View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF15970_low_2 (Length: 625)

Name: NF15970_low_2
Description: NF15970
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF15970_low_2
NF15970_low_2
[»] chr5 (53 HSPs)
chr5 (12-606)||(36774626-36775221)
chr5 (112-190)||(12242729-12242806)
chr5 (112-190)||(29116969-29117048)
chr5 (71-145)||(8177510-8177584)
chr5 (63-164)||(12521526-12521628)
chr5 (83-156)||(40205064-40205137)
chr5 (72-156)||(14257472-14257556)
chr5 (88-160)||(32408587-32408659)
chr5 (73-156)||(2880527-2880610)
chr5 (112-214)||(3951835-3951937)
chr5 (63-190)||(10280569-10280694)
chr5 (66-157)||(41957424-41957515)
chr5 (63-157)||(14295512-14295606)
chr5 (168-249)||(26516190-26516271)
chr5 (115-157)||(29844969-29845011)
chr5 (112-162)||(37611234-37611284)
chr5 (112-162)||(37787964-37788014)
chr5 (112-157)||(10798431-10798476)
chr5 (112-157)||(36638753-36638798)
chr5 (112-184)||(13605392-13605462)
chr5 (112-160)||(16328869-16328916)
chr5 (112-156)||(17368683-17368727)
chr5 (112-156)||(18543216-18543259)
chr5 (112-148)||(31030149-31030185)
chr5 (112-148)||(34975379-34975415)
chr5 (112-160)||(35553207-35553255)
chr5 (112-156)||(37588379-37588423)
chr5 (112-184)||(985591-985664)
chr5 (109-160)||(4619710-4619761)
chr5 (63-146)||(28586736-28586819)
chr5 (118-156)||(5946704-5946742)
chr5 (119-197)||(7096175-7096252)
chr5 (114-160)||(7319029-7319075)
chr5 (71-160)||(8651330-8651419)
chr5 (112-158)||(26005016-26005062)
chr5 (119-149)||(30217096-30217126)
chr5 (112-149)||(3970699-3970736)
chr5 (112-157)||(4014443-4014488)
chr5 (112-157)||(17258902-17258947)
chr5 (112-157)||(18875367-18875412)
chr5 (112-149)||(19460581-19460618)
chr5 (123-156)||(28982017-28982050)
chr5 (116-157)||(29201539-29201580)
chr5 (124-157)||(38047886-38047919)
chr5 (112-149)||(38104876-38104913)
chr5 (111-156)||(43300885-43300930)
chr5 (112-156)||(15074768-15074812)
chr5 (112-160)||(18906345-18906393)
chr5 (112-148)||(26390809-26390845)
chr5 (112-156)||(27565369-27565413)
chr5 (112-156)||(33533558-33533602)
chr5 (112-156)||(37526218-37526262)
chr5 (112-156)||(40731476-40731520)
[»] chr3 (40 HSPs)
chr3 (112-224)||(44284099-44284211)
chr3 (112-225)||(48528494-48528607)
chr3 (63-160)||(37273137-37273234)
chr3 (74-165)||(37825120-37825212)
chr3 (112-212)||(49586955-49587056)
chr3 (112-157)||(24887302-24887347)
chr3 (112-224)||(36200035-36200147)
chr3 (118-157)||(24158528-24158567)
chr3 (116-185)||(22667382-22667451)
chr3 (116-185)||(22724021-22724090)
chr3 (112-158)||(40608400-40608446)
chr3 (112-156)||(14548740-14548784)
chr3 (63-159)||(21574494-21574590)
chr3 (112-160)||(33725893-33725941)
chr3 (112-160)||(38462284-38462332)
chr3 (72-156)||(39311658-39311742)
chr3 (64-136)||(43115083-43115155)
chr3 (128-175)||(659880-659927)
chr3 (66-157)||(1217773-1217864)
chr3 (112-218)||(39971242-39971348)
chr3 (114-160)||(2719471-2719517)
chr3 (63-133)||(11039309-11039379)
chr3 (151-197)||(22232771-22232816)
chr3 (112-175)||(52323913-52323978)
chr3 (112-173)||(12985364-12985425)
chr3 (112-157)||(13709842-13709887)
chr3 (112-157)||(20502087-20502132)
chr3 (112-157)||(20669178-20669223)
chr3 (63-156)||(24624217-24624310)
chr3 (120-212)||(34958257-34958348)
chr3 (112-156)||(1816590-1816634)
chr3 (147-210)||(5430957-5431020)
chr3 (112-156)||(21367674-21367718)
chr3 (112-160)||(23785258-23785306)
chr3 (116-156)||(24785212-24785252)
chr3 (112-160)||(34254827-34254875)
chr3 (62-154)||(34382951-34383043)
chr3 (72-156)||(36646361-36646445)
chr3 (116-156)||(49465688-49465728)
chr3 (116-156)||(51510216-51510256)
[»] chr8 (51 HSPs)
chr8 (112-219)||(20672694-20672801)
chr8 (64-247)||(39392653-39392837)
chr8 (115-175)||(33553228-33553288)
chr8 (112-156)||(39881771-39881815)
chr8 (66-156)||(30259121-30259211)
chr8 (72-165)||(9540975-9541068)
chr8 (112-224)||(36643912-36644024)
chr8 (112-156)||(43504758-43504802)
chr8 (198-249)||(2107453-2107504)
chr8 (63-157)||(6509273-6509367)
chr8 (63-157)||(11569427-11569521)
chr8 (112-217)||(14949812-14949917)
chr8 (199-253)||(31875687-31875741)
chr8 (106-160)||(38036125-38036179)
chr8 (112-157)||(8060675-8060720)
chr8 (112-157)||(11183551-11183596)
chr8 (112-197)||(14929157-14929241)
chr8 (112-157)||(27028837-27028882)
chr8 (112-157)||(30277264-30277309)
chr8 (112-175)||(1112223-1112286)
chr8 (112-155)||(1433556-1433599)
chr8 (66-157)||(28769312-28769403)
chr8 (63-154)||(30191111-30191202)
chr8 (87-149)||(11795106-11795168)
chr8 (118-156)||(13652222-13652260)
chr8 (118-156)||(13710865-13710903)
chr8 (112-154)||(42215101-42215143)
chr8 (112-154)||(42215325-42215367)
chr8 (112-150)||(44401574-44401612)
chr8 (112-154)||(44617808-44617850)
chr8 (112-149)||(2458585-2458622)
chr8 (112-157)||(8062335-8062380)
chr8 (112-157)||(11745671-11745716)
chr8 (112-157)||(30013224-30013269)
chr8 (112-157)||(31705091-31705136)
chr8 (151-219)||(42597323-42597391)
chr8 (112-157)||(44236842-44236887)
chr8 (112-156)||(4762516-4762560)
chr8 (72-156)||(5088859-5088943)
chr8 (112-156)||(7645985-7646029)
chr8 (112-160)||(7646209-7646257)
chr8 (112-156)||(7918792-7918836)
chr8 (121-157)||(9836882-9836918)
chr8 (112-160)||(11494149-11494197)
chr8 (66-190)||(13000397-13000520)
chr8 (112-156)||(29973088-29973132)
chr8 (112-156)||(31862500-31862544)
chr8 (116-160)||(35220746-35220790)
chr8 (119-175)||(40280253-40280309)
chr8 (83-143)||(41606893-41606953)
chr8 (112-160)||(42370380-42370428)
[»] chr6 (35 HSPs)
chr6 (113-197)||(2205610-2205693)
chr6 (63-174)||(2460121-2460232)
chr6 (72-149)||(34939758-34939835)
chr6 (64-150)||(32577957-32578043)
chr6 (64-149)||(34939527-34939612)
chr6 (112-160)||(3168280-3168328)
chr6 (116-175)||(4324476-4324535)
chr6 (112-155)||(27909657-27909700)
chr6 (65-156)||(32386535-32386626)
chr6 (63-157)||(32171353-32171447)
chr6 (152-249)||(32975870-32975967)
chr6 (112-157)||(1275155-1275200)
chr6 (62-135)||(9027606-9027679)
chr6 (112-197)||(31583646-31583730)
chr6 (112-157)||(31686382-31686427)
chr6 (112-157)||(32171473-32171518)
chr6 (112-148)||(4420658-4420694)
chr6 (116-160)||(28088245-28088289)
chr6 (114-157)||(1401115-1401158)
chr6 (71-154)||(2455819-2455902)
chr6 (116-146)||(7945907-7945937)
chr6 (112-150)||(29957941-29957979)
chr6 (112-166)||(32665656-32665710)
chr6 (112-149)||(281867-281904)
chr6 (112-157)||(6654621-6654666)
chr6 (71-156)||(7931704-7931789)
chr6 (119-160)||(19275662-19275703)
chr6 (115-148)||(24836224-24836257)
chr6 (112-157)||(31807865-31807910)
chr6 (112-157)||(33787764-33787809)
chr6 (72-133)||(34404571-34404631)
chr6 (112-156)||(7931808-7931852)
chr6 (112-156)||(10031739-10031783)
chr6 (116-156)||(31812036-31812076)
chr6 (112-160)||(33887833-33887881)
[»] chr7 (39 HSPs)
chr7 (64-217)||(7244626-7244779)
chr7 (147-249)||(31341086-31341188)
chr7 (72-157)||(4966162-4966247)
chr7 (112-156)||(24363620-24363664)
chr7 (112-160)||(28165094-28165142)
chr7 (119-174)||(36059984-36060042)
chr7 (92-156)||(46056009-46056073)
chr7 (112-157)||(9423613-9423658)
chr7 (63-156)||(39360030-39360123)
chr7 (64-148)||(27626094-27626178)
chr7 (72-160)||(33645940-33646027)
chr7 (113-157)||(39334199-39334243)
chr7 (112-156)||(39505963-39506007)
chr7 (114-157)||(6601373-6601416)
chr7 (63-157)||(12242250-12242344)
chr7 (117-197)||(42656460-42656541)
chr7 (112-154)||(12234908-12234950)
chr7 (114-156)||(23721513-23721555)
chr7 (64-157)||(46281111-46281204)
chr7 (112-157)||(514773-514818)
chr7 (112-157)||(12792712-12792757)
chr7 (116-157)||(15321807-15321848)
chr7 (63-172)||(22551375-22551484)
chr7 (112-157)||(27378847-27378892)
chr7 (124-161)||(27517312-27517349)
chr7 (63-100)||(28727733-28727770)
chr7 (116-157)||(30812154-30812195)
chr7 (119-156)||(32210274-32210311)
chr7 (63-148)||(33894642-33894727)
chr7 (112-161)||(35267364-35267413)
chr7 (112-149)||(40428569-40428606)
chr7 (72-157)||(42281493-42281578)
chr7 (66-166)||(47354105-47354209)
chr7 (115-156)||(48917368-48917409)
chr7 (112-156)||(2825250-2825294)
chr7 (112-160)||(21453297-21453345)
chr7 (112-160)||(25596036-25596084)
chr7 (118-158)||(28702755-28702795)
chr7 (121-197)||(35808954-35809029)
[»] chr4 (43 HSPs)
chr4 (114-223)||(4191657-4191767)
chr4 (63-174)||(27123322-27123433)
chr4 (112-225)||(19422334-19422449)
chr4 (112-189)||(5131269-5131349)
chr4 (112-164)||(19429706-19429760)
chr4 (112-166)||(28615520-28615574)
chr4 (71-156)||(4798544-4798629)
chr4 (112-212)||(47970247-47970347)
chr4 (112-160)||(18628562-18628610)
chr4 (112-156)||(39063666-39063710)
chr4 (112-160)||(53673677-53673725)
chr4 (119-197)||(51044506-51044584)
chr4 (82-156)||(29263377-29263451)
chr4 (74-144)||(29467605-29467675)
chr4 (112-157)||(7694029-7694074)
chr4 (112-149)||(14011248-14011285)
chr4 (116-157)||(17975392-17975433)
chr4 (63-156)||(21157775-21157868)
chr4 (91-156)||(42866075-42866140)
chr4 (141-249)||(30024592-30024702)
chr4 (63-154)||(6987711-6987802)
chr4 (122-165)||(50396689-50396732)
chr4 (112-150)||(2592328-2592366)
chr4 (112-150)||(45732686-45732724)
chr4 (112-154)||(51808892-51808934)
chr4 (76-149)||(2874607-2874680)
chr4 (112-173)||(4500836-4500897)
chr4 (116-157)||(12650307-12650348)
chr4 (112-157)||(20105449-20105494)
chr4 (116-190)||(23676668-23676744)
chr4 (112-157)||(35064861-35064906)
chr4 (112-157)||(47800629-47800674)
chr4 (112-157)||(52259637-52259682)
chr4 (124-156)||(7730631-7730663)
chr4 (112-156)||(11158376-11158420)
chr4 (124-156)||(11262794-11262826)
chr4 (112-156)||(11264308-11264352)
chr4 (121-177)||(19304533-19304589)
chr4 (112-148)||(30377434-30377470)
chr4 (112-156)||(35405954-35405998)
chr4 (112-148)||(43824298-43824334)
chr4 (112-160)||(46110206-46110254)
chr4 (112-156)||(50742855-50742899)
[»] chr1 (44 HSPs)
chr1 (72-175)||(23373292-23373394)
chr1 (66-157)||(27140484-27140575)
chr1 (71-197)||(46499852-46499979)
chr1 (112-160)||(4700085-4700133)
chr1 (122-197)||(50319237-50319311)
chr1 (112-197)||(28077088-28077172)
chr1 (63-152)||(43954016-43954104)
chr1 (115-154)||(44422708-44422747)
chr1 (112-225)||(4202170-4202283)
chr1 (119-173)||(29834931-29834985)
chr1 (116-209)||(38651454-38651547)
chr1 (63-160)||(6279402-6279499)
chr1 (124-197)||(26293159-26293231)
chr1 (63-147)||(30259456-30259540)
chr1 (112-157)||(35017582-35017627)
chr1 (112-149)||(35590911-35590948)
chr1 (112-156)||(3924631-3924675)
chr1 (112-156)||(12564518-12564562)
chr1 (112-156)||(25479588-25479632)
chr1 (112-156)||(47598440-47598484)
chr1 (112-151)||(23402043-23402082)
chr1 (63-150)||(28689422-28689509)
chr1 (112-159)||(33723401-33723448)
chr1 (76-172)||(33975559-33975657)
chr1 (112-154)||(5047155-5047197)
chr1 (112-162)||(12641713-12641763)
chr1 (81-143)||(26184768-26184830)
chr1 (115-153)||(26916211-26916249)
chr1 (112-157)||(7137017-7137062)
chr1 (112-149)||(7472325-7472362)
chr1 (91-144)||(10439705-10439758)
chr1 (71-160)||(11639394-11639483)
chr1 (112-145)||(15361058-15361091)
chr1 (112-149)||(26461960-26461997)
chr1 (112-157)||(27820356-27820401)
chr1 (63-160)||(38867801-38867898)
chr1 (112-157)||(51929794-51929839)
chr1 (112-173)||(601029-601092)
chr1 (147-183)||(4548679-4548715)
chr1 (112-156)||(30257690-30257734)
chr1 (112-156)||(32548650-32548694)
chr1 (112-156)||(39347986-39348030)
chr1 (205-253)||(48133073-48133121)
chr1 (151-245)||(48282028-48282124)
[»] chr2 (42 HSPs)
chr2 (112-197)||(32098349-32098433)
chr2 (112-160)||(36852475-36852523)
chr2 (112-159)||(1939351-1939398)
chr2 (74-165)||(7282994-7283085)
chr2 (112-175)||(15203460-15203523)
chr2 (67-157)||(12215813-12215903)
chr2 (112-197)||(33087641-33087723)
chr2 (112-154)||(41817177-41817219)
chr2 (116-157)||(3078663-3078704)
chr2 (63-144)||(25661126-25661207)
chr2 (63-160)||(32821812-32821909)
chr2 (72-156)||(43065429-43065513)
chr2 (76-160)||(8017437-8017521)
chr2 (112-156)||(24097815-24097859)
chr2 (74-154)||(34652017-34652097)
chr2 (112-156)||(35379035-35379079)
chr2 (112-156)||(35485924-35485968)
chr2 (112-156)||(40837454-40837498)
chr2 (114-157)||(10198501-10198544)
chr2 (113-160)||(42409323-42409370)
chr2 (112-154)||(42420006-42420048)
chr2 (112-173)||(3227702-3227763)
chr2 (116-157)||(6167306-6167347)
chr2 (112-149)||(11488291-11488328)
chr2 (112-149)||(15866687-15866724)
chr2 (112-157)||(29316794-29316839)
chr2 (112-157)||(43205315-43205360)
chr2 (114-159)||(43591531-43591576)
chr2 (89-153)||(1741511-1741574)
chr2 (112-156)||(1810671-1810715)
chr2 (112-160)||(8187472-8187520)
chr2 (112-156)||(9477959-9478003)
chr2 (112-160)||(9556242-9556290)
chr2 (112-156)||(11513905-11513949)
chr2 (112-156)||(16867746-16867790)
chr2 (112-160)||(33319831-33319879)
chr2 (115-147)||(35329840-35329872)
chr2 (115-166)||(35391151-35391200)
chr2 (112-219)||(37033966-37034073)
chr2 (112-156)||(39983349-39983393)
chr2 (116-160)||(42817399-42817443)
chr2 (112-156)||(43985022-43985066)
[»] scaffold0003 (1 HSPs)
scaffold0003 (75-156)||(306333-306414)
[»] scaffold0020 (1 HSPs)
scaffold0020 (112-156)||(159992-160036)


Alignment Details
Target: chr5 (Bit Score: 568; Significance: 0; HSPs: 53)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 568; E-Value: 0
Query Start/End: Original strand, 12 - 606
Target Start/End: Original strand, 36774626 - 36775221
Alignment:
Q  12 aatactgcaacacatatttcaaacaagatcacaagttactagtattaaattctgtttgaaagagcttatggaaacggcttatgatatgtcctaaatatgg 111  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||| ||||    
T  36774626 aatactgcaacacatatttcaaacaagatcacaagttactagtattaaattctgtttggaagagcttatggaaacggcttatgacatgtcctaaagatgg 36774725  T
Q  112 tttcagcttatttccataagctctccaggatagcttataaaaacagtttgactttgttttatctatttgttatataaatggcttat-cataagtacttat 210  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  36774726 tttcagcttatttccataagctctccaggatagcttataaaaacagtttgactttgttttatctatttgttatataaatggcttatacataagtacttat 36774825  T
Q  211 atcataagcgcttaagccataaacgcttaattaagttgtctataggtaatatgctaccaacaactttcattgtattggaataacaatgaagtatctaata 310  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  36774826 atcataagcgcttaagccataaacgcttaattaagttgtctataggtaatatgctaccaacaactttcattgtattggaataacaatgaagtatctaata 36774925  T
Q  311 tttaacattaagaatgcacaaaatctacagattttattcatttcctgaacttgatatttctggtacaataaatgtgaaactcaaagttcatatcattatt 410  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  36774926 tttaacattaagaatgcacaaaatctacagattttattcatttcctgaacttgatatttctggtacaataaatgtgaaactcaaagttcatatcattatt 36775025  T
Q  411 tcctcttcataaattacgccatggctagcatctaatgaaactttgccattattgtcatagagagatctagtaaataaattctacaggacaaacactataa 510  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  36775026 tcctcttcttaaattacgccatggctagcatctaatgaaactttgccattattgtcatagagagatctagtaaataaattcttcaggacaaacactataa 36775125  T
Q  511 tgtccatcaaaacagtaatctaataaatgtttggaaggaaacaaaagatgattttccacattggcagcataacttattaattttttcgtcctcatt 606  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  36775126 tgtccatcaaaacagtaatctaataaatgtttggaaggaaacaaaagatgattttccacattggcagcataacttattaattttttcgtcctcatt 36775221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 112 - 190
Target Start/End: Original strand, 12242729 - 12242806
Alignment:
Q  112 tttcagcttatttccataagctctccaggatagcttataaaaacagtttgactttgttttatctatttgttatataaat 190  Q
    |||||||||| |||||||||||||||| |||||||||| |||||| ||||||| | |||||||| ||||||||| ||||    
T  12242729 tttcagcttacttccataagctctccaagatagcttatgaaaacaatttgactctattttatct-tttgttatacaaat 12242806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 112 - 190
Target Start/End: Original strand, 29116969 - 29117048
Alignment:
Q  112 tttcagcttatttccataagctctccaggatagcttata--aaaacagtttgactttgttttatctatttgttatataaat 190  Q
    ||||||||||||| |||||||| | ||||||||||||||  |||||||||||||||| |||||||| ||||||||| ||||    
T  29116969 tttcagcttatttgcataagcttttcaggatagcttatacgaaaacagtttgactttattttatct-tttgttatagaaat 29117048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 71 - 145
Target Start/End: Original strand, 8177510 - 8177584
Alignment:
Q  71 aagagcttatggaaacggcttatgatatgtcctaaatatggtttcagcttatttccataagctctccaggatagc 145  Q
    ||||||| |||||||| |||||||||||||||  ||  || |||||| |||||| ||||||||||||||||||||    
T  8177510 aagagctcatggaaacagcttatgatatgtccataagttgttttcaggttattttcataagctctccaggatagc 8177584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 63 - 164
Target Start/End: Complemental strand, 12521628 - 12521526
Alignment:
Q  63 ctgtttgaaagagcttatggaaacggcttatgatatgtcctaaatatggtttcagcttatttccataagctctccaggatagcttata-aaaacagtttg 161  Q
    ||||||| |||||||| | ||| | ||||||||||||| |  ||  || |||||||||||||||||||||||| ||  |||||||||| |||||||||||    
T  12521628 ctgtttggaagagcttgtagaagctgcttatgatatgttcataagctgttttcagcttatttccataagctcttcaaaatagcttatacaaaacagtttg 12521529  T
Q  162 act 164  Q
    |||    
T  12521528 act 12521526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 83 - 156
Target Start/End: Original strand, 40205064 - 40205137
Alignment:
Q  83 aaacggcttatgatatgtcctaaatatggtttcagcttatttccataagctctccaggatagcttataaaaaca 156  Q
    |||| |||||| | ||||||  ||| || |||||||||||||| ||||||||||||||||||||||| ||||||    
T  40205064 aaacagcttataacatgtccataatctgttttcagcttatttctataagctctccaggatagcttatgaaaaca 40205137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 72 - 156
Target Start/End: Complemental strand, 14257556 - 14257472
Alignment:
Q  72 agagcttatggaaacggcttatgatatgtcctaaatatggtttcagcttatttccataagctctccaggatagcttataaaaaca 156  Q
    ||||||||||||||| |||||||| ||| ||  |||||| ||| ||||| |||||| |||||||||| ||||| |||| ||||||    
T  14257556 agagcttatggaaaccgcttatgacatgcccacaatatgttttaagcttttttccacaagctctccaagatagtttatgaaaaca 14257472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 88 - 160
Target Start/End: Original strand, 32408587 - 32408659
Alignment:
Q  88 gcttatgatatgtcctaaatatggtttcagcttatttccataagctctccaggatagcttataaaaacagttt 160  Q
    |||||||| ||||||  ||  ||||||| ||||||||||||||||||| ||||||||||||| |||| |||||    
T  32408587 gcttatgacatgtccgtaagttggtttctgcttatttccataagctcttcaggatagcttatgaaaatagttt 32408659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 73 - 156
Target Start/End: Original strand, 2880527 - 2880610
Alignment:
Q  73 gagcttatggaaacggcttatgatatgtcctaaatatggtttcagcttatttccataagctctccaggatagcttataaaaaca 156  Q
    |||||||||||||| ||| ||||||||| |  ||  || ||||||||||||||||||| |||| | | ||||||||||||||||    
T  2880527 gagcttatggaaacagctaatgatatgttcataaggtgttttcagcttatttccataaactcttctgaatagcttataaaaaca 2880610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 112 - 214
Target Start/End: Original strand, 3951835 - 3951937
Alignment:
Q  112 tttcagcttatttccataagctctccaggatagcttataaaaacagtttgactttgttttatctatttgttatataaatggctta-tcataagtacttat 210  Q
    ||||| |||||||| ||||||| ||||| ||||||||| |||  ||| ||| ||  |||||||| |||||||||||||| ||||| ||||||| ||||||    
T  3951835 tttcaacttatttctataagctgtccagaatagcttatgaaagtagtctgatttcattttatct-tttgttatataaatagcttattcataagcacttat 3951933  T
Q  211 atca 214  Q
    ||||    
T  3951934 atca 3951937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 63 - 190
Target Start/End: Original strand, 10280569 - 10280694
Alignment:
Q  63 ctgtttgaaagagcttatggaaacggcttatgatatgtcctaaatatggtttcagcttatttccataagctctccaggatagcttataaaaacagtttga 162  Q
    |||||||||||| ||||||||||| |||||||| ||||||  ||  || | |||||||||||||||||| ||||   |||| ||||   |||||||||||    
T  10280569 ctgtttgaaagaacttatggaaacagcttatga-atgtccataagttgttatcagcttatttccataagttctctgagataacttaagcaaacagtttga 10280667  T
Q  163 ctttgttttatctatttgttatataaat 190  Q
    |||| || ||||| ||||||||| ||||    
T  10280668 ctttattctatct-tttgttatagaaat 10280694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 66 - 157
Target Start/End: Original strand, 41957424 - 41957515
Alignment:
Q  66 tttgaaagagcttatggaaacggcttatgatatgtcctaaatatggtttcagcttatttccataagctctccaggatagcttataaaaacag 157  Q
    |||| ||||||||| |||||| |||||||| ||||||  ||  || ||||| ||||||| |||||| |||| |||||||||||| |||||||    
T  41957424 tttggaagagcttacggaaacagcttatgacatgtccataagttgttttcatcttattttcataagttctcaaggatagcttatgaaaacag 41957515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 63 - 157
Target Start/End: Complemental strand, 14295606 - 14295512
Alignment:
Q  63 ctgtttgaaagagcttatggaaacggcttatgatatgtcctaaatatggtttcagcttatttccataagctctccaggatagcttataaaaacag 157  Q
    |||| ||| |||||||||| |||| ||||||||||||||   ||  || |||||||||| ||| | ||||||||||||||||||||  |||||||    
T  14295606 ctgtctgagagagcttatgaaaacagcttatgatatgtcgataagctgttttcagcttacttctaaaagctctccaggatagcttacgaaaacag 14295512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 168 - 249
Target Start/End: Complemental strand, 26516271 - 26516190
Alignment:
Q  168 ttttatctatttgttatataaatggcttat-cataagtacttatatcataagcgcttaagccataaacgcttaattaagttgt 249  Q
    |||||||| |||||| || |||| |||||| |||||| |||||||| ||||||||||| || |||| ||||||||||||||||    
T  26516271 ttttatct-tttgttttagaaatagcttatacataagcacttatatgataagcgcttatgctataagcgcttaattaagttgt 26516190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 115 - 157
Target Start/End: Original strand, 29844969 - 29845011
Alignment:
Q  115 cagcttatttccataagctctccaggatagcttataaaaacag 157  Q
    |||||||||||||||||||||||||| ||||| ||||||||||    
T  29844969 cagcttatttccataagctctccagggtagctaataaaaacag 29845011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 112 - 162
Target Start/End: Original strand, 37611234 - 37611284
Alignment:
Q  112 tttcagcttatttccataagctctccaggatagcttataaaaacagtttga 162  Q
    |||||| |||||||||||||||||||| |||||||||| |||||| |||||    
T  37611234 tttcaggttatttccataagctctccaagatagcttatgaaaacaatttga 37611284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 112 - 162
Target Start/End: Original strand, 37787964 - 37788014
Alignment:
Q  112 tttcagcttatttccataagctctccaggatagcttataaaaacagtttga 162  Q
    |||||| |||||||||||||||||||| |||||||||| |||||| |||||    
T  37787964 tttcaggttatttccataagctctccaagatagcttatgaaaacaatttga 37788014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 112 - 157
Target Start/End: Original strand, 10798431 - 10798476
Alignment:
Q  112 tttcagcttatttccataagctctccaggatagcttataaaaacag 157  Q
    |||||| |||||||||| |||||| |||||||||||||||||||||    
T  10798431 tttcagattatttccatcagctcttcaggatagcttataaaaacag 10798476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 112 - 157
Target Start/End: Complemental strand, 36638798 - 36638753
Alignment:
Q  112 tttcagcttatttccataagctctccaggatagcttataaaaacag 157  Q
    ||||||||||||||||||||||||| |||||| ||||| |||||||    
T  36638798 tttcagcttatttccataagctctctaggataacttatgaaaacag 36638753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 112 - 184
Target Start/End: Original strand, 13605392 - 13605462
Alignment:
Q  112 tttcagcttatttccataagctctccaggatagcttataaaaacagtttgactttgttttatctatttgttat 184  Q
    |||||| |||||| |||||||| |||||||||||||||| ||| || |||||||| |||||||| ||||||||    
T  13605392 tttcagtttattttcataagctttccaggatagcttatataaa-agattgactttattttatct-tttgttat 13605462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 112 - 160
Target Start/End: Complemental strand, 16328916 - 16328869
Alignment:
Q  112 tttcagcttatttccataagctctccaggatagcttataaaaacagttt 160  Q
    ||||||||||||||||||||||||||||| |||||||  ||||||||||    
T  16328916 tttcagcttatttccataagctctccagg-tagcttacgaaaacagttt 16328869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 112 - 156
Target Start/End: Complemental strand, 17368727 - 17368683
Alignment:
Q  112 tttcagcttatttccataagctctccaggatagcttataaaaaca 156  Q
    ||||||||||||||||||| ||||||| |||||||||| ||||||    
T  17368727 tttcagcttatttccataacctctccaagatagcttatgaaaaca 17368683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 112 - 156
Target Start/End: Original strand, 18543216 - 18543259
Alignment:
Q  112 tttcagcttatttccataagctctccaggatagcttataaaaaca 156  Q
    |||||||||||||| ||||||||||||||||||||||| ||||||    
T  18543216 tttcagcttatttc-ataagctctccaggatagcttatgaaaaca 18543259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 112 - 148
Target Start/End: Original strand, 31030149 - 31030185
Alignment:
Q  112 tttcagcttatttccataagctctccaggatagctta 148  Q
    |||||||||||||||||||||||||||||| ||||||    
T  31030149 tttcagcttatttccataagctctccaggacagctta 31030185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 112 - 148
Target Start/End: Complemental strand, 34975415 - 34975379
Alignment:
Q  112 tttcagcttatttccataagctctccaggatagctta 148  Q
    ||||||||||||||||| |||||||||||||||||||    
T  34975415 tttcagcttatttccattagctctccaggatagctta 34975379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 112 - 160
Target Start/End: Original strand, 35553207 - 35553255
Alignment:
Q  112 tttcagcttatttccataagctctccaggatagcttataaaaacagttt 160  Q
    |||||||||||||||||||||||||||| ||||| ||| |||| |||||    
T  35553207 tttcagcttatttccataagctctccagaatagcgtatgaaaatagttt 35553255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 112 - 156
Target Start/End: Original strand, 37588379 - 37588423
Alignment:
Q  112 tttcagcttatttccataagctctccaggatagcttataaaaaca 156  Q
    |||||||||||||||||||||||||||| ||| ||||| ||||||    
T  37588379 tttcagcttatttccataagctctccagaataacttatgaaaaca 37588423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 112 - 184
Target Start/End: Complemental strand, 985664 - 985591
Alignment:
Q  112 tttcagcttatttccataagctctccaggatagctta--taaaaacagtttgactttgttttatctatttgttat 184  Q
    ||||||||||||||||||  |||| || |||||||||  | |||||||||||||||| |||||||| ||||||||    
T  985664 tttcagcttatttccatagtctcttcatgatagcttatgtgaaaacagtttgactttattttatct-tttgttat 985591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 109 - 160
Target Start/End: Complemental strand, 4619761 - 4619710
Alignment:
Q  109 tggtttcagcttatttccataagctctccaggatagcttataaaaacagttt 160  Q
    |||||||| |||||||||||||| |||||| |||||||||| || |||||||    
T  4619761 tggtttcaccttatttccataagttctccatgatagcttatgaagacagttt 4619710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 63 - 146
Target Start/End: Original strand, 28586736 - 28586819
Alignment:
Q  63 ctgtttgaaagagcttatggaaacggcttatgatatgtcctaaatatggtttcagcttatttccataagctctccaggatagct 146  Q
    |||||||  ||||||||||||||  |||||||| || |||  ||  || |||||||||||||| |||||||||| |||||||||    
T  28586736 ctgtttgggagagcttatggaaatagcttatgacatatccgtaagctgttttcagcttatttcgataagctctctaggatagct 28586819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 118 - 156
Target Start/End: Original strand, 5946704 - 5946742
Alignment:
Q  118 cttatttccataagctctccaggatagcttataaaaaca 156  Q
    |||||||||||||||| ||| ||||||||||||||||||    
T  5946704 cttatttccataagctttcctggatagcttataaaaaca 5946742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 119 - 197
Target Start/End: Original strand, 7096175 - 7096252
Alignment:
Q  119 ttatttccataagctctccaggatagcttataaaaacagtttgactttgttttatctatttgttatataaatggcttat 197  Q
    |||||| ||||||||||| |  ||||||||| ||||  |||||||||| |||||||| ||||||||| |||| ||||||    
T  7096175 ttatttacataagctctctataatagcttatgaaaatggtttgactttattttatct-tttgttatagaaatagcttat 7096252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 114 - 160
Target Start/End: Original strand, 7319029 - 7319075
Alignment:
Q  114 tcagcttatttccataagctctccaggatagcttataaaaacagttt 160  Q
    ||||||||||| |||||| |||||| |||||||||| ||||||||||    
T  7319029 tcagcttattttcataagttctccaagatagcttatgaaaacagttt 7319075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 71 - 160
Target Start/End: Original strand, 8651330 - 8651419
Alignment:
Q  71 aagagcttatggaaacggcttatgat-atgtcctaaatatggtttcagcttatttccataagctctccaggatagcttataaaaacagttt 160  Q
    |||||||||||||||| |||||| |  ||||||  ||  || ||||||| ||||||||||||||| |||| ||||||||| ||||||||||    
T  8651330 aagagcttatggaaacagcttataaacatgtccataagttgttttcagcatatttccataagctc-ccagaatagcttatgaaaacagttt 8651419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 112 - 158
Target Start/End: Original strand, 26005016 - 26005062
Alignment:
Q  112 tttcagcttatttccataagctctccaggatagcttataaaaacagt 158  Q
    ||||| ||||||||||||||||||||| | |||||||| ||||||||    
T  26005016 tttcaccttatttccataagctctccaagctagcttatgaaaacagt 26005062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 119 - 149
Target Start/End: Complemental strand, 30217126 - 30217096
Alignment:
Q  119 ttatttccataagctctccaggatagcttat 149  Q
    |||||||||||||||||||||||||||||||    
T  30217126 ttatttccataagctctccaggatagcttat 30217096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 112 - 149
Target Start/End: Original strand, 3970699 - 3970736
Alignment:
Q  112 tttcagcttatttccataagctctccaggatagcttat 149  Q
    ||||||||||||| |||||||||||||| |||||||||    
T  3970699 tttcagcttattttcataagctctccagtatagcttat 3970736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 112 - 157
Target Start/End: Original strand, 4014443 - 4014488
Alignment:
Q  112 tttcagcttatttccataagctctccaggatagcttataaaaacag 157  Q
    ||||||||||||| |||||| |||||| |||||||||| |||||||    
T  4014443 tttcagcttattttcataagttctccaagatagcttatgaaaacag 4014488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 112 - 157
Target Start/End: Original strand, 17258902 - 17258947
Alignment:
Q  112 tttcagcttatttccataagctctccaggatagcttataaaaacag 157  Q
    ||||||||||||| |||||||||| |||||||| |||| |||||||    
T  17258902 tttcagcttattttcataagctcttcaggatagtttatgaaaacag 17258947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 112 - 157
Target Start/End: Complemental strand, 18875412 - 18875367
Alignment:
Q  112 tttcagcttatttccataagctctccaggatagcttataaaaacag 157  Q
    ||||| ||| |||||||||||||||||||||| ||||| |||||||    
T  18875412 tttcaacttgtttccataagctctccaggatatcttattaaaacag 18875367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 112 - 149
Target Start/End: Complemental strand, 19460618 - 19460581
Alignment:
Q  112 tttcagcttatttccataagctctccaggatagcttat 149  Q
    |||||||| |||||||||||||||||| ||||||||||    
T  19460618 tttcagctcatttccataagctctccatgatagcttat 19460581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 123 - 156
Target Start/End: Complemental strand, 28982050 - 28982017
Alignment:
Q  123 ttccataagctctccaggatagcttataaaaaca 156  Q
    |||||||||||||||||| |||||||||||||||    
T  28982050 ttccataagctctccagggtagcttataaaaaca 28982017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 116 - 157
Target Start/End: Complemental strand, 29201580 - 29201539
Alignment:
Q  116 agcttatttccataagctctccaggatagcttataaaaacag 157  Q
    |||| |||||||||||||||||||||||| |||| |||||||    
T  29201580 agctaatttccataagctctccaggataggttatgaaaacag 29201539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 124 - 157
Target Start/End: Original strand, 38047886 - 38047919
Alignment:
Q  124 tccataagctctccaggatagcttataaaaacag 157  Q
    |||||||||||||||||||||||||| |||||||    
T  38047886 tccataagctctccaggatagcttatgaaaacag 38047919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 112 - 149
Target Start/End: Original strand, 38104876 - 38104913
Alignment:
Q  112 tttcagcttatttccataagctctccaggatagcttat 149  Q
    ||||||||||||||||||||||||| | ||||||||||    
T  38104876 tttcagcttatttccataagctctctaagatagcttat 38104913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 111 - 156
Target Start/End: Complemental strand, 43300930 - 43300885
Alignment:
Q  111 gtttcagcttatttccataagctctccaggatagcttataaaaaca 156  Q
    |||||||||||||| |||||| |||||| ||||||||| |||||||    
T  43300930 gtttcagcttattttcataagttctccaagatagcttacaaaaaca 43300885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 112 - 156
Target Start/End: Original strand, 15074768 - 15074812
Alignment:
Q  112 tttcagcttatttccataagctctccaggatagcttataaaaaca 156  Q
    |||||||||||||||||||||| ||||| ||| ||||| ||||||    
T  15074768 tttcagcttatttccataagctttccagtataacttatgaaaaca 15074812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 112 - 160
Target Start/End: Complemental strand, 18906393 - 18906345
Alignment:
Q  112 tttcagcttatttccataagctctccaggatagcttataaaaacagttt 160  Q
    |||||||||||||| ||||||| | || |||||||||| ||||||||||    
T  18906393 tttcagcttatttcgataagcttttcaagatagcttatgaaaacagttt 18906345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 112 - 148
Target Start/End: Original strand, 26390809 - 26390845
Alignment:
Q  112 tttcagcttatttccataagctctccaggatagctta 148  Q
    ||||| |||||||||||||||||||||||||| ||||    
T  26390809 tttcaccttatttccataagctctccaggataactta 26390845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 112 - 156
Target Start/End: Original strand, 27565369 - 27565413
Alignment:
Q  112 tttcagcttatttccataagctctccaggatagcttataaaaaca 156  Q
    ||||||||||||| |||||||||||||| ||| ||||| ||||||    
T  27565369 tttcagcttattttcataagctctccagaatatcttattaaaaca 27565413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 112 - 156
Target Start/End: Original strand, 33533558 - 33533602
Alignment:
Q  112 tttcagcttatttccataagctctccaggatagcttataaaaaca 156  Q
    ||||| ||||||||||||||||||||| |||||||| | ||||||    
T  33533558 tttcaacttatttccataagctctccaagatagcttgtgaaaaca 33533602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 112 - 156
Target Start/End: Original strand, 37526218 - 37526262
Alignment:
Q  112 tttcagcttatttccataagctctccaggatagcttataaaaaca 156  Q
    |||||||||||||||||||||||||||| | | ||||| ||||||    
T  37526218 tttcagcttatttccataagctctccagaacaacttatgaaaaca 37526262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 112 - 156
Target Start/End: Complemental strand, 40731520 - 40731476
Alignment:
Q  112 tttcagcttatttccataagctctccaggatagcttataaaaaca 156  Q
    ||||||| ||||| ||||||||||| |||||||||||| ||||||    
T  40731520 tttcagcatattttcataagctctcaaggatagcttatgaaaaca 40731476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 66; Significance: 7e-29; HSPs: 40)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 112 - 224
Target Start/End: Original strand, 44284099 - 44284211
Alignment:
Q  112 tttcagcttatttccataagctctccaggatagcttataaaaacagtttgactttgttttatctatttgttatataaatggcttat-cataagtacttat 210  Q
    |||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||| | ||||||||| |||| |||||| ||| |||||||||    
T  44284099 tttcagcttatttctataagctctccaggatagcttatgaaaacagtttgactttgttttat-tttttgttatagaaatagcttatacattagtacttat 44284197  T
Q  211 atcataagcgctta 224  Q
    || |||| ||||||    
T  44284198 atgataatcgctta 44284211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 112 - 225
Target Start/End: Complemental strand, 48528607 - 48528494
Alignment:
Q  112 tttcagcttatttccataagctctccaggatagcttataaaaacagtttgactttgttttatctatttgttatataaatggcttat-cataagtacttat 210  Q
    |||||||||||||| |||| |||||||| ||||||||| ||||||| |||  ||| |||||| |  |||||||| |||| |||||| |||||||||||||    
T  48528607 tttcagcttatttctataaactctccagaatagcttatgaaaacagcttggttttattttat-ttcttgttatagaaatagcttatacataagtacttat 48528509  T
Q  211 atcataagcgcttaa 225  Q
    || |||||| |||||    
T  48528508 atgataagctcttaa 48528494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 63 - 160
Target Start/End: Complemental strand, 37273234 - 37273137
Alignment:
Q  63 ctgtttgaaagagcttatggaaacggcttatgatatgtcctaaatatggtttcagcttatttccataagctctccaggatagcttataaaaacagttt 160  Q
    |||||||  |||||||||||||||  ||||||| ||||||  ||  || ||||| |||||||||||||| |||||| |||||||||| ||||||||||    
T  37273234 ctgtttgggagagcttatggaaacaacttatgacatgtccataagttgttttcaacttatttccataagttctccaagatagcttatgaaaacagttt 37273137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 74 - 165
Target Start/End: Complemental strand, 37825212 - 37825120
Alignment:
Q  74 agcttatggaaacg-gcttatgatatgtcctaaatatggtttcagcttatttccataagctctccaggatagcttataaaaacagtttgactt 165  Q
    |||||||||||||| |||||||| ||||||  ||  || |||||| ||||||||||||||||||||||| |||| ||||||||| ||| ||||    
T  37825212 agcttatggaaacgagcttatgacatgtccataagttgttttcaggttatttccataagctctccaggaaagctaataaaaacaatttaactt 37825120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 112 - 212
Target Start/End: Original strand, 49586955 - 49587056
Alignment:
Q  112 tttcagcttatttccataagctctccaggatagcttata--aaaacagtttgactttgttttatctatttgttatataaatggcttatcataagtactta 209  Q
    |||||| |||||||  ||| ||||||| |||||||||||  |||||||||||||||| |||||||| ||||||||| |||| ||||||  |||| |||||    
T  49586955 tttcagtttatttctttaatctctccaagatagcttatatgaaaacagtttgactttattttatct-tttgttatagaaatagcttatagtaagcactta 49587053  T
Q  210 tat 212  Q
    |||    
T  49587054 tat 49587056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 112 - 157
Target Start/End: Original strand, 24887302 - 24887347
Alignment:
Q  112 tttcagcttatttccataagctctccaggatagcttataaaaacag 157  Q
    |||||||||||| ||||||||||||||||||||||||| |||||||    
T  24887302 tttcagcttattcccataagctctccaggatagcttatgaaaacag 24887347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 112 - 224
Target Start/End: Complemental strand, 36200147 - 36200035
Alignment:
Q  112 tttcagcttatttccataagctctccaggatagcttataaaaacagtttgactttgttttatctatttgttatataaatggcttat-cataagtacttat 210  Q
    ||||||||||||||||| |||||| ||||||||||||||| || |   ||| ||| ||||||| |||||||| |||||| ||| || |||||| ||||||    
T  36200147 tttcagcttatttccatgagctctacaggatagcttataagaaaacaatgagtttattttatc-atttgttacataaatagctgatacataagaacttat 36200049  T
Q  211 atcataagcgctta 224  Q
    || |||||| ||||    
T  36200048 atgataagctctta 36200035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 118 - 157
Target Start/End: Original strand, 24158528 - 24158567
Alignment:
Q  118 cttatttccataagctctccaggatagcttataaaaacag 157  Q
    |||||||||||||||||||||||||||||||| |||||||    
T  24158528 cttatttccataagctctccaggatagcttatgaaaacag 24158567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 116 - 185
Target Start/End: Complemental strand, 22667451 - 22667382
Alignment:
Q  116 agcttatttccataagctctccaggatagcttat-aaaaacagtttgactttgttttatctatttgttata 185  Q
    ||||||||||| ||||||||||| |||||||||| |||||||||||| |||  |||||||| |||||||||    
T  22667451 agcttatttccgtaagctctccaagatagcttatgaaaaacagtttggcttcattttatct-tttgttata 22667382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 116 - 185
Target Start/End: Complemental strand, 22724090 - 22724021
Alignment:
Q  116 agcttatttccataagctctccaggatagcttat-aaaaacagtttgactttgttttatctatttgttata 185  Q
    ||||||||||| ||||||||||| |||||||||| |||||||||||| |||  |||||||| |||||||||    
T  22724090 agcttatttccgtaagctctccaagatagcttatgaaaaacagtttggcttcattttatct-tttgttata 22724021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 112 - 158
Target Start/End: Original strand, 40608400 - 40608446
Alignment:
Q  112 tttcagcttatttccataagctctccaggatagcttataaaaacagt 158  Q
    |||||||||| ||||||||| |||||||||||| |||||||||||||    
T  40608400 tttcagcttacttccataagttctccaggatagtttataaaaacagt 40608446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 112 - 156
Target Start/End: Original strand, 14548740 - 14548784
Alignment:
Q  112 tttcagcttatttccataagctctccaggatagcttataaaaaca 156  Q
    |||||||||||||||||||||||||||| ||| ||||| ||||||    
T  14548740 tttcagcttatttccataagctctccagaataacttatgaaaaca 14548784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 63 - 159
Target Start/End: Complemental strand, 21574590 - 21574494
Alignment:
Q  63 ctgtttgaaagagcttatggaaacggcttatgatatgtcctaaatatggtttcagcttatttccataagctctccaggatagcttataaaaacagtt 159  Q
    |||||||  |||||||||| ||||  ||||||| |||| |  ||  || ||| ||||||||||||||||||||||| | ||||||||||||| ||||    
T  21574590 ctgtttgggagagcttatgaaaacaacttatgacatgttcataagctgcttttagcttatttccataagctctccatgttagcttataaaaaaagtt 21574494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 112 - 160
Target Start/End: Original strand, 33725893 - 33725941
Alignment:
Q  112 tttcagcttatttccataagctctccaggatagcttataaaaacagttt 160  Q
    ||||| |||||||| ||||||| |||||||||| |||||||||||||||    
T  33725893 tttcatcttatttctataagctttccaggatagtttataaaaacagttt 33725941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 112 - 160
Target Start/End: Complemental strand, 38462332 - 38462284
Alignment:
Q  112 tttcagcttatttccataagctctccaggatagcttataaaaacagttt 160  Q
    |||||||||||||||||||||| ||  ||||||||||| ||||||||||    
T  38462332 tttcagcttatttccataagctatcttggatagcttatgaaaacagttt 38462284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 72 - 156
Target Start/End: Original strand, 39311658 - 39311742
Alignment:
Q  72 agagcttatggaaacggcttatgatatgtcctaaatatggtttcagcttatttccataagctctccaggatagcttataaaaaca 156  Q
    ||||||||||||||| | ||||||||| |||  ||  |  ||||| ||||||||||||| |||||||| ||||||||| ||||||    
T  39311658 agagcttatggaaacagtttatgatatttccacaaatttttttcatcttatttccataaactctccagtatagcttatgaaaaca 39311742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 64 - 136
Target Start/End: Complemental strand, 43115155 - 43115083
Alignment:
Q  64 tgtttgaaagagcttatggaaacggcttatgatatgtcctaaatatggtttcagcttatttccataagctctc 136  Q
    |||||| ||||| ||||||||||  ||||||| ||||||  ||  || |||||||||||||||||||||||||    
T  43115155 tgtttggaagagtttatggaaacaacttatgacatgtccataacttgttttcagcttatttccataagctctc 43115083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 128 - 175
Target Start/End: Original strand, 659880 - 659927
Alignment:
Q  128 taagctctccaggatagcttataaaaacagtttgactttgttttatct 175  Q
    ||||||||| |||||| |||||||||| ||||||||||| ||||||||    
T  659880 taagctctctaggatatcttataaaaatagtttgactttattttatct 659927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 66 - 157
Target Start/End: Original strand, 1217773 - 1217864
Alignment:
Q  66 tttgaaagagcttatggaaacggcttatgatatgtcctaaatatggtttcagcttatttccataagctctccaggatagcttataaaaacag 157  Q
    |||| ||||||||| |||||| |||||||| ||||||  ||  || ||||| |||| || |||||| |||| |||||||||||| |||||||    
T  1217773 tttggaagagcttacggaaacagcttatgacatgtccataagttgttttcatcttactttcataagttctcaaggatagcttatgaaaacag 1217864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 112 - 218
Target Start/End: Complemental strand, 39971348 - 39971242
Alignment:
Q  112 tttcagcttatttccataagctctccaggatagcttataaaaacagtttgactttgttttatctatttgttatataaatggcttat-cataagtacttat 210  Q
    ||||||||||||||  ||| ||||  || ||||||||| |||||| |||| |||| |||||||| |||||||||||| |  ||||| |||||| ||||||    
T  39971348 tttcagcttatttcattaaactctagagtatagcttattaaaacaatttggctttattttatct-tttgttatataagtaacttatacataagcacttat 39971250  T
Q  211 atcataag 218  Q
    || |||||    
T  39971249 atgataag 39971242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 114 - 160
Target Start/End: Complemental strand, 2719517 - 2719471
Alignment:
Q  114 tcagcttatttccataagctctccaggatagcttataaaaacagttt 160  Q
    ||||||||||| |||||| |||||| |||||||||| ||||||||||    
T  2719517 tcagcttattttcataagttctccaagatagcttatgaaaacagttt 2719471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 63 - 133
Target Start/End: Original strand, 11039309 - 11039379
Alignment:
Q  63 ctgtttgaaagagcttatggaaacggcttatgatatgtcctaaatatggtttcagcttatttccataagct 133  Q
    ||||||||||||||||||||||||   |||||| ||||||  ||  || ||||||||||| ||||||||||    
T  11039309 ctgtttgaaagagcttatggaaacatattatgacatgtccataagttgttttcagcttatctccataagct 11039379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 151 - 197
Target Start/End: Complemental strand, 22232816 - 22232771
Alignment:
Q  151 aaaacagtttgactttgttttatctatttgttatataaatggcttat 197  Q
    |||||||||||||||| ||||||| ||||||||||||||| ||||||    
T  22232816 aaaacagtttgactttattttatc-atttgttatataaatagcttat 22232771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 112 - 175
Target Start/End: Original strand, 52323913 - 52323978
Alignment:
Q  112 tttcagcttatttcca--taagctctccaggatagcttataaaaacagtttgactttgttttatct 175  Q
    ||||| ||||||||||  ||||||||||| |||||||||| |||||| |||||| || ||||||||    
T  52323913 tttcaacttatttccacataagctctccaagatagcttatcaaaacaatttgaccttattttatct 52323978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 112 - 173
Target Start/End: Original strand, 12985364 - 12985425
Alignment:
Q  112 tttcagcttatttccataagctctccaggatagcttataaaaacagtttgactttgttttat 173  Q
    |||| ||||||||||||||| |||  |||||||||||| ||||||||||  |||| ||||||    
T  12985364 tttcggcttatttccataagttcttgaggatagcttatgaaaacagtttatctttattttat 12985425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 112 - 157
Target Start/End: Original strand, 13709842 - 13709887
Alignment:
Q  112 tttcagcttatttccataagctctccaggatagcttataaaaacag 157  Q
    |||||| ||||||| |||| |||||||||||||||||| |||||||    
T  13709842 tttcagtttatttcaataaactctccaggatagcttatgaaaacag 13709887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 112 - 157
Target Start/End: Original strand, 20502087 - 20502132
Alignment:
Q  112 tttcagcttatttccataagctctccaggatagcttataaaaacag 157  Q
    ||||||||||||  |||||||||| ||||||||||||| |||||||    
T  20502087 tttcagcttattctcataagctcttcaggatagcttatgaaaacag 20502132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 112 - 157
Target Start/End: Complemental strand, 20669223 - 20669178
Alignment:
Q  112 tttcagcttatttccataagctctccaggatagcttataaaaacag 157  Q
    |||| |||||||| ||||||||||||| |||||||||| |||||||    
T  20669223 tttccgcttatttacataagctctccaagatagcttatgaaaacag 20669178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 63 - 156
Target Start/End: Complemental strand, 24624310 - 24624217
Alignment:
Q  63 ctgtttgaaagagcttatggaaacggcttatgatatgtcctaaatatggtttcagcttatttccataagctctccaggatagcttataaaaaca 156  Q
    ||||||| ||||||||||| |||| |||||||| ||||||  ||  || ||||||||||||  |||||| | || |||||||| ||| ||||||    
T  24624310 ctgtttggaagagcttatgaaaacagcttatgacatgtccataaactgttttcagcttattaacataagatttctaggatagcctatgaaaaca 24624217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 120 - 212
Target Start/End: Complemental strand, 34958348 - 34958257
Alignment:
Q  120 tatttccataagctctccaggatagcttataaaaacagtttgactttgttttatctatttgttatataaatggctta-tcataagtacttatat 212  Q
    ||||| ||||||||||||| ||||| |||| ||||||| |||||||| |||||||| | ||||||| |||| | ||| |||||||| |||||||    
T  34958348 tattttcataagctctccatgataggttat-aaaacagcttgactttattttatct-tgtgttatagaaatagtttattcataagtgcttatat 34958257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 112 - 156
Target Start/End: Complemental strand, 1816634 - 1816590
Alignment:
Q  112 tttcagcttatttccataagctctccaggatagcttataaaaaca 156  Q
    |||||||||||||  ||||||||||||| ||||||||| ||||||    
T  1816634 tttcagcttattttgataagctctccagtatagcttatgaaaaca 1816590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 147 - 210
Target Start/End: Complemental strand, 5431020 - 5430957
Alignment:
Q  147 tataaaaacagtttgactttgttttatctatttgttatataaatggcttat-cataagtacttat 210  Q
    |||||||||||||||||||| ||||| || | ||||||| ||||||||||| |||||| ||||||    
T  5431020 tataaaaacagtttgactttctttta-ctttctgttatagaaatggcttatacataagcacttat 5430957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 112 - 156
Target Start/End: Complemental strand, 21367718 - 21367674
Alignment:
Q  112 tttcagcttatttccataagctctccaggatagcttataaaaaca 156  Q
    ||||||||||||| |||||| |||||| |||||||||| ||||||    
T  21367718 tttcagcttattttcataagttctccaagatagcttatgaaaaca 21367674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 112 - 160
Target Start/End: Complemental strand, 23785306 - 23785258
Alignment:
Q  112 tttcagcttatttccataagctctccaggatagcttataaaaacagttt 160  Q
    ||||||||| ||||||||||||||||| || ||||| | ||||||||||    
T  23785306 tttcagcttgtttccataagctctccatgagagcttgtgaaaacagttt 23785258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 116 - 156
Target Start/End: Complemental strand, 24785252 - 24785212
Alignment:
Q  116 agcttatttccataagctctccaggatagcttataaaaaca 156  Q
    ||||||||| ||||||||||| |||||||||||| ||||||    
T  24785252 agcttatttacataagctctcgaggatagcttatgaaaaca 24785212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 112 - 160
Target Start/End: Original strand, 34254827 - 34254875
Alignment:
Q  112 tttcagcttatttccataagctctccaggatagcttataaaaacagttt 160  Q
    ||||||||||||| |||||| ||||||| ||||||||| |||| |||||    
T  34254827 tttcagcttatttacataagttctccagaatagcttatgaaaatagttt 34254875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 62 - 154
Target Start/End: Complemental strand, 34383043 - 34382951
Alignment:
Q  62 tctgtttgaaagagcttatggaaacggcttatgatatgtcctaaatatggtttcagcttatttccataagctctccaggatagcttataaaaa 154  Q
    ||||||||| | ||||||||||||| | ||||||||||||   ||  || ||||| ||||||| | |||||| | ||||||||||||| ||||    
T  34383043 tctgtttgagatagcttatggaaacagattatgatatgtctataagttgttttcatcttattttcttaagcttttcaggatagcttatgaaaa 34382951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 72 - 156
Target Start/End: Original strand, 36646361 - 36646445
Alignment:
Q  72 agagcttatggaaacggcttatgatatgtcctaaatatggtttcagcttatttccataagctctccaggatagcttataaaaaca 156  Q
    |||||||||||||||  ||||||  ||||||  ||  || ||||| |||||||| |||| ||||| |||||||||||| ||||||    
T  36646361 agagcttatggaaaccacttatggcatgtccataagctgttttcatcttatttctataaactctctaggatagcttatgaaaaca 36646445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 116 - 156
Target Start/End: Original strand, 49465688 - 49465728
Alignment:
Q  116 agcttatttccataagctctccaggatagcttataaaaaca 156  Q
    |||||||||||||||| ||||||| ||||||||| ||||||    
T  49465688 agcttatttccataagttctccagtatagcttatgaaaaca 49465728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 116 - 156
Target Start/End: Original strand, 51510216 - 51510256
Alignment:
Q  116 agcttatttccataagctctccaggatagcttataaaaaca 156  Q
    ||||||||||||||||||||||| |||| ||||| ||||||    
T  51510216 agcttatttccataagctctccacgataacttatgaaaaca 51510256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 65; Significance: 3e-28; HSPs: 51)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 112 - 219
Target Start/End: Complemental strand, 20672801 - 20672694
Alignment:
Q  112 tttcagcttatttccataagctctccaggatagcttataaaaacagtttgactttgttttatctatttgttatataaatggctta-tcataagtacttat 210  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||| ||| ||  |||||| ||||||    
T  20672801 tttcagcttattttcataagctctccaggatagcttataaaaacagtttgactttattttatct-tttgttatataaagggcatacacataagcacttat 20672703  T
Q  211 atcataagc 219  Q
    || ||||||    
T  20672702 atgataagc 20672694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 64 - 247
Target Start/End: Original strand, 39392653 - 39392837
Alignment:
Q  64 tgtttgaaagagcttatggaaacggcttatgatatgtcctaaatatggtttcagcttatttccataagctctccaggatagcttat-aaaaacagtttga 162  Q
    |||||||||||||||||| | |  |||| |||||||||   ||| || ||||||||||||| ||||||||  ||| |||||| | | ||| |||||||||    
T  39392653 tgtttgaaagagcttatgaataaagcttgtgatatgtcaataatctgttttcagcttattttcataagcttgccaagatagcctgtgaaacacagtttga 39392752  T
Q  163 ctttgttttatctatttgttatataaatggcttat-cataagtacttatatcataagcgcttaagccataaacgcttaattaagtt 247  Q
    |||| |||||||| ||||||||| |||| | |||| ||||   |||||||| |||||| |||| || ||||| |||||||||||||    
T  39392753 ctttattttatct-tttgttatagaaatagtttatacatagccacttatatgataagcacttatgctataaatgcttaattaagtt 39392837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 115 - 175
Target Start/End: Complemental strand, 33553288 - 33553228
Alignment:
Q  115 cagcttatttccataagctctccaggatagcttataaaaacagtttgactttgttttatct 175  Q
    ||||||||||||||||||||| || |||||||||| |||||| ||||||||| ||||||||    
T  33553288 cagcttatttccataagctcttcaagatagcttatgaaaacaatttgactttattttatct 33553228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 112 - 156
Target Start/End: Original strand, 39881771 - 39881815
Alignment:
Q  112 tttcagcttatttccataagctctccaggatagcttataaaaaca 156  Q
    ||||||||||||||||||||||||||| |||||||||||||||||    
T  39881771 tttcagcttatttccataagctctccatgatagcttataaaaaca 39881815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 66 - 156
Target Start/End: Complemental strand, 30259211 - 30259121
Alignment:
Q  66 tttgaaagagcttatggaaacggcttatgatatgtcctaaatatggtttcagcttatttccataagctctccaggatagcttataaaaaca 156  Q
    ||||| ||||||||||||||| ||||||||||||||   ||  || |||||| ||||||||||||| |||||| ||||  |||||||||||    
T  30259211 tttgagagagcttatggaaacagcttatgatatgtctataagttgttttcagtttatttccataagttctccaagataatttataaaaaca 30259121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 72 - 165
Target Start/End: Original strand, 9540975 - 9541068
Alignment:
Q  72 agagcttatggaaacggcttatgatatgtcctaaatatggtttcagcttatttccataagctctccaggatagcttataaaaacagtttgactt 165  Q
    |||||||||||||||  ||||||| ||||||  ||| ||  |||||||||||| || |||||||| |||||||||||| |||| || |||||||    
T  9540975 agagcttatggaaacatcttatgacatgtccataatttgtgttcagcttattttcaaaagctctctaggatagcttatgaaaataggttgactt 9541068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 112 - 224
Target Start/End: Original strand, 36643912 - 36644024
Alignment:
Q  112 tttcagcttatttccataagctctccaggatagcttataaaaacagtttgactttgttttatctatttgttatataaatggcttat-cataagtacttat 210  Q
    |||||||||||||||||| | |||||| |||||||||| |||| |||||||||||  | ||||| ||| ||||| |||| |||||| ||||  ||| |||    
T  36643912 tttcagcttatttccatacgttctccatgatagcttatgaaaatagtttgactttactgtatct-tttattatagaaatagcttatacatagatacgtat 36644010  T
Q  211 atcataagcgctta 224  Q
    || |||||||||||    
T  36644011 attataagcgctta 36644024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 112 - 156
Target Start/End: Complemental strand, 43504802 - 43504758
Alignment:
Q  112 tttcagcttatttccataagctctccaggatagcttataaaaaca 156  Q
    |||||||||||||||||||| |||||| |||||||||||||||||    
T  43504802 tttcagcttatttccataagttctccaagatagcttataaaaaca 43504758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 198 - 249
Target Start/End: Original strand, 2107453 - 2107504
Alignment:
Q  198 cataagtacttatatcataagcgcttaagccataaacgcttaattaagttgt 249  Q
    |||||| |||||||| |||||||| ||||| |||||||||||||||||||||    
T  2107453 cataagaacttatatgataagcgcataagctataaacgcttaattaagttgt 2107504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 63 - 157
Target Start/End: Original strand, 6509273 - 6509367
Alignment:
Q  63 ctgtttgaaagagcttatggaaacggcttatgatatgtcctaaata-tggtttcagcttatttccataagctctccaggatagcttataaaaacag 157  Q
    |||||||| ||||||||| ||||| |||||||| ||| |||| | | |  ||||| |||||||| ||||||||||||||||||||||| |||||||    
T  6509273 ctgtttgagagagcttatagaaacagcttatgacatg-cctataaactattttcaccttatttcaataagctctccaggatagcttatgaaaacag 6509367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 63 - 157
Target Start/End: Original strand, 11569427 - 11569521
Alignment:
Q  63 ctgtttgaaagagcttatggaaacggcttatgatatgtcctaaatatggtttcagcttatttccataagctctccaggatagcttataaaaacag 157  Q
    |||||| | ||||||||||||||| |||||||| |||| |  ||  || ||||||||||||| || || ||||||| |||||||||| |||||||    
T  11569427 ctgtttaagagagcttatggaaacagcttatgacatgtacataagttgttttcagcttattttcaaaatctctccatgatagcttatgaaaacag 11569521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 112 - 217
Target Start/End: Complemental strand, 14949917 - 14949812
Alignment:
Q  112 tttcagcttatttccataagctctccaggatagcttataaaaacagtttgactttgttttatctatttgttatataaatggcttat-cataagtacttat 210  Q
    |||||||||||||| |||| ||||  |||||||||||| |||| ||||||||| | |||||||| ||||||||| || | |||||| |||||| |||| |    
T  14949917 tttcagcttatttctataatctctttaggatagcttatgaaaagagtttgactctattttatct-tttgttatagaagtagcttatacataagaacttgt 14949819  T
Q  211 atcataa 217  Q
    || ||||    
T  14949818 atgataa 14949812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 199 - 253
Target Start/End: Original strand, 31875687 - 31875741
Alignment:
Q  199 ataagtacttatatcataagcgcttaagccataaacgcttaattaagttgtctat 253  Q
    ||||| |||||||| ||||||||||| || |||||||||| ||||||||||||||    
T  31875687 ataagcacttatatgataagcgcttatgctataaacgcttcattaagttgtctat 31875741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 106 - 160
Target Start/End: Original strand, 38036125 - 38036179
Alignment:
Q  106 atatggtttcagcttatttccataagctctccaggatagcttataaaaacagttt 160  Q
    ||||| |||||||||||||| |||||||||||| ||||||| || ||||||||||    
T  38036125 atatgttttcagcttatttcaataagctctccaagatagctaatcaaaacagttt 38036179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 112 - 157
Target Start/End: Complemental strand, 8060720 - 8060675
Alignment:
Q  112 tttcagcttatttccataagctctccaggatagcttataaaaacag 157  Q
    ||||||||||||||||||||||||| ||||| |||||| |||||||    
T  8060720 tttcagcttatttccataagctctctaggattgcttatgaaaacag 8060675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 112 - 157
Target Start/End: Complemental strand, 11183596 - 11183551
Alignment:
Q  112 tttcagcttatttccataagctctccaggatagcttataaaaacag 157  Q
    ||||||||||||||||||||||||||||| |||||| | |||||||    
T  11183596 tttcagcttatttccataagctctccagggtagcttgtgaaaacag 11183551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 112 - 197
Target Start/End: Original strand, 14929157 - 14929241
Alignment:
Q  112 tttcagcttatttccataagctctccaggatagcttataaaaacagtttgactttgttttatctatttgttatataaatggcttat 197  Q
    |||||||||||||||| ||||||| ||  ||||||||| |||||||||||||| | |||| ||| ||| ||||| |||| ||||||    
T  14929157 tttcagcttatttccaaaagctctgcaacatagcttatgaaaacagtttgactctattttgtct-tttattatagaaatagcttat 14929241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 112 - 157
Target Start/End: Complemental strand, 27028882 - 27028837
Alignment:
Q  112 tttcagcttatttccataagctctccaggatagcttataaaaacag 157  Q
    ||||||||||||| ||||||||||||| |||||||||| |||||||    
T  27028882 tttcagcttattttcataagctctccaagatagcttatgaaaacag 27028837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 112 - 157
Target Start/End: Original strand, 30277264 - 30277309
Alignment:
Q  112 tttcagcttatttccataagctctccaggatagcttataaaaacag 157  Q
    ||||||||||||||||||| ||||| |||||||||||| |||||||    
T  30277264 tttcagcttatttccataaactctctaggatagcttatgaaaacag 30277309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 112 - 175
Target Start/End: Complemental strand, 1112286 - 1112223
Alignment:
Q  112 tttcagcttatttccataagctctccaggatagcttataaaaacagtttgactttgttttatct 175  Q
    ||||| |||||||||||||| |||||||||| |  ||| |||||||||||||||| ||| ||||    
T  1112286 tttcaacttatttccataagttctccaggattgtatatgaaaacagtttgactttatttgatct 1112223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 112 - 155
Target Start/End: Complemental strand, 1433599 - 1433556
Alignment:
Q  112 tttcagcttatttccataagctctccaggatagcttataaaaac 155  Q
    ||||| ||||||| |||||||||||||||||||||||| |||||    
T  1433599 tttcaacttattttcataagctctccaggatagcttatgaaaac 1433556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 66 - 157
Target Start/End: Original strand, 28769312 - 28769403
Alignment:
Q  66 tttgaaagagcttatggaaacggcttatgatatgtcctaaatatggtttcagcttatttccataagctctccaggatagcttataaaaacag 157  Q
    ||||| ||||||| || |||  || ||||||||||||  ||  || ||||||||||||||||||| |||||||  ||||||||| |||||||    
T  28769312 tttgagagagcttgtgtaaatagcatatgatatgtccataagttgttttcagcttatttccataaactctccaaaatagcttatgaaaacag 28769403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 63 - 154
Target Start/End: Original strand, 30191111 - 30191202
Alignment:
Q  63 ctgtttgaaagagcttatggaaacggcttatgatatgtcctaaatatggtttcagcttatttccataagctctccaggatagcttataaaaa 154  Q
    |||||||  |||||||||||||||  ||||||| |||| | |||  || ||||||||||||||||||| |  | ||||||||||||| ||||    
T  30191111 ctgtttgggagagcttatggaaacaacttatgacatgttcaaaacttgttttcagcttatttccataaacatttcaggatagcttatcaaaa 30191202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 87 - 149
Target Start/End: Complemental strand, 11795168 - 11795106
Alignment:
Q  87 ggcttatgatatgtcctaaatatggtttcagcttatttccataagctctccaggatagcttat 149  Q
    ||||||||| ||||||  ||  || |||||||||||||||||||||||||||  |||||||||    
T  11795168 ggcttatgacatgtccataacctgttttcagcttatttccataagctctccataatagcttat 11795106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 118 - 156
Target Start/End: Complemental strand, 13652260 - 13652222
Alignment:
Q  118 cttatttccataagctctccaggatagcttataaaaaca 156  Q
    ||||||||| |||||||||||| ||||||||||||||||    
T  13652260 cttatttccttaagctctccagaatagcttataaaaaca 13652222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 118 - 156
Target Start/End: Complemental strand, 13710903 - 13710865
Alignment:
Q  118 cttatttccataagctctccaggatagcttataaaaaca 156  Q
    ||||||||| |||||||||||| ||||||||||||||||    
T  13710903 cttatttccttaagctctccagaatagcttataaaaaca 13710865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 112 - 154
Target Start/End: Original strand, 42215101 - 42215143
Alignment:
Q  112 tttcagcttatttccataagctctccaggatagcttataaaaa 154  Q
    ||||||||||||| ||||||||||||| |||||||||| ||||    
T  42215101 tttcagcttatttacataagctctccaagatagcttatgaaaa 42215143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 112 - 154
Target Start/End: Original strand, 42215325 - 42215367
Alignment:
Q  112 tttcagcttatttccataagctctccaggatagcttataaaaa 154  Q
    ||||||||||||| |||||||||||||||||||| ||| ||||    
T  42215325 tttcagcttatttacataagctctccaggatagcatatgaaaa 42215367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 112 - 150
Target Start/End: Complemental strand, 44401612 - 44401574
Alignment:
Q  112 tttcagcttatttccataagctctccaggatagcttata 150  Q
    |||||||||||||||||||| |||||||||| |||||||    
T  44401612 tttcagcttatttccataagttctccaggatggcttata 44401574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 112 - 154
Target Start/End: Original strand, 44617808 - 44617850
Alignment:
Q  112 tttcagcttatttccataagctctccaggatagcttataaaaa 154  Q
    ||||||||||||| |||||||||| ||||||||||| ||||||    
T  44617808 tttcagcttattttcataagctctacaggatagcttctaaaaa 44617850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 112 - 149
Target Start/End: Original strand, 2458585 - 2458622
Alignment:
Q  112 tttcagcttatttccataagctctccaggatagcttat 149  Q
    |||||| |||||||||||||||||| ||||||||||||    
T  2458585 tttcagtttatttccataagctctctaggatagcttat 2458622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 112 - 157
Target Start/End: Complemental strand, 8062380 - 8062335
Alignment:
Q  112 tttcagcttatttccataagctctccaggatagcttataaaaacag 157  Q
    ||||||||||||||||||| ||||| | |||||||||| |||||||    
T  8062380 tttcagcttatttccataatctctctaagatagcttatgaaaacag 8062335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 112 - 157
Target Start/End: Original strand, 11745671 - 11745716
Alignment:
Q  112 tttcagcttatttccataagctctccaggatagcttataaaaacag 157  Q
    |||||||||| || ||||||||| | ||||||||||||||||||||    
T  11745671 tttcagcttagtttcataagctcactaggatagcttataaaaacag 11745716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 112 - 157
Target Start/End: Complemental strand, 30013269 - 30013224
Alignment:
Q  112 tttcagcttatttccataagctctccaggatagcttataaaaacag 157  Q
    ||||||||||||||||| || ||| ||||||||||||| |||||||    
T  30013269 tttcagcttatttccattagttctacaggatagcttatgaaaacag 30013224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 112 - 157
Target Start/End: Complemental strand, 31705136 - 31705091
Alignment:
Q  112 tttcagcttatttccataagctctccaggatagcttataaaaacag 157  Q
    ||||||||||||||||||| ||||| |||| ||||||| |||||||    
T  31705136 tttcagcttatttccataaactctcaaggacagcttatgaaaacag 31705091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 151 - 219
Target Start/End: Complemental strand, 42597391 - 42597323
Alignment:
Q  151 aaaacagtttgactttgttttatctatttgttatataaatggcttat-cataagtacttatatcataagc 219  Q
    |||||| ||| ||||| |||||||| ||||||||| |||| |||||| |||||||||||||| |||||||    
T  42597391 aaaacaattttactttattttatct-tttgttatagaaatagcttatacataagtacttatagcataagc 42597323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 112 - 157
Target Start/End: Original strand, 44236842 - 44236887
Alignment:
Q  112 tttcagcttatttccataagctctccaggatagcttataaaaacag 157  Q
    ||||||||||||| |||||||||||||  ||||||||| |||||||    
T  44236842 tttcagcttattttcataagctctccaatatagcttatgaaaacag 44236887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 112 - 156
Target Start/End: Complemental strand, 4762560 - 4762516
Alignment:
Q  112 tttcagcttatttccataagctctccaggatagcttataaaaaca 156  Q
    ||||||||||||| |||||||||| || |||||||||| ||||||    
T  4762560 tttcagcttatttacataagctcttcaagatagcttatgaaaaca 4762516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 72 - 156
Target Start/End: Complemental strand, 5088943 - 5088859
Alignment:
Q  72 agagcttatggaaacggcttatgatatgtcctaaatatggtttcagcttatttccataagctctccaggatagcttataaaaaca 156  Q
    ||||||||||||||| | |||| | ||||||  ||  || ||||| |||||||| |||||||||||||||| |||| | ||||||    
T  5088943 agagcttatggaaacagtttataacatgtccataagctgttttcaacttatttcaataagctctccaggatcgcttgtgaaaaca 5088859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 112 - 156
Target Start/End: Complemental strand, 7646029 - 7645985
Alignment:
Q  112 tttcagcttatttccataagctctccaggatagcttataaaaaca 156  Q
    |||||||||||||||||||||| | |||| |||||||| ||||||    
T  7646029 tttcagcttatttccataagctttacaggttagcttatgaaaaca 7645985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 112 - 160
Target Start/End: Complemental strand, 7646257 - 7646209
Alignment:
Q  112 tttcagcttatttccataagctctccaggatagcttataaaaacagttt 160  Q
    |||||||||||||||||||||||||| ||  ||||||| || |||||||    
T  7646257 tttcagcttatttccataagctctcctggtcagcttatgaagacagttt 7646209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 112 - 156
Target Start/End: Original strand, 7918792 - 7918836
Alignment:
Q  112 tttcagcttatttccataagctctccaggatagcttataaaaaca 156  Q
    |||||||||||||||| ||||||| || |||||||||| ||||||    
T  7918792 tttcagcttatttccacaagctctacaagatagcttatgaaaaca 7918836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 121 - 157
Target Start/End: Original strand, 9836882 - 9836918
Alignment:
Q  121 atttccataagctctccaggatagcttataaaaacag 157  Q
    |||||||||||||||||| |||||||||| |||||||    
T  9836882 atttccataagctctccaagatagcttatgaaaacag 9836918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 112 - 160
Target Start/End: Complemental strand, 11494197 - 11494149
Alignment:
Q  112 tttcagcttatttccataagctctccaggatagcttataaaaacagttt 160  Q
    ||||||||||||| |||||||||| || |||||||||| |||| |||||    
T  11494197 tttcagcttattttcataagctcttcaagatagcttatgaaaatagttt 11494149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 66 - 190
Target Start/End: Original strand, 13000397 - 13000520
Alignment:
Q  66 tttgaaagagcttatggaaacggcttatgatatgtcctaaatatggtttcagcttatttccataagctctccaggatagcttataaaaacagtttgactt 165  Q
    |||| ||||| |||||| |||  ||||||| ||||||  ||  || |||||||||||||||||||||| | || || || |||| ||| ||||||||| |    
T  13000397 tttgcaagagtttatggtaacaacttatgacatgtccacaagttgttttcagcttatttccataagctttgcatgacagtttatgaaagcagtttgacat 13000496  T
Q  166 tgttttatctatttgttatataaat 190  Q
    | |||||| | || |||||||||||    
T  13000497 tattttatat-ttggttatataaat 13000520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 112 - 156
Target Start/End: Complemental strand, 29973132 - 29973088
Alignment:
Q  112 tttcagcttatttccataagctctccaggatagcttataaaaaca 156  Q
    |||||| |||||||||||| ||||| |||||||||||| ||||||    
T  29973132 tttcagtttatttccataaactctcaaggatagcttatgaaaaca 29973088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 112 - 156
Target Start/End: Complemental strand, 31862544 - 31862500
Alignment:
Q  112 tttcagcttatttccataagctctccaggatagcttataaaaaca 156  Q
    ||||||||||||| ||||||||||| |||||| ||||| ||||||    
T  31862544 tttcagcttattttcataagctctctaggataacttatgaaaaca 31862500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 116 - 160
Target Start/End: Original strand, 35220746 - 35220790
Alignment:
Q  116 agcttatttccataagctctccaggatagcttataaaaacagttt 160  Q
    |||||||||  ||||||||||||| ||||||||| ||||||||||    
T  35220746 agcttatttttataagctctccagaatagcttatgaaaacagttt 35220790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 119 - 175
Target Start/End: Original strand, 40280253 - 40280309
Alignment:
Q  119 ttatttccataagctctccaggatagcttataaaaacagtttgactttgttttatct 175  Q
    ||||||||||||||||| |  |||||||||| |||||| ||| ||||| ||||||||    
T  40280253 ttatttccataagctcttctagatagcttatgaaaacaattttactttattttatct 40280309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 83 - 143
Target Start/End: Original strand, 41606893 - 41606953
Alignment:
Q  83 aaacggcttatgatatgtcctaaatatggtttcagcttatttccataagctctccaggata 143  Q
    |||| |||||||| |||| | |||  || ||||||||||||||||||||||||| ||||||    
T  41606893 aaacagcttatgacatgttcaaaagttgttttcagcttatttccataagctctctaggata 41606953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 112 - 160
Target Start/End: Original strand, 42370380 - 42370428
Alignment:
Q  112 tttcagcttatttccataagctctccaggatagcttataaaaacagttt 160  Q
    ||||||||||||||||||| |||| || |||||||||| | ||||||||    
T  42370380 tttcagcttatttccataaactcttcatgatagcttatgagaacagttt 42370428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 53; Significance: 4e-21; HSPs: 35)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 113 - 197
Target Start/End: Original strand, 2205610 - 2205693
Alignment:
Q  113 ttcagcttatttccataagctctccaggatagcttataaaaacagtttgactttgttttatctatttgttatataaatggcttat 197  Q
    |||||||||||||||||||||||||| |||||||||| |||||| |||||||||||||||||| |||||| || |||| ||||||    
T  2205610 ttcagcttatttccataagctctccaagatagcttatgaaaacaatttgactttgttttatct-tttgttttagaaatagcttat 2205693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 63 - 174
Target Start/End: Original strand, 2460121 - 2460232
Alignment:
Q  63 ctgtttgaaagagcttatggaaacggcttatgatatgtcctaaatatggtttcagcttatttccataagctctccaggatagcttataaaaacagtttga 162  Q
    |||||||| |||||||||||||||  ||||||| ||||| | ||  || ||||| |||||||||||||||||||||  |||||||| ||||  |||||||    
T  2460121 ctgtttgagagagcttatggaaacaacttatgacatgtctttaagttgttttcaacttatttccataagctctccataatagcttacaaaacaagtttga 2460220  T
Q  163 ctttgttttatc 174  Q
    |||  |||||||    
T  2460221 cttgattttatc 2460232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 72 - 149
Target Start/End: Complemental strand, 34939835 - 34939758
Alignment:
Q  72 agagcttatggaaacggcttatgatatgtcc-taaatatggtttcagcttatttccataagctctccaggatagcttat 149  Q
    |||||||| |||||| |||||||| |||||| ||||| || ||||||||||||||||||| ||||||||||||||||||    
T  34939835 agagcttacggaaacagcttatgacatgtccataaat-tgttttcagcttatttccataaactctccaggatagcttat 34939758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 64 - 150
Target Start/End: Original strand, 32577957 - 32578043
Alignment:
Q  64 tgtttgaaagagcttatggaaacggcttatgatatgtcctaaatatggtttcagcttatttccataagctctccaggatagcttata 150  Q
    ||||||| |||||||||| ||||  ||||||| |||||||  |  || |||||||||||||||||| ||||| ||||||||||||||    
T  32577957 tgtttgagagagcttatgaaaacaacttatgacatgtccttgagctgttttcagcttatttccatatgctcttcaggatagcttata 32578043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 64 - 149
Target Start/End: Complemental strand, 34939612 - 34939527
Alignment:
Q  64 tgtttgaaagagcttatggaaacggcttatgatatgtcctaaatatggtttcagcttatttccataagctctccaggatagcttat 149  Q
    ||||||| |||||||||||||||  ||||||| | ||||  ||  || ||||||||||||||||||| |||| |||||||||||||    
T  34939612 tgtttgagagagcttatggaaacaacttatgacacgtccgtaagttgttttcagcttatttccataacctcttcaggatagcttat 34939527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 112 - 160
Target Start/End: Original strand, 3168280 - 3168328
Alignment:
Q  112 tttcagcttatttccataagctctccaggatagcttataaaaacagttt 160  Q
    ||||||||||||||| |||||||||||||||||||||  ||||||||||    
T  3168280 tttcagcttatttccttaagctctccaggatagcttaagaaaacagttt 3168328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 116 - 175
Target Start/End: Original strand, 4324476 - 4324535
Alignment:
Q  116 agcttatttccataagctctccaggatagcttataaaaacagtttgactttgttttatct 175  Q
    ||||||||| |||||| | ||||||||||||||| |||||||||||||||  ||||||||    
T  4324476 agcttatttgcataagttttccaggatagcttatgaaaacagtttgacttctttttatct 4324535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 112 - 155
Target Start/End: Original strand, 27909657 - 27909700
Alignment:
Q  112 tttcagcttatttccataagctctccaggatagcttataaaaac 155  Q
    |||||||||||||||||||||||||||| | |||||||||||||    
T  27909657 tttcagcttatttccataagctctccagtaaagcttataaaaac 27909700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 65 - 156
Target Start/End: Original strand, 32386535 - 32386626
Alignment:
Q  65 gtttgaaagagcttatggaaacggcttatgatatgtcctaaatatggtttcagcttatttccataagctctccaggatagcttataaaaaca 156  Q
    |||||||||||||||||||||   ||||| | ||||||  ||  || ||||||||||||| |||||||||||||||||| || || ||||||    
T  32386535 gtttgaaagagcttatggaaatatcttataacatgtccacaacttgttttcagcttattttcataagctctccaggataactaatgaaaaca 32386626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 63 - 157
Target Start/End: Original strand, 32171353 - 32171447
Alignment:
Q  63 ctgtttgaaagagcttatggaaacggcttatgatatgtcctaaatatggtttcagcttatttccataagctctccaggatagcttataaaaacag 157  Q
    |||||||| |||||||||| |||| |||||||| | ||||  ||  |  |||||||||||||||||||||| ||||||||| || || |||||||    
T  32171353 ctgtttgagagagcttatgaaaacagcttatgacaagtccagaagctattttcagcttatttccataagctatccaggataactaatgaaaacag 32171447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 152 - 249
Target Start/End: Complemental strand, 32975967 - 32975870
Alignment:
Q  152 aaacagtttgactttgttttatctatttgttatataaatggcttat-cataagtacttatatcataagcgcttaagccataaacgcttaattaagttgt 249  Q
    ||||||||||||||| |||||| | ||||||| | ||||  ||||| |||||  |||||||| | ||||||||| || |||||||||||||||||||||    
T  32975967 aaacagtttgactttattttatat-tttgttacagaaataacttatacataaacacttatatgagaagcgcttatgctataaacgcttaattaagttgt 32975870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 112 - 157
Target Start/End: Complemental strand, 1275200 - 1275155
Alignment:
Q  112 tttcagcttatttccataagctctccaggatagcttataaaaacag 157  Q
    |||||||||||||||||||||||||||||||| | ||| |||||||    
T  1275200 tttcagcttatttccataagctctccaggataacatatgaaaacag 1275155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 62 - 135
Target Start/End: Complemental strand, 9027679 - 9027606
Alignment:
Q  62 tctgtttgaaagagcttatggaaacggcttatgatatgtcctaaatatggtttcagcttatttccataagctct 135  Q
    ||||||||||||||||||||||||   ||||||| ||||||  ||  || ||||||||||||| ||||||||||    
T  9027679 tctgtttgaaagagcttatggaaataacttatgacatgtccataagttgttttcagcttattttcataagctct 9027606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 112 - 197
Target Start/End: Complemental strand, 31583730 - 31583646
Alignment:
Q  112 tttcagcttatttccataagctctccaggatagcttataaaaacagtttgactttgttttatctatttgttatataaatggcttat 197  Q
    ||||| |||||||||||||||| | | ||||||||||| |||||| ||||||||  ||||||||  |||||||| |||| ||||||    
T  31583730 tttcaacttatttccataagcttttcgggatagcttatgaaaacaatttgacttcattttatct-cttgttatagaaatagcttat 31583646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 112 - 157
Target Start/End: Original strand, 31686382 - 31686427
Alignment:
Q  112 tttcagcttatttccataagctctccaggatagcttataaaaacag 157  Q
    ||||||||||| ||| |||||||||||||||||||||| |||||||    
T  31686382 tttcagcttatgtccgtaagctctccaggatagcttatgaaaacag 31686427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 112 - 157
Target Start/End: Complemental strand, 32171518 - 32171473
Alignment:
Q  112 tttcagcttatttccataagctctccaggatagcttataaaaacag 157  Q
    |||||||||||||||||||||||||||||||| ||||  |||||||    
T  32171518 tttcagcttatttccataagctctccaggataccttactaaaacag 32171473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 112 - 148
Target Start/End: Complemental strand, 4420694 - 4420658
Alignment:
Q  112 tttcagcttatttccataagctctccaggatagctta 148  Q
    ||||||||||||||||||||||||||| |||||||||    
T  4420694 tttcagcttatttccataagctctccaagatagctta 4420658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 116 - 160
Target Start/End: Original strand, 28088245 - 28088289
Alignment:
Q  116 agcttatttccataagctctccaggatagcttataaaaacagttt 160  Q
    ||||||||||||| ||||||||| |||||||||| ||||||||||    
T  28088245 agcttatttccatgagctctccatgatagcttatgaaaacagttt 28088289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 114 - 157
Target Start/End: Complemental strand, 1401158 - 1401115
Alignment:
Q  114 tcagcttatttccataagctctccaggatagcttataaaaacag 157  Q
    ||||||||| ||||||||||||||| |||||||||| |||||||    
T  1401158 tcagcttatctccataagctctccatgatagcttatgaaaacag 1401115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 71 - 154
Target Start/End: Complemental strand, 2455902 - 2455819
Alignment:
Q  71 aagagcttatggaaacggcttatgatatgtcctaaatatggtttcagcttatttccataagctctccaggatagcttataaaaa 154  Q
    ||||||||||||||||  ||||||| ||| ||  ||  |  ||||| ||||||||||||||||||||| |||||||||| ||||    
T  2455902 aagagcttatggaaacaacttatgacatgcccataaactattttcaacttatttccataagctctccaagatagcttatgaaaa 2455819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 116 - 146
Target Start/End: Original strand, 7945907 - 7945937
Alignment:
Q  116 agcttatttccataagctctccaggatagct 146  Q
    |||||||||||||||||||||||||||||||    
T  7945907 agcttatttccataagctctccaggatagct 7945937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 112 - 150
Target Start/End: Original strand, 29957941 - 29957979
Alignment:
Q  112 tttcagcttatttccataagctctccaggatagcttata 150  Q
    ||||||||||||||||||||||||| || ||||||||||    
T  29957941 tttcagcttatttccataagctctctagaatagcttata 29957979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 112 - 166
Target Start/End: Complemental strand, 32665710 - 32665656
Alignment:
Q  112 tttcagcttatttccataagctctccaggatagcttataaaaacagtttgacttt 166  Q
    ||||||| |||||||| || ||||  ||||||||||||||||||| |||||||||    
T  32665710 tttcagcatatttccacaaactctttaggatagcttataaaaacaatttgacttt 32665656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 112 - 149
Target Start/End: Original strand, 281867 - 281904
Alignment:
Q  112 tttcagcttatttccataagctctccaggatagcttat 149  Q
    ||||||||||||||||| ||||||| ||||||||||||    
T  281867 tttcagcttatttccatgagctctctaggatagcttat 281904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 112 - 157
Target Start/End: Complemental strand, 6654666 - 6654621
Alignment:
Q  112 tttcagcttatttccataagctctccaggatagcttataaaaacag 157  Q
    |||||||||| |||||||||||||||| |||||| ||| |||||||    
T  6654666 tttcagcttacttccataagctctccaagatagcatattaaaacag 6654621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 71 - 156
Target Start/End: Original strand, 7931704 - 7931789
Alignment:
Q  71 aagagcttatggaaacggcttatgatatgtcctaaatatggtttcagcttatttccataagctctccaggatagcttataaaaaca 156  Q
    ||||||||||| ||||  ||||||| |||| || ||  || ||||||||||||||| ||||||||  |||||||||| | ||||||    
T  7931704 aagagcttatgaaaacaacttatgacatgttcttaagttgttttcagcttatttccgtaagctctgtaggatagcttttgaaaaca 7931789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 119 - 160
Target Start/End: Original strand, 19275662 - 19275703
Alignment:
Q  119 ttatttccataagctctccaggatagcttataaaaacagttt 160  Q
    ||||||||||||||||| || |||||||||| ||||||||||    
T  19275662 ttatttccataagctcttcatgatagcttatgaaaacagttt 19275703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 115 - 148
Target Start/End: Original strand, 24836224 - 24836257
Alignment:
Q  115 cagcttatttccataagctctccaggatagctta 148  Q
    |||||||||||||||||||||||| |||||||||    
T  24836224 cagcttatttccataagctctccatgatagctta 24836257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 112 - 157
Target Start/End: Original strand, 31807865 - 31807910
Alignment:
Q  112 tttcagcttatttccataagctctccaggatagcttataaaaacag 157  Q
    |||||||||||| ||| |||||| |||||||||||||| |||||||    
T  31807865 tttcagcttattgccacaagctcaccaggatagcttatgaaaacag 31807910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 112 - 157
Target Start/End: Original strand, 33787764 - 33787809
Alignment:
Q  112 tttcagcttatttccataagctctccaggatagcttataaaaacag 157  Q
    ||||||| ||||||||||||||||||| |||| ||||| |||||||    
T  33787764 tttcagcctatttccataagctctccaagataacttatgaaaacag 33787809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 72 - 133
Target Start/End: Complemental strand, 34404631 - 34404571
Alignment:
Q  72 agagcttatggaaacggcttatgatatgtcctaaatatggtttcagcttatttccataagct 133  Q
    |||||||||||||||  ||||||| |||||| ||| || |||||| ||||||||||||||||    
T  34404631 agagcttatggaaacaacttatgacatgtcc-aaacattgtttcaacttatttccataagct 34404571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 112 - 156
Target Start/End: Original strand, 7931808 - 7931852
Alignment:
Q  112 tttcagcttatttccataagctctccaggatagcttataaaaaca 156  Q
    ||||||||||||||||||||||||  |||||||||| | ||||||    
T  7931808 tttcagcttatttccataagctctataggatagcttgtgaaaaca 7931852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 112 - 156
Target Start/End: Complemental strand, 10031783 - 10031739
Alignment:
Q  112 tttcagcttatttccataagctctccaggatagcttataaaaaca 156  Q
    ||||| ||||||||| ||||||||||| || ||||||||||||||    
T  10031783 tttcatcttatttccttaagctctccaagacagcttataaaaaca 10031739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 116 - 156
Target Start/End: Original strand, 31812036 - 31812076
Alignment:
Q  116 agcttatttccataagctctccaggatagcttataaaaaca 156  Q
    ||||||||| ||||||||||||| |||||||||| ||||||    
T  31812036 agcttattttcataagctctccaagatagcttatgaaaaca 31812076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 112 - 160
Target Start/End: Complemental strand, 33887881 - 33887833
Alignment:
Q  112 tttcagcttatttccataagctctccaggatagcttataaaaacagttt 160  Q
    ||||| |||||||||||||||  | ||||||||||||| ||||||||||    
T  33887881 tttcaacttatttccataagcatttcaggatagcttatgaaaacagttt 33887833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 52; Significance: 2e-20; HSPs: 39)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 64 - 217
Target Start/End: Complemental strand, 7244779 - 7244626
Alignment:
Q  64 tgtttgaaagagcttatggaaacggcttatgatatg-tcctaaatatggtttcagcttatttccataagctctccaggatagcttataaaaacagtttga 162  Q
    |||||||||||||| ||||||||   |||||| ||| || ||| | || ||||||||||||| |||||||||||||  ||||||||| ||||||||||||    
T  7244779 tgtttgaaagagctgatggaaacaatttatgacatgctcataagt-tgttttcagcttattttcataagctctccaatatagcttatgaaaacagtttga 7244681  T
Q  163 ctttgttttatctatttgttatataaatggcttat-cataagtacttatatcataa 217  Q
    |||| |||||||| |||| |||| |||| |||||| |||||| |||||||| ||||    
T  7244680 ctttcttttatct-tttgatatagaaatagcttatacataagcacttatatgataa 7244626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 147 - 249
Target Start/End: Complemental strand, 31341188 - 31341086
Alignment:
Q  147 tataaaaacagtttgactttgttttatctatttgttatataaatggcttat-cataagtacttatatcataagcgcttaagccataaacgcttaattaag 245  Q
    ||||||| |||||||||||| |||||||| ||||||||| |||| |||||| |||||| | ||| || ||||||||||| || |||| ||||| ||||||    
T  31341188 tataaaaccagtttgactttattttatct-tttgttatacaaatagcttatacataagcatttagatgataagcgcttatgcaataagcgcttgattaag 31341090  T
Q  246 ttgt 249  Q
    ||||    
T  31341089 ttgt 31341086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 72 - 157
Target Start/End: Complemental strand, 4966247 - 4966162
Alignment:
Q  72 agagcttatggaaacggcttatgatatgtcctaaatatggtttcagcttatttccataagctctccaggatagcttataaaaacag 157  Q
    ||||||||| |||||  ||||||||||||||  ||  || |||||| ||||||||||||||||| |||||| |||||| |||||||    
T  4966247 agagcttatagaaaccacttatgatatgtccataagttgttttcagtttatttccataagctcttcaggatggcttatgaaaacag 4966162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 112 - 156
Target Start/End: Original strand, 24363620 - 24363664
Alignment:
Q  112 tttcagcttatttccataagctctccaggatagcttataaaaaca 156  Q
    ||||||||||||||||||| |||||||||||||||||| ||||||    
T  24363620 tttcagcttatttccataacctctccaggatagcttatgaaaaca 24363664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 112 - 160
Target Start/End: Complemental strand, 28165142 - 28165094
Alignment:
Q  112 tttcagcttatttccataagctctccaggatagcttataaaaacagttt 160  Q
    ||||| ||||||||||||||||||||| ||||||||||||| |||||||    
T  28165142 tttcaacttatttccataagctctccatgatagcttataaagacagttt 28165094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 119 - 174
Target Start/End: Complemental strand, 36060042 - 36059984
Alignment:
Q  119 ttatttccataagctctccaggatagcttataaaaacagttt---gactttgttttatc 174  Q
    ||||||||||||||| ||||||||||||||| ||||||||||   ||||||||||||||    
T  36060042 ttatttccataagctatccaggatagcttatgaaaacagtttcaagactttgttttatc 36059984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 92 - 156
Target Start/End: Original strand, 46056009 - 46056073
Alignment:
Q  92 atgatatgtcctaaatatggtttcagcttatttccataagctctccaggatagcttataaaaaca 156  Q
    |||||||||||  |||||| ||| |||||||||||||||||||| | ||||||||||| ||||||    
T  46056009 atgatatgtccataatatgtttttagcttatttccataagctctacgggatagcttatgaaaaca 46056073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 112 - 157
Target Start/End: Original strand, 9423613 - 9423658
Alignment:
Q  112 tttcagcttatttccataagctctccaggatagcttataaaaacag 157  Q
    |||||||||||||| | ||||||||||||||||||||| |||||||    
T  9423613 tttcagcttatttcaagaagctctccaggatagcttattaaaacag 9423658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 63 - 156
Target Start/End: Complemental strand, 39360123 - 39360030
Alignment:
Q  63 ctgtttgaaagagcttatggaaacggcttatgatatgtcctaaatatggtttcagcttatttccataagctctccaggatagcttataaaaaca 156  Q
    |||||||| |||| ||||||||||  ||||||| || |||  ||  || |||||||||||||| |||||||| |||||||||||| | ||||||    
T  39360123 ctgtttgatagagtttatggaaacaacttatgacatatccataagttgctttcagcttatttcaataagctcgccaggatagcttttgaaaaca 39360030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 64 - 148
Target Start/End: Original strand, 27626094 - 27626178
Alignment:
Q  64 tgtttgaaagagcttatggaaacggcttatgatatgtcctaaatatggtttcagcttatttccataagctctccaggatagctta 148  Q
    ||||||| | ||||||||||||| |||||||| ||||||  ||  || ||| | |||||||||||||||||| || |||||||||    
T  27626094 tgtttgagaaagcttatggaaacagcttatgacatgtccataaactgttttaaacttatttccataagctcttcatgatagctta 27626178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 72 - 160
Target Start/End: Original strand, 33645940 - 33646027
Alignment:
Q  72 agagcttatggaaacggcttatgatatgtcctaaatatggtttcagcttatttccataagctctccaggatagcttataaaaacagttt 160  Q
    |||||||||||||||  ||||||| |||||   ||  || ||| || |||||||||||||||||||| |||||||||| ||||||||||    
T  33645940 agagcttatggaaacaacttatgacatgtctataagttgtttttaggttatttccataagctctcca-gatagcttatgaaaacagttt 33646027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 113 - 157
Target Start/End: Complemental strand, 39334243 - 39334199
Alignment:
Q  113 ttcagcttatttccataagctctccaggatagcttataaaaacag 157  Q
    |||||||||||||||||||||| |||||||||||| | |||||||    
T  39334243 ttcagcttatttccataagctcgccaggatagcttttgaaaacag 39334199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 112 - 156
Target Start/End: Complemental strand, 39506007 - 39505963
Alignment:
Q  112 tttcagcttatttccataagctctccaggatagcttataaaaaca 156  Q
    ||||||||||||||||||| |||||||| ||||||||| ||||||    
T  39506007 tttcagcttatttccataaactctccagaatagcttatgaaaaca 39505963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 114 - 157
Target Start/End: Complemental strand, 6601416 - 6601373
Alignment:
Q  114 tcagcttatttccataagctctccaggatagcttataaaaacag 157  Q
    ||||||||||| ||||||| |||||| |||||||||||||||||    
T  6601416 tcagcttattttcataagcactccagaatagcttataaaaacag 6601373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 63 - 157
Target Start/End: Complemental strand, 12242344 - 12242250
Alignment:
Q  63 ctgtttgaaagagcttatggaaacggcttatgatatgtccta-aatatggtttcagcttatttccataagctctccaggatagcttataaaaacag 157  Q
    |||||||| |||||||||| ||||||||||||||||| |||| ||  || |||||||||||||| ||| | | |||||||||  |||| |||||||    
T  12242344 ctgtttgagagagcttatgcaaacggcttatgatatg-cctataagttgttttcagcttatttctatacgttgtccaggataatttattaaaacag 12242250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 117 - 197
Target Start/End: Complemental strand, 42656541 - 42656460
Alignment:
Q  117 gcttatttccataagctctccaggatagcttat--aaaaacagtttgactttgttttatctatttgttatataaatggcttat 197  Q
    |||||||| ||||||||||||| ||||||||||  |||||   ||||||||| |||||||| ||||||||| |||| ||||||    
T  42656541 gcttattttcataagctctccaagatagcttatacaaaaatgatttgactttattttatct-tttgttatagaaatagcttat 42656460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 112 - 154
Target Start/End: Original strand, 12234908 - 12234950
Alignment:
Q  112 tttcagcttatttccataagctctccaggatagcttataaaaa 154  Q
    ||||||||||||||||||||||||| |||| |||| |||||||    
T  12234908 tttcagcttatttccataagctctctaggaaagctcataaaaa 12234950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 114 - 156
Target Start/End: Complemental strand, 23721555 - 23721513
Alignment:
Q  114 tcagcttatttccataagctctccaggatagcttataaaaaca 156  Q
    ||||||||||||||||||| | | |||||||||||||||||||    
T  23721555 tcagcttatttccataagcgcacaaggatagcttataaaaaca 23721513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 64 - 157
Target Start/End: Original strand, 46281111 - 46281204
Alignment:
Q  64 tgtttgaaagagcttatggaaacggcttatgatatgtcc-taaatatggtttcagcttatttccataagctctccaggatagcttataaaaacag 157  Q
    |||||||||||| ||| ||||||  ||||||  |||||  ||||| || |||||||||||||  |||||| |||||| |||||||||||||||||    
T  46281111 tgtttgaaagagtttacggaaacaacttatgccatgtctataaat-tgttttcagcttatttatataagccctccagaatagcttataaaaacag 46281204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 112 - 157
Target Start/End: Complemental strand, 514818 - 514773
Alignment:
Q  112 tttcagcttatttccataagctctccaggatagcttataaaaacag 157  Q
    |||||||||||||  | ||||||||||||||||||||| |||||||    
T  514818 tttcagcttattttgacaagctctccaggatagcttatgaaaacag 514773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 112 - 157
Target Start/End: Original strand, 12792712 - 12792757
Alignment:
Q  112 tttcagcttatttccataagctctccaggatagcttataaaaacag 157  Q
    ||||||||||||||| |||||||| ||| ||||||||| |||||||    
T  12792712 tttcagcttatttccgtaagctcttcagaatagcttatcaaaacag 12792757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 116 - 157
Target Start/End: Original strand, 15321807 - 15321848
Alignment:
Q  116 agcttatttccataagctctccaggatagcttataaaaacag 157  Q
    |||||||||||||||||| | ||||||||||||| |||||||    
T  15321807 agcttatttccataagcttttcaggatagcttatgaaaacag 15321848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 63 - 172
Target Start/End: Original strand, 22551375 - 22551484
Alignment:
Q  63 ctgtttgaaagagcttatggaaacggcttatgatatgtcctaaatatggtttcagcttatttccataagctctccaggatagcttataaaaacagtttga 162  Q
    |||||||| |||| || || |||| |||||||| |||| | ||   || ||||||||||||| ||||||||||||| |||  ||||| |||| | |||||    
T  22551375 ctgtttgagagagattttgaaaacagcttatgacatgttcaaatgttgttttcagcttatttacataagctctccaagattacttatgaaaagaatttga 22551474  T
Q  163 ctttgtttta 172  Q
    |||| |||||    
T  22551475 ctttatttta 22551484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 112 - 157
Target Start/End: Original strand, 27378847 - 27378892
Alignment:
Q  112 tttcagcttatttccataagctctccaggatagcttataaaaacag 157  Q
    |||||| |||||| ||||||||||||||||||| |||| |||||||    
T  27378847 tttcagtttattttcataagctctccaggatagtttatgaaaacag 27378892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 124 - 161
Target Start/End: Original strand, 27517312 - 27517349
Alignment:
Q  124 tccataagctctccaggatagcttataaaaacagtttg 161  Q
    |||||||||||||||||||| ||||| |||||||||||    
T  27517312 tccataagctctccaggataacttatgaaaacagtttg 27517349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 63 - 100
Target Start/End: Original strand, 28727733 - 28727770
Alignment:
Q  63 ctgtttgaaagagcttatggaaacggcttatgatatgt 100  Q
    |||||||| |||||||||||||||||||||||| ||||    
T  28727733 ctgtttgagagagcttatggaaacggcttatgacatgt 28727770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 116 - 157
Target Start/End: Complemental strand, 30812195 - 30812154
Alignment:
Q  116 agcttatttccataagctctccaggatagcttataaaaacag 157  Q
    ||||||||||||||||||||||| ||||||| || |||||||    
T  30812195 agcttatttccataagctctccatgatagctaatgaaaacag 30812154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 119 - 156
Target Start/End: Complemental strand, 32210311 - 32210274
Alignment:
Q  119 ttatttccataagctctccaggatagcttataaaaaca 156  Q
    |||||||||||||||||| | |||||||||||||||||    
T  32210311 ttatttccataagctctcaaagatagcttataaaaaca 32210274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 63 - 148
Target Start/End: Complemental strand, 33894727 - 33894642
Alignment:
Q  63 ctgtttgaaagagcttatggaaacggcttatgatatgtcctaaatatggtttcagcttatttccataagctctccaggatagctta 148  Q
    |||||||  |||||||||| |||| || ||||| ||||||  ||  || |||||||||||||| |||| || ||||||||||||||    
T  33894727 ctgtttgtgagagcttatgaaaacagcatatgacatgtccataagttgttttcagcttatttcaataaactttccaggatagctta 33894642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 112 - 161
Target Start/End: Complemental strand, 35267413 - 35267364
Alignment:
Q  112 tttcagcttatttccataagctctccaggatagcttataaaaacagtttg 161  Q
    |||||||||||||| |||||||||||| |||| |||| ||||||| ||||    
T  35267413 tttcagcttatttctataagctctccaagataacttaaaaaaacaatttg 35267364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 112 - 149
Target Start/End: Complemental strand, 40428606 - 40428569
Alignment:
Q  112 tttcagcttatttccataagctctccaggatagcttat 149  Q
    ||||||||||||||||||||||||  ||||||||||||    
T  40428606 tttcagcttatttccataagctctttaggatagcttat 40428569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 72 - 157
Target Start/End: Original strand, 42281493 - 42281578
Alignment:
Q  72 agagcttatggaaacggcttatgatatgtcctaaatatggtttcagcttatttccataagctctccaggatagcttataaaaacag 157  Q
    ||||||||| ||||| |||||||| ||||    ||| || |||||||||||||| ||||||||||   |||||||||| |||||||    
T  42281493 agagcttatagaaacagcttatgacatgtaaataatttgttttcagcttatttctataagctctcagtgatagcttatgaaaacag 42281578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 66 - 166
Target Start/End: Complemental strand, 47354209 - 47354105
Alignment:
Q  66 tttgaaagagcttatggaaacggcttatgatatgtcc-taaata--tggtttcagcttattt-ccataagctctccaggatagcttataaaaacagtttg 161  Q
    |||||||||||||||| |||| |||| |||| ||||| | | ||  || ||||| ||||||| |||||||||||| ||||||| |||| ||||||||| |    
T  47354209 tttgaaagagcttatgaaaacagcttgtgatgtgtccattattaactgttttcaccttattttccataagctctctaggataggttatgaaaacagttgg 47354110  T
Q  162 acttt 166  Q
    |||||    
T  47354109 acttt 47354105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 115 - 156
Target Start/End: Original strand, 48917368 - 48917409
Alignment:
Q  115 cagcttatttccataagctctccaggatagcttataaaaaca 156  Q
    |||||||||| ||||||||||||| |||||||||| ||||||    
T  48917368 cagcttattttcataagctctccaagatagcttatgaaaaca 48917409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 112 - 156
Target Start/End: Original strand, 2825250 - 2825294
Alignment:
Q  112 tttcagcttatttccataagctctccaggatagcttataaaaaca 156  Q
    |||||||||||||||||||| |||| |||||||||| | ||||||    
T  2825250 tttcagcttatttccataagttctctaggatagcttgtgaaaaca 2825294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 112 - 160
Target Start/End: Complemental strand, 21453345 - 21453297
Alignment:
Q  112 tttcagcttatttccataagctctccaggatagcttataaaaacagttt 160  Q
    ||||||||||| | ||| ||||||| |||||||||||| ||||||||||    
T  21453345 tttcagcttatcttcattagctctctaggatagcttatgaaaacagttt 21453297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 112 - 160
Target Start/End: Complemental strand, 25596084 - 25596036
Alignment:
Q  112 tttcagcttatttccataagctctccaggatagcttataaaaacagttt 160  Q
    ||||| ||||||| ||||||||||||| |||||||||| |||| |||||    
T  25596084 tttcaacttattttcataagctctccaagatagcttatgaaaagagttt 25596036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 118 - 158
Target Start/End: Complemental strand, 28702795 - 28702755
Alignment:
Q  118 cttatttccataagctctccaggatagcttataaaaacagt 158  Q
    ||||||||||| ||||| |||||||||||||| ||||||||    
T  28702795 cttatttccatgagctcgccaggatagcttatgaaaacagt 28702755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 121 - 197
Target Start/End: Original strand, 35808954 - 35809029
Alignment:
Q  121 atttccataagctctccaggatagcttataaaaacagtttgactttgttttatctatttgttatataaatggcttat 197  Q
    |||| |||||| | |||||||||||||| ||||  ||||||||| | |||||||| ||||||||| |||| ||||||    
T  35808954 attttcataagttttccaggatagcttacaaaattagtttgactatattttatct-tttgttatagaaatagcttat 35809029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 52; Significance: 2e-20; HSPs: 43)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 114 - 223
Target Start/End: Complemental strand, 4191767 - 4191657
Alignment:
Q  114 tcagcttatttccataagctctccaggatagcttataaaaacagtttgacttt-gttttatctatttgttatataaatggcttat-cataagtacttata 211  Q
    |||||||||||||||| ||||||||||||| ||||| ||||||||||||||||  |||||||| ||||||||| |||| |||||| |||||| |||||||    
T  4191767 tcagcttatttccatacgctctccaggataacttatgaaaacagtttgactttatttttatct-tttgttatagaaatagcttatacataagcacttata 4191669  T
Q  212 tcataagcgctt 223  Q
    | |||| |||||    
T  4191668 tgataaacgctt 4191657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 63 - 174
Target Start/End: Original strand, 27123322 - 27123433
Alignment:
Q  63 ctgtttgaaagagcttatggaaacggcttatgatatgtcctaaatatggtttcagcttatttccataagctctccaggatagcttataaaaacagtttga 162  Q
    |||||||| |||||||||||||||  ||||||| ||||| | ||  || ||||| |||||||||||||||||||||  |||||||| ||||  |||||||    
T  27123322 ctgtttgagagagcttatggaaacaacttatgacatgtctttaagttgttttcaacttatttccataagctctccataatagcttacaaaacaagtttga 27123421  T
Q  163 ctttgttttatc 174  Q
    |||  |||||||    
T  27123422 cttgattttatc 27123433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 112 - 225
Target Start/End: Complemental strand, 19422449 - 19422334
Alignment:
Q  112 tttcagcttatttccataagctctccaggatagcttata--aaaacagtttgactttgttttatctatttgttatataaatggcttat-cataagtactt 208  Q
    ||||| ||||||||||||||||||||||||||| |||||  ||||  |||||||||| || ||||| ||||||||| ||||  ||||| |||||| | ||    
T  19422449 tttcaacttatttccataagctctccaggatagtttatatgaaaaatgtttgactttattatatct-tttgttatagaaataacttatacataagcattt 19422351  T
Q  209 atatcataagcgcttaa 225  Q
    |||| ||||||||||||    
T  19422350 atatgataagcgcttaa 19422334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 112 - 189
Target Start/End: Original strand, 5131269 - 5131349
Alignment:
Q  112 tttcagcttatttccataagctctccaggatagctt----ataaaaacagtttgactttgttttatctatttgttatataaa 189  Q
    ||||||||||||||||||||||||||||||||||||    || |||||| ||| ||||| |||||||| |||||||||||||    
T  5131269 tttcagcttatttccataagctctccaggatagcttttacatgaaaacattttaactttattttatct-tttgttatataaa 5131349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 112 - 164
Target Start/End: Complemental strand, 19429760 - 19429706
Alignment:
Q  112 tttcagcttatttccataagctctccaggatagcttata--aaaacagtttgact 164  Q
    |||||||||||||||||||||||||||||||||||||||  |||||| |||||||    
T  19429760 tttcagcttatttccataagctctccaggatagcttatatcaaaacaatttgact 19429706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 112 - 166
Target Start/End: Complemental strand, 28615574 - 28615520
Alignment:
Q  112 tttcagcttatttccataagctctccaggatagcttataaaaacagtttgacttt 166  Q
    ||||| ||||||||||||||||||||| |||||| ||||||||||||||| ||||    
T  28615574 tttcaccttatttccataagctctccaagatagcctataaaaacagtttggcttt 28615520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 71 - 156
Target Start/End: Original strand, 4798544 - 4798629
Alignment:
Q  71 aagagcttatggaaacggcttatgatatgtcctaaatatggtttcagcttatttccataagctctccaggatagcttataaaaaca 156  Q
    ||||||||||||||||||||| ||| |||| |  ||  || ||| ||||||||| ||||||||||||| |||||||||| ||||||    
T  4798544 aagagcttatggaaacggcttctgacatgtacataagctgttttgagcttatttgcataagctctccaagatagcttatgaaaaca 4798629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 112 - 212
Target Start/End: Complemental strand, 47970347 - 47970247
Alignment:
Q  112 tttcagcttatttccataagctctccaggatagcttataaaaacagtttgactttgttttatctatttgttatataaatggcttat-cataagtacttat 210  Q
    ||||||||||||| ||||||||||||| |||||  | | |||| ||||||||||  |||||||| ||||||||| |||| |||||| |||||| ||||||    
T  47970347 tttcagcttatttgcataagctctccatgatagaatttgaaaatagtttgacttcattttatct-tttgttatagaaatagcttatacataagcacttat 47970249  T
Q  211 at 212  Q
    ||    
T  47970248 at 47970247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 112 - 160
Target Start/End: Original strand, 18628562 - 18628610
Alignment:
Q  112 tttcagcttatttccataagctctccaggatagcttataaaaacagttt 160  Q
    ||||||||||||||||||||||||||| |||| ||||| ||||||||||    
T  18628562 tttcagcttatttccataagctctccaagataacttatgaaaacagttt 18628610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 112 - 156
Target Start/End: Original strand, 39063666 - 39063710
Alignment:
Q  112 tttcagcttatttccataagctctccaggatagcttataaaaaca 156  Q
    |||||| |||||| |||||||||||||||||||||||||||||||    
T  39063666 tttcagtttattttcataagctctccaggatagcttataaaaaca 39063710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 112 - 160
Target Start/End: Original strand, 53673677 - 53673725
Alignment:
Q  112 tttcagcttatttccataagctctccaggatagcttataaaaacagttt 160  Q
    ||||||||||||| ||||||||||||| |||||||||| ||||||||||    
T  53673677 tttcagcttatttacataagctctccaagatagcttatgaaaacagttt 53673725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 119 - 197
Target Start/End: Original strand, 51044506 - 51044584
Alignment:
Q  119 ttatttccataagctctccaggatagcttataaaaac-agtttgactttgttttatctatttgttatataaatggcttat 197  Q
    |||||| |||||| |||| |||||||||||| ||||| ||||||||||| |||||||| ||||||||| |||| ||||||    
T  51044506 ttattttcataagttctctaggatagcttatgaaaacaagtttgactttattttatct-tttgttatagaaatagcttat 51044584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 82 - 156
Target Start/End: Complemental strand, 29263451 - 29263377
Alignment:
Q  82 gaaacggcttatgatatgtcctaaatatggtttcagcttatttccataagctctccaggatagcttataaaaaca 156  Q
    ||||| ||||||||||||| |  ||  || |||||||||||||||| ||||||| ||||||||||||| ||||||    
T  29263451 gaaacagcttatgatatgttcataagttgttttcagcttatttccacaagctctgcaggatagcttatgaaaaca 29263377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 74 - 144
Target Start/End: Original strand, 29467605 - 29467675
Alignment:
Q  74 agcttatggaaacggcttatgatatgtcctaaatatggtttcagcttatttccataagctctccaggatag 144  Q
    ||||||| |||||||||||||| ||||||  ||  || ||||||||||||||||||| ||||| |||||||    
T  29467605 agcttatagaaacggcttatgacatgtccataagctgttttcagcttatttccataaactctctaggatag 29467675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 112 - 157
Target Start/End: Original strand, 7694029 - 7694074
Alignment:
Q  112 tttcagcttatttccataagctctccaggatagcttataaaaacag 157  Q
    ||||||||||||||||||| |||||||||||| ||||| |||||||    
T  7694029 tttcagcttatttccataaactctccaggataacttatgaaaacag 7694074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 112 - 149
Target Start/End: Complemental strand, 14011285 - 14011248
Alignment:
Q  112 tttcagcttatttccataagctctccaggatagcttat 149  Q
    ||||||||||||||||||||||||||| ||||||||||    
T  14011285 tttcagcttatttccataagctctccaagatagcttat 14011248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 116 - 157
Target Start/End: Original strand, 17975392 - 17975433
Alignment:
Q  116 agcttatttccataagctctccaggatagcttataaaaacag 157  Q
    |||||||||||| |||||||||| ||||||||||||||||||    
T  17975392 agcttatttccagaagctctccaagatagcttataaaaacag 17975433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 63 - 156
Target Start/End: Complemental strand, 21157868 - 21157775
Alignment:
Q  63 ctgtttgaaagagcttatggaaacggcttatgatatgtcctaaatatggtttcagcttatttccataagctctccaggatagcttataaaaaca 156  Q
    ||||||| |||||||||  ||||| |||||||| || | | |||  || ||| |||||||||||||||||||| ||||||||| ||| ||||||    
T  21157868 ctgtttggaagagcttacagaaacagcttatgacatttacaaaagctgtttttagcttatttccataagctcttcaggatagcatatgaaaaca 21157775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 91 - 156
Target Start/End: Complemental strand, 42866140 - 42866075
Alignment:
Q  91 tatgatatgtcctaaatatggtttcagcttatttccataagctctccaggatagcttataaaaaca 156  Q
    ||||||||||||  || ||| ||| |||||| |||||||||||||| |||||||||||| ||||||    
T  42866140 tatgatatgtccataagatgcttttagcttacttccataagctctcaaggatagcttatgaaaaca 42866075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 141 - 249
Target Start/End: Complemental strand, 30024702 - 30024592
Alignment:
Q  141 atagcttata--aaaacagtttgactttgttttatctatttgttatataaatggcttat-cataagtacttatatcataagcgcttaagccataaacgct 237  Q
    ||||||||||  |||||| ||| ||||| |||||||| ||||||||| ||||  ||||| ||||||||||||||| |||| |||||   | |||||| ||    
T  30024702 atagcttatatgaaaacaattttactttattttatct-tttgttatagaaataacttatgcataagtacttatatgataaacgcttctactataaacact 30024604  T
Q  238 taattaagttgt 249  Q
    ||||||||||||    
T  30024603 taattaagttgt 30024592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 63 - 154
Target Start/End: Original strand, 6987711 - 6987802
Alignment:
Q  63 ctgtttgaaagagcttatggaaacggcttatgatatgtcctaaatatggtttcagcttatttccataagctctccaggatagcttataaaaa 154  Q
    |||||||  |||||||||||| ||  ||||||| ||||||  ||  |  ||||| |||||||||||||||||||||||||||| || |||||    
T  6987711 ctgtttgggagagcttatggatacaacttatgacatgtccataaactattttcaacttatttccataagctctccaggatagcgtaaaaaaa 6987802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 122 - 165
Target Start/End: Complemental strand, 50396732 - 50396689
Alignment:
Q  122 tttccataagctctccaggatagcttataaaaacagtttgactt 165  Q
    |||||||||||||||||| | ||||||| |||||||||||||||    
T  50396732 tttccataagctctccagtaaagcttatgaaaacagtttgactt 50396689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 112 - 150
Target Start/End: Original strand, 2592328 - 2592366
Alignment:
Q  112 tttcagcttatttccataagctctccaggatagcttata 150  Q
    |||||||||||||||||||||||||||  ||||||||||    
T  2592328 tttcagcttatttccataagctctccaaaatagcttata 2592366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 112 - 150
Target Start/End: Complemental strand, 45732724 - 45732686
Alignment:
Q  112 tttcagcttatttccataagctctccaggatagcttata 150  Q
    ||||||||||||||||||||||||| |||||| ||||||    
T  45732724 tttcagcttatttccataagctctcgaggatatcttata 45732686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 112 - 154
Target Start/End: Original strand, 51808892 - 51808934
Alignment:
Q  112 tttcagcttatttccataagctctccaggatagcttataaaaa 154  Q
    ||||| |||||||| ||||||||||||||||||||||| ||||    
T  51808892 tttcaacttatttctataagctctccaggatagcttatcaaaa 51808934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 76 - 149
Target Start/End: Original strand, 2874607 - 2874680
Alignment:
Q  76 cttatggaaacggcttatgatatgtcctaaatatggtttcagcttatttccataagctctccaggatagcttat 149  Q
    |||||||||||  ||||||| ||||||  ||| |  |||| |||||||||||||||| |||| |||||||||||    
T  2874607 cttatggaaacaacttatgacatgtccataatctattttccgcttatttccataagcactcctggatagcttat 2874680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 112 - 173
Target Start/End: Complemental strand, 4500897 - 4500836
Alignment:
Q  112 tttcagcttatttccataagctctccaggatagcttataaaaacagtttgactttgttttat 173  Q
    ||||||||||||| ||||| |||||||  ||||||| | |||||| ||| ||||||||||||    
T  4500897 tttcagcttattttcataatctctccaaaatagcttttgaaaacaatttaactttgttttat 4500836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 116 - 157
Target Start/End: Original strand, 12650307 - 12650348
Alignment:
Q  116 agcttatttccataagctctccaggatagcttataaaaacag 157  Q
    |||| |||||||||||||||||||||||| |||| |||||||    
T  12650307 agctaatttccataagctctccaggataggttatgaaaacag 12650348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 112 - 157
Target Start/End: Original strand, 20105449 - 20105494
Alignment:
Q  112 tttcagcttatttccataagctctccaggatagcttataaaaacag 157  Q
    ||||||||||||| |||||||||| ||| |||| ||||||||||||    
T  20105449 tttcagcttatttacataagctcttcagaatagtttataaaaacag 20105494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 116 - 190
Target Start/End: Complemental strand, 23676744 - 23676668
Alignment:
Q  116 agcttatttccataagctctccaggatagcttata--aaaacagtttgactttgttttatctatttgttatataaat 190  Q
    |||||||||||||||||| || || ||||||||||  |||| |||| |||||| |||||||| ||| || |||||||    
T  23676744 agcttatttccataagctttcaagtatagcttataaaaaaatagttcgactttattttatctttttattgtataaat 23676668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 112 - 157
Target Start/End: Complemental strand, 35064906 - 35064861
Alignment:
Q  112 tttcagcttatttccataagctctccaggatagcttataaaaacag 157  Q
    ||||||||||||||||||| ||||||| |||| ||||| |||||||    
T  35064906 tttcagcttatttccataaactctccatgatatcttatgaaaacag 35064861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 112 - 157
Target Start/End: Complemental strand, 47800674 - 47800629
Alignment:
Q  112 tttcagcttatttccataagctctccaggatagcttataaaaacag 157  Q
    ||||||||||||| |||||||||| || |||||||||| |||||||    
T  47800674 tttcagcttattttcataagctcttcaagatagcttatgaaaacag 47800629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 112 - 157
Target Start/End: Complemental strand, 52259682 - 52259637
Alignment:
Q  112 tttcagcttatttccataagctctccaggatagcttataaaaacag 157  Q
    ||||| ||||||| ||||||||||||  ||||||||||||||||||    
T  52259682 tttcaacttattttcataagctctcccagatagcttataaaaacag 52259637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 124 - 156
Target Start/End: Complemental strand, 7730663 - 7730631
Alignment:
Q  124 tccataagctctccaggatagcttataaaaaca 156  Q
    |||||||||||||||||||||||||| ||||||    
T  7730663 tccataagctctccaggatagcttatgaaaaca 7730631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 112 - 156
Target Start/End: Original strand, 11158376 - 11158420
Alignment:
Q  112 tttcagcttatttccataagctctccaggatagcttataaaaaca 156  Q
    |||||||||||||||| |||||||| | |||||||||| ||||||    
T  11158376 tttcagcttatttccacaagctctctaagatagcttatgaaaaca 11158420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 124 - 156
Target Start/End: Original strand, 11262794 - 11262826
Alignment:
Q  124 tccataagctctccaggatagcttataaaaaca 156  Q
    |||||||||||||||||||||||||| ||||||    
T  11262794 tccataagctctccaggatagcttatgaaaaca 11262826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 112 - 156
Target Start/End: Complemental strand, 11264352 - 11264308
Alignment:
Q  112 tttcagcttatttccataagctctccaggatagcttataaaaaca 156  Q
    ||||| ||||||||||||||||||| ||||| |||||| ||||||    
T  11264352 tttcaacttatttccataagctctctaggatggcttatgaaaaca 11264308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 121 - 177
Target Start/End: Complemental strand, 19304589 - 19304533
Alignment:
Q  121 atttccataagctctccaggatagcttataaaaacagtttgactttgttttatctat 177  Q
    ||||||||||| |||||| |||| ||||| ||| |||||||  ||||||||||||||    
T  19304589 atttccataagttctccatgataacttatgaaagcagtttggttttgttttatctat 19304533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 112 - 148
Target Start/End: Original strand, 30377434 - 30377470
Alignment:
Q  112 tttcagcttatttccataagctctccaggatagctta 148  Q
    ||||||||||||| ||||||||||||| |||||||||    
T  30377434 tttcagcttattttcataagctctccaagatagctta 30377470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 112 - 156
Target Start/End: Complemental strand, 35405998 - 35405954
Alignment:
Q  112 tttcagcttatttccataagctctccaggatagcttataaaaaca 156  Q
    |||||||||| ||||||||||||||||||||| ||| | ||||||    
T  35405998 tttcagcttacttccataagctctccaggataacttttgaaaaca 35405954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 112 - 148
Target Start/End: Complemental strand, 43824334 - 43824298
Alignment:
Q  112 tttcagcttatttccataagctctccaggatagctta 148  Q
    |||||||||||||||||||||| ||||||||| ||||    
T  43824334 tttcagcttatttccataagctttccaggataactta 43824298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 112 - 160
Target Start/End: Complemental strand, 46110254 - 46110206
Alignment:
Q  112 tttcagcttatttccataagctctccaggatagcttataaaaacagttt 160  Q
    |||||||||||||| |||||||||| |  ||||||||| ||||||||||    
T  46110254 tttcagcttatttctataagctctcaatcatagcttatgaaaacagttt 46110206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 112 - 156
Target Start/End: Original strand, 50742855 - 50742899
Alignment:
Q  112 tttcagcttatttccataagctctccaggatagcttataaaaaca 156  Q
    ||||| || |||| |||||||||||||||||||||||| ||||||    
T  50742855 tttcaactcattttcataagctctccaggatagcttatgaaaaca 50742899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 44; Significance: 0.000000000000001; HSPs: 44)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 72 - 175
Target Start/End: Original strand, 23373292 - 23373394
Alignment:
Q  72 agagcttatggaaacggcttatgatatgtcctaaatatggtttcagcttatttccataagctctccaggatagcttataaaaacagtttgactttgtttt 171  Q
    ||||||||| |||||  ||||||| |||||| | || || ||||||||||||||  |||||||| ||||||||||||| ||||||| |||||||| ||||    
T  23373292 agagcttatagaaacaacttatgacatgtcc-acatctgttttcagcttatttctgtaagctcttcaggatagcttatgaaaacagattgactttatttt 23373390  T
Q  172 atct 175  Q
    ||||    
T  23373391 atct 23373394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 66 - 157
Target Start/End: Complemental strand, 27140575 - 27140484
Alignment:
Q  66 tttgaaagagcttatggaaacggcttatgatatgtcctaaatatggtttcagcttatttccataagctctccaggatagcttataaaaacag 157  Q
    ||||| |||| ||| |||||| |||||||| ||||||  ||  || ||||||||||||| ||||||||||||| ||||||||||||||||||    
T  27140575 tttgagagagtttaaggaaacagcttatgacatgtccataagttgttttcagcttatttgcataagctctccatgatagcttataaaaacag 27140484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 71 - 197
Target Start/End: Original strand, 46499852 - 46499979
Alignment:
Q  71 aagagcttatggaaacggcttatgatatgtcctaaatatggtttcagcttatttccataagctctccaggatagctt--ataaaaacagtttgactttgt 168  Q
    ||||| ||||||||||||||||||| ||||||  ||  || ||| | ||||||| ||||||||||||| || |||||  ||||||||| ||||||||| |    
T  46499852 aagagtttatggaaacggcttatgacatgtccctaaactgttttaaccttattttcataagctctccatgaaagcttaaataaaaacaatttgactttat 46499951  T
Q  169 tttatctatttgttatataaatggcttat 197  Q
    ||||||| ||| ||||| |||| ||||||    
T  46499952 tttatct-tttcttatagaaatagcttat 46499979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 112 - 160
Target Start/End: Original strand, 4700085 - 4700133
Alignment:
Q  112 tttcagcttatttccataagctctccaggatagcttataaaaacagttt 160  Q
    ||||||||||||| ||||||||||||||||||| |||||||||||||||    
T  4700085 tttcagcttattttcataagctctccaggatagtttataaaaacagttt 4700133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 122 - 197
Target Start/End: Complemental strand, 50319311 - 50319237
Alignment:
Q  122 tttccataagctctccaggatagcttataaaaacagtttgactttgttttatctatttgttatataaatggcttat 197  Q
    ||||||||||||||| |||||||||||| ||||||  |||||||| |||||||| ||||||||| |||| ||||||    
T  50319311 tttccataagctctctaggatagcttatgaaaacaacttgactttattttatct-tttgttatagaaatagcttat 50319237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 112 - 197
Target Start/End: Original strand, 28077088 - 28077172
Alignment:
Q  112 tttcagcttatttccataagctctccaggatagcttataaaaacagtttgactttgttttatctatttgttatataaatggcttat 197  Q
    |||||||||||||| |||||||||| |  ||||||||| |||||||||||| ||| |||||||| || |||||| |||| ||||||    
T  28077088 tttcagcttatttcaataagctctctaaaatagcttatgaaaacagtttgattttcttttatct-ttggttatagaaatagcttat 28077172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 63 - 152
Target Start/End: Original strand, 43954016 - 43954104
Alignment:
Q  63 ctgtttgaaagagcttatggaaacggcttatgatatgtcctaaatatggtttcagcttatttccataagctctccaggatagcttataaa 152  Q
    |||||||| | |||||||||||||  |||||||| |||| ||| | || ||||||||||| |||||||||||| ||||||| ||||||||    
T  43954016 ctgtttgagatagcttatggaaaccacttatgatttgtcataagt-tgttttcagcttatctccataagctcttcaggataacttataaa 43954104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 115 - 154
Target Start/End: Complemental strand, 44422747 - 44422708
Alignment:
Q  115 cagcttatttccataagctctccaggatagcttataaaaa 154  Q
    |||||||||| |||||||||||||||||||||||||||||    
T  44422747 cagcttattttcataagctctccaggatagcttataaaaa 44422708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 112 - 225
Target Start/End: Original strand, 4202170 - 4202283
Alignment:
Q  112 tttcagcttatttccataagctctccaggatagcttataaaaacagtttgactttgttttatctatttgttatataaatggcttat-cataagtacttat 210  Q
    ||||||||||||| | |||||||| |  |||||||| | ||||||| ||||||||| ||||||| ||||||||| ||||  ||||| | |||| ||||||    
T  4202170 tttcagcttattttcgtaagctctgccagatagcttttgaaaacagcttgactttggtttatct-tttgttatagaaataacttatacttaagcacttat 4202268  T
Q  211 atcataagcgcttaa 225  Q
    || |||| |||||||    
T  4202269 atgataaacgcttaa 4202283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 119 - 173
Target Start/End: Original strand, 29834931 - 29834985
Alignment:
Q  119 ttatttccataagctctccaggatagcttataaaaacagtttgactttgttttat 173  Q
    ||||||||||||||||| || |||||||||| |||||| ||||||||| ||||||    
T  29834931 ttatttccataagctctacatgatagcttatgaaaacaatttgactttattttat 29834985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 116 - 209
Target Start/End: Original strand, 38651454 - 38651547
Alignment:
Q  116 agcttatttccataagctctccaggatagcttataaaaacagtttgactttgttttatctatttgttatataaatggcttat-cataagtactta 209  Q
    |||||||||  ||||||||||||||||||||||| |||||| || ||||||  ||||||| ||||||||| || | |||||| |||||| |||||    
T  38651454 agcttatttttataagctctccaggatagcttatgaaaacaattcgactttagtttatct-tttgttatagaattagcttatacataagcactta 38651547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 63 - 160
Target Start/End: Complemental strand, 6279499 - 6279402
Alignment:
Q  63 ctgtttgaaagagcttatggaaacggcttatgatatgtcctaaatatggtttcagcttatttccataagctctccaggatagcttataaaaacagttt 160  Q
    |||||||| ||||||||||||||| | | |  | ||||||  ||  || ||||||| ||||||||||||||||| |||||||||||| |||| |||||    
T  6279499 ctgtttgagagagcttatggaaacagttaaccacatgtccataagttgttttcagcgtatttccataagctctctaggatagcttatgaaaatagttt 6279402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 124 - 197
Target Start/End: Original strand, 26293159 - 26293231
Alignment:
Q  124 tccataagctctccaggatagcttataaaaacagtttgactttgttttatctatttgttatataaatggcttat 197  Q
    ||||||| || ||||||||||||||| |||||| ||||||||| ||||| || ||||||||| |||| ||||||    
T  26293159 tccataaactttccaggatagcttatgaaaacaatttgactttatttta-ctttttgttatagaaatagcttat 26293231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 63 - 147
Target Start/End: Original strand, 30259456 - 30259540
Alignment:
Q  63 ctgtttgaaagagcttatggaaacggcttatgatatgtcc-taaatatggtttcagcttatttccataagctctccaggatagctt 147  Q
    |||||||||||||||||| |||||  |||| || |||||  ||||| || ||||| ||||||||||||||||||||| ||||||||    
T  30259456 ctgtttgaaagagcttatagaaacaacttacgacatgtcaataaat-tgttttcaacttatttccataagctctccatgatagctt 30259540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 112 - 157
Target Start/End: Complemental strand, 35017627 - 35017582
Alignment:
Q  112 tttcagcttatttccataagctctccaggatagcttataaaaacag 157  Q
    ||||| |||||||||||||||||||||||| ||||||| |||||||    
T  35017627 tttcaacttatttccataagctctccaggacagcttatgaaaacag 35017582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 112 - 149
Target Start/End: Original strand, 35590911 - 35590948
Alignment:
Q  112 tttcagcttatttccataagctctccaggatagcttat 149  Q
    ||||||||||||||||||||||||||| ||||||||||    
T  35590911 tttcagcttatttccataagctctccatgatagcttat 35590948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 112 - 156
Target Start/End: Complemental strand, 3924675 - 3924631
Alignment:
Q  112 tttcagcttatttccataagctctccaggatagcttataaaaaca 156  Q
    |||| |||||||||||||| |||| ||||||||||||||||||||    
T  3924675 tttcggcttatttccataaactcttcaggatagcttataaaaaca 3924631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 112 - 156
Target Start/End: Original strand, 12564518 - 12564562
Alignment:
Q  112 tttcagcttatttccataagctctccaggatagcttataaaaaca 156  Q
    |||||||||||||||||||| |||||| |||||||||| ||||||    
T  12564518 tttcagcttatttccataagttctccaagatagcttatgaaaaca 12564562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 112 - 156
Target Start/End: Complemental strand, 25479632 - 25479588
Alignment:
Q  112 tttcagcttatttccataagctctccaggatagcttataaaaaca 156  Q
    ||||||||||||| ||||||||||| |||||||||||| ||||||    
T  25479632 tttcagcttattttcataagctctctaggatagcttatgaaaaca 25479588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 112 - 156
Target Start/End: Original strand, 47598440 - 47598484
Alignment:
Q  112 tttcagcttatttccataagctctccaggatagcttataaaaaca 156  Q
    ||||||||| || ||||||||||||||||||||||||| ||||||    
T  47598440 tttcagcttgttgccataagctctccaggatagcttatgaaaaca 47598484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 112 - 151
Target Start/End: Complemental strand, 23402082 - 23402043
Alignment:
Q  112 tttcagcttatttccataagctctccaggatagcttataa 151  Q
    ||||||||||||||||||||||||| | ||||||||||||    
T  23402082 tttcagcttatttccataagctctcgatgatagcttataa 23402043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 63 - 150
Target Start/End: Original strand, 28689422 - 28689509
Alignment:
Q  63 ctgtttgaaagagcttatggaaacggcttatgatatgtcctaaatatggtttcagcttatttccataagctctccaggatagcttata 150  Q
    |||||| | ||| |||| |||||| |||||||| ||||||  ||  || ||||||||||||| |||||||| |||| |||||||||||    
T  28689422 ctgttttagagaacttacggaaacagcttatgacatgtccataagttgttttcagcttattttcataagctttccaagatagcttata 28689509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 112 - 159
Target Start/End: Original strand, 33723401 - 33723448
Alignment:
Q  112 tttcagcttatttccataagctctccaggatagcttataaaaacagtt 159  Q
    |||||||||||||||||||||| | |||| |||||||| |||||||||    
T  33723401 tttcagcttatttccataagctttacagggtagcttatgaaaacagtt 33723448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 76 - 172
Target Start/End: Complemental strand, 33975657 - 33975559
Alignment:
Q  76 cttatggaaacggcttatgatatgtcctaaatatggtttcagcttatttccataagctctccaggatagcttata--aaaacagtttgactttgtttta 172  Q
    |||| |||||| |||||||||||||||  ||  |  ||||||||||||| ||||||||||| ||||||| | |||  |||||||||||| ||| |||||    
T  33975657 cttaaggaaaccgcttatgatatgtccataaactattttcagcttattttcataagctctctaggatagttcatacgaaaacagtttgattttatttta 33975559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 112 - 154
Target Start/End: Complemental strand, 5047197 - 5047155
Alignment:
Q  112 tttcagcttatttccataagctctccaggatagcttataaaaa 154  Q
    |||||||||||||||||||||||| || |||||||||| ||||    
T  5047197 tttcagcttatttccataagctcttcatgatagcttatgaaaa 5047155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 112 - 162
Target Start/End: Complemental strand, 12641763 - 12641713
Alignment:
Q  112 tttcagcttatttccataagctctccaggatagcttataaaaacagtttga 162  Q
    ||||| ||||||| ||||||| ||| ||||||| |||||||||||||||||    
T  12641763 tttcatcttattttcataagcactctaggatagattataaaaacagtttga 12641713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 81 - 143
Target Start/End: Complemental strand, 26184830 - 26184768
Alignment:
Q  81 ggaaacggcttatgatatgtcctaaatatggtttcagcttatttccataagctctccaggata 143  Q
    |||||| |||||||| ||||||  ||  || |||||| |||||||||||||||||||||||||    
T  26184830 ggaaacagcttatgacatgtccataagctgttttcagattatttccataagctctccaggata 26184768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 115 - 153
Target Start/End: Complemental strand, 26916249 - 26916211
Alignment:
Q  115 cagcttatttccataagctctccaggatagcttataaaa 153  Q
    ||||||||||||||||||||||||| ||| |||||||||    
T  26916249 cagcttatttccataagctctccagaataacttataaaa 26916211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 112 - 157
Target Start/End: Original strand, 7137017 - 7137062
Alignment:
Q  112 tttcagcttatttccataagctctccaggatagcttataaaaacag 157  Q
    ||||||||||||| |||||| |||||| |||||||||| |||||||    
T  7137017 tttcagcttattttcataagttctccaagatagcttatgaaaacag 7137062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 112 - 149
Target Start/End: Complemental strand, 7472362 - 7472325
Alignment:
Q  112 tttcagcttatttccataagctctccaggatagcttat 149  Q
    ||||||||||||| ||||||||||||| ||||||||||    
T  7472362 tttcagcttattttcataagctctccaagatagcttat 7472325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 91 - 144
Target Start/End: Complemental strand, 10439758 - 10439705
Alignment:
Q  91 tatgatatgtcctaaatatggtttcagcttatttccataagctctccaggatag 144  Q
    ||||| ||||||  ||| || ||||||||||||||||||| |||||||||||||    
T  10439758 tatgacatgtccataatctgctttcagcttatttccataaactctccaggatag 10439705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 71 - 160
Target Start/End: Original strand, 11639394 - 11639483
Alignment:
Q  71 aagagcttatggaaacggcttatgatatgtcctaaatatggtttcagcttatttccataagctctccaggatagcttataaaaacagttt 160  Q
    ||||||||||| |||| |||||||| ||||||  ||  || ||| ||||||||| ||||||||||| || ||| |||||  |||||||||    
T  11639394 aagagcttatgaaaacagcttatgacatgtccataagctgtttttagcttattttcataagctctctagaataacttatgcaaacagttt 11639483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 112 - 145
Target Start/End: Complemental strand, 15361091 - 15361058
Alignment:
Q  112 tttcagcttatttccataagctctccaggatagc 145  Q
    ||||||||||||| ||||||||||||||||||||    
T  15361091 tttcagcttattttcataagctctccaggatagc 15361058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 112 - 149
Target Start/End: Original strand, 26461960 - 26461997
Alignment:
Q  112 tttcagcttatttccataagctctccaggatagcttat 149  Q
    ||||||||||||| |||||||||| |||||||||||||    
T  26461960 tttcagcttattttcataagctctgcaggatagcttat 26461997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 112 - 157
Target Start/End: Original strand, 27820356 - 27820401
Alignment:
Q  112 tttcagcttatttccataagctctccaggatagcttataaaaacag 157  Q
    ||||||||||||| |||||  |||||| ||||||||||||||||||    
T  27820356 tttcagcttattttcataaattctccaagatagcttataaaaacag 27820401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 63 - 160
Target Start/End: Original strand, 38867801 - 38867898
Alignment:
Q  63 ctgtttgaaagagcttatggaaacggcttatgatatgtcctaaatatggtttcagcttatttccataagctctccaggatagcttataaaaacagttt 160  Q
    |||||||| ||||||||||||||   ||||||||||||||   |  || ||| ||||||||| |||||| ||| || |||| ||||| ||||||||||    
T  38867801 ctgtttgagagagcttatggaaataacttatgatatgtccatcagttgtttttagcttattttcataagttcttcaagataacttatgaaaacagttt 38867898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 112 - 157
Target Start/End: Original strand, 51929794 - 51929839
Alignment:
Q  112 tttcagcttatttccataagctctccaggatagcttataaaaacag 157  Q
    |||| |||||||||||||||||||| || ||||||||| |||||||    
T  51929794 tttcggcttatttccataagctctctagaatagcttatgaaaacag 51929839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 112 - 173
Target Start/End: Complemental strand, 601092 - 601029
Alignment:
Q  112 tttcagcttatttccataagctctccaggatagcttata--aaaacagtttgactttgttttat 173  Q
    ||||||||||||| ||||| |||||||||||||| ||||  ||||||  |||||||| ||||||    
T  601092 tttcagcttattttcataaactctccaggatagcatatatgaaaacaacttgactttattttat 601029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 147 - 183
Target Start/End: Complemental strand, 4548715 - 4548679
Alignment:
Q  147 tataaaaacagtttgactttgttttatctatttgtta 183  Q
    |||||||||||||||||||| |||||||| |||||||    
T  4548715 tataaaaacagtttgactttattttatctttttgtta 4548679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 112 - 156
Target Start/End: Complemental strand, 30257734 - 30257690
Alignment:
Q  112 tttcagcttatttccataagctctccaggatagcttataaaaaca 156  Q
    |||||||||||||| |||||| ||||||||||| |||| ||||||    
T  30257734 tttcagcttatttctataagccctccaggatagtttatgaaaaca 30257690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 112 - 156
Target Start/End: Original strand, 32548650 - 32548694
Alignment:
Q  112 tttcagcttatttccataagctctccaggatagcttataaaaaca 156  Q
    ||||| ||||||||||||||||| ||| |||||||||| ||||||    
T  32548650 tttcaacttatttccataagctccccaagatagcttatgaaaaca 32548694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 112 - 156
Target Start/End: Original strand, 39347986 - 39348030
Alignment:
Q  112 tttcagcttatttccataagctctccaggatagcttataaaaaca 156  Q
    |||||||||||||||||||||| | |||||||| |||| ||||||    
T  39347986 tttcagcttatttccataagctttgcaggatagtttatgaaaaca 39348030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 205 - 253
Target Start/End: Original strand, 48133073 - 48133121
Alignment:
Q  205 acttatatcataagcgcttaagccataaacgcttaattaagttgtctat 253  Q
    |||||||| ||||||| ||| || |||| ||||||||||||||||||||    
T  48133073 acttatatgataagcgtttatgctataagcgcttaattaagttgtctat 48133121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 151 - 245
Target Start/End: Complemental strand, 48282124 - 48282028
Alignment:
Q  151 aaaacagtttgactttgttttatctatttgttatataaatggcttat-cataagtacttatatcataagcgc-ttaagccataaacgcttaattaag 245  Q
    |||| ||||||||||| |||||||| | | ||||| |||| |||| | |||||| |||||||| |||||||| |||||| |||| | ||||||||||    
T  48282124 aaaatagtttgactttattttatctttcttttatagaaatagcttttacataagcacttatatgataagcgcattaagcaataagcacttaattaag 48282028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 38; Significance: 0.000000000004; HSPs: 42)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 112 - 197
Target Start/End: Original strand, 32098349 - 32098433
Alignment:
Q  112 tttcagcttatttccataagctctccaggatagcttataaaaacagtttgactttgttttatctatttgttatataaatggcttat 197  Q
    ||||||||||||||| |||| ||||||  ||| ||||| |||||| ||||||||| |||||||| ||||||||| |||| ||||||    
T  32098349 tttcagcttatttccgtaagttctccataataacttatgaaaacactttgactttattttatct-tttgttatagaaatagcttat 32098433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 112 - 160
Target Start/End: Complemental strand, 36852523 - 36852475
Alignment:
Q  112 tttcagcttatttccataagctctccaggatagcttataaaaacagttt 160  Q
    |||||| |||||||||||||||||||| |||||||||| ||||||||||    
T  36852523 tttcagattatttccataagctctccaagatagcttatgaaaacagttt 36852475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 112 - 159
Target Start/End: Original strand, 1939351 - 1939398
Alignment:
Q  112 tttcagcttatttccataagctctccaggatagcttataaaaacagtt 159  Q
    ||||| |||||||||||||||||||||| ||||||||| |||||||||    
T  1939351 tttcaacttatttccataagctctccagtatagcttatgaaaacagtt 1939398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 74 - 165
Target Start/End: Complemental strand, 7283085 - 7282994
Alignment:
Q  74 agcttatggaaacggcttatgatatgtcctaaatatggtttcagcttatttccataagctctccaggatagcttataaaaacagtttgactt 165  Q
    ||||| |||||||  ||||||||||||||  ||  || ||||| ||||| ||||||||||||||   ||||||||| |||||||||||||||    
T  7283085 agcttttggaaacaacttatgatatgtccataagttgttttcatcttatatccataagctctcccacatagcttatgaaaacagtttgactt 7282994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 112 - 175
Target Start/End: Original strand, 15203460 - 15203523
Alignment:
Q  112 tttcagcttatttccataagctctccaggatagcttataaaaacagtttgactttgttttatct 175  Q
    |||||| ||||||| ||||| | |||| ||||||||||||||||||||| ||||| ||||||||    
T  15203460 tttcagtttatttctataagttttccacgatagcttataaaaacagtttaactttattttatct 15203523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 67 - 157
Target Start/End: Complemental strand, 12215903 - 12215813
Alignment:
Q  67 ttgaaagagcttatggaaacggcttatgatatgtcctaaatatggtttcagcttatttccataagctctccaggatagcttataaaaacag 157  Q
    |||||| ||||||||||||  |||||||| ||||||  ||  || ||||| | |||| |||||||||||| ||||| ||||||||||||||    
T  12215903 ttgaaaaagcttatggaaatagcttatgacatgtccataagctgttttcaccatattcccataagctctcaaggatggcttataaaaacag 12215813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 112 - 197
Target Start/End: Original strand, 33087641 - 33087723
Alignment:
Q  112 tttcagcttatttccataagctctccaggatagcttataaaaacagtttgactttgttttatctatttgttatataaatggcttat 197  Q
    ||||||||||||| |||||||||| ||||||||||||| || |||  || |||||| ||||||| ||||||||| |||| ||||||    
T  33087641 tttcagcttatttacataagctcttcaggatagcttattaacaca--ttaactttgctttatct-tttgttatagaaatagcttat 33087723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 112 - 154
Target Start/End: Complemental strand, 41817219 - 41817177
Alignment:
Q  112 tttcagcttatttccataagctctccaggatagcttataaaaa 154  Q
    ||||||||||||||||||||||||||||||||| |||| ||||    
T  41817219 tttcagcttatttccataagctctccaggatagtttatgaaaa 41817177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 116 - 157
Target Start/End: Original strand, 3078663 - 3078704
Alignment:
Q  116 agcttatttccataagctctccaggatagcttataaaaacag 157  Q
    |||||||||||| |||||||||| ||||||||||||||||||    
T  3078663 agcttatttccagaagctctccaagatagcttataaaaacag 3078704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 63 - 144
Target Start/End: Complemental strand, 25661207 - 25661126
Alignment:
Q  63 ctgtttgaaagagcttatggaaacggcttatgatatgtcctaaatatggtttcagcttatttccataagctctccaggatag 144  Q
    |||||||  |||||||| |||||  |||||||| ||||||| ||  || |||||| ||||||||||||||||| ||||||||    
T  25661207 ctgtttggcagagcttacggaaatagcttatgaaatgtccttaaactgttttcagattatttccataagctcttcaggatag 25661126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 63 - 160
Target Start/End: Complemental strand, 32821909 - 32821812
Alignment:
Q  63 ctgtttgaaagagcttatggaaacggcttatgatatgtcctaaatatggtttcagcttatttccataagctctccaggatagcttataaaaacagttt 160  Q
    ||||||| ||||| |||| |||||  ||||||| ||||||  ||  || |||||| ||||||| |||||||||  |||||||||||| ||||||||||    
T  32821909 ctgtttggaagagtttatagaaacaacttatgacatgtccataagctgttttcagtttatttctataagctctttaggatagcttatgaaaacagttt 32821812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 72 - 156
Target Start/End: Original strand, 43065429 - 43065513
Alignment:
Q  72 agagcttatggaaacggcttatgatatgtcc-taaatatggtttcagcttatttccataagctctccaggatagcttataaaaaca 156  Q
    |||||||||| ||||  ||||||| |||||| ||||| || |||||||||||||| |||||||||||| |||| ||||| ||||||    
T  43065429 agagcttatgaaaacaacttatgacatgtccataaat-tgttttcagcttatttcaataagctctccacgataacttatgaaaaca 43065513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 76 - 160
Target Start/End: Complemental strand, 8017521 - 8017437
Alignment:
Q  76 cttatggaaacggcttatgatatgtcctaaatatggtttcagcttatttccataagctctccaggatagcttataaaaacagttt 160  Q
    |||||| |||| ||||||||||||| |  ||| || |||| || ||||| |||||| |||||| |||||||||| ||||||||||    
T  8017521 cttatgaaaacagcttatgatatgttcataatttgttttctgcgtattttcataagttctccaagatagcttatgaaaacagttt 8017437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 112 - 156
Target Start/End: Complemental strand, 24097859 - 24097815
Alignment:
Q  112 tttcagcttatttccataagctctccaggatagcttataaaaaca 156  Q
    ||||||||||||| |||||||||||||||||| ||||| ||||||    
T  24097859 tttcagcttattttcataagctctccaggataacttatgaaaaca 24097815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 74 - 154
Target Start/End: Original strand, 34652017 - 34652097
Alignment:
Q  74 agcttatggaaacggcttatgatatgtcctaaatatggtttcagcttatttccataagctctccaggatagcttataaaaa 154  Q
    ||||||| |||||  ||||||| ||||||  ||  || ||||| ||||||||||||||||||||| |||||||||| ||||    
T  34652017 agcttatagaaacaacttatgacatgtccataagctgttttcaacttatttccataagctctccaagatagcttatgaaaa 34652097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 112 - 156
Target Start/End: Original strand, 35379035 - 35379079
Alignment:
Q  112 tttcagcttatttccataagctctccaggatagcttataaaaaca 156  Q
    ||||||||||||| ||||||||||||| |||||||||| ||||||    
T  35379035 tttcagcttattttcataagctctccaagatagcttatgaaaaca 35379079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 112 - 156
Target Start/End: Complemental strand, 35485968 - 35485924
Alignment:
Q  112 tttcagcttatttccataagctctccaggatagcttataaaaaca 156  Q
    |||||||| ||||||||| ||||| ||||||||||||||||||||    
T  35485968 tttcagctcatttccataggctcttcaggatagcttataaaaaca 35485924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 112 - 156
Target Start/End: Original strand, 40837454 - 40837498
Alignment:
Q  112 tttcagcttatttccataagctctccaggatagcttataaaaaca 156  Q
    |||||||||||||||||||||||| || |||||||||| ||||||    
T  40837454 tttcagcttatttccataagctctacatgatagcttattaaaaca 40837498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 114 - 157
Target Start/End: Original strand, 10198501 - 10198544
Alignment:
Q  114 tcagcttatttccataagctctccaggatagcttataaaaacag 157  Q
    ||||||||||||||||| ||||| ||||||| ||||||||||||    
T  10198501 tcagcttatttccataatctctctaggatagattataaaaacag 10198544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 113 - 160
Target Start/End: Original strand, 42409323 - 42409370
Alignment:
Q  113 ttcagcttatttccataagctctccaggatagcttataaaaacagttt 160  Q
    |||||||||||| |||||||||||||| ||| ||||| ||||||||||    
T  42409323 ttcagcttattttcataagctctccagaataacttatgaaaacagttt 42409370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 112 - 154
Target Start/End: Complemental strand, 42420048 - 42420006
Alignment:
Q  112 tttcagcttatttccataagctctccaggatagcttataaaaa 154  Q
    |||||||| ||||||||||||| ||||||||||||||| ||||    
T  42420048 tttcagctcatttccataagctatccaggatagcttatgaaaa 42420006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 112 - 173
Target Start/End: Original strand, 3227702 - 3227763
Alignment:
Q  112 tttcagcttatttccataagctctccaggatagcttataaaaacagtttgactttgttttat 173  Q
    ||||||||||||| || || |||||||  ||||||||| |||||| ||| ||||||||||||    
T  3227702 tttcagcttattttcaaaatctctccaaaatagcttatgaaaacaatttaactttgttttat 3227763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 116 - 157
Target Start/End: Original strand, 6167306 - 6167347
Alignment:
Q  116 agcttatttccataagctctccaggatagcttataaaaacag 157  Q
    |||||||||||||||| ||||||  |||||||||||||||||    
T  6167306 agcttatttccataagttctccaaaatagcttataaaaacag 6167347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 112 - 149
Target Start/End: Complemental strand, 11488328 - 11488291
Alignment:
Q  112 tttcagcttatttccataagctctccaggatagcttat 149  Q
    ||||||||||||| ||||| ||||||||||||||||||    
T  11488328 tttcagcttatttgcataatctctccaggatagcttat 11488291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 112 - 149
Target Start/End: Original strand, 15866687 - 15866724
Alignment:
Q  112 tttcagcttatttccataagctctccaggatagcttat 149  Q
    ||||||||| ||| ||||||||||||||||||||||||    
T  15866687 tttcagcttgtttacataagctctccaggatagcttat 15866724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 112 - 157
Target Start/End: Original strand, 29316794 - 29316839
Alignment:
Q  112 tttcagcttatttccataagctctccaggatagcttataaaaacag 157  Q
    |||||||||||||||||||| |||||| ||||||| || |||||||    
T  29316794 tttcagcttatttccataagttctccaagatagctgatgaaaacag 29316839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 112 - 157
Target Start/End: Complemental strand, 43205360 - 43205315
Alignment:
Q  112 tttcagcttatttccataagctctccaggatagcttataaaaacag 157  Q
    ||||| ||||||||||||||||||||  |||||||||| |||||||    
T  43205360 tttcaacttatttccataagctctccgtgatagcttatgaaaacag 43205315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 114 - 159
Target Start/End: Original strand, 43591531 - 43591576
Alignment:
Q  114 tcagcttatttccataagctctccaggatagcttataaaaacagtt 159  Q
    |||||||||||||| ||||||| | ||||||||||| |||||||||    
T  43591531 tcagcttatttccacaagctcttcgggatagcttatgaaaacagtt 43591576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 89 - 153
Target Start/End: Original strand, 1741511 - 1741574
Alignment:
Q  89 cttatgatatgtcctaaatatggtttcagcttatttccataagctctccaggatagcttataaaa 153  Q
    ||||||| |||||| |||| || ||||||||||||||||||| |||| |||||||  ||||||||    
T  1741511 cttatgaaatgtcc-aaatttgttttcagcttatttccataaactcttcaggataaattataaaa 1741574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 112 - 156
Target Start/End: Complemental strand, 1810715 - 1810671
Alignment:
Q  112 tttcagcttatttccataagctctccaggatagcttataaaaaca 156  Q
    ||||||||||||| ||||| |||| || |||||||||||||||||    
T  1810715 tttcagcttattttcataaactcttcaagatagcttataaaaaca 1810671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 112 - 160
Target Start/End: Original strand, 8187472 - 8187520
Alignment:
Q  112 tttcagcttatttccataagctctccaggatagcttataaaaacagttt 160  Q
    |||||| |||||||||||| ||||||| | |||||||| ||||||||||    
T  8187472 tttcaggttatttccataatctctccatggtagcttatgaaaacagttt 8187520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 112 - 156
Target Start/End: Complemental strand, 9478003 - 9477959
Alignment:
Q  112 tttcagcttatttccataagctctccaggatagcttataaaaaca 156  Q
    ||||| ||||||| ||||| |||||||||||||||||| ||||||    
T  9478003 tttcaacttattttcataacctctccaggatagcttatgaaaaca 9477959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 112 - 160
Target Start/End: Complemental strand, 9556290 - 9556242
Alignment:
Q  112 tttcagcttatttccataagctctccaggatagcttataaaaacagttt 160  Q
    ||||| ||||||| |||||||| || |||||||||||| ||||||||||    
T  9556290 tttcaacttattttcataagctttctaggatagcttatgaaaacagttt 9556242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 112 - 156
Target Start/End: Complemental strand, 11513949 - 11513905
Alignment:
Q  112 tttcagcttatttccataagctctccaggatagcttataaaaaca 156  Q
    |||||||||||||||| ||| |||||| |||||||||| ||||||    
T  11513949 tttcagcttatttccaaaagttctccatgatagcttatgaaaaca 11513905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 112 - 156
Target Start/End: Complemental strand, 16867790 - 16867746
Alignment:
Q  112 tttcagcttatttccataagctctccaggatagcttataaaaaca 156  Q
    ||||| ||||||||||||||||||||| |||||||| | ||||||    
T  16867790 tttcaacttatttccataagctctccaagatagcttgtgaaaaca 16867746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 112 - 160
Target Start/End: Original strand, 33319831 - 33319879
Alignment:
Q  112 tttcagcttatttccataagctctccaggatagcttataaaaacagttt 160  Q
    ||||||||||||| |||||| |||||| ||||| |||| ||||||||||    
T  33319831 tttcagcttattttcataagttctccaagatagtttatgaaaacagttt 33319879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 115 - 147
Target Start/End: Original strand, 35329840 - 35329872
Alignment:
Q  115 cagcttatttccataagctctccaggatagctt 147  Q
    |||||||||||||||||||||||| ||||||||    
T  35329840 cagcttatttccataagctctccaagatagctt 35329872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 115 - 166
Target Start/End: Original strand, 35391151 - 35391200
Alignment:
Q  115 cagcttatttccataagctctccaggatagcttataaaaacagtttgacttt 166  Q
    |||||||||||  ||||||||||| |||||||||| | ||||||||||||||    
T  35391151 cagcttatttc--taagctctccaagatagcttatgataacagtttgacttt 35391200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 112 - 219
Target Start/End: Complemental strand, 37034073 - 37033966
Alignment:
Q  112 tttcagcttatttccataagctctccaggatagcttataaaaacagtttgactttgttttatctatttgttatataaatggcttat-cataagtacttat 210  Q
    ||||| |||||||| ||||||||||||  ||| ||||| ||||  |||||||||| |||||||| ||| ||||| |||| | |||| |||||||| | ||    
T  37034073 tttcaacttatttctataagctctccataatatcttatgaaaatcgtttgactttattttatct-ttttttatagaaatagtttatacataagtattcat 37033975  T
Q  211 atcataagc 219  Q
    || ||||||    
T  37033974 atgataagc 37033966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 112 - 156
Target Start/End: Complemental strand, 39983393 - 39983349
Alignment:
Q  112 tttcagcttatttccataagctctccaggatagcttataaaaaca 156  Q
    |||||| |||||| ||| |||||||||||||||||||| ||||||    
T  39983393 tttcagtttattttcattagctctccaggatagcttatgaaaaca 39983349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 116 - 160
Target Start/End: Original strand, 42817399 - 42817443
Alignment:
Q  116 agcttatttccataagctctccaggatagcttataaaaacagttt 160  Q
    |||||| ||||||||||||| ||| ||||||||| ||||||||||    
T  42817399 agcttacttccataagctcttcagaatagcttatgaaaacagttt 42817443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 112 - 156
Target Start/End: Original strand, 43985022 - 43985066
Alignment:
Q  112 tttcagcttatttccataagctctccaggatagcttataaaaaca 156  Q
    ||||||||||||| |||||||||| || |||||||||| ||||||    
T  43985022 tttcagcttattttcataagctcttcaagatagcttatgaaaaca 43985066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 34; Significance: 0.0000000009; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 75 - 156
Target Start/End: Complemental strand, 306414 - 306333
Alignment:
Q  75 gcttatggaaacggcttatgatatgtcctaaatatggtttcagcttatttccataagctctccaggatagcttataaaaaca 156  Q
    |||||||||||| |||||||| ||| ||  ||  || |||||||||| || ||||||||||| |||||||||||| ||||||    
T  306414 gcttatggaaacagcttatgacatgcccataagctgttttcagcttacttacataagctctctaggatagcttatgaaaaca 306333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 29; Significance: 0.0000009; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 112 - 156
Target Start/End: Original strand, 159992 - 160036
Alignment:
Q  112 tttcagcttatttccataagctctccaggatagcttataaaaaca 156  Q
    |||||||||||||||| |||||||  |||||||||||| ||||||    
T  159992 tttcagcttatttccacaagctctttaggatagcttatgaaaaca 160036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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