View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1596_low_58 (Length: 325)

Name: NF1596_low_58
Description: NF1596
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1596_low_58
NF1596_low_58
[»] chr3 (12 HSPs)
chr3 (1-268)||(36086264-36086531)
chr3 (269-308)||(14888067-14888106)
chr3 (268-308)||(4313621-4313661)
chr3 (268-308)||(14881341-14881381)
chr3 (269-308)||(261364-261403)
chr3 (269-308)||(13111813-13111852)
chr3 (269-308)||(14893172-14893211)
chr3 (269-308)||(16031285-16031324)
chr3 (269-308)||(21638587-21638626)
chr3 (268-308)||(13105665-13105705)
chr3 (268-300)||(15923318-15923350)
chr3 (269-301)||(23288155-23288187)
[»] chr1 (8 HSPs)
chr1 (1-58)||(11326807-11326864)
chr1 (1-58)||(11484828-11484885)
chr1 (268-308)||(1961637-1961677)
chr1 (268-308)||(2336083-2336123)
chr1 (268-308)||(19367474-19367514)
chr1 (269-308)||(22116377-22116416)
chr1 (269-308)||(35070035-35070074)
chr1 (269-307)||(16884518-16884556)
[»] chr6 (12 HSPs)
chr6 (268-308)||(20452684-20452724)
chr6 (267-308)||(18961023-18961064)
chr6 (268-308)||(19719835-19719875)
chr6 (269-308)||(12667564-12667603)
chr6 (269-308)||(17784097-17784136)
chr6 (269-308)||(19713680-19713719)
chr6 (269-308)||(26896467-26896506)
chr6 (269-308)||(28702914-28702953)
chr6 (267-308)||(19169104-19169145)
chr6 (269-301)||(21961607-21961639)
chr6 (267-295)||(22631692-22631720)
chr6 (268-308)||(24143592-24143632)
[»] chr7 (7 HSPs)
chr7 (259-308)||(9460435-9460484)
chr7 (268-308)||(9474234-9474274)
chr7 (268-308)||(34132848-34132888)
chr7 (269-308)||(1858593-1858632)
chr7 (269-308)||(34139160-34139199)
chr7 (271-308)||(43906101-43906138)
chr7 (268-308)||(42631285-42631325)
[»] scaffold0029 (1 HSPs)
scaffold0029 (267-307)||(38100-38140)
[»] chr5 (11 HSPs)
chr5 (268-308)||(20092779-20092819)
chr5 (268-308)||(20639889-20639929)
chr5 (268-308)||(25526187-25526227)
chr5 (268-308)||(36454626-36454666)
chr5 (269-308)||(15957008-15957047)
chr5 (269-308)||(36448249-36448288)
chr5 (271-308)||(26186675-26186712)
chr5 (267-308)||(26553292-26553333)
chr5 (269-301)||(20099683-20099715)
chr5 (268-308)||(21696071-21696111)
chr5 (268-308)||(25532867-25532907)
[»] chr4 (9 HSPs)
chr4 (268-308)||(3382471-3382511)
chr4 (269-308)||(3389219-3389258)
chr4 (269-308)||(19738035-19738074)
chr4 (269-308)||(20548381-20548420)
chr4 (269-308)||(20555005-20555044)
chr4 (269-308)||(39745447-39745486)
chr4 (269-308)||(50187783-50187822)
chr4 (269-307)||(22175865-22175903)
chr4 (267-308)||(13100668-13100709)
[»] scaffold0290 (1 HSPs)
scaffold0290 (269-308)||(22046-22085)
[»] scaffold0167 (1 HSPs)
scaffold0167 (269-308)||(7980-8019)
[»] scaffold0150 (1 HSPs)
scaffold0150 (269-308)||(38625-38664)
[»] scaffold0050 (1 HSPs)
scaffold0050 (269-308)||(27742-27781)
[»] scaffold0027 (1 HSPs)
scaffold0027 (269-308)||(23583-23622)
[»] scaffold0001 (1 HSPs)
scaffold0001 (269-308)||(96782-96821)
[»] chr8 (4 HSPs)
chr8 (269-308)||(14891888-14891927)
chr8 (269-307)||(15061363-15061401)
chr8 (268-296)||(20733159-20733187)
chr8 (269-301)||(25859308-25859340)
[»] chr2 (9 HSPs)
chr2 (269-308)||(5874278-5874317)
chr2 (269-308)||(20279358-20279397)
chr2 (269-308)||(36735333-36735372)
chr2 (269-308)||(38084494-38084533)
chr2 (269-301)||(18322-18354)
chr2 (268-308)||(5871137-5871177)
chr2 (268-308)||(12374553-12374593)
chr2 (268-308)||(12388380-12388420)
chr2 (268-308)||(18500225-18500265)
[»] scaffold0755 (1 HSPs)
scaffold0755 (268-308)||(962-1002)
[»] scaffold0269 (1 HSPs)
scaffold0269 (267-295)||(14677-14705)
[»] scaffold0085 (1 HSPs)
scaffold0085 (269-301)||(7832-7864)
[»] scaffold0068 (1 HSPs)
scaffold0068 (268-308)||(17799-17839)
[»] scaffold0028 (1 HSPs)
scaffold0028 (269-301)||(65838-65870)


Alignment Details
Target: chr3 (Bit Score: 264; Significance: 1e-147; HSPs: 12)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 264; E-Value: 1e-147
Query Start/End: Original strand, 1 - 268
Target Start/End: Original strand, 36086264 - 36086531
Alignment:
Q  1 tatctcttgattccactgcttggtcatatctatacctcagattcatgagagcaatgtcaaagtaacacataaactcataataaattaccaatgcacatac 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  36086264 tatctcttgattccactgcttggtcatatctatacctcagattcatgagagcaatgtcaaagtaacacataaactcataataaattaccaatgcacatac 36086363  T
Q  101 tataaaatgttaacaatcaacacatgtcaacaaacgaaacttcagcaccaccaattctttttccaacatcttgaatcagatataaaaatgaagcaaaaat 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  36086364 tataaaatgttaacaatcaacacatgtcaacaaacgaaacttcagcaccaccaattctttttccaacatcttgaatcagatataaaaatgaagcaaaaat 36086463  T
Q  201 aaatcaatttagtaatcatcaaataagatgcggtcacagccataaaaccttggcaatgagttcctgac 268  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  36086464 aaatcaatttagtaatcatcaaataagatgcggtcacagccataaaaccttggcaatgagttcttgac 36086531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 269 - 308
Target Start/End: Complemental strand, 14888106 - 14888067
Alignment:
Q  269 tgtcataccccaatttttgacctaaggctccacggacaca 308  Q
    ||||||||||||||||||||||||||||||||| ||||||    
T  14888106 tgtcataccccaatttttgacctaaggctccactgacaca 14888067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 268 - 308
Target Start/End: Complemental strand, 4313661 - 4313621
Alignment:
Q  268 ctgtcataccccaatttttgacctaaggctccacggacaca 308  Q
    ||||||||||||||||||||||||||||| |||| ||||||    
T  4313661 ctgtcataccccaatttttgacctaaggccccactgacaca 4313621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 268 - 308
Target Start/End: Complemental strand, 14881381 - 14881341
Alignment:
Q  268 ctgtcataccccaatttttgacctaaggctccacggacaca 308  Q
    ||||||||||||||||||||||||||||| |||| ||||||    
T  14881381 ctgtcataccccaatttttgacctaaggccccaccgacaca 14881341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 269 - 308
Target Start/End: Original strand, 261364 - 261403
Alignment:
Q  269 tgtcataccccaatttttgacctaaggctccacggacaca 308  Q
    |||||||||||||||||||||||||||| |||| ||||||    
T  261364 tgtcataccccaatttttgacctaaggccccactgacaca 261403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 269 - 308
Target Start/End: Complemental strand, 13111852 - 13111813
Alignment:
Q  269 tgtcataccccaatttttgacctaaggctccacggacaca 308  Q
    |||||||||||||||||||||||||||| |||| ||||||    
T  13111852 tgtcataccccaatttttgacctaaggccccactgacaca 13111813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 269 - 308
Target Start/End: Complemental strand, 14893211 - 14893172
Alignment:
Q  269 tgtcataccccaatttttgacctaaggctccacggacaca 308  Q
    |||||||||||||||||||||||||||| |||| ||||||    
T  14893211 tgtcataccccaatttttgacctaaggccccactgacaca 14893172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 269 - 308
Target Start/End: Complemental strand, 16031324 - 16031285
Alignment:
Q  269 tgtcataccccaatttttgacctaaggctccacggacaca 308  Q
    |||||||||||||||||||||||||||| |||| ||||||    
T  16031324 tgtcataccccaatttttgacctaaggccccactgacaca 16031285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 269 - 308
Target Start/End: Complemental strand, 21638626 - 21638587
Alignment:
Q  269 tgtcataccccaatttttgacctaaggctccacggacaca 308  Q
    |||||||||||||||||||||||||||| |||| ||||||    
T  21638626 tgtcataccccaatttttgacctaaggccccactgacaca 21638587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 268 - 308
Target Start/End: Complemental strand, 13105705 - 13105665
Alignment:
Q  268 ctgtcataccccaatttttgacctaaggctccacggacaca 308  Q
    ||||||||||| ||||||||||||||||| |||| ||||||    
T  13105705 ctgtcataccctaatttttgacctaaggccccactgacaca 13105665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 268 - 300
Target Start/End: Original strand, 15923318 - 15923350
Alignment:
Q  268 ctgtcataccccaatttttgacctaaggctcca 300  Q
    |||||||||||||||||||||||||||| ||||    
T  15923318 ctgtcataccccaatttttgacctaaggatcca 15923350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 269 - 301
Target Start/End: Complemental strand, 23288187 - 23288155
Alignment:
Q  269 tgtcataccccaatttttgacctaaggctccac 301  Q
    |||||||||||||||||||||||||||| ||||    
T  23288187 tgtcataccccaatttttgacctaaggccccac 23288155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 38; Significance: 0.000000000002; HSPs: 8)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 11326807 - 11326864
Alignment:
Q  1 tatctcttgattccactgcttggtcatatctatacctcagattcatgagagcaatgtc 58  Q
    |||||||||||||||||||  | ||||||||||||||| |||||||||||| ||||||    
T  11326807 tatctcttgattccactgcaagatcatatctatacctctgattcatgagagaaatgtc 11326864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 11484828 - 11484885
Alignment:
Q  1 tatctcttgattccactgcttggtcatatctatacctcagattcatgagagcaatgtc 58  Q
    |||||||||||||||||||  | ||||||||||||||| |||||||||||| ||||||    
T  11484828 tatctcttgattccactgcaagatcatatctatacctctgattcatgagagaaatgtc 11484885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 268 - 308
Target Start/End: Original strand, 1961637 - 1961677
Alignment:
Q  268 ctgtcataccccaatttttgacctaaggctccacggacaca 308  Q
    ||||||||||||||||||||||||||||| |||| ||||||    
T  1961637 ctgtcataccccaatttttgacctaaggccccactgacaca 1961677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 268 - 308
Target Start/End: Complemental strand, 2336123 - 2336083
Alignment:
Q  268 ctgtcataccccaatttttgacctaaggctccacggacaca 308  Q
    ||||||||||||||||||||||||||||| |||| ||||||    
T  2336123 ctgtcataccccaatttttgacctaaggccccactgacaca 2336083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 268 - 308
Target Start/End: Original strand, 19367474 - 19367514
Alignment:
Q  268 ctgtcataccccaatttttgacctaaggctccacggacaca 308  Q
    ||||||||||||||||||||||||||||| |||| ||||||    
T  19367474 ctgtcataccccaatttttgacctaaggccccactgacaca 19367514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 269 - 308
Target Start/End: Complemental strand, 22116416 - 22116377
Alignment:
Q  269 tgtcataccccaatttttgacctaaggctccacggacaca 308  Q
    |||||||||||||||||||||||||||| |||| ||||||    
T  22116416 tgtcataccccaatttttgacctaaggccccactgacaca 22116377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 269 - 308
Target Start/End: Original strand, 35070035 - 35070074
Alignment:
Q  269 tgtcataccccaatttttgacctaaggctccacggacaca 308  Q
    |||||||||||||||||||||||||||| |||| ||||||    
T  35070035 tgtcataccccaatttttgacctaaggccccactgacaca 35070074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 269 - 307
Target Start/End: Original strand, 16884518 - 16884556
Alignment:
Q  269 tgtcataccccaatttttgacctaaggctccacggacac 307  Q
    |||||||||||||||||||||||||||| |||| |||||    
T  16884518 tgtcataccccaatttttgacctaaggccccactgacac 16884556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 37; Significance: 0.000000000007; HSPs: 12)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 268 - 308
Target Start/End: Complemental strand, 20452724 - 20452684
Alignment:
Q  268 ctgtcataccccaatttttgacctaaggctccacggacaca 308  Q
    |||||||||||||||||||||||||||||||||| ||||||    
T  20452724 ctgtcataccccaatttttgacctaaggctccactgacaca 20452684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 267 - 308
Target Start/End: Complemental strand, 18961064 - 18961023
Alignment:
Q  267 actgtcataccccaatttttgacctaaggctccacggacaca 308  Q
    |||||||||||||||||||||||||||||| |||| ||||||    
T  18961064 actgtcataccccaatttttgacctaaggccccactgacaca 18961023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 268 - 308
Target Start/End: Original strand, 19719835 - 19719875
Alignment:
Q  268 ctgtcataccccaatttttgacctaaggctccacggacaca 308  Q
    ||||||||||||||||||||||||||||| |||| ||||||    
T  19719835 ctgtcataccccaatttttgacctaaggccccactgacaca 19719875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 269 - 308
Target Start/End: Complemental strand, 12667603 - 12667564
Alignment:
Q  269 tgtcataccccaatttttgacctaaggctccacggacaca 308  Q
    |||||||||||||||||||||||||||| |||| ||||||    
T  12667603 tgtcataccccaatttttgacctaaggccccactgacaca 12667564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 269 - 308
Target Start/End: Complemental strand, 17784136 - 17784097
Alignment:
Q  269 tgtcataccccaatttttgacctaaggctccacggacaca 308  Q
    |||||||| |||||||||||||||||||||||| ||||||    
T  17784136 tgtcatacaccaatttttgacctaaggctccactgacaca 17784097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 269 - 308
Target Start/End: Original strand, 19713680 - 19713719
Alignment:
Q  269 tgtcataccccaatttttgacctaaggctccacggacaca 308  Q
    |||||||||||||||||||||||||||| |||| ||||||    
T  19713680 tgtcataccccaatttttgacctaaggccccactgacaca 19713719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 269 - 308
Target Start/End: Original strand, 26896467 - 26896506
Alignment:
Q  269 tgtcataccccaatttttgacctaaggctccacggacaca 308  Q
    |||||||||||||||||||||||||||| |||| ||||||    
T  26896467 tgtcataccccaatttttgacctaaggccccactgacaca 26896506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 269 - 308
Target Start/End: Complemental strand, 28702953 - 28702914
Alignment:
Q  269 tgtcataccccaatttttgacctaaggctccacggacaca 308  Q
    |||||||||||||||||||||||||||| |||| ||||||    
T  28702953 tgtcataccccaatttttgacctaaggccccactgacaca 28702914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 267 - 308
Target Start/End: Original strand, 19169104 - 19169145
Alignment:
Q  267 actgtcataccccaatttttgacctaaggctccacggacaca 308  Q
    |||||||||||||||||||||||||||||  |||| ||||||    
T  19169104 actgtcataccccaatttttgacctaaggtcccactgacaca 19169145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 269 - 301
Target Start/End: Original strand, 21961607 - 21961639
Alignment:
Q  269 tgtcataccccaatttttgacctaaggctccac 301  Q
    ||||||||||||||||||||||||||| |||||    
T  21961607 tgtcataccccaatttttgacctaaggttccac 21961639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 267 - 295
Target Start/End: Original strand, 22631692 - 22631720
Alignment:
Q  267 actgtcataccccaatttttgacctaagg 295  Q
    |||||||||||||||||||||||||||||    
T  22631692 actgtcataccccaatttttgacctaagg 22631720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 268 - 308
Target Start/End: Complemental strand, 24143632 - 24143592
Alignment:
Q  268 ctgtcataccccaatttttgacctaaggctccacggacaca 308  Q
    ||||||||||||||||||||||||||||  |||| ||||||    
T  24143632 ctgtcataccccaatttttgacctaaggtcccactgacaca 24143592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 34; Significance: 0.0000000005; HSPs: 7)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 259 - 308
Target Start/End: Original strand, 9460435 - 9460484
Alignment:
Q  259 agttcctgactgtcataccccaatttttgacctaaggctccacggacaca 308  Q
    ||||| ||| ||||||||||||| ||||||||||||||||||| ||||||    
T  9460435 agttcatgattgtcataccccaaattttgacctaaggctccactgacaca 9460484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 268 - 308
Target Start/End: Original strand, 9474234 - 9474274
Alignment:
Q  268 ctgtcataccccaatttttgacctaaggctccacggacaca 308  Q
    |||||||||||||| ||||||||||||||||||| ||||||    
T  9474234 ctgtcataccccaaattttgacctaaggctccactgacaca 9474274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 268 - 308
Target Start/End: Complemental strand, 34132888 - 34132848
Alignment:
Q  268 ctgtcataccccaatttttgacctaaggctccacggacaca 308  Q
    ||||||||||||||||||||||||||||| |||| ||||||    
T  34132888 ctgtcataccccaatttttgacctaaggccccactgacaca 34132848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 269 - 308
Target Start/End: Complemental strand, 1858632 - 1858593
Alignment:
Q  269 tgtcataccccaatttttgacctaaggctccacggacaca 308  Q
    |||||||||||||||||||||||||||| |||| ||||||    
T  1858632 tgtcataccccaatttttgacctaaggccccactgacaca 1858593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 269 - 308
Target Start/End: Complemental strand, 34139199 - 34139160
Alignment:
Q  269 tgtcataccccaatttttgacctaaggctccacggacaca 308  Q
    |||||||||||||||||||| |||||||||||| ||||||    
T  34139199 tgtcataccccaatttttgatctaaggctccactgacaca 34139160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 271 - 308
Target Start/End: Original strand, 43906101 - 43906138
Alignment:
Q  271 tcataccccaatttttgacctaaggctccacggacaca 308  Q
    |||||||||||||||||||||||||| |||| ||||||    
T  43906101 tcataccccaatttttgacctaaggccccactgacaca 43906138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 268 - 308
Target Start/End: Complemental strand, 42631325 - 42631285
Alignment:
Q  268 ctgtcataccccaatttttgacctaaggctccacggacaca 308  Q
    ||||||||||||||||||||||||||||  |||| ||||||    
T  42631325 ctgtcataccccaatttttgacctaaggtcccactgacaca 42631285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 267 - 307
Target Start/End: Complemental strand, 38140 - 38100
Alignment:
Q  267 actgtcataccccaatttttgacctaaggctccacggacac 307  Q
    |||||||||||||||||||||||||||||| |||| |||||    
T  38140 actgtcataccccaatttttgacctaaggccccactgacac 38100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 33; Significance: 0.000000002; HSPs: 11)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 268 - 308
Target Start/End: Complemental strand, 20092819 - 20092779
Alignment:
Q  268 ctgtcataccccaatttttgacctaaggctccacggacaca 308  Q
    ||||||||||||||||||||||||||||| |||| ||||||    
T  20092819 ctgtcataccccaatttttgacctaaggccccactgacaca 20092779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 268 - 308
Target Start/End: Complemental strand, 20639929 - 20639889
Alignment:
Q  268 ctgtcataccccaatttttgacctaaggctccacggacaca 308  Q
    ||||||||||||||||||||||||||||| |||| ||||||    
T  20639929 ctgtcataccccaatttttgacctaaggccccactgacaca 20639889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 268 - 308
Target Start/End: Original strand, 25526187 - 25526227
Alignment:
Q  268 ctgtcataccccaatttttgacctaaggctccacggacaca 308  Q
    ||||||||||||||||||||||||||||| |||| ||||||    
T  25526187 ctgtcataccccaatttttgacctaaggccccactgacaca 25526227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 268 - 308
Target Start/End: Original strand, 36454626 - 36454666
Alignment:
Q  268 ctgtcataccccaatttttgacctaaggctccacggacaca 308  Q
    |||||||||||||||||||||||||||||  ||||||||||    
T  36454626 ctgtcataccccaatttttgacctaaggcctcacggacaca 36454666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 269 - 308
Target Start/End: Complemental strand, 15957047 - 15957008
Alignment:
Q  269 tgtcataccccaatttttgacctaaggctccacggacaca 308  Q
    ||||||||||||||||||||||||||| ||||| ||||||    
T  15957047 tgtcataccccaatttttgacctaaggttccactgacaca 15957008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 269 - 308
Target Start/End: Original strand, 36448249 - 36448288
Alignment:
Q  269 tgtcataccccaatttttgacctaaggctccacggacaca 308  Q
    |||||||||||||||||||||||||||| |||| ||||||    
T  36448249 tgtcataccccaatttttgacctaaggccccactgacaca 36448288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 271 - 308
Target Start/End: Complemental strand, 26186712 - 26186675
Alignment:
Q  271 tcataccccaatttttgacctaaggctccacggacaca 308  Q
    |||||||||||||||||||||||||| |||| ||||||    
T  26186712 tcataccccaatttttgacctaaggccccactgacaca 26186675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 267 - 308
Target Start/End: Complemental strand, 26553333 - 26553292
Alignment:
Q  267 actgtcataccccaatttttgacctaaggctccacggacaca 308  Q
    |||||||||||||||||||||||||||||  |||| ||||||    
T  26553333 actgtcataccccaatttttgacctaaggtcccactgacaca 26553292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 269 - 301
Target Start/End: Complemental strand, 20099715 - 20099683
Alignment:
Q  269 tgtcataccccaatttttgacctaaggctccac 301  Q
    |||||||||||||||||||||||||||| ||||    
T  20099715 tgtcataccccaatttttgacctaaggccccac 20099683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 268 - 308
Target Start/End: Original strand, 21696071 - 21696111
Alignment:
Q  268 ctgtcataccccaatttttgacctaaggctccacggacaca 308  Q
    ||||||||||||||||||||||||||||  |||| ||||||    
T  21696071 ctgtcataccccaatttttgacctaaggtcccactgacaca 21696111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 268 - 308
Target Start/End: Original strand, 25532867 - 25532907
Alignment:
Q  268 ctgtcataccccaatttttgacctaaggctccacggacaca 308  Q
    |||||||| |||||||||||||||||||| |||| ||||||    
T  25532867 ctgtcatatcccaatttttgacctaaggccccactgacaca 25532907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 33; Significance: 0.000000002; HSPs: 9)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 268 - 308
Target Start/End: Complemental strand, 3382511 - 3382471
Alignment:
Q  268 ctgtcataccccaatttttgacctaaggctccacggacaca 308  Q
    ||||||||||||||||||||||||||||| |||| ||||||    
T  3382511 ctgtcataccccaatttttgacctaaggccccactgacaca 3382471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 269 - 308
Target Start/End: Complemental strand, 3389258 - 3389219
Alignment:
Q  269 tgtcataccccaatttttgacctaaggctccacggacaca 308  Q
    |||||||||||||||||||||||||||| |||| ||||||    
T  3389258 tgtcataccccaatttttgacctaaggccccactgacaca 3389219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 269 - 308
Target Start/End: Complemental strand, 19738074 - 19738035
Alignment:
Q  269 tgtcataccccaatttttgacctaaggctccacggacaca 308  Q
    |||||||||||||||||||||||||||| |||| ||||||    
T  19738074 tgtcataccccaatttttgacctaaggccccactgacaca 19738035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 269 - 308
Target Start/End: Original strand, 20548381 - 20548420
Alignment:
Q  269 tgtcataccccaatttttgacctaaggctccacggacaca 308  Q
    |||||||||||||||||||||||||||| |||| ||||||    
T  20548381 tgtcataccccaatttttgacctaaggccccactgacaca 20548420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 269 - 308
Target Start/End: Original strand, 20555005 - 20555044
Alignment:
Q  269 tgtcataccccaatttttgacctaaggctccacggacaca 308  Q
    |||||||||||||||||||||||||||| |||| ||||||    
T  20555005 tgtcataccccaatttttgacctaaggccccactgacaca 20555044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 269 - 308
Target Start/End: Complemental strand, 39745486 - 39745447
Alignment:
Q  269 tgtcataccccaatttttgacctaaggctccacggacaca 308  Q
    |||||||||||||||||||||||||||| |||| ||||||    
T  39745486 tgtcataccccaatttttgacctaaggccccactgacaca 39745447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 269 - 308
Target Start/End: Original strand, 50187783 - 50187822
Alignment:
Q  269 tgtcataccccaatttttgacctaaggctccacggacaca 308  Q
    |||||||||||||||||||||||||||| |||| ||||||    
T  50187783 tgtcataccccaatttttgacctaaggccccactgacaca 50187822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 269 - 307
Target Start/End: Complemental strand, 22175903 - 22175865
Alignment:
Q  269 tgtcataccccaatttttgacctaaggctccacggacac 307  Q
    |||||||||||||||||||||||||||| |||| |||||    
T  22175903 tgtcataccccaatttttgacctaaggccccactgacac 22175865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 267 - 308
Target Start/End: Original strand, 13100668 - 13100709
Alignment:
Q  267 actgtcataccccaatttttgacctaaggctccacggacaca 308  Q
    ||||||||||||||| |||||||||||||| |||| ||||||    
T  13100668 actgtcataccccaaattttgacctaaggccccactgacaca 13100709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0290 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0290
Description:

Target: scaffold0290; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 269 - 308
Target Start/End: Original strand, 22046 - 22085
Alignment:
Q  269 tgtcataccccaatttttgacctaaggctccacggacaca 308  Q
    |||||||||||||||||||||||||||| |||| ||||||    
T  22046 tgtcataccccaatttttgacctaaggccccactgacaca 22085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0167 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0167
Description:

Target: scaffold0167; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 269 - 308
Target Start/End: Original strand, 7980 - 8019
Alignment:
Q  269 tgtcataccccaatttttgacctaaggctccacggacaca 308  Q
    |||||||||||||||||||||||||||| |||| ||||||    
T  7980 tgtcataccccaatttttgacctaaggccccactgacaca 8019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0150 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0150
Description:

Target: scaffold0150; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 269 - 308
Target Start/End: Complemental strand, 38664 - 38625
Alignment:
Q  269 tgtcataccccaatttttgacctaaggctccacggacaca 308  Q
    |||||||||||||||||||||||||||| |||| ||||||    
T  38664 tgtcataccccaatttttgacctaaggccccactgacaca 38625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0050 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 269 - 308
Target Start/End: Complemental strand, 27781 - 27742
Alignment:
Q  269 tgtcataccccaatttttgacctaaggctccacggacaca 308  Q
    |||||||||||||||||||||||||||| |||| ||||||    
T  27781 tgtcataccccaatttttgacctaaggccccactgacaca 27742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 269 - 308
Target Start/End: Original strand, 23583 - 23622
Alignment:
Q  269 tgtcataccccaatttttgacctaaggctccacggacaca 308  Q
    |||||||||||||||||||||||||||| |||| ||||||    
T  23583 tgtcataccccaatttttgacctaaggccccactgacaca 23622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 269 - 308
Target Start/End: Original strand, 96782 - 96821
Alignment:
Q  269 tgtcataccccaatttttgacctaaggctccacggacaca 308  Q
    |||||||||||||||||||||||||||| |||| ||||||    
T  96782 tgtcataccccaatttttgacctaaggccccactgacaca 96821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 32; Significance: 0.000000007; HSPs: 4)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 269 - 308
Target Start/End: Complemental strand, 14891927 - 14891888
Alignment:
Q  269 tgtcataccccaatttttgacctaaggctccacggacaca 308  Q
    |||||||||||||||||||||||||||| |||| ||||||    
T  14891927 tgtcataccccaatttttgacctaaggccccactgacaca 14891888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 269 - 307
Target Start/End: Complemental strand, 15061401 - 15061363
Alignment:
Q  269 tgtcataccccaatttttgacctaaggctccacggacac 307  Q
    |||||||||||||||||||||||||||| |||| |||||    
T  15061401 tgtcataccccaatttttgacctaaggccccactgacac 15061363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 268 - 296
Target Start/End: Original strand, 20733159 - 20733187
Alignment:
Q  268 ctgtcataccccaatttttgacctaaggc 296  Q
    |||||||||||||||||||||||||||||    
T  20733159 ctgtcataccccaatttttgacctaaggc 20733187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 269 - 301
Target Start/End: Complemental strand, 25859340 - 25859308
Alignment:
Q  269 tgtcataccccaatttttgacctaaggctccac 301  Q
    |||||||||||||||||||||||||||| ||||    
T  25859340 tgtcataccccaatttttgacctaaggccccac 25859308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 32; Significance: 0.000000007; HSPs: 9)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 269 - 308
Target Start/End: Complemental strand, 5874317 - 5874278
Alignment:
Q  269 tgtcataccccaatttttgacctaaggctccacggacaca 308  Q
    ||||||||||||||||||||||||||| ||||| ||||||    
T  5874317 tgtcataccccaatttttgacctaagggtccactgacaca 5874278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 269 - 308
Target Start/End: Complemental strand, 20279397 - 20279358
Alignment:
Q  269 tgtcataccccaatttttgacctaaggctccacggacaca 308  Q
    |||||||||||||||||||||||||||| |||| ||||||    
T  20279397 tgtcataccccaatttttgacctaaggccccactgacaca 20279358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 269 - 308
Target Start/End: Original strand, 36735333 - 36735372
Alignment:
Q  269 tgtcataccccaatttttgacctaaggctccacggacaca 308  Q
    |||||||||||||||||||||||||||| |||| ||||||    
T  36735333 tgtcataccccaatttttgacctaaggccccactgacaca 36735372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 269 - 308
Target Start/End: Complemental strand, 38084533 - 38084494
Alignment:
Q  269 tgtcataccccaatttttgacctaaggctccacggacaca 308  Q
    |||||||||||||||||||||||||||| |||| ||||||    
T  38084533 tgtcataccccaatttttgacctaaggccccactgacaca 38084494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 269 - 301
Target Start/End: Complemental strand, 18354 - 18322
Alignment:
Q  269 tgtcataccccaatttttgacctaaggctccac 301  Q
    |||||||||||||||||||||||||||| ||||    
T  18354 tgtcataccccaatttttgacctaaggccccac 18322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 268 - 308
Target Start/End: Complemental strand, 5871177 - 5871137
Alignment:
Q  268 ctgtcataccccaatttttgacctaaggctccacggacaca 308  Q
    ||||||||||||||||||||||||||||  |||| ||||||    
T  5871177 ctgtcataccccaatttttgacctaagggcccactgacaca 5871137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 268 - 308
Target Start/End: Original strand, 12374553 - 12374593
Alignment:
Q  268 ctgtcataccccaatttttgacctaaggctccacggacaca 308  Q
    |||||||||||||| ||||||||||||| ||||| ||||||    
T  12374553 ctgtcataccccaaattttgacctaaggttccactgacaca 12374593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 268 - 308
Target Start/End: Original strand, 12388380 - 12388420
Alignment:
Q  268 ctgtcataccccaatttttgacctaaggctccacggacaca 308  Q
    |||||||||||||| ||||||||||||| ||||| ||||||    
T  12388380 ctgtcataccccaaattttgacctaaggttccactgacaca 12388420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 268 - 308
Target Start/End: Original strand, 18500225 - 18500265
Alignment:
Q  268 ctgtcataccccaatttttgacctaaggctccacggacaca 308  Q
    ||||||||||||||||||||| ||||||| |||| ||||||    
T  18500225 ctgtcataccccaatttttgatctaaggccccactgacaca 18500265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0755 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0755
Description:

Target: scaffold0755; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 268 - 308
Target Start/End: Original strand, 962 - 1002
Alignment:
Q  268 ctgtcataccccaatttttgacctaaggctccacggacaca 308  Q
    |||||||||||||| |||||||||||||| |||| ||||||    
T  962 ctgtcataccccaaattttgacctaaggccccactgacaca 1002  T

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Target: scaffold0269 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0269
Description:

Target: scaffold0269; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 267 - 295
Target Start/End: Complemental strand, 14705 - 14677
Alignment:
Q  267 actgtcataccccaatttttgacctaagg 295  Q
    |||||||||||||||||||||||||||||    
T  14705 actgtcataccccaatttttgacctaagg 14677  T

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Target: scaffold0085 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0085
Description:

Target: scaffold0085; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 269 - 301
Target Start/End: Complemental strand, 7864 - 7832
Alignment:
Q  269 tgtcataccccaatttttgacctaaggctccac 301  Q
    |||||||||||||||||||||||||||| ||||    
T  7864 tgtcataccccaatttttgacctaaggccccac 7832  T

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Target: scaffold0068 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0068
Description:

Target: scaffold0068; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 268 - 308
Target Start/End: Complemental strand, 17839 - 17799
Alignment:
Q  268 ctgtcataccccaatttttgacctaaggctccacggacaca 308  Q
    ||||||||||||||||||||||||||||  |||| ||||||    
T  17839 ctgtcataccccaatttttgacctaaggtcccactgacaca 17799  T

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Target: scaffold0028 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 269 - 301
Target Start/End: Original strand, 65838 - 65870
Alignment:
Q  269 tgtcataccccaatttttgacctaaggctccac 301  Q
    |||||||||||||||||||||||||||| ||||    
T  65838 tgtcataccccaatttttgacctaaggccccac 65870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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