |||||    
T  39278524 atattttttaactaatatataaatataaatgttagtatgtaaaatgtt 39278477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 190 - 233
Target Start/End: Complemental strand, 41134673 - 41134630
Alignment:
Q  190 taactaatatataaatacaaatgttagcatataagatgttgttt 233  Q
    |||||||| ||||||||||||| ||||||| |||||||||||||    
T  41134673 taactaatgtataaatacaaatattagcatgtaagatgttgttt 41134630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 176 - 215
Target Start/End: Complemental strand, 49110669 - 49110630
Alignment:
Q  176 ttgacaatattttttaactaatatataaatacaaatgtta 215  Q
    ||||| |||||||||||||||||||| |||||||||||||    
T  49110669 ttgaccatattttttaactaatatattaatacaaatgtta 49110630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 187 - 233
Target Start/End: Original strand, 35117199 - 35117245
Alignment:
Q  187 ttttaactaatatataaatacaaatgttagcatataagatgttgttt 233  Q
    ||||||||||| |||||||| |||| ||||||| |||||||||||||    
T  35117199 ttttaactaatgtataaatataaatattagcatgtaagatgttgttt 35117245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 186 - 232
Target Start/End: Original strand, 36341693 - 36341739
Alignment:
Q  186 tttttaactaatatataaatacaaatgttagcatataagatgttgtt 232  Q
    ||||||||||| ||||||||| ||||||||| || ||||||||||||    
T  36341693 tttttaactaacatataaatataaatgttagaatgtaagatgttgtt 36341739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 176 - 230
Target Start/End: Original strand, 41088650 - 41088704
Alignment:
Q  176 ttgacaatattttttaactaatatataaatacaaatgttagcatataagatgttg 230  Q
    ||||| |||||||||||||||| ||||||| ||||| ||| ||| ||||||||||    
T  41088650 ttgaccatattttttaactaatgtataaatgcaaatattaacatgtaagatgttg 41088704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 176 - 233
Target Start/End: Original strand, 3851137 - 3851194
Alignment:
Q  176 ttgacaatattttttaactaatatataaatacaaatgttagcatataagatgttgttt 233  Q
    ||||||||| |||||||||||| ||||||||||||| ||| ||  |||||| ||||||    
T  3851137 ttgacaatactttttaactaatgtataaatacaaatattaacacgtaagatattgttt 3851194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 176 - 233
Target Start/End: Original strand, 30342137 - 30342194
Alignment:
Q  176 ttgacaatattttttaactaatatataaatacaaatgttagcatataagatgttgttt 233  Q
    ||||| ||| |||||||||||| ||||||||||||| |||| || |||||||| ||||    
T  30342137 ttgactatactttttaactaatgtataaatacaaatattagtatgtaagatgtcgttt 30342194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 176 - 233
Target Start/End: Original strand, 42877449 - 42877506
Alignment:
Q  176 ttgacaatattttttaactaatatataaatacaaatgttagcatataagatgttgttt 233  Q
    ||||| ||| |||||||||||| |||||||| |||| |||| || |||||||||||||    
T  42877449 ttgaccatactttttaactaatgtataaataaaaatattagaatgtaagatgttgttt 42877506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 50; Significance: 1e-19; HSPs: 54)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 176 - 233
Target Start/End: Original strand, 7614678 - 7614735
Alignment:
Q  176 ttgacaatattttttaactaatatataaatacaaatgttagcatataagatgttgttt 233  Q
    ||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  7614678 ttgaccatattttttaactaatatataaatacaaatgttagcatgtaagatgttgttt 7614735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 176 - 231
Target Start/End: Complemental strand, 56297901 - 56297846
Alignment:
Q  176 ttgacaatattttttaactaatatataaatacaaatgttagcatataagatgttgt 231  Q
    ||||| |||||| ||||||||||||||||||||||||||||||||||| |||||||    
T  56297901 ttgaccatatttattaactaatatataaatacaaatgttagcatataaaatgttgt 56297846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 176 - 226
Target Start/End: Complemental strand, 2571081 - 2571031
Alignment:
Q  176 ttgacaatattttttaactaatatataaatacaaatgttagcatataagat 226  Q
    ||||| |||||||||||||||||||||||||||||||||||||| ||||||    
T  2571081 ttgactatattttttaactaatatataaatacaaatgttagcatgtaagat 2571031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 176 - 238
Target Start/End: Complemental strand, 35381093 - 35381031
Alignment:
Q  176 ttgacaatattttttaactaatatataaatacaaatgttagcatataagatgttgtttcatct 238  Q
    ||||| ||| |||||||||||||||||||||||||| ||||||| ||||||||||||| ||||    
T  35381093 ttgaccatactttttaactaatatataaatacaaatattagcatgtaagatgttgtttgatct 35381031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 182 - 232
Target Start/End: Original strand, 38721406 - 38721456
Alignment:
Q  182 atattttttaactaatatataaatacaaatgttagcatataagatgttgtt 232  Q
    |||||||||||| ||||||||||||||||||||||||| ||||||||||||    
T  38721406 atattttttaacaaatatataaatacaaatgttagcatgtaagatgttgtt 38721456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 176 - 229
Target Start/End: Complemental strand, 2760926 - 2760873
Alignment:
Q  176 ttgacaatattttttaactaatatataaatacaaatgttagcatataagatgtt 229  Q
    ||||| |||||||||||||||||||||||||||||| ||||||| |||||||||    
T  2760926 ttgaccatattttttaactaatatataaatacaaatattagcatgtaagatgtt 2760873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 176 - 233
Target Start/End: Complemental strand, 20875446 - 20875389
Alignment:
Q  176 ttgacaatattttttaactaatatataaatacaaatgttagcatataagatgttgttt 233  Q
    ||||| ||||||||||||||||||||||||  ||||||| ||||||||||||||||||    
T  20875446 ttgaccatattttttaactaatatataaatgtaaatgtttgcatataagatgttgttt 20875389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 176 - 233
Target Start/End: Original strand, 26125771 - 26125828
Alignment:
Q  176 ttgacaatattttttaactaatatataaatacaaatgttagcatataagatgttgttt 233  Q
    ||||| |||||||||||||||| ||||||||||||| ||||||| |||||||||||||    
T  26125771 ttgaccatattttttaactaatgtataaatacaaatattagcatgtaagatgttgttt 26125828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 176 - 233
Target Start/End: Original strand, 29830406 - 29830463
Alignment:
Q  176 ttgacaatattttttaactaatatataaatacaaatgttagcatataagatgttgttt 233  Q
    ||||| ||| |||||||||||||||||||||||||| ||||||| |||||||||||||    
T  29830406 ttgaccatactttttaactaatatataaatacaaatattagcatgtaagatgttgttt 29830463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 176 - 233
Target Start/End: Complemental strand, 38416849 - 38416792
Alignment:
Q  176 ttgacaatattttttaactaatatataaatacaaatgttagcatataagatgttgttt 233  Q
    ||||| ||| |||||||||||||||||||||||||| ||||||| |||||||||||||    
T  38416849 ttgaccatactttttaactaatatataaatacaaatattagcatgtaagatgttgttt 38416792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 176 - 233
Target Start/End: Original strand, 43967786 - 43967843
Alignment:
Q  176 ttgacaatattttttaactaatatataaatacaaatgttagcatataagatgttgttt 233  Q
    ||||| ||| |||||||||||||||||||||||||| ||||||| |||||||||||||    
T  43967786 ttgaccatactttttaactaatatataaatacaaatattagcatgtaagatgttgttt 43967843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 176 - 233
Target Start/End: Complemental strand, 44232276 - 44232219
Alignment:
Q  176 ttgacaatattttttaactaatatataaatacaaatgttagcatataagatgttgttt 233  Q
    ||||| ||| |||||||||||||||||||||||||| ||||||| |||||||||||||    
T  44232276 ttgaccatactttttaactaatatataaatacaaatattagcatgtaagatgttgttt 44232219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 176 - 233
Target Start/End: Complemental strand, 47386485 - 47386428
Alignment:
Q  176 ttgacaatattttttaactaatatataaatacaaatgttagcatataagatgttgttt 233  Q
    ||||| |||||||||||||||| ||||||||||||| ||||||| |||||||||||||    
T  47386485 ttgaccatattttttaactaatgtataaatacaaatattagcatgtaagatgttgttt 47386428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 176 - 233
Target Start/End: Complemental strand, 54330889 - 54330832
Alignment:
Q  176 ttgacaatattttttaactaatatataaatacaaatgttagcatataagatgttgttt 233  Q
    ||||| ||| |||||||||||||||||||||||||| ||||||| |||||||||||||    
T  54330889 ttgaccatactttttaactaatatataaatacaaatattagcatgtaagatgttgttt 54330832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 176 - 233
Target Start/End: Complemental strand, 55209773 - 55209716
Alignment:
Q  176 ttgacaatattttttaactaatatataaatacaaatgttagcatataagatgttgttt 233  Q
    ||||| ||| |||||||||||||||||||||||||| ||||||| |||||||||||||    
T  55209773 ttgaccatactttttaactaatatataaatacaaatattagcatgtaagatgttgttt 55209716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 189 - 229
Target Start/End: Original strand, 34316596 - 34316636
Alignment:
Q  189 ttaactaatatataaatacaaatgttagcatataagatgtt 229  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  34316596 ttaactaatatataaatacaaatgttagcatataagatgtt 34316636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 176 - 232
Target Start/End: Complemental strand, 36523167 - 36523111
Alignment:
Q  176 ttgacaatattttttaactaatatataaatacaaatgttagcatataagatgttgtt 232  Q
    ||||| ||| |||||||||||||||||||||||||||||| ||| ||||||||||||    
T  36523167 ttgactatactttttaactaatatataaatacaaatgttaacatgtaagatgttgtt 36523111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 186 - 233
Target Start/End: Original strand, 45291905 - 45291952
Alignment:
Q  186 tttttaactaatatataaatacaaatgttagcatataagatgttgttt 233  Q
    |||||||||||||||||||||||||| ||||||| |||||||||||||    
T  45291905 tttttaactaatatataaatacaaatattagcatgtaagatgttgttt 45291952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 182 - 233
Target Start/End: Complemental strand, 55091380 - 55091329
Alignment:
Q  182 atattttttaactaatatataaatacaaatgttagcatataagatgttgttt 233  Q
    ||||||||||| ||||||||||||||||||||||| || |||||||||||||    
T  55091380 atattttttaattaatatataaatacaaatgttagtatgtaagatgttgttt 55091329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 185 - 227
Target Start/End: Original strand, 52227097 - 52227139
Alignment:
Q  185 ttttttaactaatatataaatacaaatgttagcatataagatg 227  Q
    ||||||| |||||||||||||||||||||||||||||||||||    
T  52227097 ttttttatctaatatataaatacaaatgttagcatataagatg 52227139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 176 - 233
Target Start/End: Complemental strand, 4467718 - 4467661
Alignment:
Q  176 ttgacaatattttttaactaatatataaatacaaatgttagcatataagatgttgttt 233  Q
    ||||| ||| |||||||||||| ||||||||||||| ||||||| |||||||||||||    
T  4467718 ttgactatactttttaactaatgtataaatacaaatattagcatgtaagatgttgttt 4467661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 176 - 233
Target Start/End: Complemental strand, 12240377 - 12240320
Alignment:
Q  176 ttgacaatattttttaactaatatataaatacaaatgttagcatataagatgttgttt 233  Q
    ||||| ||| |||||||||||| ||||||||||||| ||||||| |||||||||||||    
T  12240377 ttgaccatactttttaactaatgtataaatacaaatattagcatgtaagatgttgttt 12240320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 176 - 233
Target Start/End: Original strand, 12625314 - 12625371
Alignment:
Q  176 ttgacaatattttttaactaatatataaatacaaatgttagcatataagatgttgttt 233  Q
    ||||| ||| |||||||||||| ||||||||||||| ||||||| |||||||||||||    
T  12625314 ttgaccatactttttaactaatgtataaatacaaatattagcatgtaagatgttgttt 12625371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 184 - 233
Target Start/End: Complemental strand, 14144648 - 14144599
Alignment:
Q  184 attttttaactaatatataaatacaaatgttagcatataagatgttgttt 233  Q
    |||||||||||||||||||||||||||| |||| || |||||||||||||    
T  14144648 attttttaactaatatataaatacaaatattagtatgtaagatgttgttt 14144599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 176 - 233
Target Start/End: Original strand, 17610343 - 17610400
Alignment:
Q  176 ttgacaatattttttaactaatatataaatacaaatgttagcatataagatgttgttt 233  Q
    ||||| |||||||||| ||||| ||||||||||||| ||||||| |||||||||||||    
T  17610343 ttgaccatattttttagctaatgtataaatacaaatattagcatgtaagatgttgttt 17610400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 176 - 233
Target Start/End: Complemental strand, 19903849 - 19903792
Alignment:
Q  176 ttgacaatattttttaactaatatataaatacaaatgttagcatataagatgttgttt 233  Q
    ||||| |||| ||||||||||||||||||||||||||||||||| | |||| ||||||    
T  19903849 ttgaccatatattttaactaatatataaatacaaatgttagcatgtgagatattgttt 19903792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 176 - 233
Target Start/End: Complemental strand, 25296779 - 25296722
Alignment:
Q  176 ttgacaatattttttaactaatatataaatacaaatgttagcatataagatgttgttt 233  Q
    ||||| ||| |||||||||||| ||||||||||||| ||||||| |||||||||||||    
T  25296779 ttgaccatactttttaactaatgtataaatacaaatattagcatgtaagatgttgttt 25296722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 176 - 233
Target Start/End: Original strand, 26170049 - 26170106
Alignment:
Q  176 ttgacaatattttttaactaatatataaatacaaatgttagcatataagatgttgttt 233  Q
    ||||| ||| |||||||||||| ||||||||||||| ||||||| |||||||||||||    
T  26170049 ttgaccatactttttaactaatgtataaatacaaatattagcatgtaagatgttgttt 26170106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 176 - 232
Target Start/End: Original strand, 56080045 - 56080102
Alignment:
Q  176 ttgacaatattttttaactaatatataaatac-aaatgttagcatataagatgttgtt 232  Q
    ||||| ||||||||||||||||||||| |||| |||||||| ||||||||||||||||    
T  56080045 ttgactatattttttaactaatatatacatacaaaatgttatcatataagatgttgtt 56080102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 185 - 229
Target Start/End: Original strand, 10550498 - 10550542
Alignment:
Q  185 ttttttaactaatatataaatacaaatgttagcatataagatgtt 229  Q
    |||||||||||||||||||||| |||||||||||| |||||||||    
T  10550498 ttttttaactaatatataaataaaaatgttagcatgtaagatgtt 10550542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 185 - 233
Target Start/End: Complemental strand, 27344138 - 27344090
Alignment:
Q  185 ttttttaactaatatataaatacaaatgttagcatataagatgttgttt 233  Q
    |||||||||||||||||||||| |||| ||| |||||||||||||||||    
T  27344138 ttttttaactaatatataaataaaaatattaacatataagatgttgttt 27344090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 176 - 232
Target Start/End: Original strand, 38716949 - 38717005
Alignment:
Q  176 ttgacaatattttttaactaatatataaatacaaatgttagcatataagatgttgtt 232  Q
    ||||| ||| |||||||||||| ||||||||||||| ||||||| ||||||||||||    
T  38716949 ttgaccatactttttaactaatgtataaatacaaatattagcatgtaagatgttgtt 38717005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 186 - 233
Target Start/End: Original strand, 39307769 - 39307816
Alignment:
Q  186 tttttaactaatatataaatacaaatgttagcatataagatgttgttt 233  Q
    ||||||||||||||||||||||||||||||| || ||| |||||||||    
T  39307769 tttttaactaatatataaatacaaatgttagtatgtaaaatgttgttt 39307816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 186 - 232
Target Start/End: Complemental strand, 51355227 - 51355181
Alignment:
Q  186 tttttaactaatatataaatacaaatgttagcatataagatgttgtt 232  Q
    |||||| |||||||||||||||||||||||| ||||| |||||||||    
T  51355227 tttttagctaatatataaatacaaatgttagtatatacgatgttgtt 51355181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 176 - 233
Target Start/End: Original strand, 35686436 - 35686493
Alignment:
Q  176 ttgacaatattttttaactaatatataaatacaaatgttagcatataagatgttgttt 233  Q
    ||||| ||| |||||||||||| ||||||||||||| ||| ||| |||||||||||||    
T  35686436 ttgaccatactttttaactaatgtataaatacaaatattatcatgtaagatgttgttt 35686493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 176 - 233
Target Start/End: Original strand, 50205806 - 50205863
Alignment:
Q  176 ttgacaatattttttaactaatatataaatacaaatgttagcatataagatgttgttt 233  Q
    ||||| ||| |||||||||||||||||||||||||| |||||   |||||||||||||    
T  50205806 ttgaccatactttttaactaatatataaatacaaatattagctcgtaagatgttgttt 50205863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 179 - 226
Target Start/End: Original strand, 2068045 - 2068092
Alignment:
Q  179 acaatattttttaactaatatataaatacaaatgttagcatataagat 226  Q
    |||||||||||||| ||||||||||||| |||||||| | ||||||||    
T  2068045 acaatattttttaattaatatataaatataaatgttaacgtataagat 2068092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 176 - 219
Target Start/End: Original strand, 3037043 - 3037086
Alignment:
Q  176 ttgacaatattttttaactaatatataaatacaaatgttagcat 219  Q
    ||||| ||| |||||||||||||||||||||||||| |||||||    
T  3037043 ttgaccatactttttaactaatatataaatacaaatattagcat 3037086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 176 - 215
Target Start/End: Complemental strand, 5119120 - 5119081
Alignment:
Q  176 ttgacaatattttttaactaatatataaatacaaatgtta 215  Q
    ||||| ||||||||||| ||||||||||||||||||||||    
T  5119120 ttgaccatattttttaattaatatataaatacaaatgtta 5119081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 186 - 233
Target Start/End: Complemental strand, 19433547 - 19433500
Alignment:
Q  186 tttttaactaatatataaatacaaatgttagcatataagatgttgttt 233  Q
    |||||||||| | ||||||||||||| ||||||| |||||||||||||    
T  19433547 tttttaactattgtataaatacaaatattagcatgtaagatgttgttt 19433500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 176 - 211
Target Start/End: Original strand, 29051747 - 29051782
Alignment:
Q  176 ttgacaatattttttaactaatatataaatacaaat 211  Q
    ||||| ||||||||||||||||||||||||||||||    
T  29051747 ttgaccatattttttaactaatatataaatacaaat 29051782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 186 - 233
Target Start/End: Original strand, 30446370 - 30446417
Alignment:
Q  186 tttttaactaatatataaatacaaatgttagcatataagatgttgttt 233  Q
    ||||| |||||||||||||||||||||||||| | ||| |||||||||    
T  30446370 tttttgactaatatataaatacaaatgttagcctgtaaaatgttgttt 30446417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 182 - 233
Target Start/End: Complemental strand, 32871552 - 32871501
Alignment:
Q  182 atattttttaactaatatataaatacaaatgttagcatataagatgttgttt 233  Q
    |||||||||||||||||| ||||||||||||| || || || ||||||||||    
T  32871552 atattttttaactaatatgtaaatacaaatgtaagtatgtaggatgttgttt 32871501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 187 - 233
Target Start/End: Complemental strand, 17446821 - 17446775
Alignment:
Q  187 ttttaactaatatataaatacaaatgttagcatataagatgttgttt 233  Q
    ||||||||||| ||||||||||||| ||| ||| |||||||||||||    
T  17446821 ttttaactaatgtataaatacaaatattaacatgtaagatgttgttt 17446775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 186 - 233
Target Start/End: Complemental strand, 27407808 - 27407759
Alignment:
Q  186 tttttaactaatatataaatacaaatgttagca--tataagatgttgttt 233  Q
    |||||||||||||||||||||||||| ||||||  | |||||||||||||    
T  27407808 tttttaactaatatataaatacaaatattagcatgtgtaagatgttgttt 27407759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 182 - 232
Target Start/End: Original strand, 50181129 - 50181179
Alignment:
Q  182 atattttttaactaatatataaatacaaatgttagcatataagatgttgtt 232  Q
    ||||||||||| |||| ||||||||||||| ||||||| |||||| |||||    
T  50181129 atattttttaattaatgtataaatacaaatattagcatgtaagatattgtt 50181179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 176 - 233
Target Start/End: Complemental strand, 9029648 - 9029591
Alignment:
Q  176 ttgacaatattttttaactaatatataaatacaaatgttagcatataagatgttgttt 233  Q
    ||||| ||| |||||||||||| ||||||||||||| ||||||  |||||| ||||||    
T  9029648 ttgaccatactttttaactaatgtataaatacaaatattagcacgtaagatattgttt 9029591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 182 - 215
Target Start/End: Original strand, 25633265 - 25633298
Alignment:
Q  182 atattttttaactaatatataaatacaaatgtta 215  Q
    ||||||||||| ||||||||||||||||||||||    
T  25633265 atattttttaattaatatataaatacaaatgtta 25633298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 196 - 229
Target Start/End: Original strand, 28494294 - 28494327
Alignment:
Q  196 atatataaatacaaatgttagcatataagatgtt 229  Q
    ||||||||||||||||||||| ||||||||||||    
T  28494294 atatataaatacaaatgttagtatataagatgtt 28494327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 176 - 233
Target Start/End: Original strand, 31010277 - 31010334
Alignment:
Q  176 ttgacaatattttttaactaatatataaatacaaatgttagcatataagatgttgttt 233  Q
    ||||| ||| |||||||||||| |||||||| |||| ||||||| |||||| ||||||    
T  31010277 ttgaccatactttttaactaatgtataaataaaaatattagcatgtaagatattgttt 31010334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 176 - 233
Target Start/End: Complemental strand, 37767157 - 37767100
Alignment:
Q  176 ttgacaatattttttaactaatatataaatacaaatgttagcatataagatgttgttt 233  Q
    ||||| ||| ||||||||  ||||||||||||||||||||| || |||||| ||||||    
T  37767157 ttgactatactttttaacgtatatataaatacaaatgttagaatgtaagatattgttt 37767100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 186 - 219
Target Start/End: Complemental strand, 51456543 - 51456510
Alignment:
Q  186 tttttaactaatatataaatacaaatgttagcat 219  Q
    |||||||||||||||||||||||||| |||||||    
T  51456543 tttttaactaatatataaatacaaattttagcat 51456510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 196 - 232
Target Start/End: Original strand, 27755806 - 27755842
Alignment:
Q  196 atatataaatacaaatgttagcatataagatgttgtt 232  Q
    |||||||||||||||||||||||  ||||||||||||    
T  27755806 atatataaatacaaatgttagcacgtaagatgttgtt 27755842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 198 - 234
Target Start/End: Complemental strand, 34652193 - 34652157
Alignment:
Q  198 atataaatacaaatgttagcatataagatgttgtttc 234  Q
    |||||||||||||| ||||||| ||||||||||||||    
T  34652193 atataaatacaaatattagcatgtaagatgttgtttc 34652157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 48; Significance: 2e-18; HSPs: 40)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 182 - 229
Target Start/End: Complemental strand, 41252956 - 41252909
Alignment:
Q  182 atattttttaactaatatataaatacaaatgttagcatataagatgtt 229  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||    
T  41252956 atattttttaactaatatataaatacaaatgttagcatataagatgtt 41252909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 184 - 233
Target Start/End: Complemental strand, 15332997 - 15332948
Alignment:
Q  184 attttttaactaatatataaatacaaatgttagcatataagatgttgttt 233  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||    
T  15332997 attttttaactaatatataaatacaaatgttagcatgtaagatgttgttt 15332948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 182 - 233
Target Start/End: Complemental strand, 41751603 - 41751552
Alignment:
Q  182 atattttttaactaatatataaatacaaatgttagcatataagatgttgttt 233  Q
    |||||||||||||||||||||||||||||||||||||| || ||||||||||    
T  41751603 atattttttaactaatatataaatacaaatgttagcatttacgatgttgttt 41751552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 179 - 233
Target Start/End: Original strand, 41943280 - 41943334
Alignment:
Q  179 acaatattttttaactaatatataaatacaaatgttagcatataagatgttgttt 233  Q
    ||||||||||||||||||||| |||||||||||||||  ||||||||||||||||    
T  41943280 acaatattttttaactaatatttaaatacaaatgttaatatataagatgttgttt 41943334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 176 - 233
Target Start/End: Complemental strand, 13499534 - 13499477
Alignment:
Q  176 ttgacaatattttttaactaatatataaatacaaatgttagcatataagatgttgttt 233  Q
    ||||| ||| |||||||||||||||||||||||||| ||||||| |||||||||||||    
T  13499534 ttgaccatactttttaactaatatataaatacaaatattagcatgtaagatgttgttt 13499477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 176 - 233
Target Start/End: Complemental strand, 27334930 - 27334873
Alignment:
Q  176 ttgacaatattttttaactaatatataaatacaaatgttagcatataagatgttgttt 233  Q
    ||||| ||| |||||||||||||||||||||||||| ||||||| |||||||||||||    
T  27334930 ttgaccatactttttaactaatatataaatacaaatattagcatgtaagatgttgttt 27334873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 176 - 233
Target Start/End: Original strand, 30213867 - 30213924
Alignment:
Q  176 ttgacaatattttttaactaatatataaatacaaatgttagcatataagatgttgttt 233  Q
    ||||| ||| |||||||||||||||||||||||||| ||||||| |||||||||||||    
T  30213867 ttgaccatactttttaactaatatataaatacaaatattagcatgtaagatgttgttt 30213924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 176 - 233
Target Start/End: Original strand, 33415862 - 33415919
Alignment:
Q  176 ttgacaatattttttaactaatatataaatacaaatgttagcatataagatgttgttt 233  Q
    ||||| ||| |||||||||||||||||||||||||| ||||||| |||||||||||||    
T  33415862 ttgaccatactttttaactaatatataaatacaaatattagcatgtaagatgttgttt 33415919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 176 - 233
Target Start/End: Original strand, 38137887 - 38137944
Alignment:
Q  176 ttgacaatattttttaactaatatataaatacaaatgttagcatataagatgttgttt 233  Q
    ||||| |||||||||||||||| ||||||||||||| ||||||| |||||||||||||    
T  38137887 ttgaccatattttttaactaatgtataaatacaaatattagcatgtaagatgttgttt 38137944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 176 - 233
Target Start/End: Complemental strand, 39866340 - 39866283
Alignment:
Q  176 ttgacaatattttttaactaatatataaatacaaatgttagcatataagatgttgttt 233  Q
    ||||| ||| |||||||||||||||||||||||||| ||||||| |||||||||||||    
T  39866340 ttgaccatactttttaactaatatataaatacaaatattagcatgtaagatgttgttt 39866283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 176 - 233
Target Start/End: Complemental strand, 42490395 - 42490338
Alignment:
Q  176 ttgacaatattttttaactaatatataaatacaaatgttagcatataagatgttgttt 233  Q
    ||||| ||| |||||||||||||||||||||||||| ||||||| |||||||||||||    
T  42490395 ttgaccatactttttaactaatatataaatacaaatattagcatgtaagatgttgttt 42490338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 176 - 233
Target Start/End: Complemental strand, 42761682 - 42761625
Alignment:
Q  176 ttgacaatattttttaactaatatataaatacaaatgttagcatataagatgttgttt 233  Q
    ||||| ||| |||||||||||||||||||||||||| ||||||| |||||||||||||    
T  42761682 ttgaccatactttttaactaatatataaatacaaatattagcatgtaagatgttgttt 42761625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 176 - 224
Target Start/End: Original strand, 3017854 - 3017902
Alignment:
Q  176 ttgacaatattttttaactaatatataaatacaaatgttagcatataag 224  Q
    ||||| |||||||||||||| ||||||||||||||||||||||||||||    
T  3017854 ttgaccatattttttaactattatataaatacaaatgttagcatataag 3017902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 177 - 233
Target Start/End: Original strand, 17643795 - 17643851
Alignment:
Q  177 tgacaatattttttaactaatatataaatacaaatgttagcatataagatgttgttt 233  Q
    |||| |||||||||||||||||| ||||||||||||||||||| |||||| ||||||    
T  17643795 tgactatattttttaactaatatgtaaatacaaatgttagcatgtaagatattgttt 17643851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 186 - 233
Target Start/End: Complemental strand, 27010663 - 27010616
Alignment:
Q  186 tttttaactaatatataaatacaaatgttagcatataagatgttgttt 233  Q
    |||||||||||||||||||||||||| ||||||| |||||||||||||    
T  27010663 tttttaactaatatataaatacaaatattagcatgtaagatgttgttt 27010616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 176 - 218
Target Start/End: Complemental strand, 27813487 - 27813445
Alignment:
Q  176 ttgacaatattttttaactaatatataaatacaaatgttagca 218  Q
    ||||| |||||||||||||||||||||||||||||||||||||    
T  27813487 ttgactatattttttaactaatatataaatacaaatgttagca 27813445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 182 - 232
Target Start/End: Original strand, 30057368 - 30057418
Alignment:
Q  182 atattttttaactaatatataaatacaaatgttagcatataagatgttgtt 232  Q
    |||||||||||||||||||||||  ||||||||||||||||||||| ||||    
T  30057368 atattttttaactaatatataaaagcaaatgttagcatataagatgatgtt 30057418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 176 - 233
Target Start/End: Original strand, 20765259 - 20765316
Alignment:
Q  176 ttgacaatattttttaactaatatataaatacaaatgttagcatataagatgttgttt 233  Q
    ||||| ||| |||||||||||||||||||||||||| ||| ||| |||||||||||||    
T  20765259 ttgactatactttttaactaatatataaatacaaatattaacatgtaagatgttgttt 20765316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 176 - 233
Target Start/End: Original strand, 21797619 - 21797676
Alignment:
Q  176 ttgacaatattttttaactaatatataaatacaaatgttagcatataagatgttgttt 233  Q
    ||||| ||| |||||||||||| ||||||||||||| ||||||| |||||||||||||    
T  21797619 ttgaccatactttttaactaatgtataaatacaaatattagcatgtaagatgttgttt 21797676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 182 - 233
Target Start/End: Original strand, 6910403 - 6910454
Alignment:
Q  182 atattttttaactaatatataaatacaaatgttagcatataagatgttgttt 233  Q
    |||||||||||||||| ||||||||||||| ||| ||| |||||||||||||    
T  6910403 atattttttaactaatgtataaatacaaatattaacatgtaagatgttgttt 6910454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 182 - 233
Target Start/End: Complemental strand, 15568128 - 15568077
Alignment:
Q  182 atattttttaactaatatataaatacaaatgttagcatataagatgttgttt 233  Q
    |||||||||||||||||||||||||||||||||| | | |||||| ||||||    
T  15568128 atattttttaactaatatataaatacaaatgttaccgtgtaagatattgttt 15568077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 183 - 229
Target Start/End: Complemental strand, 23940554 - 23940508
Alignment:
Q  183 tattttttaactaatatataaatacaaatgttagcatataagatgtt 229  Q
    |||||||||||||||||||||||| |||||||| ||| |||||||||    
T  23940554 tattttttaactaatatataaataaaaatgttaacatgtaagatgtt 23940508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 186 - 232
Target Start/End: Complemental strand, 28389262 - 28389216
Alignment:
Q  186 tttttaactaatatataaatacaaatgttagcatataagatgttgtt 232  Q
    ||||| ||||||||| ||| |||||||||||||||||||||||||||    
T  28389262 ttttttactaatatacaaagacaaatgttagcatataagatgttgtt 28389216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 186 - 232
Target Start/End: Original strand, 44856419 - 44856465
Alignment:
Q  186 tttttaactaatatataaatacaaatgttagcatataagatgttgtt 232  Q
    ||||||||||| ||||||||||||||||||| || ||||||||||||    
T  44856419 tttttaactaacatataaatacaaatgttagtatgtaagatgttgtt 44856465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 184 - 233
Target Start/End: Complemental strand, 3020392 - 3020343
Alignment:
Q  184 attttttaactaatatataaatacaaatgttagcatataagatgttgttt 233  Q
    |||||||||| |||||||||||| ||||||| |||||||| |||||||||    
T  3020392 attttttaaccaatatataaatataaatgttcgcatataatatgttgttt 3020343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 182 - 231
Target Start/End: Complemental strand, 19327523 - 19327474
Alignment:
Q  182 atattttttaactaatatataaatacaaatgttagcatataagatgttgt 231  Q
    ||||||||||||||||| ||| ||||||||||||| || |||||||||||    
T  19327523 atattttttaactaatagatagatacaaatgttaggatctaagatgttgt 19327474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 176 - 233
Target Start/End: Original strand, 21005356 - 21005413
Alignment:
Q  176 ttgacaatattttttaactaatatataaatacaaatgttagcatataagatgttgttt 233  Q
    ||||| ||| ||||||| ||||||||||||| |||| ||||||| |||||||||||||    
T  21005356 ttgaccatactttttaattaatatataaatataaatattagcatgtaagatgttgttt 21005413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 176 - 233
Target Start/End: Original strand, 36227608 - 36227665
Alignment:
Q  176 ttgacaatattttttaactaatatataaatacaaatgttagcatataagatgttgttt 233  Q
    ||||| |||||||| || |||| ||||||||||||| ||||||| |||||||||||||    
T  36227608 ttgaccatatttttcaattaatgtataaatacaaatattagcatgtaagatgttgttt 36227665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 176 - 232
Target Start/End: Original strand, 44561847 - 44561903
Alignment:
Q  176 ttgacaatattttttaactaatatataaatacaaatgttagcatataagatgttgtt 232  Q
    ||||| ||| ||||||||||| |||||||||||||||||  ||| ||||||||||||    
T  44561847 ttgaccatactttttaactaacatataaatacaaatgttgacatgtaagatgttgtt 44561903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 182 - 229
Target Start/End: Complemental strand, 47164646 - 47164598
Alignment:
Q  182 atattttttaactaatatat-aaatacaaatgttagcatataagatgtt 229  Q
    |||||||||||||||||||| ||||||||||||||| || |||||||||    
T  47164646 atattttttaactaatatataaaatacaaatgttagtatgtaagatgtt 47164598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 185 - 233
Target Start/End: Complemental strand, 48334710 - 48334663
Alignment:
Q  185 ttttttaactaatatataaatacaaatgttagcatataagatgttgttt 233  Q
    ||||||||||| ||||||||||||||| ||||||| |||||||||||||    
T  48334710 ttttttaacta-tatataaatacaaatattagcatgtaagatgttgttt 48334663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 183 - 233
Target Start/End: Original strand, 22786700 - 22786748
Alignment:
Q  183 tattttttaactaatatataaatacaaatgttagcatataagatgttgttt 233  Q
    |||||||||||||||||||||  ||||||||| |||| |||||||||||||    
T  22786700 tattttttaactaatatataa--acaaatgtttgcatgtaagatgttgttt 22786748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 182 - 229
Target Start/End: Original strand, 25527473 - 25527520
Alignment:
Q  182 atattttttaactaatatataaatacaaatgttagcatataagatgtt 229  Q
    ||||||||||||| |||||||||||||||| ||| ||| |||||||||    
T  25527473 atattttttaactgatatataaatacaaatattaacatgtaagatgtt 25527520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 186 - 233
Target Start/End: Original strand, 54507714 - 54507761
Alignment:
Q  186 tttttaactaatatataaatacaaatgttagcatataagatgttgttt 233  Q
    |||||||||||| |||||||||| || ||||||| |||||||||||||    
T  54507714 tttttaactaatgtataaatacagatattagcatgtaagatgttgttt 54507761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 176 - 229
Target Start/End: Complemental strand, 3430473 - 3430420
Alignment:
Q  176 ttgacaatattttttaactaatatataaatacaaatgttagcatataagatgtt 229  Q
    ||||| |||||||||||||||||||| |||| |||| ||||||| ||| |||||    
T  3430473 ttgaccatattttttaactaatatattaataaaaatattagcatgtaaaatgtt 3430420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 182 - 215
Target Start/End: Complemental strand, 15664138 - 15664105
Alignment:
Q  182 atattttttaactaatatataaatacaaatgtta 215  Q
    ||||||||||| ||||||||||||||||||||||    
T  15664138 atattttttaattaatatataaatacaaatgtta 15664105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 176 - 233
Target Start/End: Original strand, 52167272 - 52167329
Alignment:
Q  176 ttgacaatattttttaactaatatataaatacaaatgttagcatataagatgttgttt 233  Q
    ||||| ||| ||||||| |||||||||||||||||| |||  || |||||||||||||    
T  52167272 ttgaccatactttttaattaatatataaatacaaatattaatatgtaagatgttgttt 52167329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 183 - 215
Target Start/End: Complemental strand, 14412287 - 14412255
Alignment:
Q  183 tattttttaactaatatataaatacaaatgtta 215  Q
    |||||||||||||||||||||||||||| ||||    
T  14412287 tattttttaactaatatataaatacaaacgtta 14412255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 185 - 233
Target Start/End: Original strand, 33803594 - 33803642
Alignment:
Q  185 ttttttaactaatatataaatacaaatgttagcatataagatgttgttt 233  Q
    ||||||||||||| |||||||| |||| ||||| | |||||||||||||    
T  33803594 ttttttaactaatgtataaatataaatattagcttgtaagatgttgttt 33803642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 185 - 233
Target Start/End: Complemental strand, 43181545 - 43181497
Alignment:
Q  185 ttttttaactaatatataaatacaaatgttagcatataagatgttgttt 233  Q
    ||||||||||||| |||||||| |||| |||| || |||||||||||||    
T  43181545 ttttttaactaatgtataaatataaatattagtatgtaagatgttgttt 43181497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 48; Significance: 2e-18; HSPs: 38)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 182 - 233
Target Start/End: Complemental strand, 22575780 - 22575729
Alignment:
Q  182 atattttttaactaatatataaatacaaatgttagcatataagatgttgttt 233  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  22575780 atattttttaactaatatataaatacaaatgttagcatgtaagatgttgttt 22575729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 182 - 232
Target Start/End: Complemental strand, 44647906 - 44647856
Alignment:
Q  182 atattttttaactaatatataaatacaaatgttagcatataagatgttgtt 232  Q
    |||||||||||| ||||||||||||||||||||||||| ||||||||||||    
T  44647906 atattttttaacaaatatataaatacaaatgttagcatgtaagatgttgtt 44647856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 176 - 233
Target Start/End: Complemental strand, 6402609 - 6402552
Alignment:
Q  176 ttgacaatattttttaactaatatataaatacaaatgttagcatataagatgttgttt 233  Q
    ||||| ||| |||||||||||||||||||||||||| ||||||| |||||||||||||    
T  6402609 ttgaccatactttttaactaatatataaatacaaatattagcatgtaagatgttgttt 6402552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 176 - 233
Target Start/End: Complemental strand, 11641266 - 11641209
Alignment:
Q  176 ttgacaatattttttaactaatatataaatacaaatgttagcatataagatgttgttt 233  Q
    ||||| ||| |||||||||||||||||||||||||| ||||||| |||||||||||||    
T  11641266 ttgaccatactttttaactaatatataaatacaaatattagcatgtaagatgttgttt 11641209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 176 - 229
Target Start/End: Complemental strand, 30385344 - 30385291
Alignment:
Q  176 ttgacaatattttttaactaatatataaatacaaatgttagcatataagatgtt 229  Q
    ||||| ||||||||||||||||||||||||||||||||||| || |||||||||    
T  30385344 ttgaccatattttttaactaatatataaatacaaatgttagtatgtaagatgtt 30385291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 176 - 233
Target Start/End: Original strand, 31444986 - 31445043
Alignment:
Q  176 ttgacaatattttttaactaatatataaatacaaatgttagcatataagatgttgttt 233  Q
    ||||| ||||||||||||||||||||||| ||||||||| |||| |||||||||||||    
T  31444986 ttgaccatattttttaactaatatataaacacaaatgtttgcatgtaagatgttgttt 31445043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 176 - 233
Target Start/End: Complemental strand, 36757685 - 36757628
Alignment:
Q  176 ttgacaatattttttaactaatatataaatacaaatgttagcatataagatgttgttt 233  Q
    ||||| ||| |||||||||||||||||||||||||| ||||||| |||||||||||||    
T  36757685 ttgaccatactttttaactaatatataaatacaaatattagcatgtaagatgttgttt 36757628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 182 - 233
Target Start/End: Complemental strand, 3485400 - 3485349
Alignment:
Q  182 atattttttaactaatatataaatacaaatgttagcatataagatgttgttt 233  Q
    |||||||||||||||||||||||||||||||||| ||| |||| ||||||||    
T  3485400 atattttttaactaatatataaatacaaatgttatcatgtaaggtgttgttt 3485349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 182 - 233
Target Start/End: Complemental strand, 9342838 - 9342787
Alignment:
Q  182 atattttttaactaatatataaatacaaatgttagcatataagatgttgttt 233  Q
    |||||||||||||||| ||||||||||||| ||||||| |||||||||||||    
T  9342838 atattttttaactaatgtataaatacaaatattagcatgtaagatgttgttt 9342787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 176 - 229
Target Start/End: Original strand, 6766435 - 6766488
Alignment:
Q  176 ttgacaatattttttaactaatatataaatacaaatgttagcatataagatgtt 229  Q
    ||||| ||| |||||||||||||||||||||||||| ||||||| |||||||||    
T  6766435 ttgaccatactttttaactaatatataaatacaaatattagcatgtaagatgtt 6766488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 176 - 233
Target Start/End: Complemental strand, 16120639 - 16120582
Alignment:
Q  176 ttgacaatattttttaactaatatataaatacaaatgttagcatataagatgttgttt 233  Q
    ||||| ||| |||||||||||| ||||||||||||| ||||||| |||||||||||||    
T  16120639 ttgaccatactttttaactaatgtataaatacaaatattagcatgtaagatgttgttt 16120582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 176 - 233
Target Start/End: Original strand, 17306017 - 17306074
Alignment:
Q  176 ttgacaatattttttaactaatatataaatacaaatgttagcatataagatgttgttt 233  Q
    ||||| ||| ||||||| |||||||||||||||||| ||||||| |||||||||||||    
T  17306017 ttgactatactttttaattaatatataaatacaaatattagcatgtaagatgttgttt 17306074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 176 - 233
Target Start/End: Original strand, 30003596 - 30003653
Alignment:
Q  176 ttgacaatattttttaactaatatataaatacaaatgttagcatataagatgttgttt 233  Q
    ||||| ||| |||||||||||| ||||||||||||| ||||||| |||||||||||||    
T  30003596 ttgaccatactttttaactaatgtataaatacaaatattagcatgtaagatgttgttt 30003653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 176 - 225
Target Start/End: Original strand, 34634970 - 34635019
Alignment:
Q  176 ttgacaatattttttaactaatatataaatacaaatgttagcatataaga 225  Q
    |||| ||||||||||||||||||||||||||||||||||| ||| |||||    
T  34634970 ttgataatattttttaactaatatataaatacaaatgttaacatgtaaga 34635019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 176 - 233
Target Start/End: Complemental strand, 40771971 - 40771914
Alignment:
Q  176 ttgacaatattttttaactaatatataaatacaaatgttagcatataagatgttgttt 233  Q
    ||||| ||| |||||||||||| ||||||||||||| ||||||| |||||||||||||    
T  40771971 ttgaccatactttttaactaatgtataaatacaaatattagcatgtaagatgttgttt 40771914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 176 - 233
Target Start/End: Complemental strand, 40977687 - 40977630
Alignment:
Q  176 ttgacaatattttttaactaatatataaatacaaatgttagcatataagatgttgttt 233  Q
    ||||| ||| |||||||||||| ||||||||||||| ||||||| |||||||||||||    
T  40977687 ttgaccatactttttaactaatgtataaatacaaatattagcatgtaagatgttgttt 40977630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 176 - 232
Target Start/End: Complemental strand, 28030880 - 28030824
Alignment:
Q  176 ttgacaatattttttaactaatatataaatacaaatgttagcatataagatgttgtt 232  Q
    ||||| ||| ||||||||||| |||||||||||||||||||||| |||||| |||||    
T  28030880 ttgaccatactttttaactaacatataaatacaaatgttagcatgtaagatattgtt 28030824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 185 - 233
Target Start/End: Complemental strand, 40800576 - 40800529
Alignment:
Q  185 ttttttaactaatatataaatacaaatgttagcatataagatgttgttt 233  Q
    ||||||||||||||||||| ||||||||||||||| |||||||||||||    
T  40800576 ttttttaactaatatataa-tacaaatgttagcatgtaagatgttgttt 40800529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 185 - 233
Target Start/End: Complemental strand, 42735355 - 42735307
Alignment:
Q  185 ttttttaactaatatataaatacaaatgttagcatataagatgttgttt 233  Q
    ||||||||||||||||||||||||||| ||||||| ||||||| |||||    
T  42735355 ttttttaactaatatataaatacaaatattagcatgtaagatgatgttt 42735307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 176 - 233
Target Start/End: Original strand, 30701781 - 30701838
Alignment:
Q  176 ttgacaatattttttaactaatatataaatacaaatgttagcatataagatgttgttt 233  Q
    ||||| ||| |||||||||||| ||||||||||||| ||||| | |||||||||||||    
T  30701781 ttgaccataatttttaactaatgtataaatacaaatattagcgtgtaagatgttgttt 30701838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 176 - 233
Target Start/End: Original strand, 36399161 - 36399218
Alignment:
Q  176 ttgacaatattttttaactaatatataaatacaaatgttagcatataagatgttgttt 233  Q
    ||||| ||| |||||||||||| ||||||||||||| ||||| | |||||||||||||    
T  36399161 ttgaccataatttttaactaatgtataaatacaaatattagcgtgtaagatgttgttt 36399218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 176 - 233
Target Start/End: Complemental strand, 42788741 - 42788684
Alignment:
Q  176 ttgacaatattttttaactaatatataaatacaaatgttagcatataagatgttgttt 233  Q
    ||||| ||| |||||||||||| ||||||||||||| || |||| |||||||||||||    
T  42788741 ttgaccatactttttaactaatgtataaatacaaatatttgcatgtaagatgttgttt 42788684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 182 - 219
Target Start/End: Complemental strand, 44644548 - 44644511
Alignment:
Q  182 atattttttaactaatatataaatacaaatgttagcat 219  Q
    |||||||||||| |||||||||||||||||||||||||    
T  44644548 atattttttaacaaatatataaatacaaatgttagcat 44644511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 185 - 233
Target Start/End: Complemental strand, 15382616 - 15382568
Alignment:
Q  185 ttttttaactaatatataaatacaaatgttagcatataagatgttgttt 233  Q
    |||||||| |||||||||||||||||| |||| || |||||||||||||    
T  15382616 ttttttaaataatatataaatacaaatattagtatgtaagatgttgttt 15382568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 186 - 233
Target Start/End: Complemental strand, 7568675 - 7568628
Alignment:
Q  186 tttttaactaatatataaatacaaatgttagcatataagatgttgttt 233  Q
    ||||||||||||||||||||| |||||||||  | |||||||||||||    
T  7568675 tttttaactaatatataaatataaatgttagtgtgtaagatgttgttt 7568628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 186 - 233
Target Start/End: Original strand, 24321334 - 24321381
Alignment:
Q  186 tttttaactaatatataaatacaaatgttagcatataagatgttgttt 233  Q
    |||||||||||| ||||||||||||| ||||||| |||||| ||||||    
T  24321334 tttttaactaatgtataaatacaaatattagcatgtaagatattgttt 24321381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 186 - 229
Target Start/End: Complemental strand, 38153466 - 38153423
Alignment:
Q  186 tttttaactaatatataaatacaaatgttagcatataagatgtt 229  Q
    ||||||||||| |||||||||||||||||| ||| |||||||||    
T  38153466 tttttaactaacatataaatacaaatgttatcatgtaagatgtt 38153423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 182 - 225
Target Start/End: Original strand, 48375071 - 48375114
Alignment:
Q  182 atattttttaactaatatataaatacaaatgttagcatataaga 225  Q
    |||||||||||||||| ||||||||||||| ||||||| |||||    
T  48375071 atattttttaactaatttataaatacaaatattagcatgtaaga 48375114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 186 - 232
Target Start/End: Original strand, 9881349 - 9881395
Alignment:
Q  186 tttttaactaatatataaatacaaatgttagcatataagatgttgtt 232  Q
    ||||||||||||||||| ||| |||||||| ||| ||||||||||||    
T  9881349 tttttaactaatatatacatataaatgttatcatgtaagatgttgtt 9881395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 182 - 232
Target Start/End: Complemental strand, 19711885 - 19711835
Alignment:
Q  182 atattttttaactaatatataaatacaaatgttagcatataagatgttgtt 232  Q
    ||||||||||||||| |||||||||||| || |||||| ||||||| ||||    
T  19711885 atattttttaactaacatataaatacaagtgatagcatgtaagatgctgtt 19711835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 185 - 219
Target Start/End: Original strand, 25695472 - 25695506
Alignment:
Q  185 ttttttaactaatatataaatacaaatgttagcat 219  Q
    |||||||||||||||||||||| ||||||||||||    
T  25695472 ttttttaactaatatataaatataaatgttagcat 25695506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 186 - 232
Target Start/End: Complemental strand, 50972823 - 50972777
Alignment:
Q  186 tttttaactaatatataaatacaaatgttagcatataagatgttgtt 232  Q
    ||||||| |||||||||||||||||||||| ||||||| || |||||    
T  50972823 tttttaaataatatataaatacaaatgttaacatataaaatattgtt 50972777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 176 - 229
Target Start/End: Original strand, 4302181 - 4302234
Alignment:
Q  176 ttgacaatattttttaactaatatataaatacaaatgttagcatataagatgtt 229  Q
    |||| ||| ||||||||||||| |||||||| |||| ||||||| |||||||||    
T  4302181 ttgataatgttttttaactaatgtataaatataaatattagcatgtaagatgtt 4302234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 176 - 209
Target Start/End: Complemental strand, 6406151 - 6406118
Alignment:
Q  176 ttgacaatattttttaactaatatataaatacaa 209  Q
    ||||| ||||||||||||||||||||||||||||    
T  6406151 ttgactatattttttaactaatatataaatacaa 6406118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 176 - 229
Target Start/End: Original strand, 27292703 - 27292756
Alignment:
Q  176 ttgacaatattttttaactaatatataaatacaaatgttagcatataagatgtt 229  Q
    ||||| ||| |||||||||||  ||||||||||||| ||||||| |||||||||    
T  27292703 ttgactatactttttaactaaagtataaatacaaatattagcatgtaagatgtt 27292756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 176 - 233
Target Start/End: Original strand, 52024089 - 52024146
Alignment:
Q  176 ttgacaatattttttaactaatatataaatacaaatgttagcatataagatgttgttt 233  Q
    ||||| ||| |||||||||||| |||||||| |||| ||||| | |||||||||||||    
T  52024089 ttgaccataatttttaactaatgtataaatataaatattagcgtgtaagatgttgttt 52024146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 69 - 105
Target Start/End: Complemental strand, 49662532 - 49662496
Alignment:
Q  69 atttgttttagtttaattcagtttatgtgtttttaaa 105  Q
    |||||||||||||| ||||| ||||||||||||||||    
T  49662532 atttgttttagtttgattcaatttatgtgtttttaaa 49662496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 182 - 229
Target Start/End: Complemental strand, 51021056 - 51021008
Alignment:
Q  182 atattttttaactaatatataa-atacaaatgttagcatataagatgtt 229  Q
    ||||||||||||||||||||||   |||||||||||||| |||||||||    
T  51021056 atattttttaactaatatataatgcacaaatgttagcatgtaagatgtt 51021008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 47; Significance: 6e-18; HSPs: 34)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 182 - 232
Target Start/End: Original strand, 18090397 - 18090447
Alignment:
Q  182 atattttttaactaatatataaatacaaatgttagcatataagatgttgtt 232  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  18090397 atattttttaactaatatataaatataaatgttagcatataagatgttgtt 18090447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 175 - 233
Target Start/End: Original strand, 18035162 - 18035220
Alignment:
Q  175 attgacaatattttttaactaatatataaatacaaatgttagcatataagatgttgttt 233  Q
    |||||| ||| |||||||||||||||||||| ||||||||||||| |||||||||||||    
T  18035162 attgaccataatttttaactaatatataaatgcaaatgttagcatgtaagatgttgttt 18035220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 183 - 233
Target Start/End: Complemental strand, 40716715 - 40716665
Alignment:
Q  183 tattttttaactaatatataaatacaaatgttagcatataagatgttgttt 233  Q
    ||||||||||||||||||||||||||||| ||||||| |||||||||||||    
T  40716715 tattttttaactaatatataaatacaaattttagcatgtaagatgttgttt 40716665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 176 - 233
Target Start/End: Original strand, 616846 - 616903
Alignment:
Q  176 ttgacaatattttttaactaatatataaatacaaatgttagcatataagatgttgttt 233  Q
    ||||| ||| |||||||||||||||||||||||||| ||||||| |||||||||||||    
T  616846 ttgaccatactttttaactaatatataaatacaaatattagcatgtaagatgttgttt 616903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 176 - 233
Target Start/End: Original strand, 623239 - 623296
Alignment:
Q  176 ttgacaatattttttaactaatatataaatacaaatgttagcatataagatgttgttt 233  Q
    ||||| ||| |||||||||||||||||||||||||| ||||||| |||||||||||||    
T  623239 ttgaccatactttttaactaatatataaatacaaatattagcatgtaagatgttgttt 623296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 176 - 233
Target Start/End: Original strand, 14237343 - 14237400
Alignment:
Q  176 ttgacaatattttttaactaatatataaatacaaatgttagcatataagatgttgttt 233  Q
    ||||| |||||||||||||||| ||||||||||||| ||||||| |||||||||||||    
T  14237343 ttgaccatattttttaactaatgtataaatacaaatattagcatgtaagatgttgttt 14237400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 176 - 233
Target Start/End: Original strand, 18044488 - 18044545
Alignment:
Q  176 ttgacaatattttttaactaatatataaatacaaatgttagcatataagatgttgttt 233  Q
    ||||| |||||||||||||||| ||||||||||||| ||||||| |||||||||||||    
T  18044488 ttgaccatattttttaactaatgtataaatacaaatattagcatgtaagatgttgttt 18044545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 176 - 233
Target Start/End: Original strand, 32998513 - 32998570
Alignment:
Q  176 ttgacaatattttttaactaatatataaatacaaatgttagcatataagatgttgttt 233  Q
    ||||| |||||||||||||||| ||||||||||||| ||||||| |||||||||||||    
T  32998513 ttgaccatattttttaactaatgtataaatacaaatattagcatgtaagatgttgttt 32998570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 176 - 233
Target Start/End: Complemental strand, 33700272 - 33700215
Alignment:
Q  176 ttgacaatattttttaactaatatataaatacaaatgttagcatataagatgttgttt 233  Q
    ||||| ||||||||||||||||||||||||||||||||||| |  |||||||||||||    
T  33700272 ttgaccatattttttaactaatatataaatacaaatgttagtaagtaagatgttgttt 33700215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 176 - 233
Target Start/End: Original strand, 40494447 - 40494504
Alignment:
Q  176 ttgacaatattttttaactaatatataaatacaaatgttagcatataagatgttgttt 233  Q
    ||||| ||| |||||||||||||||||||||||||| ||||||| |||||||||||||    
T  40494447 ttgaccatactttttaactaatatataaatacaaatattagcatgtaagatgttgttt 40494504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 176 - 233
Target Start/End: Original strand, 41263873 - 41263930
Alignment:
Q  176 ttgacaatattttttaactaatatataaatacaaatgttagcatataagatgttgttt 233  Q
    ||||| |||||||||||||||| ||||||||||||| ||||||| |||||||||||||    
T  41263873 ttgaccatattttttaactaatgtataaatacaaatattagcatgtaagatgttgttt 41263930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 182 - 233
Target Start/End: Original strand, 132086 - 132137
Alignment:
Q  182 atattttttaactaatatataaatacaaatgttagcatataagatgttgttt 233  Q
    |||||||||||||||| ||||||||||||| ||||||| |||||||||||||    
T  132086 atattttttaactaatgtataaatacaaatattagcatgtaagatgttgttt 132137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 176 - 233
Target Start/End: Original strand, 38957233 - 38957290
Alignment:
Q  176 ttgacaatattttttaactaatatataaatacaaatgttagcatataagatgttgttt 233  Q
    ||||| |||||||||||||||  ||||||||||||| ||||||| |||||||||||||    
T  38957233 ttgaccatattttttaactaacgtataaatacaaatattagcatgtaagatgttgttt 38957290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 176 - 233
Target Start/End: Complemental strand, 42587447 - 42587390
Alignment:
Q  176 ttgacaatattttttaactaatatataaatacaaatgttagcatataagatgttgttt 233  Q
    ||||| ||| |||||||||||| ||||||||||||| ||||||| |||||||||||||    
T  42587447 ttgaccatactttttaactaatgtataaatacaaatattagcatgtaagatgttgttt 42587390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 182 - 233
Target Start/End: Original strand, 9632224 - 9632275
Alignment:
Q  182 atattttttaactaatatataaatacaaatgttagcatataagatgttgttt 233  Q
    ||||||||| ||||| |||||||||| ||||||||||| |||||||||||||    
T  9632224 atattttttcactaacatataaatactaatgttagcatgtaagatgttgttt 9632275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 186 - 233
Target Start/End: Complemental strand, 33905517 - 33905470
Alignment:
Q  186 tttttaactaatatataaatacaaatgttagcatataagatgttgttt 233  Q
    ||||||||||||||| ||||| |||||||||||||||| |||||||||    
T  33905517 tttttaactaatataaaaatataaatgttagcatataaaatgttgttt 33905470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 186 - 233
Target Start/End: Complemental strand, 36642047 - 36642000
Alignment:
Q  186 tttttaactaatatataaatacaaatgttagcatataagatgttgttt 233  Q
    ||||||||| |||||||||||||||| ||||||| |||||||||||||    
T  36642047 tttttaacttatatataaatacaaatattagcatgtaagatgttgttt 36642000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 182 - 233
Target Start/End: Complemental strand, 40204915 - 40204864
Alignment:
Q  182 atattttttaactaatatataaatacaaatgttagcatataagatgttgttt 233  Q
    ||||||||| |||||||||||||||||||||||||||  |||| ||||||||    
T  40204915 atattttttgactaatatataaatacaaatgttagcaggtaagttgttgttt 40204864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 176 - 230
Target Start/End: Complemental strand, 3100694 - 3100640
Alignment:
Q  176 ttgacaatattttttaactaatatataaatacaaatgttagcatataagatgttg 230  Q
    ||||| ||| |||||||||||| ||||||||||||| ||||||| ||||||||||    
T  3100694 ttgaccatactttttaactaatgtataaatacaaatattagcatgtaagatgttg 3100640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 176 - 226
Target Start/End: Original strand, 5878379 - 5878429
Alignment:
Q  176 ttgacaatattttttaactaatatataaatacaaatgttagcatataagat 226  Q
    ||||| |||||||||||||||| ||||||||||||| ||||||| ||||||    
T  5878379 ttgaccatattttttaactaatgtataaatacaaatattagcatgtaagat 5878429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 176 - 233
Target Start/End: Complemental strand, 2766247 - 2766190
Alignment:
Q  176 ttgacaatattttttaactaatatataaatacaaatgttagcatataagatgttgttt 233  Q
    ||||| ||| |||||||||||| |||||||| |||| ||||||| |||||||||||||    
T  2766247 ttgaccatactttttaactaatgtataaatataaatattagcatgtaagatgttgttt 2766190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 176 - 233
Target Start/End: Complemental strand, 3370455 - 3370398
Alignment:
Q  176 ttgacaatattttttaactaatatataaatacaaatgttagcatataagatgttgttt 233  Q
    ||||| ||||||||||| ||||||||||||||||||||||  || |||||| ||||||    
T  3370455 ttgaccatattttttaattaatatataaatacaaatgttaatatgtaagatattgttt 3370398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 194 - 231
Target Start/End: Original strand, 7430914 - 7430951
Alignment:
Q  194 taatatataaatacaaatgttagcatataagatgttgt 231  Q
    ||||||||||||||||||| ||||||||||||||||||    
T  7430914 taatatataaatacaaatggtagcatataagatgttgt 7430951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 176 - 229
Target Start/End: Complemental strand, 11162457 - 11162405
Alignment:
Q  176 ttgacaatattttttaactaatatataaatacaaatgttagcatataagatgtt 229  Q
    ||||| |||||||||| |||||||||||| ||||||||||||||| ||||||||    
T  11162457 ttgaccatatttttta-ctaatatataaagacaaatgttagcataaaagatgtt 11162405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 197 - 233
Target Start/End: Complemental strand, 32855640 - 32855604
Alignment:
Q  197 tatataaatacaaatgttagcatataagatgttgttt 233  Q
    ||||||||||||||||||||||| |||||||||||||    
T  32855640 tatataaatacaaatgttagcatgtaagatgttgttt 32855604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 176 - 231
Target Start/End: Complemental strand, 4270291 - 4270236
Alignment:
Q  176 ttgacaatattttttaactaatatataaatacaaatgttagcatataagatgttgt 231  Q
    ||||| |||||||||||||||| ||||||||||||| ||| ||| ||| |||||||    
T  4270291 ttgaccatattttttaactaatgtataaatacaaatattaacatgtaatatgttgt 4270236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 182 - 229
Target Start/End: Original strand, 5173320 - 5173367
Alignment:
Q  182 atattttttaactaatatataaatacaaatgttagcatataagatgtt 229  Q
    ||||| |||||||||||||||||||||||| ||| ||| |||||||||    
T  5173320 atattatttaactaatatataaatacaaatattaacatgtaagatgtt 5173367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 186 - 233
Target Start/End: Original strand, 38497145 - 38497192
Alignment:
Q  186 tttttaactaatatataaatacaaatgttagcatataagatgttgttt 233  Q
    |||||||||||| ||||||||||||| |||||||  ||||||||||||    
T  38497145 tttttaactaatgtataaatacaaatattagcatggaagatgttgttt 38497192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 176 - 226
Target Start/End: Complemental strand, 10982689 - 10982639
Alignment:
Q  176 ttgacaatattttttaactaatatataaatacaaatgttagcatataagat 226  Q
    ||||| |||||||||||| |||||||||| |||||| |||| |||||||||    
T  10982689 ttgaccatattttttaaccaatatataaaaacaaatattagtatataagat 10982639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 176 - 233
Target Start/End: Original strand, 18020929 - 18020989
Alignment:
Q  176 ttgacaatattttttaactaatatataaatacaaa---tgttagcatataagatgttgttt 233  Q
    ||||| ||||||||||||||||||| |||||||||   ||||||||| |||||| ||||||    
T  18020929 ttgaccatattttttaactaatatacaaatacaaaatgtgttagcatgtaagatattgttt 18020989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 184 - 233
Target Start/End: Original strand, 8394417 - 8394466
Alignment:
Q  184 attttttaactaatatataaatacaaatgttagcatataagatgttgttt 233  Q
    |||||||||||||| ||||| ||||||| |||| || |||||||||||||    
T  8394417 attttttaactaatgtataagtacaaatattagtatttaagatgttgttt 8394466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 176 - 233
Target Start/End: Complemental strand, 13216920 - 13216863
Alignment:
Q  176 ttgacaatattttttaactaatatataaatacaaatgttagcatataagatgttgttt 233  Q
    ||||| ||| |||||||||||| |||||||| |||| |||||||  ||||||||||||    
T  13216920 ttgaccatactttttaactaatgtataaatataaatattagcatgaaagatgttgttt 13216863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 176 - 233
Target Start/End: Original strand, 35403579 - 35403636
Alignment:
Q  176 ttgacaatattttttaactaatatataaatacaaatgttagcatataagatgttgttt 233  Q
    ||||| ||| |||||||||||| |||||||||| || ||| ||| |||||||||||||    
T  35403579 ttgaccatactttttaactaatgtataaatacagatattaacatgtaagatgttgttt 35403636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 190 - 218
Target Start/End: Complemental strand, 28724037 - 28724009
Alignment:
Q  190 taactaatatataaatacaaatgttagca 218  Q
    |||||||||||||||||||||||||||||    
T  28724037 taactaatatataaatacaaatgttagca 28724009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0225 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold0225
Description:

Target: scaffold0225; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 184 - 233
Target Start/End: Complemental strand, 9024 - 8975
Alignment:
Q  184 attttttaactaatatataaatacaaatgttagcatataagatgttgttt 233  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||    
T  9024 attttttaactaatatataaatacaaatgttagcatgtaagatgttgttt 8975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 184 - 233
Target Start/End: Complemental strand, 138221 - 138172
Alignment:
Q  184 attttttaactaatatataaatacaaatgttagcatataagatgttgttt 233  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||    
T  138221 attttttaactaatatataaatacaaatgttagcatgtaagatgttgttt 138172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 46; Significance: 2e-17; HSPs: 35)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 176 - 233
Target Start/End: Complemental strand, 24992337 - 24992280
Alignment:
Q  176 ttgacaatattttttaactaatatataaatacaaatgttagcatataagatgttgttt 233  Q
    ||||| |||||||||||||||| ||||||||||||| |||||||||||||||||||||    
T  24992337 ttgaccatattttttaactaatttataaatacaaatattagcatataagatgttgttt 24992280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 182 - 230
Target Start/End: Original strand, 32017282 - 32017330
Alignment:
Q  182 atattttttaactaatatataaatacaaatgttagcatataagatgttg 230  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||    
T  32017282 atattttttaactaatatataaatacaaatgttagcatgtaagatgttg 32017330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 182 - 233
Target Start/End: Original strand, 18998756 - 18998807
Alignment:
Q  182 atattttttaactaatatataaatacaaatgttagcatataagatgttgttt 233  Q
    ||||||||||||||||||||||||||||||||||| || |||||||||||||    
T  18998756 atattttttaactaatatataaatacaaatgttagtatgtaagatgttgttt 18998807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 176 - 233
Target Start/End: Original strand, 978140 - 978197
Alignment:
Q  176 ttgacaatattttttaactaatatataaatacaaatgttagcatataagatgttgttt 233  Q
    ||||| ||| |||||||||||||||||||||||||| ||||||| |||||||||||||    
T  978140 ttgaccatactttttaactaatatataaatacaaatattagcatgtaagatgttgttt 978197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 185 - 230
Target Start/End: Complemental strand, 3422400 - 3422355
Alignment:
Q  185 ttttttaactaatatataaatacaaatgttagcatataagatgttg 230  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||    
T  3422400 ttttttaactaatatataaatacaaatgttagcatgtaagatgttg 3422355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 176 - 233
Target Start/End: Complemental strand, 9502826 - 9502769
Alignment:
Q  176 ttgacaatattttttaactaatatataaatacaaatgttagcatataagatgttgttt 233  Q
    ||||| ||| |||||||||||||||||||||||||| ||||||| |||||||||||||    
T  9502826 ttgaccatactttttaactaatatataaatacaaatattagcatgtaagatgttgttt 9502769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 176 - 233
Target Start/End: Original strand, 11761129 - 11761186
Alignment:
Q  176 ttgacaatattttttaactaatatataaatacaaatgttagcatataagatgttgttt 233  Q
    ||||| |||||||||||||||||||||||||||||| ||| ||| |||||||||||||    
T  11761129 ttgaccatattttttaactaatatataaatacaaatattaacatgtaagatgttgttt 11761186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 176 - 233
Target Start/End: Complemental strand, 14634356 - 14634299
Alignment:
Q  176 ttgacaatattttttaactaatatataaatacaaatgttagcatataagatgttgttt 233  Q
    ||||| ||| |||||||||||||||||||||||||| ||||||| |||||||||||||    
T  14634356 ttgactatactttttaactaatatataaatacaaatattagcatgtaagatgttgttt 14634299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 176 - 233
Target Start/End: Original strand, 33387283 - 33387340
Alignment:
Q  176 ttgacaatattttttaactaatatataaatacaaatgttagcatataagatgttgttt 233  Q
    ||||| ||| |||||||||||||||||||||||||| ||||||| |||||||||||||    
T  33387283 ttgactatactttttaactaatatataaatacaaatattagcatgtaagatgttgttt 33387340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 185 - 229
Target Start/End: Original strand, 17476949 - 17476993
Alignment:
Q  185 ttttttaactaatatataaatacaaatgttagcatataagatgtt 229  Q
    |||||||||||||||||||||||||||||||| ||||||||||||    
T  17476949 ttttttaactaatatataaatacaaatgttagtatataagatgtt 17476993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 185 - 233
Target Start/End: Complemental strand, 24916436 - 24916388
Alignment:
Q  185 ttttttaactaatatataaatacaaatgttagcatataagatgttgttt 233  Q
    ||||||||||||| ||||||||||||| |||||||||||||||||||||    
T  24916436 ttttttaactaatttataaatacaaatattagcatataagatgttgttt 24916388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 182 - 226
Target Start/End: Complemental strand, 27579623 - 27579579
Alignment:
Q  182 atattttttaactaatatataaatacaaatgttagcatataagat 226  Q
    |||||||||||||||||||||||||||||||||||||| ||||||    
T  27579623 atattttttaactaatatataaatacaaatgttagcatgtaagat 27579579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 185 - 233
Target Start/End: Original strand, 32400399 - 32400447
Alignment:
Q  185 ttttttaactaatatataaatacaaatgttagcatataagatgttgttt 233  Q
    ||||||||||||||||||||||||||| ||||||| |||||||||||||    
T  32400399 ttttttaactaatatataaatacaaatattagcatgtaagatgttgttt 32400447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 182 - 233
Target Start/End: Complemental strand, 12456833 - 12456782
Alignment:
Q  182 atattttttaactaatatataaatacaaatgttagcatataagatgttgttt 233  Q
    ||||||||||||||||||| ||||||||||||||| || |||||||||||||    
T  12456833 atattttttaactaatatacaaatacaaatgttagtatgtaagatgttgttt 12456782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 182 - 233
Target Start/End: Complemental strand, 26387072 - 26387021
Alignment:
Q  182 atattttttaactaatatataaatacaaatgttagcatataagatgttgttt 233  Q
    ||||||||||||||| ||||||||| |||||||||||| |||||||||||||    
T  26387072 atattttttaactaacatataaatataaatgttagcatttaagatgttgttt 26387021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 187 - 233
Target Start/End: Complemental strand, 30355062 - 30355016
Alignment:
Q  187 ttttaactaatatataaatacaaatgttagcatataagatgttgttt 233  Q
    ||||||||||||||||||||||||| ||||||| |||||||||||||    
T  30355062 ttttaactaatatataaatacaaatattagcatgtaagatgttgttt 30355016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 176 - 233
Target Start/End: Complemental strand, 3472476 - 3472419
Alignment:
Q  176 ttgacaatattttttaactaatatataaatacaaatgttagcatataagatgttgttt 233  Q
    ||||| ||||||||||||||||  |||||||||||| ||||||| |||||||||||||    
T  3472476 ttgaccatattttttaactaatgaataaatacaaatattagcatgtaagatgttgttt 3472419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 176 - 233
Target Start/End: Complemental strand, 8086229 - 8086172
Alignment:
Q  176 ttgacaatattttttaactaatatataaatacaaatgttagcatataagatgttgttt 233  Q
    ||||| ||| |||||||||||||||||||||||||| ||| ||| |||||||||||||    
T  8086229 ttgactatactttttaactaatatataaatacaaatattaacatgtaagatgttgttt 8086172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 176 - 233
Target Start/End: Complemental strand, 33587668 - 33587611
Alignment:
Q  176 ttgacaatattttttaactaatatataaatacaaatgttagcatataagatgttgttt 233  Q
    ||||| |||||||||||||||| ||||||||||||| ||| ||| |||||||||||||    
T  33587668 ttgaccatattttttaactaatctataaatacaaatattaacatgtaagatgttgttt 33587611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 185 - 233
Target Start/End: Complemental strand, 12360011 - 12359963
Alignment:
Q  185 ttttttaactaatatataaatacaaatgttagcatataagatgttgttt 233  Q
    |||||||||||||||||||||||||||||||||||  ||||| ||||||    
T  12360011 ttttttaactaatatataaatacaaatgttagcatgaaagatattgttt 12359963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 186 - 233
Target Start/End: Complemental strand, 9050765 - 9050718
Alignment:
Q  186 tttttaactaatatataaatacaaatgttagcatataagatgttgttt 233  Q
    |||||||||||| ||||||||||||| ||||||| |||||||||||||    
T  9050765 tttttaactaatgtataaatacaaatattagcatgtaagatgttgttt 9050718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 186 - 233
Target Start/End: Complemental strand, 18094270 - 18094223
Alignment:
Q  186 tttttaactaatatataaatacaaatgttagcatataagatgttgttt 233  Q
    |||||||||||| ||||||||||||| ||||||| |||||||||||||    
T  18094270 tttttaactaatgtataaatacaaatattagcatgtaagatgttgttt 18094223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 194 - 232
Target Start/End: Complemental strand, 2825302 - 2825264
Alignment:
Q  194 taatatataaatacaaatgttagcatataagatgttgtt 232  Q
    ||||||||||||| |||||||||||||||||||||||||    
T  2825302 taatatataaatagaaatgttagcatataagatgttgtt 2825264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 176 - 229
Target Start/End: Complemental strand, 5947750 - 5947697
Alignment:
Q  176 ttgacaatattttttaactaatatataaatacaaatgttagcatataagatgtt 229  Q
    |||||||||||||||| |||| |||||||||||||| | ||||||||| |||||    
T  5947750 ttgacaatattttttagctaacatataaatacaaatctaagcatataaaatgtt 5947697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 176 - 229
Target Start/End: Complemental strand, 38916449 - 38916396
Alignment:
Q  176 ttgacaatattttttaactaatatataaatacaaatgttagcatataagatgtt 229  Q
    ||||| ||| ||||||||||| |||||||||||||||||||||| | |||||||    
T  38916449 ttgaccatactttttaactaacatataaatacaaatgttagcatgtgagatgtt 38916396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 182 - 222
Target Start/End: Original strand, 4671278 - 4671318
Alignment:
Q  182 atattttttaactaatatataaatacaaatgttagcatata 222  Q
    ||||||||||||| ||||||||||||||||| |||||||||    
T  4671278 atattttttaactgatatataaatacaaatgatagcatata 4671318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 182 - 233
Target Start/End: Original strand, 6996049 - 6996100
Alignment:
Q  182 atattttttaactaatatataaatacaaatgttagcatataagatgttgttt 233  Q
    ||||||||||||||||||||||||| |||||||| ||| ||| || ||||||    
T  6996049 atattttttaactaatatataaatataaatgttaccatgtaaaatattgttt 6996100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 186 - 233
Target Start/End: Complemental strand, 12007821 - 12007774
Alignment:
Q  186 tttttaactaatatataaatacaaatgttagcatataagatgttgttt 233  Q
    ||||||| ||||||||||||||||||| |||||| ||| |||||||||    
T  12007821 tttttaattaatatataaatacaaatgctagcatgtaaaatgttgttt 12007774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 176 - 215
Target Start/End: Complemental strand, 31197889 - 31197850
Alignment:
Q  176 ttgacaatattttttaactaatatataaatacaaatgtta 215  Q
    ||||||||| ||||||||||| ||||||||||||||||||    
T  31197889 ttgacaataatttttaactaaaatataaatacaaatgtta 31197850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 186 - 233
Target Start/End: Original strand, 40156271 - 40156318
Alignment:
Q  186 tttttaactaatatataaatacaaatgttagcatataagatgttgttt 233  Q
    ||||||| |||| ||||||||||||| ||||||| |||||||||||||    
T  40156271 tttttaattaatgtataaatacaaatattagcatgtaagatgttgttt 40156318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 176 - 233
Target Start/End: Original strand, 7224228 - 7224285
Alignment:
Q  176 ttgacaatattttttaactaatatataaatacaaatgttagcatataagatgttgttt 233  Q
    ||||| ||| ||| |||||||| ||||||||||||| ||||||| ||| |||||||||    
T  7224228 ttgaccatactttctaactaatttataaatacaaatattagcatgtaaaatgttgttt 7224285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 183 - 232
Target Start/End: Complemental strand, 10822287 - 10822238
Alignment:
Q  183 tattttttaactaatatataaatacaaatgttagcatataagatgttgtt 232  Q
    ||||||||||||||| |||  || ||||||||| ||||||||||||||||    
T  10822287 tattttttaactaatgtattgatgcaaatgttaacatataagatgttgtt 10822238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 176 - 229
Target Start/End: Original strand, 11251177 - 11251230
Alignment:
Q  176 ttgacaatattttttaactaatatataaatacaaatgttagcatataagatgtt 229  Q
    ||||| ||| |||||||||||| ||||||||||||| ||||||| || ||||||    
T  11251177 ttgaccatactttttaactaatgtataaatacaaatattagcatgtacgatgtt 11251230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 182 - 211
Target Start/End: Original strand, 37495679 - 37495708
Alignment:
Q  182 atattttttaactaatatataaatacaaat 211  Q
    ||||||||||||||||||||||||||||||    
T  37495679 atattttttaactaatatataaatacaaat 37495708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 175 - 231
Target Start/End: Complemental strand, 29492444 - 29492388
Alignment:
Q  175 attgacaatattttttaactaatatataaatacaaatgttagcatataagatgttgt 231  Q
    |||||| ||||||||| ||||| ||||||| | ||||| ||||||||||||| ||||    
T  29492444 attgaccatattttttgactaaaatataaagataaatggtagcatataagatattgt 29492388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 45; Significance: 9e-17; HSPs: 2)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 185 - 233
Target Start/End: Complemental strand, 217065 - 217017
Alignment:
Q  185 ttttttaactaatatataaatacaaatgttagcatataagatgttgttt 233  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||    
T  217065 ttttttaagtaatatataaatacaaatgttagcatataagatgttgttt 217017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 182 - 233
Target Start/End: Complemental strand, 53613 - 53562
Alignment:
Q  182 atattttttaactaatatataaatacaaatgttagcatataagatgttgttt 233  Q
    |||||||||||||||||||||| ||||||| |||||||  ||||||||||||    
T  53613 atattttttaactaatatataattacaaattttagcatgcaagatgttgttt 53562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0595 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0595
Description:

Target: scaffold0595; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 176 - 226
Target Start/End: Original strand, 4011 - 4061
Alignment:
Q  176 ttgacaatattttttaactaatatataaatacaaatgttagcatataagat 226  Q
    ||||| |||||||||||||||||||||||||||||||||||||| ||||||    
T  4011 ttgaccatattttttaactaatatataaatacaaatgttagcatgtaagat 4061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0262 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold0262
Description:

Target: scaffold0262; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 184 - 233
Target Start/End: Original strand, 22851 - 22900
Alignment:
Q  184 attttttaactaatatataaatacaaatgttagcatataagatgttgttt 233  Q
    ||||||||||| |||||||||||||||||||||||| |||||||||||||    
T  22851 attttttaactcatatataaatacaaatgttagcatgtaagatgttgttt 22900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0099 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold0099
Description:

Target: scaffold0099; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 176 - 229
Target Start/End: Complemental strand, 28851 - 28798
Alignment:
Q  176 ttgacaatattttttaactaatatataaatacaaatgttagcatataagatgtt 229  Q
    ||||| |||||||||||||||| ||||||||||||| |||||||||||||||||    
T  28851 ttgaccatattttttaactaatttataaatacaaatattagcatataagatgtt 28798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 35)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 176 - 233
Target Start/End: Original strand, 6563289 - 6563346
Alignment:
Q  176 ttgacaatattttttaactaatatataaatacaaatgttagcatataagatgttgttt 233  Q
    ||||| ||| |||||||||||||||||||||||||| ||||||| |||||||||||||    
T  6563289 ttgaccatactttttaactaatatataaatacaaatattagcatgtaagatgttgttt 6563346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 176 - 233
Target Start/End: Original strand, 15337551 - 15337608
Alignment:
Q  176 ttgacaatattttttaactaatatataaatacaaatgttagcatataagatgttgttt 233  Q
    ||||| |||||||||||||||||||||||||||||| ||||||| ||| |||||||||    
T  15337551 ttgaccatattttttaactaatatataaatacaaatattagcatgtaaaatgttgttt 15337608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 176 - 233
Target Start/End: Complemental strand, 18668887 - 18668830
Alignment:
Q  176 ttgacaatattttttaactaatatataaatacaaatgttagcatataagatgttgttt 233  Q
    ||||| |||||||||||||||| ||||||||||||| ||||||| |||||||||||||    
T  18668887 ttgaccatattttttaactaatgtataaatacaaatattagcatgtaagatgttgttt 18668830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 184 - 233
Target Start/End: Complemental strand, 23158100 - 23158051
Alignment:
Q  184 attttttaactaatatataaatacaaatgttagcatataagatgttgttt 233  Q
    |||||||||||||||||||||||||||||||| ||| |||||||||||||    
T  23158100 attttttaactaatatataaatacaaatgttaacatgtaagatgttgttt 23158051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 176 - 233
Target Start/End: Complemental strand, 24624140 - 24624083
Alignment:
Q  176 ttgacaatattttttaactaatatataaatacaaatgttagcatataagatgttgttt 233  Q
    ||||| ||| |||||||||||||||||||||||||| ||||||| |||||||||||||    
T  24624140 ttgaccatactttttaactaatatataaatacaaatattagcatgtaagatgttgttt 24624083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 176 - 229
Target Start/End: Original strand, 31869771 - 31869824
Alignment:
Q  176 ttgacaatattttttaactaatatataaatacaaatgttagcatataagatgtt 229  Q
    ||||| || ||||||||||||||||||||||||||||||||||| |||||||||    
T  31869771 ttgaccattttttttaactaatatataaatacaaatgttagcatgtaagatgtt 31869824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 176 - 233
Target Start/End: Complemental strand, 32414878 - 32414821
Alignment:
Q  176 ttgacaatattttttaactaatatataaatacaaatgttagcatataagatgttgttt 233  Q
    ||||| ||| |||||||||||||||||||||||||| ||||||| |||||||||||||    
T  32414878 ttgaccatactttttaactaatatataaatacaaatattagcatgtaagatgttgttt 32414821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 185 - 233
Target Start/End: Original strand, 5495321 - 5495369
Alignment:
Q  185 ttttttaactaatatataaatacaaatgttagcatataagatgttgttt 233  Q
    ||||||||||||||||||||||||||||||||||| |||||| ||||||    
T  5495321 ttttttaactaatatataaatacaaatgttagcatgtaagattttgttt 5495369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 177 - 229
Target Start/End: Original strand, 8101664 - 8101716
Alignment:
Q  177 tgacaatattttttaactaatatataaatacaaatgttagcatataagatgtt 229  Q
    |||| |||||||||||||||||||||||||||||||||| ||| |||||||||    
T  8101664 tgaccatattttttaactaatatataaatacaaatgttaacatgtaagatgtt 8101716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 186 - 229
Target Start/End: Complemental strand, 3623899 - 3623856
Alignment:
Q  186 tttttaactaatatataaatacaaatgttagcatataagatgtt 229  Q
    |||||||||||||||||||||||||||||||||| |||||||||    
T  3623899 tttttaactaatatataaatacaaatgttagcatgtaagatgtt 3623856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 186 - 233
Target Start/End: Complemental strand, 19088147 - 19088100
Alignment:
Q  186 tttttaactaatatataaatacaaatgttagcatataagatgttgttt 233  Q
    |||||||||||||||||||||||||| ||||||| |||||||||||||    
T  19088147 tttttaactaatatataaatacaaatattagcatgtaagatgttgttt 19088100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 176 - 233
Target Start/End: Original strand, 2360053 - 2360110
Alignment:
Q  176 ttgacaatattttttaactaatatataaatacaaatgttagcatataagatgttgttt 233  Q
    ||||| ||| ||||||||||||||||||||| |||||||||||| ||| |||||||||    
T  2360053 ttgactataatttttaactaatatataaataaaaatgttagcatgtaaaatgttgttt 2360110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 176 - 233
Target Start/End: Original strand, 4147994 - 4148051
Alignment:
Q  176 ttgacaatattttttaactaatatataaatacaaatgttagcatataagatgttgttt 233  Q
    ||||| ||| |||||||||||| ||||||||||||| ||||||| |||||||||||||    
T  4147994 ttgaccatactttttaactaatgtataaatacaaatattagcatgtaagatgttgttt 4148051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 176 - 229
Target Start/End: Complemental strand, 10298772 - 10298719
Alignment:
Q  176 ttgacaatattttttaactaatatataaatacaaatgttagcatataagatgtt 229  Q
    ||||| ||||||||| |||||||||||||||||||||||||||| ||| |||||    
T  10298772 ttgaccatattttttcactaatatataaatacaaatgttagcatgtaaaatgtt 10298719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 176 - 233
Target Start/End: Complemental strand, 17213983 - 17213926
Alignment:
Q  176 ttgacaatattttttaactaatatataaatacaaatgttagcatataagatgttgttt 233  Q
    ||||| ||| |||||||||||| ||||||||||||| ||||||| |||||||||||||    
T  17213983 ttgactatactttttaactaatttataaatacaaatattagcatgtaagatgttgttt 17213926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 176 - 233
Target Start/End: Original strand, 22054835 - 22054892
Alignment:
Q  176 ttgacaatattttttaactaatatataaatacaaatgttagcatataagatgttgttt 233  Q
    ||||| ||| |||||||||||| ||||||||||||| ||||||| |||||||||||||    
T  22054835 ttgaccatactttttaactaatgtataaatacaaatattagcatgtaagatgttgttt 22054892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 176 - 233
Target Start/End: Original strand, 28477816 - 28477873
Alignment:
Q  176 ttgacaatattttttaactaatatataaatacaaatgttagcatataagatgttgttt 233  Q
    ||||| ||| |||||||||||||||||||||||||| ||||||| |||| ||||||||    
T  28477816 ttgaccataatttttaactaatatataaatacaaatattagcatgtaagttgttgttt 28477873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 176 - 231
Target Start/End: Original strand, 1260493 - 1260548
Alignment:
Q  176 ttgacaatattttttaactaatatataaatacaaatgttagcatataagatgttgt 231  Q
    ||||| |||||||||||||||||||||||||||| ||||||||  |||||| ||||    
T  1260493 ttgaccatattttttaactaatatataaatacaattgttagcacgtaagattttgt 1260548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 186 - 233
Target Start/End: Complemental strand, 15383119 - 15383072
Alignment:
Q  186 tttttaactaatatataaatacaaatgttagcatataagatgttgttt 233  Q
    |||||||||||| ||||||||||||| ||||||| |||||||||||||    
T  15383119 tttttaactaatctataaatacaaatattagcatgtaagatgttgttt 15383072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 182 - 233
Target Start/End: Complemental strand, 24955589 - 24955538
Alignment:
Q  182 atattttttaactaatatataaatacaaatgttagcatataagatgttgttt 233  Q
    ||||||||||||||||  |||||||||||| ||||||| |||||||||||||    
T  24955589 atattttttaactaatgaataaatacaaatattagcatgtaagatgttgttt 24955538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 186 - 233
Target Start/End: Original strand, 29790279 - 29790326
Alignment:
Q  186 tttttaactaatatataaatacaaatgttagcatataagatgttgttt 233  Q
    |||||||||||||||||||||||||| ||||||| |||| ||||||||    
T  29790279 tttttaactaatatataaatacaaatattagcatgtaagttgttgttt 29790326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 190 - 232
Target Start/End: Original strand, 17155226 - 17155268
Alignment:
Q  190 taactaatatataaatacaaatgttagcatataagatgttgtt 232  Q
    ||||||| |||||||||||||||||||||| ||||||||||||    
T  17155226 taactaacatataaatacaaatgttagcatgtaagatgttgtt 17155268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 176 - 233
Target Start/End: Original strand, 1040887 - 1040944
Alignment:
Q  176 ttgacaatattttttaactaatatataaatacaaatgttagcatataagatgttgttt 233  Q
    ||||| ||| |||||||||||| ||||||||||||| ||| ||| |||||||||||||    
T  1040887 ttgaccatactttttaactaatgtataaatacaaatattaacatgtaagatgttgttt 1040944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 185 - 230
Target Start/End: Complemental strand, 7049052 - 7049007
Alignment:
Q  185 ttttttaactaatatataaatacaaatgttagcatataagatgttg 230  Q
    |||||||| || ||||||||||||||||||| ||||||||||||||    
T  7049052 ttttttaattattatataaatacaaatgttaccatataagatgttg 7049007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 176 - 233
Target Start/End: Complemental strand, 17257850 - 17257793
Alignment:
Q  176 ttgacaatattttttaactaatatataaatacaaatgttagcatataagatgttgttt 233  Q
    ||||| ||| |||||||||||| || |||||||||| ||||||| |||||||||||||    
T  17257850 ttgaccatactttttaactaatgtacaaatacaaatattagcatgtaagatgttgttt 17257793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 176 - 233
Target Start/End: Complemental strand, 20226497 - 20226440
Alignment:
Q  176 ttgacaatattttttaactaatatataaatacaaatgttagcatataagatgttgttt 233  Q
    ||||| ||| |||||||||||| ||||||||||||| ||||||| ||||| |||||||    
T  20226497 ttgaccatactttttaactaatgtataaatacaaatattagcatgtaagacgttgttt 20226440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 176 - 233
Target Start/End: Complemental strand, 22120481 - 22120424
Alignment:
Q  176 ttgacaatattttttaactaatatataaatacaaatgttagcatataagatgttgttt 233  Q
    ||||| ||| |||||||||||| ||||||||||||| ||||||| ||||| |||||||    
T  22120481 ttgaccatactttttaactaatgtataaatacaaatattagcatgtaagacgttgttt 22120424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 176 - 233
Target Start/End: Original strand, 32671879 - 32671936
Alignment:
Q  176 ttgacaatattttttaactaatatataaatacaaatgttagcatataagatgttgttt 233  Q
    ||||| ||| |||||||||||| ||||||||||||| ||||| | |||||||||||||    
T  32671879 ttgaccataatttttaactaatgtataaatacaaatattagcgtgtaagatgttgttt 32671936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 176 - 232
Target Start/End: Original strand, 4440913 - 4440969
Alignment:
Q  176 ttgacaatattttttaactaatatataaatacaaatgttagcatataagatgttgtt 232  Q
    ||||| ||| ||||||  ||| |||||||||||||||||||||| ||||||||||||    
T  4440913 ttgaccatactttttaggtaacatataaatacaaatgttagcatgtaagatgttgtt 4440969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 176 - 211
Target Start/End: Complemental strand, 19240791 - 19240756
Alignment:
Q  176 ttgacaatattttttaactaatatataaatacaaat 211  Q
    ||||| ||||||||||||||||||||||||||||||    
T  19240791 ttgaccatattttttaactaatatataaatacaaat 19240756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 176 - 230
Target Start/End: Original strand, 29693946 - 29694000
Alignment:
Q  176 ttgacaatattttttaactaatatataaatacaaatgttagcatataagatgttg 230  Q
    ||||| ||| ||||||||||||||||||||||||||  |||||| |||| |||||    
T  29693946 ttgaccataatttttaactaatatataaatacaaatactagcatgtaagttgttg 29694000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 183 - 219
Target Start/End: Complemental strand, 14214105 - 14214069
Alignment:
Q  183 tattttttaactaatatataaatacaaatgttagcat 219  Q
    ||||||||||| |||||||||||| ||||||||||||    
T  14214105 tattttttaaccaatatataaatataaatgttagcat 14214069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 185 - 233
Target Start/End: Complemental strand, 20437203 - 20437155
Alignment:
Q  185 ttttttaactaatatataaatacaaatgttagcatataagatgttgttt 233  Q
    ||||||||||||| ||||||||||||| | | ||| |||||||||||||    
T  20437203 ttttttaactaatgtataaatacaaatatcaacatgtaagatgttgttt 20437155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 187 - 223
Target Start/End: Original strand, 21913653 - 21913689
Alignment:
Q  187 ttttaactaatatataaatacaaatgttagcatataa 223  Q
    |||||||||||| |||||||||||| |||||||||||    
T  21913653 ttttaactaataaataaatacaaattttagcatataa 21913689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 185 - 233
Target Start/End: Complemental strand, 24321255 - 24321207
Alignment:
Q  185 ttttttaactaatatataaatacaaatgttagcatataagatgttgttt 233  Q
    |||||||||| ||||||||| |||||| |||| ||| ||||||||||||    
T  24321255 ttttttaactgatatataaagacaaattttagtatacaagatgttgttt 24321207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 175 - 233
Target Start/End: Complemental strand, 162037 - 161979
Alignment:
Q  175 attgacaatattttttaactaatatataaatacaaatgttagcatataagatgttgttt 233  Q
    |||||| ||| |||||||||||| ||||||||||||| ||||||| |||||||||||||    
T  162037 attgaccatactttttaactaatgtataaatacaaatattagcatgtaagatgttgttt 161979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 186 - 233
Target Start/End: Original strand, 71033 - 71080
Alignment:
Q  186 tttttaactaatatataaatacaaatgttagcatataagatgttgttt 233  Q
    |||||||||||| ||||||||||||| ||||||| |||||||||||||    
T  71033 tttttaactaatgtataaatacaaatattagcatttaagatgttgttt 71080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0295 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0295
Description:

Target: scaffold0295; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 176 - 233
Target Start/End: Complemental strand, 13916 - 13859
Alignment:
Q  176 ttgacaatattttttaactaatatataaatacaaatgttagcatataagatgttgttt 233  Q
    ||||| ||| |||||||||||| |||||||| |||| ||||||| |||||||||||||    
T  13916 ttgaccatactttttaactaatgtataaatataaatattagcatgtaagatgttgttt 13859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 176 - 233
Target Start/End: Complemental strand, 100846 - 100789
Alignment:
Q  176 ttgacaatattttttaactaatatataaatacaaatgttagcatataagatgttgttt 233  Q
    ||||| ||| |||||||||||| ||||||||||||| ||||| | |||||||||||||    
T  100846 ttgaccataatttttaactaatgtataaatacaaatattagcgtgtaagatgttgttt 100789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 176 - 233
Target Start/End: Complemental strand, 67968 - 67911
Alignment:
Q  176 ttgacaatattttttaactaatatataaatacaaatgttagcatataagatgttgttt 233  Q
    ||||| ||| |||||||||||| ||||||||||||| ||| ||| |||||||||||||    
T  67968 ttgaccatactttttaactaatgtataaatacaaatattaacatgtaagatgttgttt 67911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0608 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0608
Description:

Target: scaffold0608; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 182 - 232
Target Start/End: Original strand, 1589 - 1639
Alignment:
Q  182 atattttttaactaatatataaatacaaatgttagcatataagatgttgtt 232  Q
    ||||||||||| |||| ||||||||||||| ||||||| |||||| |||||    
T  1589 atattttttaattaatgtataaatacaaatattagcatgtaagatattgtt 1639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University