View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1596_low_7 (Length: 587)

Name: NF1596_low_7
Description: NF1596
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1596_low_7
NF1596_low_7
[»] chr7 (12 HSPs)
chr7 (19-575)||(1109109-1109669)
chr7 (471-568)||(1093137-1093234)
chr7 (255-317)||(30900111-30900173)
chr7 (263-317)||(39417762-39417816)
chr7 (261-300)||(28613249-28613288)
chr7 (261-319)||(33581726-33581784)
chr7 (263-317)||(46404620-46404674)
chr7 (263-292)||(8095917-8095946)
chr7 (256-317)||(38921262-38921323)
chr7 (261-317)||(25268818-25268874)
chr7 (266-302)||(26848528-26848564)
chr7 (261-317)||(38622884-38622940)
[»] chr6 (15 HSPs)
chr6 (255-318)||(9163755-9163818)
chr6 (261-317)||(21869863-21869919)
chr6 (261-317)||(32136349-32136405)
chr6 (261-319)||(1912511-1912569)
chr6 (261-319)||(2732934-2732992)
chr6 (261-319)||(21869228-21869286)
chr6 (255-340)||(15724715-15724799)
chr6 (261-317)||(33532496-33532552)
chr6 (264-299)||(4354351-4354386)
chr6 (262-300)||(14933031-14933069)
chr6 (271-320)||(10334672-10334721)
chr6 (255-300)||(31694721-31694766)
chr6 (261-349)||(10156679-10156767)
chr6 (261-317)||(24769309-24769365)
chr6 (255-319)||(26373081-26373145)
[»] chr1 (10 HSPs)
chr1 (261-317)||(43391539-43391595)
chr1 (255-317)||(6025969-6026031)
chr1 (269-317)||(3950673-3950721)
chr1 (261-315)||(12913243-12913297)
chr1 (261-319)||(15606334-15606392)
chr1 (257-323)||(35488276-35488342)
chr1 (264-317)||(49165369-49165422)
chr1 (261-317)||(3335145-3335201)
chr1 (261-317)||(14643206-14643262)
chr1 (261-317)||(15956878-15956934)
[»] chr4 (4 HSPs)
chr4 (261-311)||(2843586-2843636)
chr4 (261-319)||(13458794-13458852)
chr4 (261-300)||(34581596-34581635)
chr4 (261-317)||(34416907-34416963)
[»] chr3 (11 HSPs)
chr3 (261-319)||(21754236-21754294)
chr3 (243-319)||(2990968-2991045)
chr3 (261-298)||(2101663-2101700)
chr3 (255-315)||(20690079-20690139)
chr3 (271-317)||(16792285-16792331)
chr3 (272-317)||(3728422-3728467)
chr3 (271-300)||(9279862-9279891)
chr3 (263-316)||(25252041-25252094)
chr3 (263-300)||(33726909-33726946)
chr3 (255-300)||(51295699-51295744)
chr3 (268-316)||(3133473-3133521)
[»] chr8 (6 HSPs)
chr8 (264-317)||(8284356-8284409)
chr8 (261-317)||(16950255-16950311)
chr8 (265-300)||(11412605-11412640)
chr8 (255-299)||(78101-78145)
chr8 (269-317)||(10354835-10354882)
chr8 (261-317)||(45371103-45371159)
[»] chr5 (10 HSPs)
chr5 (261-317)||(27725507-27725563)
chr5 (261-318)||(41399575-41399632)
chr5 (255-290)||(4787939-4787974)
chr5 (261-296)||(13996379-13996414)
chr5 (255-314)||(28734171-28734230)
chr5 (258-292)||(10389969-10390003)
chr5 (261-317)||(7477559-7477615)
chr5 (261-317)||(16033033-16033089)
chr5 (261-317)||(38346862-38346918)
chr5 (261-317)||(43283419-43283475)
[»] chr2 (8 HSPs)
chr2 (264-319)||(11530027-11530082)
chr2 (261-290)||(10547216-10547245)
chr2 (261-318)||(26174925-26174981)
chr2 (254-299)||(35928284-35928329)
chr2 (264-317)||(39597577-39597630)
chr2 (261-290)||(44460358-44460387)
chr2 (269-317)||(18264809-18264857)
chr2 (261-317)||(44458233-44458289)
[»] scaffold0913 (1 HSPs)
scaffold0913 (261-300)||(1283-1322)
[»] scaffold0898 (1 HSPs)
scaffold0898 (261-300)||(4279-4318)


Alignment Details
Target: chr7 (Bit Score: 507; Significance: 0; HSPs: 12)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 507; E-Value: 0
Query Start/End: Original strand, 19 - 575
Target Start/End: Original strand, 1109109 - 1109669
Alignment:
Q  19 gtagtaatattctaattgcaagtttaaaacagtgcaaacaaggactgtttttagtatcggagaatcacaa---gtgatacatcatgtcatctagcatatt 115  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||   |||||||||||||||||||||||||||    
T  1109109 gtagtaatattctaattgcaagtttataacagtgcaaacaaggactgtttttagtatcggagaatcacaacaagtgatacatcatgtcatctagcatatt 1109208  T
Q  116 ggttcatgccttggttcatatgcgtccatatcgtacaaaacaatccttaaggctcgtgacatactatagcaatgttttcaatcgcagatcgtacaaaata 215  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1109209 ggttcatgccttggttcatatgcgtccatatcgtacaaaataatccttaaggctcgtgacatactatagcaatgttttcaatcgcagatcgtacaaaata 1109308  T
Q  216 atgtttgttaaaattcaacttgacagaagtgctatagggcactacttgacaacattttgtactaaatagtgtatcgcggaacaatggggatttgttcaaa 315  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1109309 atgtttgttaaaattcaacttgacagaagtgctatagggcactacttgacaacattttgtactaaatagtgtatcgcggaacaatggggatttgttcaaa 1109408  T
Q  316 tttctctgcaccatagcgccgctatgtaacaacactttcgtataaaatatcaaaaccaaataaaaaacagctttaggacatgaaaattaacaacggttta 415  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  1109409 tttctctgcaccatagcgccgctatgtaacaacactttcgtataaaatatcaaaaccaaataaaaaaaagctttaggacatgaaaattaacaacggttta 1109508  T
Q  416 gattttaaactatcaaaagtagca-aatcatagcaaattttaaggcaggaatttgtagcatataagaatgagaagaacaatttcttacttcttgaaggca 514  Q
    |||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  1109509 gattttaaactatcaaaagtagcataatcatagaaaattttaaggcaggaatttgtagcatataagaatgtgaagaacaatttcttacttcttgaaggca 1109608  T
Q  515 attagatagaagtgaggcggttgatgtagacgccgggaatccagttggatggtacaacctt 575  Q
    |||||||||||||||| ||||||||||||| |||||||||||||||||||||||| |||||    
T  1109609 attagatagaagtgagacggttgatgtagatgccgggaatccagttggatggtacgacctt 1109669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 471 - 568
Target Start/End: Original strand, 1093137 - 1093234
Alignment:
Q  471 agcatataagaatgagaagaacaatttcttacttcttgaaggcaattagatagaagtgaggcggttgatgtagacgccgggaatccagttggatggta 568  Q
    ||||||| |||| ||||||||| ||||||||||||||||||  ||||||||||||||||| |||||||||||||  ||||||||||||||| ||||||    
T  1093137 agcatatgagaaagagaagaaccatttcttacttcttgaagaaaattagatagaagtgagacggttgatgtagataccgggaatccagttgcatggta 1093234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 255 - 317
Target Start/End: Original strand, 30900111 - 30900173
Alignment:
Q  255 cactacttgacaacattttgtactaaatagtgtatcgcggaacaatggggatttgttcaaatt 317  Q
    ||||| || |||| |||||||||||||||||||||||| ||||||| | |||| |||||||||    
T  30900111 cactatttcacaatattttgtactaaatagtgtatcgctgaacaatagcgattcgttcaaatt 30900173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 263 - 317
Target Start/End: Complemental strand, 39417816 - 39417762
Alignment:
Q  263 gacaacattttgtactaaatagtgtatcgcggaacaatggggatttgttcaaatt 317  Q
    ||||||||||||||||| ||||  |||||||||||||| | ||||||||||||||    
T  39417816 gacaacattttgtactatatagcatatcgcggaacaatagtgatttgttcaaatt 39417762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 261 - 300
Target Start/End: Original strand, 28613249 - 28613288
Alignment:
Q  261 ttgacaacattttgtactaaatagtgtatcgcggaacaat 300  Q
    ||||||||||||||||||| ||||||||||| ||||||||    
T  28613249 ttgacaacattttgtactatatagtgtatcgtggaacaat 28613288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 261 - 319
Target Start/End: Complemental strand, 33581784 - 33581726
Alignment:
Q  261 ttgacaacattttgtactaaatagtgtatcgcggaacaatggggatttgttcaaatttc 319  Q
    |||||||||| |||||  |||||| ||||| || |||||||| ||||||||||||||||    
T  33581784 ttgacaacatattgtatcaaatagcgtatcccgtaacaatggtgatttgttcaaatttc 33581726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 263 - 317
Target Start/End: Original strand, 46404620 - 46404674
Alignment:
Q  263 gacaacattttgtactaaatagtgtatcgcggaacaatggggatttgttcaaatt 317  Q
    ||||| ||||| ||||||||||||||||| |||||||| |  |||||||||||||    
T  46404620 gacaatattttatactaaatagtgtatcgtggaacaatagatatttgttcaaatt 46404674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 263 - 292
Target Start/End: Complemental strand, 8095946 - 8095917
Alignment:
Q  263 gacaacattttgtactaaatagtgtatcgc 292  Q
    ||||||||||||||||||||||||||||||    
T  8095946 gacaacattttgtactaaatagtgtatcgc 8095917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 256 - 317
Target Start/End: Complemental strand, 38921323 - 38921262
Alignment:
Q  256 actacttgacaacattttgtactaaatagtgtatcgcggaacaatggggatttgttcaaatt 317  Q
    ||||||| |||| |||||| |||||||||| |||||| ||||||  | ||||||||||||||    
T  38921323 actacttcacaatattttgcactaaatagtatatcgcagaacaacagtgatttgttcaaatt 38921262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 261 - 317
Target Start/End: Complemental strand, 25268874 - 25268818
Alignment:
Q  261 ttgacaacattttgtactaaatagtgtatcgcggaacaatggggatttgttcaaatt 317  Q
    ||||||| ||||| ||||||||||||||| || |||||||   ||||||||||||||    
T  25268874 ttgacaatattttatactaaatagtgtatagcagaacaataacgatttgttcaaatt 25268818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 266 - 302
Target Start/End: Complemental strand, 26848564 - 26848528
Alignment:
Q  266 aacattttgtactaaatagtgtatcgcggaacaatgg 302  Q
    |||||||||||||||||||||||| ||| ||||||||    
T  26848564 aacattttgtactaaatagtgtattgcgaaacaatgg 26848528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 261 - 317
Target Start/End: Original strand, 38622884 - 38622940
Alignment:
Q  261 ttgacaacattttgtactaaatagtgtatcgcggaacaatggggatttgttcaaatt 317  Q
    ||||||||||||||| ||||||||||||||  ||||||||   ||||| ||||||||    
T  38622884 ttgacaacattttgtgctaaatagtgtatcatggaacaatatcgatttattcaaatt 38622940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 44; Significance: 9e-16; HSPs: 15)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 255 - 318
Target Start/End: Complemental strand, 9163818 - 9163755
Alignment:
Q  255 cactacttgacaacattttgtactaaatagtgtatcgcggaacaatggggatttgttcaaattt 318  Q
    ||||| |||||||||||||||||||||||| ||||  ||||||||| |||||||||||||||||    
T  9163818 cactatttgacaacattttgtactaaatagcgtataacggaacaatagggatttgttcaaattt 9163755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 261 - 317
Target Start/End: Complemental strand, 21869919 - 21869863
Alignment:
Q  261 ttgacaacattttgtactaaatagtgtatcgcggaacaatggggatttgttcaaatt 317  Q
    |||||||||||||||||||||||||||||| |||||||||   ||||||||| ||||    
T  21869919 ttgacaacattttgtactaaatagtgtatcacggaacaataatgatttgttcgaatt 21869863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 261 - 317
Target Start/End: Original strand, 32136349 - 32136405
Alignment:
Q  261 ttgacaacattttgtactaaatagtgtatcgcggaacaatggggatttgttcaaatt 317  Q
    ||||||||||||| ||||||||||||||||| ||||||| || |||||||| |||||    
T  32136349 ttgacaacattttatactaaatagtgtatcgtggaacaacggagatttgtttaaatt 32136405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 261 - 319
Target Start/End: Original strand, 1912511 - 1912569
Alignment:
Q  261 ttgacaacattttgtactaaatagtgtatcgcggaacaatggggatttgttcaaatttc 319  Q
    ||||||| | ||||||||||||||| |||||| ||||||| | ||||||||||||||||    
T  1912511 ttgacaataatttgtactaaatagtatatcgcagaacaatagcgatttgttcaaatttc 1912569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 261 - 319
Target Start/End: Complemental strand, 2732992 - 2732934
Alignment:
Q  261 ttgacaacattttgtactaaatagtgtatcgcggaacaatggggatttgttcaaatttc 319  Q
    ||||||||||||||||||||||||  ||||||  |||||| | ||||||||||||||||    
T  2732992 ttgacaacattttgtactaaatagcatatcgcaaaacaatagcgatttgttcaaatttc 2732934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 261 - 319
Target Start/End: Complemental strand, 21869286 - 21869228
Alignment:
Q  261 ttgacaacattttgtactaaatagtgtatcgcggaacaatggggatttgttcaaatttc 319  Q
    |||||| || ||| ||||||||||||||  |||||||||||| ||||||||||||||||    
T  21869286 ttgacagcactttttactaaatagtgtactgcggaacaatggtgatttgttcaaatttc 21869228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 255 - 340
Target Start/End: Original strand, 15724715 - 15724799
Alignment:
Q  255 cactacttgacaacattttgtactaaatagtgtatcgcggaacaatggggatttgttcaaatttctctgcaccatagcgccgctat 340  Q
    ||||| ||||||||||||| ||| |||||| ||||  ||||||||| |||||||||||||||||  || ||| |||||||| ||||    
T  15724715 cactatttgacaacattttataccaaatagcgtata-cggaacaatagggatttgttcaaattttgctacactatagcgccactat 15724799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 261 - 317
Target Start/End: Original strand, 33532496 - 33532552
Alignment:
Q  261 ttgacaacattttgtactaaatagtgtatcgcggaacaatggggatttgttcaaatt 317  Q
    ||||||||||| |||||||||||| |||| | | |||||||| ||||||||||||||    
T  33532496 ttgacaacattctgtactaaatagcgtatagtgtaacaatggcgatttgttcaaatt 33532552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 264 - 299
Target Start/End: Original strand, 4354351 - 4354386
Alignment:
Q  264 acaacattttgtactaaatagtgtatcgcggaacaa 299  Q
    |||||||||||||||||||||||||| |||||||||    
T  4354351 acaacattttgtactaaatagtgtatagcggaacaa 4354386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 262 - 300
Target Start/End: Original strand, 14933031 - 14933069
Alignment:
Q  262 tgacaacattttgtactaaatagtgtatcgcggaacaat 300  Q
    |||||||||||||||||||||||||||| || |||||||    
T  14933031 tgacaacattttgtactaaatagtgtattgcagaacaat 14933069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 271 - 320
Target Start/End: Original strand, 10334672 - 10334721
Alignment:
Q  271 tttgtactaaatagtgtatcgcggaacaatggggatttgttcaaatttct 320  Q
    ||||||||||||||||||||| |||||||  |  ||||||||||||||||    
T  10334672 tttgtactaaatagtgtatcgtggaacaagagctatttgttcaaatttct 10334721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 255 - 300
Target Start/End: Original strand, 31694721 - 31694766
Alignment:
Q  255 cactacttgacaacattttgtactaaatagtgtatcgcggaacaat 300  Q
    ||||| |||| ||||||||||||||||||||||||| | |||||||    
T  31694721 cactatttgaaaacattttgtactaaatagtgtatcacagaacaat 31694766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 261 - 349
Target Start/End: Original strand, 10156679 - 10156767
Alignment:
Q  261 ttgacaacattttgtactaaatagtgtatcgcggaacaatggggatttgttcaaatttctctgcaccatagcgccgctatgtaacaaca 349  Q
    ||||||||||||| |||| |||||||| |||| |||||||    ||||||||||||| | |  ||| ||||| ||||||| ||||||||    
T  10156679 ttgacaacattttatacttaatagtgtgtcgcagaacaataaaaatttgttcaaattccacaacactatagcaccgctatttaacaaca 10156767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 261 - 317
Target Start/End: Complemental strand, 24769365 - 24769309
Alignment:
Q  261 ttgacaacattttgtactaaatagtgtatcgcggaacaatggggatttgttcaaatt 317  Q
    ||||||| | ||||||||||||||||||| || |||||||   ||||||||||||||    
T  24769365 ttgacaatactttgtactaaatagtgtattgcagaacaataatgatttgttcaaatt 24769309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 255 - 319
Target Start/End: Complemental strand, 26373145 - 26373081
Alignment:
Q  255 cactacttgacaacattttgtactaaatagtgtatcgcggaacaatggggatttgttcaaatttc 319  Q
    ||||| ||||||||| |||||||||||||| ||||| | ||||||| | || |||||||| ||||    
T  26373145 cactatttgacaacactttgtactaaatagcgtatcacagaacaatagtgagttgttcaattttc 26373081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 41; Significance: 0.00000000000006; HSPs: 10)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 261 - 317
Target Start/End: Original strand, 43391539 - 43391595
Alignment:
Q  261 ttgacaacattttgtactaaatagtgtatcgcggaacaatggggatttgttcaaatt 317  Q
    |||||||||||||||||||||||||| |||| |||||||| | ||||||||||||||    
T  43391539 ttgacaacattttgtactaaatagtgcatcggggaacaatagcgatttgttcaaatt 43391595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 255 - 317
Target Start/End: Original strand, 6025969 - 6026031
Alignment:
Q  255 cactacttgacaacattttgtactaaatagtgtatcgcggaacaatggggatttgttcaaatt 317  Q
    ||||| ||||||||||||||||||||||||  ||||||||||||||    |||||||||||||    
T  6025969 cactatttgacaacattttgtactaaatagcatatcgcggaacaataactatttgttcaaatt 6026031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 269 - 317
Target Start/End: Complemental strand, 3950721 - 3950673
Alignment:
Q  269 attttgtactaaatagtgtatcgcggaacaatggggatttgttcaaatt 317  Q
    |||| ||||||||||| ||||||||||||||| | ||||||||||||||    
T  3950721 atttggtactaaatagcgtatcgcggaacaatagtgatttgttcaaatt 3950673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 261 - 315
Target Start/End: Original strand, 12913243 - 12913297
Alignment:
Q  261 ttgacaacattttgtactaaatagtgtatcgcggaacaatggggatttgttcaaa 315  Q
    ||||||||| || |||| ||||||||||||| |||||||||| | ||||||||||    
T  12913243 ttgacaacacttggtacaaaatagtgtatcgtggaacaatggcgctttgttcaaa 12913297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 261 - 319
Target Start/End: Original strand, 15606334 - 15606392
Alignment:
Q  261 ttgacaacattttgtactaaatagtgtatcgcggaacaatggggatttgttcaaatttc 319  Q
    ||||||||||||||||||||||||  ||| || ||||||| | |||||||| |||||||    
T  15606334 ttgacaacattttgtactaaatagcatatagcagaacaatagtgatttgtttaaatttc 15606392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 257 - 323
Target Start/End: Complemental strand, 35488342 - 35488276
Alignment:
Q  257 ctacttgacaacattttgtactaaatagtgtatcgcggaacaatggggatttgttcaaatttctctg 323  Q
    ||||||||||| | || ||||||||||| ||||| ||||||||| |   ||||||||||||||||||    
T  35488342 ctacttgacaaaacttcgtactaaatagcgtatcccggaacaatagcagtttgttcaaatttctctg 35488276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 264 - 317
Target Start/End: Complemental strand, 49165422 - 49165369
Alignment:
Q  264 acaacattttgtactaaatagtgtatcgcggaacaatggggatttgttcaaatt 317  Q
    ||||||||||||| |||||||||||| |  ||||||| | ||||||||||||||    
T  49165422 acaacattttgtattaaatagtgtatggtagaacaatcgtgatttgttcaaatt 49165369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 261 - 317
Target Start/End: Complemental strand, 3335201 - 3335145
Alignment:
Q  261 ttgacaacattttgtactaaatagtgtatcgcggaacaatggggatttgttcaaatt 317  Q
    ||||||||| ||| ||||||| || || |||||||||||| | ||||||||||||||    
T  3335201 ttgacaacactttatactaaacagggtgtcgcggaacaatagtgatttgttcaaatt 3335145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 261 - 317
Target Start/End: Original strand, 14643206 - 14643262
Alignment:
Q  261 ttgacaacattttgtactaaatagtgtatcgcggaacaatggggatttgttcaaatt 317  Q
    |||| ||||| || |||||||||| ||||||| |||||||||  |||||||||||||    
T  14643206 ttgaaaacatcttctactaaatagcgtatcgctgaacaatggcaatttgttcaaatt 14643262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 261 - 317
Target Start/End: Complemental strand, 15956934 - 15956878
Alignment:
Q  261 ttgacaacattttgtactaaatagtgtatcgcggaacaatggggatttgttcaaatt 317  Q
    ||||||||| |||||||||||||| |||| ||||||||||    |||||||||||||    
T  15956934 ttgacaacactttgtactaaatagcgtatggcggaacaataacaatttgttcaaatt 15956878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 39; Significance: 0.0000000000009; HSPs: 4)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 261 - 311
Target Start/End: Original strand, 2843586 - 2843636
Alignment:
Q  261 ttgacaacattttgtactaaatagtgtatcgcggaacaatggggatttgtt 311  Q
    |||||||||||||||||||||||||||||||| ||||||| | ||||||||    
T  2843586 ttgacaacattttgtactaaatagtgtatcgcagaacaatagtgatttgtt 2843636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 261 - 319
Target Start/End: Original strand, 13458794 - 13458852
Alignment:
Q  261 ttgacaacattttgtactaaatagtgtatcgcggaacaatggggatttgttcaaatttc 319  Q
    ||||||||| ||| |||||||||| ||||  ||||||||||| ||||||||||||||||    
T  13458794 ttgacaacactttatactaaatagcgtattacggaacaatggtgatttgttcaaatttc 13458852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 261 - 300
Target Start/End: Complemental strand, 34581635 - 34581596
Alignment:
Q  261 ttgacaacattttgtactaaatagtgtatcgcggaacaat 300  Q
    |||||||||||||||||||||||| ||||| |||||||||    
T  34581635 ttgacaacattttgtactaaatagcgtatcacggaacaat 34581596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 261 - 317
Target Start/End: Complemental strand, 34416963 - 34416907
Alignment:
Q  261 ttgacaacattttgtactaaatagtgtatcgcggaacaatggggatttgttcaaatt 317  Q
    ||||||||| |||||||||||||| | ||||||||||||| |  |||||||| ||||    
T  34416963 ttgacaacactttgtactaaatagaggatcgcggaacaatagctatttgttccaatt 34416907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 39; Significance: 0.0000000000009; HSPs: 11)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 261 - 319
Target Start/End: Complemental strand, 21754294 - 21754236
Alignment:
Q  261 ttgacaacattttgtactaaatagtgtatcgcggaacaatggggatttgttcaaatttc 319  Q
    ||||||||| |||||||||||||||||||||||||||||| | |||||||  |||||||    
T  21754294 ttgacaacaatttgtactaaatagtgtatcgcggaacaatagcgatttgtctaaatttc 21754236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 243 - 319
Target Start/End: Original strand, 2990968 - 2991045
Alignment:
Q  243 agtgctatagggc-actacttgacaacattttgtactaaatagtgtatcgcggaacaatggggatttgttcaaatttc 319  Q
    |||| |||||||| |||| |||||||||||||||||||||||| |||||| |||||||  |  |||||||||||||||    
T  2990968 agtgatatagggccactatttgacaacattttgtactaaatagcgtatcgtggaacaaaagaaatttgttcaaatttc 2991045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 261 - 298
Target Start/End: Original strand, 2101663 - 2101700
Alignment:
Q  261 ttgacaacattttgtactaaatagtgtatcgcggaaca 298  Q
    ||||||||| ||||||||||||||||||||||||||||    
T  2101663 ttgacaacactttgtactaaatagtgtatcgcggaaca 2101700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 255 - 315
Target Start/End: Original strand, 20690079 - 20690139
Alignment:
Q  255 cactacttgacaacattttgtactaaatagtgtatcgcggaacaatggggatttgttcaaa 315  Q
    ||||| |||| |||||||||  |||||||||||||||| ||||||| | ||||||||||||    
T  20690079 cactatttgataacattttgctctaaatagtgtatcgccgaacaatagcgatttgttcaaa 20690139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 271 - 317
Target Start/End: Complemental strand, 16792331 - 16792285
Alignment:
Q  271 tttgtactaaatagtgtatcgcggaacaatggggatttgttcaaatt 317  Q
    ||||||||||||| |||||||||||||||| | | ||||||||||||    
T  16792331 tttgtactaaatattgtatcgcggaacaatagtggtttgttcaaatt 16792285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 272 - 317
Target Start/End: Original strand, 3728422 - 3728467
Alignment:
Q  272 ttgtactaaatagtgtatcgcggaacaatggggatttgttcaaatt 317  Q
    ||||| ||||||||||||||| ||||||||  ||||||||||||||    
T  3728422 ttgtagtaaatagtgtatcgcagaacaatgaagatttgttcaaatt 3728467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 271 - 300
Target Start/End: Original strand, 9279862 - 9279891
Alignment:
Q  271 tttgtactaaatagtgtatcgcggaacaat 300  Q
    ||||||||||||||||||||||||||||||    
T  9279862 tttgtactaaatagtgtatcgcggaacaat 9279891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 263 - 316
Target Start/End: Complemental strand, 25252094 - 25252041
Alignment:
Q  263 gacaacattttgtactaaatagtgtatcgcggaacaatggggatttgttcaaat 316  Q
    |||||||||||||||||||||| ||||| || |||||  | |||||||||||||    
T  25252094 gacaacattttgtactaaatagcgtatcacgaaacaagagcgatttgttcaaat 25252041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 263 - 300
Target Start/End: Complemental strand, 33726946 - 33726909
Alignment:
Q  263 gacaacattttgtactaaatagtgtatcgcggaacaat 300  Q
    |||| |||||||||||||||||| ||||||||||||||    
T  33726946 gacaccattttgtactaaatagtatatcgcggaacaat 33726909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 255 - 300
Target Start/End: Complemental strand, 51295744 - 51295699
Alignment:
Q  255 cactacttgacaacattttgtactaaatagtgtatcgcggaacaat 300  Q
    ||||||| |||||||||||||||||||||| ||||| || ||||||    
T  51295744 cactactcgacaacattttgtactaaatagcgtatcacgaaacaat 51295699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 268 - 316
Target Start/End: Complemental strand, 3133521 - 3133473
Alignment:
Q  268 cattttgtactaaatagtgtatcgcggaacaatggggatttgttcaaat 316  Q
    ||||||||||||||||||||||| || |||||| |  ||||||||||||    
T  3133521 cattttgtactaaatagtgtatcacgtaacaatagctatttgttcaaat 3133473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 38; Significance: 0.000000000004; HSPs: 6)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 264 - 317
Target Start/End: Original strand, 8284356 - 8284409
Alignment:
Q  264 acaacattttgtactaaatagtgtatcgcggaacaatggggatttgttcaaatt 317  Q
    |||||| ||||||||||| || ||||||||||||||||| ||||||||||||||    
T  8284356 acaacactttgtactaaaaagcgtatcgcggaacaatggtgatttgttcaaatt 8284409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 261 - 317
Target Start/End: Complemental strand, 16950311 - 16950255
Alignment:
Q  261 ttgacaacattttgtactaaatagtgtatcgcggaacaatggggatttgttcaaatt 317  Q
    ||||||||||||||||||||||| ||||||| ||||||| |   |||||||||||||    
T  16950311 ttgacaacattttgtactaaataatgtatcgtggaacaaagataatttgttcaaatt 16950255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 265 - 300
Target Start/End: Original strand, 11412605 - 11412640
Alignment:
Q  265 caacattttgtactaaatagtgtatcgcggaacaat 300  Q
    |||||||||||||||||||||||||||| |||||||    
T  11412605 caacattttgtactaaatagtgtatcgcagaacaat 11412640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 255 - 299
Target Start/End: Complemental strand, 78145 - 78101
Alignment:
Q  255 cactacttgacaacattttgtactaaatagtgtatcgcggaacaa 299  Q
    ||||||||||||||| ||||||||| |||| ||||||| ||||||    
T  78145 cactacttgacaacactttgtactagatagcgtatcgcagaacaa 78101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 269 - 317
Target Start/End: Original strand, 10354835 - 10354882
Alignment:
Q  269 attttgtactaaatagtgtatcgcggaacaatggggatttgttcaaatt 317  Q
    ||||||| |||||||| |||||| |||||||||| ||||||||||||||    
T  10354835 attttgtgctaaatag-gtatcgtggaacaatggtgatttgttcaaatt 10354882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 261 - 317
Target Start/End: Original strand, 45371103 - 45371159
Alignment:
Q  261 ttgacaacattttgtactaaatagtgtatcgcggaacaatggggatttgttcaaatt 317  Q
    ||||||||||||||||||||||||  ||| |||||||||| | | ||||| ||||||    
T  45371103 ttgacaacattttgtactaaatagcatattgcggaacaatagtggtttgtccaaatt 45371159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 37; Significance: 0.00000000001; HSPs: 10)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 261 - 317
Target Start/End: Complemental strand, 27725563 - 27725507
Alignment:
Q  261 ttgacaacattttgtactaaatagtgtatcgcggaacaatggggatttgttcaaatt 317  Q
    ||||||| |||||||||||||||||| || |||||||||| | ||||||||||||||    
T  27725563 ttgacaatattttgtactaaatagtggattgcggaacaattgtgatttgttcaaatt 27725507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 261 - 318
Target Start/End: Original strand, 41399575 - 41399632
Alignment:
Q  261 ttgacaacattttgtactaaatagtgtatcgcggaacaatggggatttgttcaaattt 318  Q
    |||||||||||||||||||||||||||||| ||| |||||   ||||| |||||||||    
T  41399575 ttgacaacattttgtactaaatagtgtatcacggcacaatattgatttattcaaattt 41399632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 255 - 290
Target Start/End: Complemental strand, 4787974 - 4787939
Alignment:
Q  255 cactacttgacaacattttgtactaaatagtgtatc 290  Q
    ||||| ||||||||||||||||||||||||||||||    
T  4787974 cactatttgacaacattttgtactaaatagtgtatc 4787939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 261 - 296
Target Start/End: Original strand, 13996379 - 13996414
Alignment:
Q  261 ttgacaacattttgtactaaatagtgtatcgcggaa 296  Q
    |||||||||||||||||||||||| |||||||||||    
T  13996379 ttgacaacattttgtactaaatagcgtatcgcggaa 13996414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 255 - 314
Target Start/End: Original strand, 28734171 - 28734230
Alignment:
Q  255 cactacttgacaacattttgtactaaatagtgtatcgcggaacaatggggatttgttcaa 314  Q
    ||||| ||||||||  |||||||||||||| ||||| |||||||||| |||||| |||||    
T  28734171 cactatttgacaactctttgtactaaatagcgtatcacggaacaatgaggattttttcaa 28734230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 258 - 292
Target Start/End: Original strand, 10389969 - 10390003
Alignment:
Q  258 tacttgacaacattttgtactaaatagtgtatcgc 292  Q
    ||||||||||||||||||| |||||||||||||||    
T  10389969 tacttgacaacattttgtaataaatagtgtatcgc 10390003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 261 - 317
Target Start/End: Original strand, 7477559 - 7477615
Alignment:
Q  261 ttgacaacattttgtactaaatagtgtatcgcggaacaatggggatttgttcaaatt 317  Q
    ||||||||| |||||||||||||||  ||||||||||||| | ||||| || |||||    
T  7477559 ttgacaacactttgtactaaatagtaaatcgcggaacaatagtgatttattaaaatt 7477615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 261 - 317
Target Start/End: Complemental strand, 16033089 - 16033033
Alignment:
Q  261 ttgacaacattttgtactaaatagtgtatcgcggaacaatggggatttgttcaaatt 317  Q
    |||||||||||||||||||| ||| |||| ||| |||||  | ||||||||||||||    
T  16033089 ttgacaacattttgtactaagtagcgtattgcgtaacaaaagagatttgttcaaatt 16033033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 261 - 317
Target Start/End: Complemental strand, 38346918 - 38346862
Alignment:
Q  261 ttgacaacattttgtactaaatagtgtatcgcggaacaatggggatttgttcaaatt 317  Q
    |||||||||||||||| ||||||||||||| | ||||||| | || || ||||||||    
T  38346918 ttgacaacattttgtagtaaatagtgtatcacagaacaatagtgactttttcaaatt 38346862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 261 - 317
Target Start/End: Original strand, 43283419 - 43283475
Alignment:
Q  261 ttgacaacattttgtactaaatagtgtatcgcggaacaatggggatttgttcaaatt 317  Q
    ||||||||||||||| | |||||| |||| |||||||||  | ||||||||||||||    
T  43283419 ttgacaacattttgtcccaaatagcgtattgcggaacaacagcgatttgttcaaatt 43283475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 36; Significance: 0.00000000005; HSPs: 8)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 264 - 319
Target Start/End: Complemental strand, 11530082 - 11530027
Alignment:
Q  264 acaacattttgtactaaatagtgtatcgcggaacaatggggatttgttcaaatttc 319  Q
    |||| ||| |||||||||||||||||||| ||||||| | ||||||||||||||||    
T  11530082 acaatattatgtactaaatagtgtatcgcagaacaatagtgatttgttcaaatttc 11530027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 261 - 290
Target Start/End: Original strand, 10547216 - 10547245
Alignment:
Q  261 ttgacaacattttgtactaaatagtgtatc 290  Q
    ||||||||||||||||||||||||||||||    
T  10547216 ttgacaacattttgtactaaatagtgtatc 10547245  T

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Target: chr2; HSP #3
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 261 - 318
Target Start/End: Complemental strand, 26174981 - 26174925
Alignment:
Q  261 ttgacaacattttgtactaaatagtgtatcgcggaacaatggggatttgttcaaattt 318  Q
    |||||||||| || |||||||||||||||||| |||||||  | ||||||||||||||    
T  26174981 ttgacaacatattatactaaatagtgtatcgcagaacaat-agcatttgttcaaattt 26174925  T

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Target: chr2; HSP #4
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 254 - 299
Target Start/End: Complemental strand, 35928329 - 35928284
Alignment:
Q  254 gcactacttgacaacattttgtactaaatagtgtatcgcggaacaa 299  Q
    |||||| |||||||||||||||||| || |||||||| ||||||||    
T  35928329 gcactatttgacaacattttgtactcaacagtgtatcacggaacaa 35928284  T

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Target: chr2; HSP #5
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 264 - 317
Target Start/End: Complemental strand, 39597630 - 39597577
Alignment:
Q  264 acaacattttgtactaaatagtgtatcgcggaacaatggggatttgttcaaatt 317  Q
    |||| |||||||||||||||| ||||||||||||||| | ||||| || |||||    
T  39597630 acaatattttgtactaaatagcgtatcgcggaacaatagcgatttatttaaatt 39597577  T

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Target: chr2; HSP #6
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 261 - 290
Target Start/End: Complemental strand, 44460387 - 44460358
Alignment:
Q  261 ttgacaacattttgtactaaatagtgtatc 290  Q
    ||||||||||||||||||||||||||||||    
T  44460387 ttgacaacattttgtactaaatagtgtatc 44460358  T

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Target: chr2; HSP #7
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 269 - 317
Target Start/End: Complemental strand, 18264857 - 18264809
Alignment:
Q  269 attttgtactaaatagtgtatcgcggaacaatggggatttgttcaaatt 317  Q
    ||||||||||||||| ||||| | | |||||||| ||||||||||||||    
T  18264857 attttgtactaaatattgtatagtgcaacaatggtgatttgttcaaatt 18264809  T

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Target: chr2; HSP #8
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 261 - 317
Target Start/End: Original strand, 44458233 - 44458289
Alignment:
Q  261 ttgacaacattttgtactaaatagtgtatcgcggaacaatggggatttgttcaaatt 317  Q
    ||||||| | ||||||||||||| |||||||||||||||| | | ||||||| ||||    
T  44458233 ttgacaatactttgtactaaatattgtatcgcggaacaatagcggtttgttcgaatt 44458289  T

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Target: scaffold0913 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0913
Description:

Target: scaffold0913; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 261 - 300
Target Start/End: Original strand, 1283 - 1322
Alignment:
Q  261 ttgacaacattttgtactaaatagtgtatcgcggaacaat 300  Q
    ||||||||| |||||||||||||||||||| |||||||||    
T  1283 ttgacaacactttgtactaaatagtgtatcacggaacaat 1322  T

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Target: scaffold0898 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0898
Description:

Target: scaffold0898; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 261 - 300
Target Start/End: Complemental strand, 4318 - 4279
Alignment:
Q  261 ttgacaacattttgtactaaatagtgtatcgcggaacaat 300  Q
    ||||||||| |||||||||||||||||||| |||||||||    
T  4318 ttgacaacactttgtactaaatagtgtatcacggaacaat 4279  T

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