View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF15970_low_21 (Length: 238)

Name: NF15970_low_21
Description: NF15970
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF15970_low_21
NF15970_low_21
[»] chr2 (55 HSPs)
chr2 (101-213)||(9450324-9450436)
chr2 (101-212)||(20566017-20566128)
chr2 (14-88)||(9444976-9445050)
chr2 (102-212)||(23932633-23932743)
chr2 (101-213)||(27665043-27665154)
chr2 (105-213)||(35729188-35729296)
chr2 (102-177)||(2544245-2544320)
chr2 (101-210)||(15411624-15411733)
chr2 (101-210)||(19228493-19228601)
chr2 (101-213)||(4821344-4821455)
chr2 (101-213)||(16126558-16126669)
chr2 (105-213)||(24729576-24729684)
chr2 (101-213)||(38248419-38248531)
chr2 (101-213)||(43806427-43806539)
chr2 (101-212)||(16919154-16919264)
chr2 (101-211)||(8770887-8770996)
chr2 (101-195)||(37471757-37471851)
chr2 (101-210)||(14377492-14377600)
chr2 (107-212)||(15231904-15232009)
chr2 (101-213)||(5583557-5583669)
chr2 (101-213)||(7757785-7757897)
chr2 (101-212)||(5853463-5853574)
chr2 (101-212)||(16493532-16493643)
chr2 (105-212)||(45062269-45062376)
chr2 (111-213)||(4576325-4576427)
chr2 (123-213)||(29157828-29157918)
chr2 (101-166)||(34817610-34817676)
chr2 (101-195)||(40562094-40562188)
chr2 (102-183)||(11660948-11661029)
chr2 (123-211)||(3951339-3951427)
chr2 (123-211)||(8847876-8847964)
chr2 (101-213)||(9747384-9747496)
chr2 (101-213)||(12016734-12016845)
chr2 (104-211)||(12919351-12919458)
chr2 (101-212)||(22704604-22704715)
chr2 (108-183)||(39607437-39607512)
chr2 (116-211)||(43941855-43941950)
chr2 (105-167)||(45302411-45302473)
chr2 (102-183)||(2579987-2580068)
chr2 (123-211)||(3286584-3286672)
chr2 (102-159)||(25068527-25068588)
chr2 (101-213)||(29142141-29142253)
chr2 (101-153)||(29981282-29981334)
chr2 (129-212)||(9895107-9895190)
chr2 (127-210)||(26003348-26003431)
chr2 (138-213)||(43388480-43388555)
chr2 (101-155)||(2051681-2051735)
chr2 (101-210)||(2060044-2060153)
chr2 (168-213)||(6109523-6109568)
chr2 (126-211)||(16123370-16123455)
chr2 (101-198)||(22705522-22705618)
chr2 (116-213)||(36731262-36731359)
chr2 (169-213)||(8065258-8065302)
chr2 (101-197)||(13351226-13351321)
chr2 (101-141)||(25948106-25948146)
[»] scaffold0073 (1 HSPs)
scaffold0073 (101-213)||(16534-16645)
[»] chr7 (49 HSPs)
chr7 (101-213)||(7040251-7040362)
chr7 (101-213)||(23982754-23982866)
chr7 (101-213)||(19889408-19889519)
chr7 (101-213)||(33343055-33343167)
chr7 (101-211)||(3530115-3530225)
chr7 (101-195)||(47707901-47707995)
chr7 (111-212)||(26300648-26300749)
chr7 (105-213)||(4969844-4969952)
chr7 (101-213)||(5909281-5909392)
chr7 (101-213)||(7170069-7170181)
chr7 (105-213)||(8091311-8091419)
chr7 (101-213)||(9332029-9332140)
chr7 (101-213)||(34270328-34270440)
chr7 (101-213)||(46290077-46290189)
chr7 (104-211)||(7899487-7899594)
chr7 (101-212)||(25709399-25709510)
chr7 (111-213)||(32117891-32117993)
chr7 (104-165)||(2276745-2276806)
chr7 (104-161)||(19868184-19868241)
chr7 (102-171)||(36991041-36991110)
chr7 (101-213)||(12085930-12086041)
chr7 (104-196)||(12624707-12624798)
chr7 (105-161)||(47200984-47201039)
chr7 (126-213)||(3561877-3561964)
chr7 (163-210)||(42750412-42750459)
chr7 (101-212)||(45501526-45501637)
chr7 (103-211)||(5833424-5833532)
chr7 (101-161)||(11680069-11680129)
chr7 (101-213)||(39757109-39757220)
chr7 (116-211)||(28061324-28061419)
chr7 (102-213)||(6587853-6587965)
chr7 (104-213)||(8420832-8420941)
chr7 (113-210)||(41331458-41331555)
chr7 (109-213)||(22041725-22041829)
chr7 (105-213)||(33072052-33072160)
chr7 (101-213)||(36548459-36548570)
chr7 (123-211)||(38798071-38798159)
chr7 (123-211)||(42593395-42593483)
chr7 (123-211)||(45645456-45645544)
chr7 (101-212)||(384431-384540)
chr7 (125-212)||(29398134-29398221)
chr7 (102-213)||(47457460-47457571)
chr7 (101-210)||(18102232-18102341)
chr7 (144-210)||(26037203-26037269)
chr7 (100-150)||(27696742-27696792)
chr7 (123-172)||(38798248-38798297)
chr7 (101-142)||(41572286-41572327)
chr7 (102-147)||(46185374-46185419)
chr7 (169-213)||(820540-820584)
[»] chr1 (49 HSPs)
chr1 (101-213)||(6307570-6307681)
chr1 (101-213)||(36490846-36490958)
chr1 (111-213)||(4249282-4249385)
chr1 (112-213)||(4249607-4249709)
chr1 (112-213)||(4249931-4250033)
chr1 (105-211)||(13241828-13241934)
chr1 (101-213)||(23576413-23576525)
chr1 (101-213)||(41624896-41625008)
chr1 (104-211)||(9516651-9516758)
chr1 (101-195)||(49392150-49392242)
chr1 (101-213)||(3168067-3168180)
chr1 (101-213)||(6754538-6754650)
chr1 (101-213)||(13321943-13322055)
chr1 (101-213)||(38812807-38812919)
chr1 (101-213)||(39150326-39150437)
chr1 (109-212)||(5057077-5057180)
chr1 (104-211)||(35438785-35438892)
chr1 (101-212)||(51920431-51920542)
chr1 (107-213)||(30171952-30172058)
chr1 (107-213)||(30187493-30187599)
chr1 (102-183)||(52337834-52337915)
chr1 (101-213)||(313817-313928)
chr1 (101-213)||(1502719-1502831)
chr1 (105-213)||(6180257-6180365)
chr1 (101-213)||(6569984-6570095)
chr1 (101-213)||(17919521-17919632)
chr1 (101-213)||(22167402-22167514)
chr1 (101-213)||(30362994-30363106)
chr1 (105-212)||(23591769-23591876)
chr1 (101-160)||(26978115-26978174)
chr1 (105-212)||(29635748-29635855)
chr1 (107-213)||(34802041-34802146)
chr1 (101-210)||(32543052-32543161)
chr1 (105-161)||(50467436-50467493)
chr1 (101-213)||(25465225-25465337)
chr1 (101-213)||(30288863-30288974)
chr1 (101-160)||(34050335-34050394)
chr1 (113-195)||(24669006-24669088)
chr1 (114-211)||(43909273-43909368)
chr1 (101-198)||(8062272-8062368)
chr1 (102-147)||(33048177-33048222)
chr1 (101-213)||(35512792-35512904)
chr1 (101-213)||(39310785-39310897)
chr1 (123-211)||(42589261-42589349)
chr1 (123-211)||(44013014-44013102)
chr1 (108-212)||(47990046-47990148)
chr1 (105-160)||(10096731-10096786)
chr1 (101-134)||(6520778-6520811)
chr1 (101-213)||(44918092-44918203)
[»] chr4 (61 HSPs)
chr4 (101-213)||(27019327-27019439)
chr4 (101-211)||(55813931-55814041)
chr4 (101-212)||(2096938-2097049)
chr4 (111-211)||(49250336-49250437)
chr4 (101-213)||(16069206-16069318)
chr4 (101-213)||(19468261-19468373)
chr4 (101-213)||(49181139-49181251)
chr4 (101-213)||(50352369-50352481)
chr4 (104-211)||(51070399-51070504)
chr4 (117-213)||(4329677-4329773)
chr4 (101-213)||(17409891-17410003)
chr4 (101-213)||(19450899-19451011)
chr4 (101-213)||(34941345-34941457)
chr4 (101-213)||(41415556-41415667)
chr4 (101-212)||(23545543-23545654)
chr4 (101-160)||(38222353-38222412)
chr4 (101-211)||(16667385-16667495)
chr4 (103-213)||(23051381-23051490)
chr4 (101-211)||(52391365-52391475)
chr4 (102-147)||(33559269-33559314)
chr4 (107-212)||(47326892-47326997)
chr4 (107-212)||(47341688-47341793)
chr4 (101-213)||(53376407-53376520)
chr4 (101-209)||(24684904-24685012)
chr4 (101-213)||(33632202-33632313)
chr4 (101-213)||(40049625-40049737)
chr4 (163-211)||(48910803-48910851)
chr4 (105-213)||(51691412-51691520)
chr4 (101-212)||(4779436-4779547)
chr4 (111-213)||(27756638-27756740)
chr4 (107-213)||(54495636-54495742)
chr4 (101-213)||(7349756-7349867)
chr4 (101-213)||(9759141-9759253)
chr4 (101-177)||(33288275-33288351)
chr4 (101-213)||(39876897-39877009)
chr4 (123-211)||(41887570-41887658)
chr4 (126-213)||(29190815-29190902)
chr4 (102-212)||(10658417-10658527)
chr4 (163-213)||(10813493-10813543)
chr4 (102-212)||(10872562-10872672)
chr4 (127-213)||(18882266-18882352)
chr4 (101-211)||(23553638-23553747)
chr4 (107-213)||(27362464-27362570)
chr4 (163-213)||(35999946-35999996)
chr4 (105-147)||(39796184-39796226)
chr4 (126-212)||(53961414-53961500)
chr4 (101-167)||(54506463-54506529)
chr4 (101-198)||(37432880-37432977)
chr4 (123-211)||(32459419-32459507)
chr4 (104-151)||(6875571-6875618)
chr4 (101-212)||(19838691-19838802)
chr4 (102-141)||(35645072-35645111)
chr4 (109-144)||(46607565-46607600)
chr4 (122-213)||(25843380-25843473)
chr4 (122-160)||(25938942-25938980)
chr4 (105-182)||(41970454-41970531)
chr4 (123-172)||(43759507-43759556)
chr4 (105-174)||(44571567-44571636)
chr4 (104-212)||(1378088-1378195)
chr4 (137-213)||(49228757-49228833)
chr4 (101-160)||(51268667-51268729)
[»] scaffold0305 (2 HSPs)
scaffold0305 (101-212)||(17996-18107)
scaffold0305 (102-212)||(17788-17898)
[»] chr5 (40 HSPs)
chr5 (101-212)||(15240950-15241061)
chr5 (101-213)||(2795591-2795702)
chr5 (101-213)||(6863623-6863735)
chr5 (101-213)||(11636799-11636910)
chr5 (105-213)||(35151290-35151398)
chr5 (105-213)||(3398291-3398399)
chr5 (101-213)||(8103579-8103691)
chr5 (101-213)||(18841704-18841816)
chr5 (101-213)||(30839848-30839960)
chr5 (101-213)||(36597646-36597758)
chr5 (101-212)||(40166349-40166459)
chr5 (101-211)||(16174623-16174732)
chr5 (111-212)||(32019984-32020086)
chr5 (101-211)||(41350270-41350379)
chr5 (105-210)||(31567493-31567598)
chr5 (126-213)||(4047504-4047591)
chr5 (111-213)||(13515925-13516027)
chr5 (101-183)||(26265073-26265155)
chr5 (123-212)||(23995416-23995505)
chr5 (116-212)||(35469636-35469732)
chr5 (101-210)||(3737874-3737987)
chr5 (105-212)||(15837346-15837453)
chr5 (101-211)||(28629946-28630056)
chr5 (101-212)||(31365950-31366060)
chr5 (101-212)||(39990039-39990148)
chr5 (126-211)||(14466495-14466580)
chr5 (123-211)||(12332426-12332514)
chr5 (123-211)||(31613150-31613238)
chr5 (123-211)||(31705018-31705106)
chr5 (123-211)||(40454150-40454238)
chr5 (101-209)||(40513018-40513126)
chr5 (104-183)||(18150484-18150563)
chr5 (102-161)||(38994126-38994184)
chr5 (101-174)||(7162910-7162981)
chr5 (126-212)||(12641993-12642079)
chr5 (123-173)||(13761759-13761809)
chr5 (102-195)||(15190941-15191034)
chr5 (106-204)||(36474637-36474734)
chr5 (105-174)||(10665003-10665072)
chr5 (101-173)||(11249996-11250068)
[»] chr3 (54 HSPs)
chr3 (101-212)||(46492343-46492454)
chr3 (105-211)||(7940863-7940969)
chr3 (101-209)||(23803049-23803157)
chr3 (101-212)||(13495361-13495472)
chr3 (101-213)||(2571335-2571447)
chr3 (101-213)||(10307833-10307945)
chr3 (102-154)||(26486435-26486487)
chr3 (101-211)||(51567821-51567928)
chr3 (101-208)||(11610982-11611088)
chr3 (104-211)||(23638050-23638157)
chr3 (105-171)||(14847041-14847107)
chr3 (107-213)||(38389520-38389626)
chr3 (101-213)||(51618117-51618226)
chr3 (103-212)||(13879808-13879916)
chr3 (102-211)||(37055367-37055476)
chr3 (126-213)||(3863421-3863508)
chr3 (126-213)||(16875024-16875111)
chr3 (102-212)||(20938125-20938235)
chr3 (101-212)||(33474473-33474584)
chr3 (101-212)||(35414809-35414920)
chr3 (101-212)||(38785947-38786058)
chr3 (102-213)||(45983574-45983685)
chr3 (102-213)||(50204471-50204582)
chr3 (103-173)||(54320720-54320789)
chr3 (101-213)||(12515473-12515585)
chr3 (104-160)||(23320140-23320196)
chr3 (101-213)||(29686388-29686499)
chr3 (126-213)||(23523038-23523125)
chr3 (113-210)||(9247817-9247912)
chr3 (107-213)||(36426408-36426514)
chr3 (117-211)||(37332196-37332290)
chr3 (101-211)||(40497114-40497224)
chr3 (105-211)||(42180123-42180229)
chr3 (105-211)||(48517479-48517585)
chr3 (101-211)||(54527707-54527817)
chr3 (103-211)||(8497421-8497529)
chr3 (101-209)||(9711011-9711119)
chr3 (102-158)||(24657608-24657664)
chr3 (123-211)||(29932353-29932441)
chr3 (123-211)||(29981507-29981595)
chr3 (101-213)||(51401507-51401619)
chr3 (101-167)||(30472935-30473002)
chr3 (117-160)||(32321776-32321819)
chr3 (127-210)||(39364872-39364955)
chr3 (122-213)||(49396468-49396559)
chr3 (102-160)||(2379124-2379182)
chr3 (127-213)||(2566575-2566661)
chr3 (163-213)||(11611105-11611155)
chr3 (117-159)||(19346181-19346223)
chr3 (111-192)||(54026952-54027034)
chr3 (138-211)||(46845144-46845217)
chr3 (121-213)||(32553453-32553545)
chr3 (105-141)||(46492279-46492315)
chr3 (101-177)||(50364258-50364333)
[»] chr8 (65 HSPs)
chr8 (103-213)||(12132052-12132162)
chr8 (105-211)||(34741666-34741772)
chr8 (104-213)||(14961662-14961771)
chr8 (101-213)||(26682135-26682247)
chr8 (101-213)||(28014857-28014969)
chr8 (101-213)||(35678274-35678385)
chr8 (102-213)||(6818085-6818196)
chr8 (104-210)||(7393247-7393352)
chr8 (104-210)||(20514703-20514809)
chr8 (101-210)||(44091385-44091494)
chr8 (101-213)||(3306054-3306166)
chr8 (101-213)||(9801736-9801847)
chr8 (101-213)||(14816125-14816236)
chr8 (101-213)||(14829504-14829615)
chr8 (101-213)||(27874680-27874792)
chr8 (117-213)||(39701802-39701898)
chr8 (105-211)||(9022106-9022215)
chr8 (101-211)||(13327942-13328051)
chr8 (101-213)||(2161454-2161566)
chr8 (101-213)||(7140458-7140569)
chr8 (101-213)||(9580108-9580220)
chr8 (101-213)||(10129171-10129282)
chr8 (101-213)||(12189587-12189699)
chr8 (101-213)||(12434015-12434127)
chr8 (102-213)||(32089465-32089577)
chr8 (101-177)||(35583434-35583509)
chr8 (101-213)||(39024856-39024968)
chr8 (101-213)||(45006037-45006148)
chr8 (146-213)||(7977990-7978057)
chr8 (101-212)||(40225987-40226098)
chr8 (102-211)||(4080395-4080503)
chr8 (101-213)||(18567415-18567526)
chr8 (101-213)||(26363989-26364101)
chr8 (101-205)||(36967077-36967181)
chr8 (104-212)||(38212944-38213052)
chr8 (126-213)||(1203693-1203780)
chr8 (102-160)||(28869513-28869572)
chr8 (111-213)||(29642679-29642782)
chr8 (102-160)||(1844612-1844670)
chr8 (107-213)||(26834634-26834740)
chr8 (107-213)||(31812186-31812292)
chr8 (102-211)||(4084544-4084652)
chr8 (102-211)||(4102851-4102959)
chr8 (124-213)||(15198899-15198988)
chr8 (105-161)||(34249748-34249805)
chr8 (123-211)||(42195-42283)
chr8 (117-197)||(297178-297258)
chr8 (102-213)||(8284567-8284679)
chr8 (123-211)||(10543630-10543718)
chr8 (101-213)||(38843771-38843883)
chr8 (123-211)||(42781563-42781651)
chr8 (101-212)||(16445736-16445846)
chr8 (124-212)||(26195259-26195349)
chr8 (153-211)||(28866932-28866990)
chr8 (169-211)||(32186321-32186363)
chr8 (169-211)||(34107171-34107213)
chr8 (101-213)||(5573355-5573465)
chr8 (144-213)||(19343835-19343904)
chr8 (137-182)||(28869376-28869421)
chr8 (105-154)||(31133907-31133955)
chr8 (101-174)||(44222473-44222545)
chr8 (101-177)||(9743929-9744004)
chr8 (164-212)||(13496709-13496757)
chr8 (123-211)||(16586723-16586811)
chr8 (104-160)||(38047989-38048045)
[»] chr6 (34 HSPs)
chr6 (105-173)||(31039775-31039843)
chr6 (107-212)||(10887102-10887207)
chr6 (101-211)||(6016923-6017033)
chr6 (111-211)||(31503818-31503919)
chr6 (101-213)||(14228125-14228237)
chr6 (101-213)||(17552586-17552698)
chr6 (101-213)||(28943768-28943880)
chr6 (101-213)||(31568177-31568288)
chr6 (105-213)||(34692425-34692533)
chr6 (101-183)||(1017807-1017889)
chr6 (101-211)||(8977467-8977577)
chr6 (103-212)||(30591163-30591272)
chr6 (101-213)||(17596408-17596520)
chr6 (105-213)||(29863301-29863409)
chr6 (105-213)||(31169762-31169870)
chr6 (111-204)||(17154700-17154793)
chr6 (105-210)||(23936378-23936483)
chr6 (105-213)||(29065424-29065531)
chr6 (105-213)||(29120277-29120384)
chr6 (101-213)||(33017791-33017903)
chr6 (109-212)||(27819627-27819730)
chr6 (101-188)||(30623393-30623480)
chr6 (107-213)||(18332687-18332793)
chr6 (101-211)||(31069583-31069692)
chr6 (101-177)||(16540671-16540747)
chr6 (127-211)||(31790917-31791001)
chr6 (123-211)||(34733702-34733790)
chr6 (105-212)||(29074438-29074544)
chr6 (105-212)||(29079202-29079308)
chr6 (105-212)||(29107011-29107117)
chr6 (163-213)||(3853072-3853122)
chr6 (101-210)||(17141342-17141451)
chr6 (114-175)||(31029462-31029523)
chr6 (101-141)||(18247774-18247814)
[»] scaffold0061 (1 HSPs)
scaffold0061 (101-213)||(52778-52889)
[»] scaffold0017 (1 HSPs)
scaffold0017 (101-213)||(145745-145856)
[»] scaffold0618 (1 HSPs)
scaffold0618 (101-210)||(8416-8525)
[»] scaffold0036 (1 HSPs)
scaffold0036 (105-212)||(94018-94125)
[»] scaffold0018 (1 HSPs)
scaffold0018 (102-213)||(182112-182221)
[»] scaffold0111 (2 HSPs)
scaffold0111 (107-213)||(37113-37219)
scaffold0111 (137-212)||(41085-41160)
[»] scaffold0192 (1 HSPs)
scaffold0192 (139-211)||(13564-13636)
[»] scaffold0727 (1 HSPs)
scaffold0727 (101-211)||(5759-5868)
[»] scaffold0128 (1 HSPs)
scaffold0128 (120-213)||(44293-44386)
[»] scaffold0155 (1 HSPs)
scaffold0155 (101-213)||(3412-3523)
[»] scaffold0011 (1 HSPs)
scaffold0011 (126-213)||(13177-13264)
[»] scaffold0074 (1 HSPs)
scaffold0074 (127-212)||(45497-45582)
[»] scaffold0009 (1 HSPs)
scaffold0009 (106-147)||(191379-191419)


Alignment Details
Target: chr2 (Bit Score: 81; Significance: 3e-38; HSPs: 55)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 101 - 213
Target Start/End: Original strand, 9450324 - 9450436
Alignment:
Q  101 caacaattatttattaaaaaattatatatttaatagaaaatacacaagtttcaatacaaacatactactttaaacttattaacgtatgcaaatttgcata 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||| || ||||| | |||| ||||||| |    
T  9450324 caacaattatttattaaaaaattatatatttaatagaaaatacacaaattccaatacaaacatactactttaaatttcttaacatgtgcagatttgcaca 9450423  T
Q  201 tgatagaaaaacc 213  Q
    |||||||||||||    
T  9450424 tgatagaaaaacc 9450436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 101 - 212
Target Start/End: Complemental strand, 20566128 - 20566017
Alignment:
Q  101 caacaattatttattaaaaaattatatatttaatagaaaatacacaagtttcaatacaaacatactactttaaacttattaacgtatgcaaatttgcata 200  Q
    ||||||||||||||||||| ||||| ||||||||| |||||||||||||| ||||||||||||| |||||||||||| ||||| | || ||||||||| |    
T  20566128 caacaattatttattaaaatattatctatttaataaaaaatacacaagttccaatacaaacataatactttaaacttcttaacatgtgtaaatttgcaca 20566029  T
Q  201 tgatagaaaaac 212  Q
    ||||||||||||    
T  20566028 tgatagaaaaac 20566017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 14 - 88
Target Start/End: Original strand, 9444976 - 9445050
Alignment:
Q  14 caacttcaacatcattactaacaaattcgatggattttctaaaattttctctctctcaaaatgtgctctataacc 88  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||    
T  9444976 caacttcaacatcattactaacaaattcgatgaattttctaaaattttctctctctcaaaatgtgctctgtaacc 9445050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 102 - 212
Target Start/End: Original strand, 23932633 - 23932743
Alignment:
Q  102 aacaattatttattaaaaaattatatatttaatagaaaatacacaagtttcaatacaaacatactactttaaacttattaacgtatgcaaatttgcatat 201  Q
    ||||||||||||||||||| || |||| |||||| ||||| |||||||| | ||||||   ||||| ||||||||| ||||  |||||||||||||| ||    
T  23932633 aacaattatttattaaaaagttttatagttaatataaaatgcacaagttccgatacaattttactattttaaacttcttaatatatgcaaatttgcacat 23932732  T
Q  202 gatagaaaaac 212  Q
    |||||||||||    
T  23932733 gatagaaaaac 23932743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 101 - 213
Target Start/End: Complemental strand, 27665154 - 27665043
Alignment:
Q  101 caacaattatttattaaaaaattatatatttaatagaaaatacacaagtttcaatacaaacatactactttaaacttattaacgtatgcaaatttgcata 200  Q
    |||||||||||||||||||  ||| |||||||||| |||| ||||||||| |||  ||||  ||||||||||||||| ||| | | |||||||||||| |    
T  27665154 caacaattatttattaaaag-ttacatatttaatataaaaaacacaagttccaagtcaaagttactactttaaacttcttatcatgtgcaaatttgcaca 27665056  T
Q  201 tgatagaaaaacc 213  Q
    |||||||||||||    
T  27665055 tgatagaaaaacc 27665043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 105 - 213
Target Start/End: Original strand, 35729188 - 35729296
Alignment:
Q  105 aattatttattaaaaaattatatatttaatagaaaatacacaagtttcaatacaaacatactactttaaacttattaacgtatgcaaatttgcatatgat 204  Q
    |||||||||||||||| ||||||||||| || |||||||||||||| ||||| |||  | ||||||||||||| | ||| | |||||||||| | ||| |    
T  35729188 aattatttattaaaaatttatatatttactataaaatacacaagttccaatataaatttgctactttaaacttctcaacatgtgcaaatttgtacatgtt 35729287  T
Q  205 agaaaaacc 213  Q
    |||||||||    
T  35729288 agaaaaacc 35729296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 102 - 177
Target Start/End: Complemental strand, 2544320 - 2544245
Alignment:
Q  102 aacaattatttattaaaaaattatatatttaatagaaaatacacaagtttcaatacaaacatactactttaaactt 177  Q
    ||||||||||||||||||||||||| ||| |||| ||||||||||||||| ||||||||| ||||| ||| |||||    
T  2544320 aacaattatttattaaaaaattatacattaaatataaaatacacaagttttaatacaaacttactattttgaactt 2544245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 101 - 210
Target Start/End: Complemental strand, 15411733 - 15411624
Alignment:
Q  101 caacaattatttattaaaaaattatatatttaatagaaaatacacaagtttcaatacaaacatactactttaaacttattaacgtatgcaaatttgcata 200  Q
    ||||||| ||||||||||||  || |||||||||| |||||  ||||||||||| |||||  ||||| ||||||||| ||||| | |||||||||||| |    
T  15411733 caacaataatttattaaaaagctacatatttaatataaaatgaacaagtttcaagacaaagttactattttaaacttcttaacatgtgcaaatttgcaca 15411634  T
Q  201 tgatagaaaa 210  Q
    || |||||||    
T  15411633 tgttagaaaa 15411624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 101 - 210
Target Start/End: Original strand, 19228493 - 19228601
Alignment:
Q  101 caacaattatttattaaaaaattatatatttaatagaaaatacacaagtttcaatacaaacatactactttaaacttattaacgtatgcaaatttgcata 200  Q
    ||||||||||| |||||||  ||| |||||||||| |||| ||||||||| |||  ||||  ||||||||||||||| ||||| | |||||||||||| |    
T  19228493 caacaattattgattaaaag-ttacatatttaatacaaaaaacacaagttccaagtcaaagttactactttaaacttcttaacatgtgcaaatttgcaca 19228591  T
Q  201 tgatagaaaa 210  Q
    ||||||||||    
T  19228592 tgatagaaaa 19228601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 101 - 213
Target Start/End: Original strand, 4821344 - 4821455
Alignment:
Q  101 caacaattatttattaaaaaattatatatttaatagaaaatacacaagtttcaatacaaacatactactttaaacttattaacgtatgcaaatttgcata 200  Q
    |||||||||||||||||||  | | |||||||||| |||| |||||||||||||  ||||  ||||||||||||||| ||| | | |||||||||||| |    
T  4821344 caacaattatttattaaaagct-acatatttaatataaaaaacacaagtttcaaatcaaagttactactttaaacttcttatcatgtgcaaatttgcaca 4821442  T
Q  201 tgatagaaaaacc 213  Q
    | |||||||||||    
T  4821443 taatagaaaaacc 4821455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 101 - 213
Target Start/End: Complemental strand, 16126669 - 16126558
Alignment:
Q  101 caacaattatttattaaaaaattatatatttaatagaaaatacacaagtttcaatacaaacatactactttaaacttattaacgtatgcaaatttgcata 200  Q
    ||||||||||| |||||||  | | |||||||||| |||| |||||||||||||   |||  ||||||||||||||| ||||| | |||||||||||| |    
T  16126669 caacaattattgattaaaagct-acatatttaatataaaaaacacaagtttcaagttaaagttactactttaaacttcttaacatgtgcaaatttgcaca 16126571  T
Q  201 tgatagaaaaacc 213  Q
    |||||||||||||    
T  16126570 tgatagaaaaacc 16126558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 105 - 213
Target Start/End: Complemental strand, 24729684 - 24729576
Alignment:
Q  105 aattatttattaaaaaattatatatttaatagaaaatacacaagtttcaatacaaacatactactttaaacttattaacgtatgcaaatttgcatatgat 204  Q
    |||||||||||||||| |||| || |||||| |||||| |||| || |||| ||||  ||||| |||||| || ||||| | |||||||||||| |||||    
T  24729684 aattatttattaaaaagttatgtaattaatacaaaatatacaaattccaatgcaaagttactattttaaatttcttaacatgtgcaaatttgcacatgat 24729585  T
Q  205 agaaaaacc 213  Q
    |||||||||    
T  24729584 agaaaaacc 24729576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 101 - 213
Target Start/End: Complemental strand, 38248531 - 38248419
Alignment:
Q  101 caacaattatttattaaaaaattatatatttaatagaaaatacacaagtttcaatacaaacatactactttaaacttattaacgtatgcaaatttgcata 200  Q
    |||||||||||||  |||||||||||||||||||| |||||   |||||| ||||  |||  ||||| |||||| || ||||| | |||||||||||| |    
T  38248531 caacaattatttaacaaaaaattatatatttaatacaaaatgttcaagttccaatgtaaaattactattttaaatttcttaacatgtgcaaatttgcaca 38248432  T
Q  201 tgatagaaaaacc 213  Q
    |||||||||||||    
T  38248431 tgatagaaaaacc 38248419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 101 - 213
Target Start/End: Original strand, 43806427 - 43806539
Alignment:
Q  101 caacaattatttattaaaaaattatatatttaatagaaaatacacaagtttcaatacaaacatactactttaaacttattaacgtatgcaaatttgcata 200  Q
    ||||||||||||||| |||| || |||||||||||  ||||  |||||||||||||||||  | ||| ||||||||| ||||| | ||||||||| || |    
T  43806427 caacaattatttattcaaaagttttatatttaatattaaatgtacaagtttcaatacaaaatttctattttaaactttttaacatgtgcaaatttacaca 43806526  T
Q  201 tgatagaaaaacc 213  Q
     ||||||||||||    
T  43806527 cgatagaaaaacc 43806539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 101 - 212
Target Start/End: Complemental strand, 16919264 - 16919154
Alignment:
Q  101 caacaattatttattaaaaaattatatatttaatagaaaatacacaagtttcaatacaaacatactactttaaacttattaacgtatgcaaatttgcata 200  Q
    ||||||||||| |||||||  ||| |||||||||| |||| |||||||||||||  ||||  ||||||||||||||| ||||  | |||||||||||| |    
T  16919264 caacaattattgattaaaag-ttacatatttaatataaaaaacacaagtttcaagtcaaagttactactttaaacttgttaatatgtgcaaatttgcaca 16919166  T
Q  201 tgatagaaaaac 212  Q
    ||||||| ||||    
T  16919165 tgatagataaac 16919154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 101 - 211
Target Start/End: Complemental strand, 8770996 - 8770887
Alignment:
Q  101 caacaattatttattaaaaaattatatatttaatagaaaatacacaagtttcaatacaaacatactactttaaacttattaacgtatgcaaatttgcata 200  Q
    |||||||||||||||||||  ||| |||||||||| |||| ||| || ||||||  ||||  ||||||||||||||| ||||| | |||||||||||| |    
T  8770996 caacaattatttattaaaag-ttacatatttaatataaaaaacaaaaatttcaagtcaaaattactactttaaacttcttaacatgtgcaaatttgcaca 8770898  T
Q  201 tgatagaaaaa 211  Q
    ||||| |||||    
T  8770897 tgataaaaaaa 8770887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 101 - 195
Target Start/End: Complemental strand, 37471851 - 37471757
Alignment:
Q  101 caacaattatttattaaaaaattatatatttaatagaaaatacacaagtttcaatacaaacatactactttaaacttattaacgtatgcaaattt 195  Q
    ||||||| ||||||||||||| || |||||||||| |||||  ||||||||||| |||||  ||||| ||||||||| ||||| | |||||||||    
T  37471851 caacaataatttattaaaaaactacatatttaatataaaatgaacaagtttcaagacaaagttactattttaaacttcttaacatgtgcaaattt 37471757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 101 - 210
Target Start/End: Original strand, 14377492 - 14377600
Alignment:
Q  101 caacaattatttattaaaaaattatatatttaatagaaaatacacaagtttcaatacaaacatactactttaaacttattaacgtatgcaaatttgcata 200  Q
    |||||||||||| ||||||  ||| |||||||||| |||| |||||||||||||  ||||  ||||||||||||||| ||| | | | |||||||||| |    
T  14377492 caacaattatttgttaaaag-ttacatatttaatataaaaaacacaagtttcaagtcaaagttactactttaaacttcttatcatgtacaaatttgcaca 14377590  T
Q  201 tgatagaaaa 210  Q
    ||||||||||    
T  14377591 tgatagaaaa 14377600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 107 - 212
Target Start/End: Original strand, 15231904 - 15232009
Alignment:
Q  107 ttatttattaaaaaattatatatttaatagaaaatacacaagtttcaatacaaacatactactttaaacttattaacgtatgcaaatttgcatatgatag 206  Q
    |||||||||||||| ||| ||||||||||  |||| ||||||||| ||  ||||  ||| ||||||||||| ||||| | |||||||||||| || ||||    
T  15231904 ttatttattaaaaagttacatatttaatatgaaatgcacaagttttaagtcaaagttaccactttaaacttcttaacatgtgcaaatttgcacataatag 15232003  T
Q  207 aaaaac 212  Q
    ||||||    
T  15232004 aaaaac 15232009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 101 - 213
Target Start/End: Complemental strand, 5583669 - 5583557
Alignment:
Q  101 caacaattatttattaaaaaattatatatttaatagaaaatacacaagtttcaatacaaacatactactttaaacttattaacgtatgcaaatttgcata 200  Q
    |||||||||||||  ||||| |||||||||||||| |||||   |||||| |||| ||||  ||||| |||||| || ||||| | |||||||||||  |    
T  5583669 caacaattatttaacaaaaagttatatatttaatacaaaatgttcaagttccaatgcaaagttactattttaaatttcttaacatgtgcaaatttgcgca 5583570  T
Q  201 tgatagaaaaacc 213  Q
    |||||||||||||    
T  5583569 tgatagaaaaacc 5583557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 101 - 213
Target Start/End: Complemental strand, 7757897 - 7757785
Alignment:
Q  101 caacaattatttattaaaaaattatatatttaatagaaaatacacaagtttcaatacaaacatactactttaaacttattaacgtatgcaaatttgcata 200  Q
    |||||||||||||  ||||| |||||||||||||| |||||   |||||| |||| ||||  ||||| |||||| || ||||| | || ||||||||| |    
T  7757897 caacaattatttaacaaaaagttatatatttaatacaaaatgttcaagttccaatgcaaagttactattttaaatttcttaacatgtgtaaatttgcaca 7757798  T
Q  201 tgatagaaaaacc 213  Q
    |||||||||||||    
T  7757797 tgatagaaaaacc 7757785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 101 - 212
Target Start/End: Complemental strand, 5853574 - 5853463
Alignment:
Q  101 caacaattatttattaaaaaattatatatttaatagaaaatacacaagtttcaatacaaacatactactttaaacttattaacgtatgcaaatttgcata 200  Q
    ||||||||||||||| |||||||||||||||| || |||||  | || ||||||| ||||  | | | | ||||||| ||||| | |||||||||||| |    
T  5853574 caacaattatttatttaaaaattatatatttattacaaaatgtataaatttcaatgcaaaatttcaattataaacttcttaacatgtgcaaatttgcaca 5853475  T
Q  201 tgatagaaaaac 212  Q
    ||||||||||||    
T  5853474 tgatagaaaaac 5853463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 101 - 212
Target Start/End: Complemental strand, 16493643 - 16493532
Alignment:
Q  101 caacaattatttattaaaaaattatatatttaatagaaaatacacaagtttcaatacaaacatactactttaaacttattaacgtatgcaaatttgcata 200  Q
    ||||||||||||||| |||||||||||||||| || |||||  | || ||||||| ||||  | | | | ||||||| ||||| | |||||||||||| |    
T  16493643 caacaattatttatttaaaaattatatatttattacaaaatgtataaatttcaatgcaaaatttcaattataaacttcttaacatgtgcaaatttgcaca 16493544  T
Q  201 tgatagaaaaac 212  Q
    ||||||||||||    
T  16493543 tgatagaaaaac 16493532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 105 - 212
Target Start/End: Original strand, 45062269 - 45062376
Alignment:
Q  105 aattatttattaaaaaattatatatttaatagaaaatacacaagtttcaatacaaacatactactttaaacttattaacgtatgcaaatttgcatatgat 204  Q
    |||||||||||||||| ||| || ||||||| ||||| |||||||| ||| | |||  ||||| ||| ||||| ||||  | |||||||||||| |||||    
T  45062269 aattatttattaaaaagttacatgtttaatataaaatgcacaagttccaaaataaagttactattttgaacttcttaatatgtgcaaatttgcacatgat 45062368  T
Q  205 agaaaaac 212  Q
    ||||||||    
T  45062369 agaaaaac 45062376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 111 - 213
Target Start/End: Complemental strand, 4576427 - 4576325
Alignment:
Q  111 ttattaaaaaattatatatttaatagaaaatacacaagtttcaatacaaacatactactttaaacttattaacgtatgcaaatttgcatatgatagaaaa 210  Q
    ||||| |||| || |||||||||||  ||||  |||||||||||||||||  | ||| |||||| || ||||| ||||| |||||||| |||||||||||    
T  4576427 ttatttaaaagttttatatttaatattaaatgtacaagtttcaatacaaaatttctattttaaatttcttaacatatgcgaatttgcacatgatagaaaa 4576328  T
Q  211 acc 213  Q
    |||    
T  4576327 acc 4576325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 123 - 213
Target Start/End: Complemental strand, 29157918 - 29157828
Alignment:
Q  123 tatatatttaatagaaaatacacaagtttcaatacaaacatactactttaaacttattaacgtatgcaaatttgcatatgatagaaaaacc 213  Q
    ||||||||||||| |||||| ||||||| |||| ||||  ||||| || ||| || ||||| | |||||||||||| ||||||||||||||    
T  29157918 tatatatttaatacaaaatatacaagttccaatgcaaagttactatttaaaatttcttaacatgtgcaaatttgcacatgatagaaaaacc 29157828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 101 - 166
Target Start/End: Original strand, 34817610 - 34817676
Alignment:
Q  101 caacaattatttattaaaaaattatatatttaatagaaaata-cacaagtttcaatacaaacatact 166  Q
    |||||||||||||||||||| |||||||||||||| |||| | |||||||| |||||| ||||||||    
T  34817610 caacaattatttattaaaaagttatatatttaataaaaaaaagcacaagttccaataccaacatact 34817676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 101 - 195
Target Start/End: Complemental strand, 40562188 - 40562094
Alignment:
Q  101 caacaattatttattaaaaaattatatatttaatagaaaatacacaagtttcaatacaaacatactactttaaacttattaacgtatgcaaattt 195  Q
    |||||||||||||||||| | ||||||||| |||| |||||| | |||||||||| ||||  || || ||||||||| ||||| | |||||||||    
T  40562188 caacaattatttattaaagagttatatattaaatacaaaatataaaagtttcaatgcaaagttaatattttaaactttttaacatgtgcaaattt 40562094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 102 - 183
Target Start/End: Complemental strand, 11661029 - 11660948
Alignment:
Q  102 aacaattatttattaaaaaattatatatttaatagaaaatacacaagtttcaatacaaacatactactttaaacttattaac 183  Q
    ||||||||||||||||||| ||||| |||||||| |||||| ||||||| |||| ||||  ||||| || |||||| |||||    
T  11661029 aacaattatttattaaaaagttatacatttaatacaaaatatacaagttccaatgcaaagttactatttaaaacttcttaac 11660948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 123 - 211
Target Start/End: Original strand, 3951339 - 3951427
Alignment:
Q  123 tatatatttaatagaaaatacacaagtttcaatacaaacatactactttaaacttattaacgtatgcaaatttgcatatgatagaaaaa 211  Q
    ||||||||||||  |||||||||||||||||||| |||| ||||||||||   |  ||||| | |||||||||||| ||| ||||||||    
T  3951339 tatatatttaatgtaaaatacacaagtttcaatataaacttactactttagtatccttaacatgtgcaaatttgcacatgttagaaaaa 3951427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 123 - 211
Target Start/End: Original strand, 8847876 - 8847964
Alignment:
Q  123 tatatatttaatagaaaatacacaagtttcaatacaaacatactactttaaacttattaacgtatgcaaatttgcatatgatagaaaaa 211  Q
    ||||||||||||  |||||||||||||||||||| |||| ||||||||||   |  ||||| | |||||||||||| ||| ||||||||    
T  8847876 tatatatttaatgtaaaatacacaagtttcaatataaacttactactttagtatccttaacatgtgcaaatttgcacatgttagaaaaa 8847964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 101 - 213
Target Start/End: Original strand, 9747384 - 9747496
Alignment:
Q  101 caacaattatttattaaaaaattatatatttaatagaaaatacacaagtttcaatacaaacatactactttaaacttattaacgtatgcaaatttgcata 200  Q
    |||||| ||||| | |||||  || |||||||||| |||||  ||||||| ||| |||||  ||||| ||||||||| ||||| | || ||||||||| |    
T  9747384 caacaactatttgtaaaaaagctacatatttaatataaaatgaacaagttccaagacaaaattactattttaaacttcttaacatgtgaaaatttgcaca 9747483  T
Q  201 tgatagaaaaacc 213  Q
    |||||||||||||    
T  9747484 tgatagaaaaacc 9747496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 101 - 213
Target Start/End: Original strand, 12016734 - 12016845
Alignment:
Q  101 caacaattatttattaaaaaattatatatttaatagaaaatacacaagtttcaatacaaacatactactttaaacttattaacgtatgcaaatttgcata 200  Q
    ||||||||||| |||||||  | | |||||||||| |||| ||||||||| |||   |||  ||||||||||||||| ||||  | |||||||||||| |    
T  12016734 caacaattattgattaaaagct-acatatttaatataaaaaacacaagttccaagttaaaattactactttaaacttcttaatatgtgcaaatttgcaca 12016832  T
Q  201 tgatagaaaaacc 213  Q
    |||||||||||||    
T  12016833 tgatagaaaaacc 12016845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 104 - 211
Target Start/End: Complemental strand, 12919458 - 12919351
Alignment:
Q  104 caattatttattaaaaaattatatatttaatagaaaatacacaagtttcaatacaaacatactactttaaacttattaacgtatgcaaatttgcatatga 203  Q
    |||| ||||||||||||| || |||||||||| |||||  ||||||||||| | |||  ||||| |||||| || ||||| | || ||||||||| ||||    
T  12919458 caataatttattaaaaaactacatatttaatataaaatgaacaagtttcaagataaagttactattttaaattttttaacatgtgtaaatttgcacatga 12919359  T
Q  204 tagaaaaa 211  Q
    || |||||    
T  12919358 taaaaaaa 12919351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 101 - 212
Target Start/End: Original strand, 22704604 - 22704715
Alignment:
Q  101 caacaattatttattaaaaaattatatatttaatagaaaatacacaagtttcaatacaaacatactactttaaacttattaacgtatgcaaatttgcata 200  Q
    ||||||||||||||| |||||||||||||||| || |||||  | || ||||||| ||||  | | | | ||||||| ||||  | |||||||||||| |    
T  22704604 caacaattatttatttaaaaattatatatttattacaaaatgtataaatttcaatgcaaaatttcaattataaacttcttaagatgtgcaaatttgcaca 22704703  T
Q  201 tgatagaaaaac 212  Q
    ||||||||||||    
T  22704704 tgatagaaaaac 22704715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 108 - 183
Target Start/End: Complemental strand, 39607512 - 39607437
Alignment:
Q  108 tatttattaaaaaattatatatttaatagaaaatacacaagtttcaatacaaacatactactttaaacttattaac 183  Q
    ||||||||||||||||||||||||||||  ||||||| || || |||||||||| || || |||||| || |||||    
T  39607512 tatttattaaaaaattatatatttaatatgaaatacataacttccaatacaaacttattattttaaatttcttaac 39607437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 116 - 211
Target Start/End: Complemental strand, 43941950 - 43941855
Alignment:
Q  116 aaaaaattatatatttaatagaaaatacacaagtttcaatacaaacatactactttaaacttattaacgtatgcaaatttgcatatgatagaaaaa 211  Q
    |||||| ||||||||||||  |||||||||||||| ||||| |||| ||||||||||   |  ||||| | |||||||||||| ||| ||||||||    
T  43941950 aaaaaaatatatatttaatgtaaaatacacaagttccaatataaacttactactttagtatccttaacatgtgcaaatttgcacatgttagaaaaa 43941855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 105 - 167
Target Start/End: Original strand, 45302411 - 45302473
Alignment:
Q  105 aattatttattaaaaaattatatatttaatagaaaatacacaagtttcaatacaaacatacta 167  Q
    ||||||||||||||||||||||||||||||| ||||| || || ||  ||||||||| |||||    
T  45302411 aattatttattaaaaaattatatatttaatataaaatgcataaattctaatacaaacttacta 45302473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 102 - 183
Target Start/End: Complemental strand, 2580068 - 2579987
Alignment:
Q  102 aacaattatttattaaaaaattatatatttaatagaaaatacacaagtttcaatacaaacatactactttaaacttattaac 183  Q
    ||||||||||| ||||||||||  |||||||| | |||||| ||||  |||||||||||| ||||| ||| ||||| |||||    
T  2580068 aacaattatttgttaaaaaattcaatatttaacataaaatatacaaaattcaatacaaacttactagtttgaacttcttaac 2579987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 123 - 211
Target Start/End: Original strand, 3286584 - 3286672
Alignment:
Q  123 tatatatttaatagaaaatacacaagtttcaatacaaacatactactttaaacttattaacgtatgcaaatttgcatatgatagaaaaa 211  Q
    ||||||||||||  |||||||||||||| ||||| |||| ||||||||||   |  ||||| | |||||||||||| ||| ||||||||    
T  3286584 tatatatttaatgtaaaatacacaagttccaatataaacttactactttagtatccttaacatgtgcaaatttgcacatgttagaaaaa 3286672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 102 - 159
Target Start/End: Complemental strand, 25068588 - 25068527
Alignment:
Q  102 aacaattatttattaaaaaattatata----tttaatagaaaatacacaagtttcaatacaa 159  Q
    |||||||||||||||||||||||||||    ||||||| ||||||||||| ||| |||||||    
T  25068588 aacaattatttattaaaaaattatatatttatttaatataaaatacacaaattttaatacaa 25068527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 101 - 213
Target Start/End: Original strand, 29142141 - 29142253
Alignment:
Q  101 caacaattatttattaaaaaattatatatttaatagaaaatacacaagtttcaatacaaacatactactttaaacttattaacgtatgcaaatttgcata 200  Q
    ||||||||| ||||| ||||||| |||||||||||  ||||  |||||||  ||||||||  | |||  |||||||| | ||| | || ||||||||| |    
T  29142141 caacaattacttattcaaaaattttatatttaatattaaatgtacaagttaaaatacaaaatttctatattaaacttctaaacatgtgtaaatttgcaca 29142240  T
Q  201 tgatagaaaaacc 213  Q
    |||||||||||||    
T  29142241 tgatagaaaaacc 29142253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 101 - 153
Target Start/End: Complemental strand, 29981334 - 29981282
Alignment:
Q  101 caacaattatttattaaaaaattatatatttaatagaaaatacacaagtttca 153  Q
    ||||||||||||||||||||  || ||||||||||  ||||||||||||||||    
T  29981334 caacaattatttattaaaaatatacatatttaatattaaatacacaagtttca 29981282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 129 - 212
Target Start/End: Original strand, 9895107 - 9895190
Alignment:
Q  129 tttaatagaaaatacacaagtttcaatacaaacatactactttaaacttattaacgtatgcaaatttgcatatgatagaaaaac 212  Q
    ||||||| ||||| || || |||||||| |||  || || ||||||||| ||||| | || |||||||||||||||||||||||    
T  9895107 tttaatataaaatgcataaatttcaatataaatttattattttaaacttcttaacatttgaaaatttgcatatgatagaaaaac 9895190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 127 - 210
Target Start/End: Complemental strand, 26003431 - 26003348
Alignment:
Q  127 tatttaatagaaaatacacaagtttcaatacaaacatactactttaaacttattaacgtatgcaaatttgcatatgatagaaaa 210  Q
    |||||||||  ||||  |||| ||||||||||||  | ||| ||||||||| ||||| | |||||||||||| |||||||||||    
T  26003431 tatttaatatcaaatgtacaaatttcaatacaaaatttctattttaaacttcttaacatgtgcaaatttgcacatgatagaaaa 26003348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 138 - 213
Target Start/End: Complemental strand, 43388555 - 43388480
Alignment:
Q  138 aaatacacaagtttcaatacaaacatactactttaaacttattaacgtatgcaaatttgcatatgatagaaaaacc 213  Q
    |||| |||||||| |||| |||||||||   ||| ||||| ||||| | |||||||||||| ||||||||||||||    
T  43388555 aaatgcacaagttccaatgcaaacatacctttttgaacttcttaacatgtgcaaatttgcacatgatagaaaaacc 43388480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 101 - 155
Target Start/End: Original strand, 2051681 - 2051735
Alignment:
Q  101 caacaattatttattaaaaaattatatatttaatagaaaatacacaagtttcaat 155  Q
    |||||||||||||||||||| ||| |||||||||| |||||| | |||| |||||    
T  2051681 caacaattatttattaaaaatttaaatatttaatataaaatatataagtatcaat 2051735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 101 - 210
Target Start/End: Complemental strand, 2060153 - 2060044
Alignment:
Q  101 caacaattatttattaaaaaattatatatttaatagaaaatacacaagtttcaatacaaacatactactttaaacttattaacgtatgcaaatttgcata 200  Q
    |||||||||||||||||| |  || |||||||||| |||| |||||| || |||   |||  |||||||||||| || ||||| | || ||||||||| |    
T  2060153 caacaattatttattaaagagctacatatttaatataaaagacacaaattccaagttaaagttactactttaaatttcttaacatgtgtaaatttgcaca 2060054  T
Q  201 tgatagaaaa 210  Q
    | ||||||||    
T  2060053 tcatagaaaa 2060044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 168 - 213
Target Start/End: Original strand, 6109523 - 6109568
Alignment:
Q  168 ctttaaacttattaacgtatgcaaatttgcatatgatagaaaaacc 213  Q
    |||||||||| ||||| | |||||||||||| ||||||||||||||    
T  6109523 ctttaaacttcttaacatgtgcaaatttgcacatgatagaaaaacc 6109568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 126 - 211
Target Start/End: Original strand, 16123370 - 16123455
Alignment:
Q  126 atatttaatagaaaatacacaagtttcaatacaaacatactactttaaacttattaacgtatgcaaatttgcatatgatagaaaaa 211  Q
    |||||||||| |||| ||||||||| | |  ||||  ||||| ||||||||| ||| | | |||||||||||| ||||||||||||    
T  16123370 atatttaatataaaaaacacaagttcctaatcaaaattactaatttaaacttcttatcatgtgcaaatttgcacatgatagaaaaa 16123455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 101 - 198
Target Start/End: Original strand, 22705522 - 22705618
Alignment:
Q  101 caacaattatttattaaaaaattatatatttaatagaaaatacacaagtttcaatacaaacatactactttaaacttattaacgtatgcaaatttgca 198  Q
    ||||||||||| ||| |||  ||| |||||||||| |||| |||||||||||||   |||  ||||||||||||||| ||||  | ||||||||||||    
T  22705522 caacaattattaatttaaag-ttacatatttaatataaaaaacacaagtttcaagttaaaattactactttaaacttcttaaaatgtgcaaatttgca 22705618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 116 - 213
Target Start/End: Original strand, 36731262 - 36731359
Alignment:
Q  116 aaaaaattatatatttaatagaaaatacacaagtttcaatacaaacatactactttaaacttattaacgtatgcaaatttgcatatgatagaaaaacc 213  Q
    |||||||||| ||||||||| | ||||||||||||  || |||||  ||| | |||||| || ||||| | || |||||| || ||||||||||||||    
T  36731262 aaaaaattatctatttaatatagaatacacaagttctaagacaaatttaccattttaaatttcttaacatgtgtaaatttacacatgatagaaaaacc 36731359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 169 - 213
Target Start/End: Original strand, 8065258 - 8065302
Alignment:
Q  169 tttaaacttattaacgtatgcaaatttgcatatgatagaaaaacc 213  Q
    ||||||||| ||||| | |||||||||||| ||||||||||||||    
T  8065258 tttaaacttcttaacatgtgcaaatttgcacatgatagaaaaacc 8065302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 101 - 197
Target Start/End: Complemental strand, 13351321 - 13351226
Alignment:
Q  101 caacaattatttattaaaaaattatatatttaatagaaaatacacaagtttcaatacaaacatactactttaaacttattaacgtatgcaaatttgc 197  Q
    ||||||||||| |||||||  ||| ||||| |||| |||| |||||||||  ||  ||||  ||||||||||||||| ||||| | |||||||||||    
T  13351321 caacaattattaattaaaag-ttacatattaaatataaaaaacacaagttctaagtcaaagttactactttaaacttcttaacatgtgcaaatttgc 13351226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 101 - 141
Target Start/End: Original strand, 25948106 - 25948146
Alignment:
Q  101 caacaattatttattaaaaaattatatatttaatagaaaat 141  Q
    ||||||||||||||| |||||||||||||||| || |||||    
T  25948106 caacaattatttatttaaaaattatatatttattacaaaat 25948146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0073 (Bit Score: 65; Significance: 1e-28; HSPs: 1)
Name: scaffold0073
Description:

Target: scaffold0073; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 101 - 213
Target Start/End: Complemental strand, 16645 - 16534
Alignment:
Q  101 caacaattatttattaaaaaattatatatttaatagaaaatacacaagtttcaatacaaacatactactttaaacttattaacgtatgcaaatttgcata 200  Q
    |||||||||||||||||||| ||||||||| ||||||||||||||||||| |||  |||||||| |||||||||||| ||||| | |||||||||||| |    
T  16645 caacaattatttattaaaaatttatatatt-aatagaaaatacacaagttccaaatcaaacatattactttaaacttcttaacatgtgcaaatttgcaca 16547  T
Q  201 tgatagaaaaacc 213  Q
    ||||| |||||||    
T  16546 tgatataaaaacc 16534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 65; Significance: 1e-28; HSPs: 49)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 101 - 213
Target Start/End: Complemental strand, 7040362 - 7040251
Alignment:
Q  101 caacaattatttattaaaaaattatatatttaatagaaaatacacaagtttcaatacaaacatactactttaaacttattaacgtatgcaaatttgcata 200  Q
    |||||||||||||||||||| ||||||||| ||||||||||||||||||| |||  |||||||| |||||||||||| ||||| | |||||||||||| |    
T  7040362 caacaattatttattaaaaatttatatatt-aatagaaaatacacaagttccaaatcaaacatagtactttaaacttcttaacatgtgcaaatttgcaca 7040264  T
Q  201 tgatagaaaaacc 213  Q
    ||||| |||||||    
T  7040263 tgatataaaaacc 7040251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 101 - 213
Target Start/End: Complemental strand, 23982866 - 23982754
Alignment:
Q  101 caacaattatttattaaaaaattatatatttaatagaaaatacacaagtttcaatacaaacatactactttaaacttattaacgtatgcaaatttgcata 200  Q
    ||||||||| |||||||||| ||| |||||||||| |||||||||||||| |||  ||||  |||||||||||| || ||||||| |||||||||||| |    
T  23982866 caacaattaattattaaaaacttaaatatttaatataaaatacacaagttccaagtcaaagttactactttaaatttcttaacgtgtgcaaatttgcaca 23982767  T
Q  201 tgatagaaaaacc 213  Q
    |||||||||||||    
T  23982766 tgatagaaaaacc 23982754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 101 - 213
Target Start/End: Original strand, 19889408 - 19889519
Alignment:
Q  101 caacaattatttattaaaaaattatatatttaatagaaaatacacaagtttcaatacaaacatactactttaaacttattaacgtatgcaaatttgcata 200  Q
    |||||||||||||||||||  ||| |||||||||| |||| ||||||||| |||  ||||  ||||||||||||||| ||| | | |||||||||||| |    
T  19889408 caacaattatttattaaaag-ttacatatttaatataaaaaacacaagttccaagtcaaagttactactttaaacttcttatcatgtgcaaatttgcaca 19889506  T
Q  201 tgatagaaaaacc 213  Q
    |||||||||||||    
T  19889507 tgatagaaaaacc 19889519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 101 - 213
Target Start/End: Original strand, 33343055 - 33343167
Alignment:
Q  101 caacaattatttattaaaaaattatatatttaatagaaaatacacaagtttcaatacaaacatactactttaaacttattaacgtatgcaaatttgcata 200  Q
    |||||||||||||  ||||| |||||||||||||| |||||   |||||| |||||||||  ||||| |||||| || ||||| | |||||||||||| |    
T  33343055 caacaattatttaacaaaaagttatatatttaatacaaaatgttcaagttccaatacaaagttactattttaaatttcttaacatgtgcaaatttgcaca 33343154  T
Q  201 tgatagaaaaacc 213  Q
    |||||||||||||    
T  33343155 tgatagaaaaacc 33343167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 101 - 211
Target Start/End: Complemental strand, 3530225 - 3530115
Alignment:
Q  101 caacaattatttattaaaaaattatatatttaatagaaaatacacaagtttcaatacaaacatactactttaaacttattaacgtatgcaaatttgcata 200  Q
    ||||||||||||||||||||||||||||||| ||| ||||| ||||| |||||||| |||| ||||| | ||||| | ||||  | || ||||||||| |    
T  3530225 caacaattatttattaaaaaattatatatttgatataaaatgcacaaatttcaataaaaacttactattctaaacgtcttaatatgtgtaaatttgcaca 3530126  T
Q  201 tgatagaaaaa 211  Q
    ||||| |||||    
T  3530125 tgatataaaaa 3530115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 101 - 195
Target Start/End: Complemental strand, 47707995 - 47707901
Alignment:
Q  101 caacaattatttattaaaaaattatatatttaatagaaaatacacaagtttcaatacaaacatactactttaaacttattaacgtatgcaaattt 195  Q
    |||||||||||||||||||| |||||||||||||| |||||  | |||||||||| ||||  ||||| ||||||||| ||||| |||| ||||||    
T  47707995 caacaattatttattaaaaagttatatatttaatacaaaatgtataagtttcaattcaaaattactattttaaacttcttaacatatgaaaattt 47707901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 111 - 212
Target Start/End: Original strand, 26300648 - 26300749
Alignment:
Q  111 ttattaaaaaattatatatttaatagaaaatacacaagtttcaatacaaacatactactttaaacttattaacgtatgcaaatttgcatatgatagaaaa 210  Q
    |||||||||| ||||| |||||||| |||||| |||||||||||| ||||  ||||| ||||||||| ||||| | |||||||||| | ||||| |||||    
T  26300648 ttattaaaaagttatacatttaatacaaaatatacaagtttcaattcaaagttactattttaaactttttaacatgtgcaaatttgtacatgatggaaaa 26300747  T
Q  211 ac 212  Q
    ||    
T  26300748 ac 26300749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 105 - 213
Target Start/End: Original strand, 4969844 - 4969952
Alignment:
Q  105 aattatttattaaaaaattatatatttaatagaaaatacacaagtttcaatacaaacatactactttaaacttattaacgtatgcaaatttgcatatgat 204  Q
    ||||||||||| |||| || |||||||||||  ||||  ||||||| |||||||||  | ||| ||||||||| ||||| | |||||||||||| |||||    
T  4969844 aattatttatttaaaagttttatatttaatattaaatgtacaagttccaatacaaaatttctattttaaacttcttaacatgtgcaaatttgcacatgat 4969943  T
Q  205 agaaaaacc 213  Q
    |||||||||    
T  4969944 agaaaaacc 4969952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 101 - 213
Target Start/End: Complemental strand, 5909392 - 5909281
Alignment:
Q  101 caacaattatttattaaaaaattatatatttaatagaaaatacacaagtttcaatacaaacatactactttaaacttattaacgtatgcaaatttgcata 200  Q
    |||||||||||||||||||  | | |||||||||| |||| |||||||||||||  ||||  ||||||||||||||| ||| | | ||||||||| || |    
T  5909392 caacaattatttattaaaagct-acatatttaatataaaaaacacaagtttcaagtcaaagttactactttaaacttcttatcatgtgcaaatttacaca 5909294  T
Q  201 tgatagaaaaacc 213  Q
    |||||||||||||    
T  5909293 tgatagaaaaacc 5909281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 101 - 213
Target Start/End: Original strand, 7170069 - 7170181
Alignment:
Q  101 caacaattatttattaaaaaattatatatttaatagaaaatacacaagtttcaatacaaacatactactttaaacttattaacgtatgcaaatttgcata 200  Q
    ||||||||| ||||||||||  || ||| |||||| ||||| |||||||| |||  ||||  ||||||||||||||| ||| | | |||||||||||| |    
T  7170069 caacaattaattattaaaaatctacataattaatataaaatgcacaagttccaagtcaaagttactactttaaacttcttatcatgtgcaaatttgcaca 7170168  T
Q  201 tgatagaaaaacc 213  Q
    |||||||||||||    
T  7170169 tgatagaaaaacc 7170181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 105 - 213
Target Start/End: Complemental strand, 8091419 - 8091311
Alignment:
Q  105 aattatttattaaaaaattatatatttaatagaaaatacacaagtttcaatacaaacatactactttaaacttattaacgtatgcaaatttgcatatgat 204  Q
    |||||||||||||||| |||||||||||| | |||||  | ||||| |||| ||||  ||||| ||||||||| ||||| | || ||||||||| |||||    
T  8091419 aattatttattaaaaagttatatatttaacacaaaatgtaaaagttacaatgcaaagttactattttaaacttcttaacatgtgtaaatttgcacatgat 8091320  T
Q  205 agaaaaacc 213  Q
    |||||||||    
T  8091319 agaaaaacc 8091311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 101 - 213
Target Start/End: Original strand, 9332029 - 9332140
Alignment:
Q  101 caacaattatttattaaaaaattatatatttaatagaaaatacacaagtttcaatacaaacatactactttaaacttattaacgtatgcaaatttgcata 200  Q
    ||||||||||| ||||||   ||| |||||||||| |||| |||||||||||||  ||||  ||||| ||||||||| ||||| | |||||||||||| |    
T  9332029 caacaattattgattaaatg-ttacatatttaatataaaaaacacaagtttcaagtcaaagttactaatttaaacttcttaacatgtgcaaatttgcaca 9332127  T
Q  201 tgatagaaaaacc 213  Q
    |||||||||||||    
T  9332128 tgatagaaaaacc 9332140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 101 - 213
Target Start/End: Original strand, 34270328 - 34270440
Alignment:
Q  101 caacaattatttattaaaaaattatatatttaatagaaaatacacaagtttcaatacaaacatactactttaaacttattaacgtatgcaaatttgcata 200  Q
    |||||||||||||  ||||| |||||||||||||| |||||   |||||| |||| ||||  ||||| |||||| || ||||| | |||||||||||| |    
T  34270328 caacaattatttaacaaaaagttatatatttaatacaaaatgttcaagttccaatgcaaagttactattttaaatttcttaacatgtgcaaatttgcaca 34270427  T
Q  201 tgatagaaaaacc 213  Q
    |||||||||||||    
T  34270428 tgatagaaaaacc 34270440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 101 - 213
Target Start/End: Original strand, 46290077 - 46290189
Alignment:
Q  101 caacaattatttattaaaaaattatatatttaatagaaaatacacaagtttcaatacaaacatactactttaaacttattaacgtatgcaaatttgcata 200  Q
    |||||||||||||  ||||| |||||||||||||| |||||   |||||| |||| ||||  ||||| |||||| || ||||| | |||||||||||| |    
T  46290077 caacaattatttaacaaaaagttatatatttaatacaaaatgttcaagttccaatgcaaagttactattttaaatttcttaacatgtgcaaatttgcaca 46290176  T
Q  201 tgatagaaaaacc 213  Q
    |||||||||||||    
T  46290177 tgatagaaaaacc 46290189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 104 - 211
Target Start/End: Complemental strand, 7899594 - 7899487
Alignment:
Q  104 caattatttattaaaaaattatatatttaatagaaaatacacaagtttcaatacaaacatactactttaaacttattaacgtatgcaaatttgcatatga 203  Q
    |||| |||||||||||  |||||||||||||| |||||| |||||||  || |||||| ||| | |||||| || ||||| | |||||||||||| ||||    
T  7899594 caataatttattaaaatgttatatatttaatataaaatatacaagttataagacaaacttaccattttaaattttttaacatgtgcaaatttgcacatga 7899495  T
Q  204 tagaaaaa 211  Q
    ||||||||    
T  7899494 tagaaaaa 7899487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 101 - 212
Target Start/End: Complemental strand, 25709510 - 25709399
Alignment:
Q  101 caacaattatttattaaaaaattatatatttaatagaaaatacacaagtttcaatacaaacatactactttaaacttattaacgtatgcaaatttgcata 200  Q
    ||||||| ||||||||||||  ||  |||||||||  ||||  ||||||| |||||||||  ||||| ||||||||| ||||| | |||||||||||| |    
T  25709510 caacaataatttattaaaaagctacctatttaatatgaaatgaacaagttccaatacaaagttactattttaaacttcttaacatgtgcaaatttgcaca 25709411  T
Q  201 tgatagaaaaac 212  Q
    ||||||||||||    
T  25709410 tgatagaaaaac 25709399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 111 - 213
Target Start/End: Original strand, 32117891 - 32117993
Alignment:
Q  111 ttattaaaaaattatatatttaatagaaaatacacaagtttcaatacaaacatactactttaaacttattaacgtatgcaaatttgcatatgatagaaaa 210  Q
    |||||||||| |||| ||||||||| | |||| ||||||||||| | |||| | | |||||||| || ||||| | |||||||||||| |||||||||||    
T  32117891 ttattaaaaagttatctatttaatatagaatatacaagtttcaagataaacttgccactttaaatttcttaacatgtgcaaatttgcacatgatagaaaa 32117990  T
Q  211 acc 213  Q
    |||    
T  32117991 acc 32117993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 104 - 165
Target Start/End: Original strand, 2276745 - 2276806
Alignment:
Q  104 caattatttattaaaaaattatatatttaatagaaaatacacaagtttcaatacaaacatac 165  Q
    ||||||||||||||||| |||| ||||||||| |||||||||||||||||| |||| |||||    
T  2276745 caattatttattaaaaagttatctatttaatataaaatacacaagtttcaacacaagcatac 2276806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 104 - 161
Target Start/End: Original strand, 19868184 - 19868241
Alignment:
Q  104 caattatttattaaaaaattatatatttaatagaaaatacacaagtttcaatacaaac 161  Q
    ||||||||||| ||||| |||||||||||||| |||||||||||||||||| ||||||    
T  19868184 caattatttatcaaaaagttatatatttaatataaaatacacaagtttcaagacaaac 19868241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 102 - 171
Target Start/End: Complemental strand, 36991110 - 36991041
Alignment:
Q  102 aacaattatttattaaaaaattatatatttaatagaaaatacacaagtttcaatacaaacatactacttt 171  Q
    ||||| ||||||||||||| | ||||||||||||||||||||||||||||   |||||| ||||||||||    
T  36991110 aacaactatttattaaaaagtcatatatttaatagaaaatacacaagttttgctacaaatatactacttt 36991041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 101 - 213
Target Start/End: Complemental strand, 12086041 - 12085930
Alignment:
Q  101 caacaattatttattaaaaaattatatatttaatagaaaatacacaagtttcaatacaaacatactactttaaacttattaacgtatgcaaatttgcata 200  Q
    |||||||||||||||||||  ||| |||||||||| |||| |||||||||||||  ||||  ||||  ||||||||| |||   | |||||||||||| |    
T  12086041 caacaattatttattaaaag-ttaaatatttaatataaaaaacacaagtttcaagtcaaaattacttatttaaacttcttattatgtgcaaatttgcaca 12085943  T
Q  201 tgatagaaaaacc 213  Q
    |||||||||||||    
T  12085942 tgatagaaaaacc 12085930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 104 - 196
Target Start/End: Original strand, 12624707 - 12624798
Alignment:
Q  104 caattatttattaaaaaattatatatttaatagaaaatacacaagtttcaatacaaacatactactttaaacttattaacgtatgcaaatttg 196  Q
    ||||||||||||||||| || ||||||||||| ||||||||||||||| || |||||| ||| | |||||| || ||||| | ||||||||||    
T  12624707 caattatttattaaaaacttgtatatttaatataaaatacacaagttt-aagacaaacttaccattttaaatttcttaacatgtgcaaatttg 12624798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 105 - 161
Target Start/End: Original strand, 47200984 - 47201039
Alignment:
Q  105 aattatttattaaaaaattatatatttaatagaaaatacacaagtttcaatacaaac 161  Q
    ||||||||||||||| ||||||||||||||| ||||||||||| |||||||||||||    
T  47200984 aattatttattaaaagattatatatttaatataaaatacacaa-tttcaatacaaac 47201039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 126 - 213
Target Start/End: Complemental strand, 3561964 - 3561877
Alignment:
Q  126 atatttaatagaaaatacacaagtttcaatacaaacatactactttaaacttattaacgtatgcaaatttgcatatgatagaaaaacc 213  Q
    |||||||||| |||| |||||||||| ||   |||  ||||||||||||||| ||||| | |||||||||||| ||||||||||||||    
T  3561964 atatttaatataaaaaacacaagttttaagttaaagttactactttaaacttcttaacatgtgcaaatttgcacatgatagaaaaacc 3561877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 163 - 210
Target Start/End: Original strand, 42750412 - 42750459
Alignment:
Q  163 tactactttaaacttattaacgtatgcaaatttgcatatgatagaaaa 210  Q
    ||||||||||||||| ||||| ||||||||||||||||||||||||||    
T  42750412 tactactttaaacttcttaacatatgcaaatttgcatatgatagaaaa 42750459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 101 - 212
Target Start/End: Original strand, 45501526 - 45501637
Alignment:
Q  101 caacaattatttattaaaaaattatatatttaatagaaaatacacaagtttcaatacaaacatactactttaaacttattaacgtatgcaaatttgcata 200  Q
    ||||||||||||||| || | || |||||||||||  ||||  ||||||| |||||||||  | ||| ||||||||| ||||  | |||||||||||| |    
T  45501526 caacaattatttattcaacagttttatatttaatattaaatgtacaagttccaatacaaaatttctattttaaacttcttaagatgtgcaaatttgcaca 45501625  T
Q  201 tgatagaaaaac 212  Q
    ||||||||||||    
T  45501626 tgatagaaaaac 45501637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 103 - 211
Target Start/End: Original strand, 5833424 - 5833532
Alignment:
Q  103 acaattatttattaaaaaattatatatttaatagaaaatacacaagtttcaatacaaacatactactttaaacttattaacgtatgcaaatttgcatatg 202  Q
    |||| |||||||||||||  || |||||||||| | ||| ||||||||  || || ||  |||| |||||||||| ||||| | |||||||||||| |||    
T  5833424 acaactatttattaaaaagctacatatttaatatagaatgcacaagttctaagacgaagttactgctttaaactttttaacatgtgcaaatttgcacatg 5833523  T
Q  203 atagaaaaa 211  Q
    |||||||||    
T  5833524 atagaaaaa 5833532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 101 - 161
Target Start/End: Complemental strand, 11680129 - 11680069
Alignment:
Q  101 caacaattatttattaaaaaattatatatttaatagaaaatacacaagtttcaatacaaac 161  Q
    |||||||||||||||||||| |||||||||||||| |||||  | || |||||||||||||    
T  11680129 caacaattatttattaaaaagttatatatttaatataaaatgtaaaaatttcaatacaaac 11680069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 101 - 213
Target Start/End: Complemental strand, 39757220 - 39757109
Alignment:
Q  101 caacaattatttattaaaaaattatatatttaatagaaaatacacaagtttcaatacaaacatactactttaaacttattaacgtatgcaaatttgcata 200  Q
    ||||||||||| |||||||  | | |||||||||| |||| |||||| ||||||   |||  ||||| ||||||||| ||||| | |||||||||||| |    
T  39757220 caacaattattgattaaaagct-acatatttaatataaaaaacacaaatttcaagttaaagttactattttaaacttcttaacatgtgcaaatttgcaca 39757122  T
Q  201 tgatagaaaaacc 213  Q
    |||||||||||||    
T  39757121 tgatagaaaaacc 39757109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 116 - 211
Target Start/End: Complemental strand, 28061419 - 28061324
Alignment:
Q  116 aaaaaattatatatttaatagaaaatacacaagtttcaatacaaacatactactttaaacttattaacgtatgcaaatttgcatatgatagaaaaa 211  Q
    |||||| ||||||||||||  |||||||||||||| ||||| |||| ||||||||||   |  ||||| | |||||||||||| ||| ||||||||    
T  28061419 aaaaaaatatatatttaatgtaaaatacacaagttccaatataaacttactactttagtatctttaacatgtgcaaatttgcacatgttagaaaaa 28061324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 102 - 213
Target Start/End: Original strand, 6587853 - 6587965
Alignment:
Q  102 aacaattatttattaaaaaattatatatttaatagaaaatacacaagtttcaatacaaacatactacttt--aaacttattaacgtatgcaaatttgcat 199  Q
    |||||||||||||||||||| || ||||||| ||  |||||||||||||| ||||||||  || |  |||  |||||| ||||  | ||||||||||||     
T  6587853 aacaattatttattaaaaaa-taaatatttattattaaatacacaagttttaatacaaatttaatttttttaaaactttttaatatgtgcaaatttgcac 6587951  T
Q  200 atgatagaaaaacc 213  Q
    ||||||||||||||    
T  6587952 atgatagaaaaacc 6587965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 104 - 213
Target Start/End: Complemental strand, 8420941 - 8420832
Alignment:
Q  104 caattatttattaaaaaattatatatttaatagaaaatacacaagtttcaatacaaacatactactttaaacttattaacgtatgcaaatttgcatatga 203  Q
    ||||||||||||||||| || ||||||||||| |||| |||||||||  || | |||| ||| | |||||| || ||||| | | ||||||||   ||||    
T  8420941 caattatttattaaaaagttgtatatttaatataaaagacacaagttataagataaacttaccattttaaattttttaacatgtacaaatttgttcatga 8420842  T
Q  204 tagaaaaacc 213  Q
    ||||||||||    
T  8420841 tagaaaaacc 8420832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 113 - 210
Target Start/End: Complemental strand, 41331555 - 41331458
Alignment:
Q  113 attaaaaaattatatatttaatagaaaatacacaagtttcaatacaaacatactactttaaacttattaacgtatgcaaatttgcatatgatagaaaa 210  Q
    ||||||||  || |||||||||| ||||| |||||||| |||  ||||  |||||||||||| || ||| | | |||||||||||| |||||||||||    
T  41331555 attaaaaacctacatatttaatataaaatgcacaagttccaagtcaaagttactactttaaatttcttatcatgtgcaaatttgcacatgatagaaaa 41331458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 109 - 213
Target Start/End: Complemental strand, 22041829 - 22041725
Alignment:
Q  109 atttattaaaaaattatatatttaatagaaaatacacaagtttcaatacaaacatactactttaaacttattaacgtatgcaaatttgcatatgatagaa 208  Q
    |||||||||||| |||||||||||||| | | |||| || ||| |||| |||  || || ||| ||||| |||||   |||||||||||| |||||||||    
T  22041829 atttattaaaaagttatatatttaatatacagtacataaattttaatataaatttagtattttgaacttcttaacaagtgcaaatttgcacatgatagaa 22041730  T
Q  209 aaacc 213  Q
    |||||    
T  22041729 aaacc 22041725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 105 - 213
Target Start/End: Original strand, 33072052 - 33072160
Alignment:
Q  105 aattatttattaaaaaattatatatttaatagaaaatacacaagtttcaatacaaacatactactttaaacttattaacgtatgcaaatttgcatatgat 204  Q
    |||||||||  ||||| |||||||||||||| |||||   ||| || |||| ||||  ||||| |||||| || ||||| | | |||||||||| |||||    
T  33072052 aattatttaacaaaaagttatatatttaatacaaaatgttcaaattccaatgcaaagttactattttaaatttcttaacatgtacaaatttgcacatgat 33072151  T
Q  205 agaaaaacc 213  Q
    |||||||||    
T  33072152 agaaaaacc 33072160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 101 - 213
Target Start/End: Complemental strand, 36548570 - 36548459
Alignment:
Q  101 caacaattatttattaaaaaattatatatttaatagaaaatacacaagtttcaatacaaacatactactttaaacttattaacgtatgcaaatttgcata 200  Q
    ||||||||||| |||||| | ||| |||||||||| |||| | |||| ||| ||  ||||  ||||| ||||||||| ||||| | |||||||||||| |    
T  36548570 caacaattattgattaaata-ttacatatttaatataaaaaatacaaattttaagtcaaagttactaatttaaacttcttaacatgtgcaaatttgcaca 36548472  T
Q  201 tgatagaaaaacc 213  Q
    ||||| |||||||    
T  36548471 tgataaaaaaacc 36548459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 123 - 211
Target Start/End: Complemental strand, 38798159 - 38798071
Alignment:
Q  123 tatatatttaatagaaaatacacaagtttcaatacaaacatactactttaaacttattaacgtatgcaaatttgcatatgatagaaaaa 211  Q
    ||||||||||||  |||||||||||||| ||||| |||| ||||||||||   |  ||||| | |||||||||||| ||| ||||||||    
T  38798159 tatatatttaatgtaaaatacacaagttccaatataaacttactactttagtatccttaacatgtgcaaatttgcacatgttagaaaaa 38798071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 123 - 211
Target Start/End: Complemental strand, 42593483 - 42593395
Alignment:
Q  123 tatatatttaatagaaaatacacaagtttcaatacaaacatactactttaaacttattaacgtatgcaaatttgcatatgatagaaaaa 211  Q
    ||||||||||||  |||||||||||||| ||||| |||| ||||||||||   |  ||||| | |||||||||||| ||| ||||||||    
T  42593483 tatatatttaatgtaaaatacacaagttccaatataaacttactactttagtatccttaacatgtgcaaatttgcacatgttagaaaaa 42593395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 123 - 211
Target Start/End: Original strand, 45645456 - 45645544
Alignment:
Q  123 tatatatttaatagaaaatacacaagtttcaatacaaacatactactttaaacttattaacgtatgcaaatttgcatatgatagaaaaa 211  Q
    ||||||||||||  |||||||||||||| ||||| |||| ||||||||||   |  ||||| | |||||||||||| ||| ||||||||    
T  45645456 tatatatttaatgtaaaatacacaagttccaatataaacttactactttagtatccttaacatgtgcaaatttgcacatgttagaaaaa 45645544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 101 - 212
Target Start/End: Complemental strand, 384540 - 384431
Alignment:
Q  101 caacaattatttattaaaaaattatatatttaatagaaaatacacaagtttcaatacaaacatactactttaaacttattaacgtatgcaaatttgcata 200  Q
    ||||||||||| |||||||  | | |||||||||| |||| | ||||||| |||   |||  ||||||||||||||| ||||| | |||||||||||| |    
T  384540 caacaattattgattaaaagct-acatatttaatataaaaaaaacaagttccaagttaaagttactactttaaacttcttaacatgtgcaaatttgca-a 384443  T
Q  201 tgatagaaaaac 212  Q
    ||||||||||||    
T  384442 tgatagaaaaac 384431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 125 - 212
Target Start/End: Complemental strand, 29398221 - 29398134
Alignment:
Q  125 tatatttaatagaaaatacacaagtttcaatacaaacatactactttaaacttattaacgtatgcaaatttgcatatgatagaaaaac 212  Q
    |||||||||||  ||||  ||||||| |||||||||  | ||| ||||||||| ||||| | |||||||||| | |||||||||||||    
T  29398221 tatatttaatattaaatgtacaagttccaatacaaaatttctattttaaacttcttaacatgtgcaaatttgaacatgatagaaaaac 29398134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 102 - 213
Target Start/End: Complemental strand, 47457571 - 47457460
Alignment:
Q  102 aacaattatttattaaaaaattatatatttaatagaaaatacacaagtttcaatacaaacatactactttaaacttattaacgtatgcaaatttgcatat 201  Q
    |||||||||||||| ||||  || | || ||||| ||||| || || || |||  ||||  |||||||||||| || ||||| | |||||||||||| ||    
T  47457571 aacaattatttatttaaaagctacacatataatataaaatgcataaattccaagtcaaagttactactttaaattttttaacatgtgcaaatttgcacat 47457472  T
Q  202 gatagaaaaacc 213  Q
    ||||||||||||    
T  47457471 gatagaaaaacc 47457460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 101 - 210
Target Start/End: Complemental strand, 18102341 - 18102232
Alignment:
Q  101 caacaattatttattaaaaaattatatatttaatagaaaata-cacaagtttcaatacaaacatactactttaaacttattaacgtatgcaaatttgcat 199  Q
    ||||||||||| ||||||   ||| |||||||||| |||| | ||||||||||||  ||||  || || ||||||||| ||||| | ||||||||||||     
T  18102341 caacaattattgattaaatg-ttacatatttaatataaaaaaacacaagtttcaagtcaaagttattaatttaaacttcttaacatgtgcaaatttgcac 18102243  T
Q  200 atgatagaaaa 210  Q
    |||||||||||    
T  18102242 atgatagaaaa 18102232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 144 - 210
Target Start/End: Original strand, 26037203 - 26037269
Alignment:
Q  144 acaagtttcaatacaaacatactactttaaacttattaacgtatgcaaatttgcatatgatagaaaa 210  Q
    ||||||| |||||||||  | ||| ||||||||| ||||| | |||||||||||| |||||||||||    
T  26037203 acaagttccaatacaaaatttctattttaaacttcttaacatctgcaaatttgcacatgatagaaaa 26037269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 100 - 150
Target Start/End: Original strand, 27696742 - 27696792
Alignment:
Q  100 gcaacaattatttattaaaaaattatatatttaatagaaaatacacaagtt 150  Q
    ||||||||||||||||||||| ||||||  |||||| ||||| ||||||||    
T  27696742 gcaacaattatttattaaaaagttatatcattaataaaaaatgcacaagtt 27696792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 123 - 172
Target Start/End: Complemental strand, 38798297 - 38798248
Alignment:
Q  123 tatatatttaatagaaaatacacaagtttcaatacaaacatactacttta 172  Q
    ||||||||||||  |||||||||||||| ||||| |||| ||||||||||    
T  38798297 tatatatttaatgtaaaatacacaagttccaatataaacttactacttta 38798248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 101 - 142
Target Start/End: Original strand, 41572286 - 41572327
Alignment:
Q  101 caacaattatttattaaaaaattatatatttaatagaaaata 142  Q
    |||||||||||||||| ||| |||||||||||||| ||||||    
T  41572286 caacaattatttattagaaagttatatatttaatacaaaata 41572327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 102 - 147
Target Start/End: Original strand, 46185374 - 46185419
Alignment:
Q  102 aacaattatttattaaaaaattatatatttaatagaaaatacacaa 147  Q
    |||||||||||||||||||  |||||||||||||  ||||||||||    
T  46185374 aacaattatttattaaaaagatatatatttaatattaaatacacaa 46185419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 169 - 213
Target Start/End: Complemental strand, 820584 - 820540
Alignment:
Q  169 tttaaacttattaacgtatgcaaatttgcatatgatagaaaaacc 213  Q
    ||||||||| ||||| | |||||||||||| ||||||||||||||    
T  820584 tttaaacttcttaacatgtgcaaatttgcacatgatagaaaaacc 820540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 65; Significance: 1e-28; HSPs: 49)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 101 - 213
Target Start/End: Original strand, 6307570 - 6307681
Alignment:
Q  101 caacaattatttattaaaaaattatatatttaatagaaaatacacaagtttcaatacaaacatactactttaaacttattaacgtatgcaaatttgcata 200  Q
    |||||||||||||||||||| ||||||||| ||||||||||||||||||| |||  |||||||| |||||||||||| ||||| | |||||||||||| |    
T  6307570 caacaattatttattaaaaatttatatatt-aatagaaaatacacaagttccaaatcaaacatattactttaaacttcttaacatgtgcaaatttgcaca 6307668  T
Q  201 tgatagaaaaacc 213  Q
    ||||| |||||||    
T  6307669 tgatataaaaacc 6307681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 101 - 213
Target Start/End: Original strand, 36490846 - 36490958
Alignment:
Q  101 caacaattatttattaaaaaattatatatttaatagaaaatacacaagtttcaatacaaacatactactttaaacttattaacgtatgcaaatttgcata 200  Q
    |||||||||||||||||||| ||||||||| |||| |||||  ||||||| |||| ||||  ||||| ||||||||| ||||| | |||||||||||  |    
T  36490846 caacaattatttattaaaaagttatatattaaatacaaaatgtacaagttccaatgcaaagttactattttaaacttcttaacatgtgcaaatttgctca 36490945  T
Q  201 tgatagaaaaacc 213  Q
    |||||||||||||    
T  36490946 tgatagaaaaacc 36490958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 111 - 213
Target Start/End: Original strand, 4249282 - 4249385
Alignment:
Q  111 ttattaaaa-aattatatatttaatagaaaatacacaagtttcaatacaaacatactactttaaacttattaacgtatgcaaatttgcatatgatagaaa 209  Q
    ||||||||| |||||||||||||||  |||||||||||||||||||| |||| ||  ||||||||||||||||| | ||| |||||||| ||| ||||||    
T  4249282 ttattaaaataattatatatttaatgtaaaatacacaagtttcaatataaacttaaaactttaaacttattaacatgtgcgaatttgcacatgttagaaa 4249381  T
Q  210 aacc 213  Q
    ||||    
T  4249382 aacc 4249385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 112 - 213
Target Start/End: Original strand, 4249607 - 4249709
Alignment:
Q  112 tattaaaa-aattatatatttaatagaaaatacacaagtttcaatacaaacatactactttaaacttattaacgtatgcaaatttgcatatgatagaaaa 210  Q
    |||||||| |||||||||||||||  |||||||||||||||||||| |||| ||  ||||||||||||||||| | ||| |||||||| ||| |||||||    
T  4249607 tattaaaataattatatatttaatgtaaaatacacaagtttcaatataaacttaaaactttaaacttattaacatgtgcgaatttgcacatgttagaaaa 4249706  T
Q  211 acc 213  Q
    |||    
T  4249707 acc 4249709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 112 - 213
Target Start/End: Original strand, 4249931 - 4250033
Alignment:
Q  112 tattaaaa-aattatatatttaatagaaaatacacaagtttcaatacaaacatactactttaaacttattaacgtatgcaaatttgcatatgatagaaaa 210  Q
    |||||||| |||||||||||||||  |||||||||||||||||||| |||| ||  ||||||||||||||||| | ||| |||||||| ||| |||||||    
T  4249931 tattaaaataattatatatttaatgtaaaatacacaagtttcaatataaacttaaaactttaaacttattaacatgtgcgaatttgcacatgttagaaaa 4250030  T
Q  211 acc 213  Q
    |||    
T  4250031 acc 4250033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 105 - 211
Target Start/End: Original strand, 13241828 - 13241934
Alignment:
Q  105 aattatttattaaaaaattatatatttaatagaaaatacacaagtttcaatacaaacatactactttaaacttattaacgtatgcaaatttgcatatgat 204  Q
    |||||||||||||||||||||||||||||||  ||||||||||||| ||  |||||| ||| | |||||| || ||||| | ||||||||| || |||||    
T  13241828 aattatttattaaaaaattatatatttaatatgaaatacacaagttacacgacaaacttaccattttaaatttcttaacatgtgcaaattttcacatgat 13241927  T
Q  205 agaaaaa 211  Q
    |||||||    
T  13241928 agaaaaa 13241934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 101 - 213
Target Start/End: Complemental strand, 23576525 - 23576413
Alignment:
Q  101 caacaattatttattaaaaaattatatatttaatagaaaatacacaagtttcaatacaaacatactactttaaacttattaacgtatgcaaatttgcata 200  Q
    |||||||||||||  ||||| |||||||||||||| |||||   ||||||||||| ||||  ||||| |||||| || ||||| | |||||||||||| |    
T  23576525 caacaattatttaacaaaaagttatatatttaatacaaaatgttcaagtttcaatgcaaagttactattttaaatttcttaacatgtgcaaatttgcaca 23576426  T
Q  201 tgatagaaaaacc 213  Q
    |||||||||||||    
T  23576425 tgatagaaaaacc 23576413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 101 - 213
Target Start/End: Original strand, 41624896 - 41625008
Alignment:
Q  101 caacaattatttattaaaaaattatatatttaatagaaaatacacaagtttcaatacaaacatactactttaaacttattaacgtatgcaaatttgcata 200  Q
    ||||||||| ||||||||||  || ||| |||||| ||||| |||||||| |||  ||||  ||||||||||||||| ||| | |||||||||||||| |    
T  41624896 caacaattaattattaaaaatctacataattaatataaaatgcacaagttccaagtcaaagttactactttaaacttcttatcatatgcaaatttgcaca 41624995  T
Q  201 tgatagaaaaacc 213  Q
    |||||||||||||    
T  41624996 tgatagaaaaacc 41625008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 104 - 211
Target Start/End: Original strand, 9516651 - 9516758
Alignment:
Q  104 caattatttattaaaaaattatatatttaatagaaaatacacaagtttcaatacaaacatactactttaaacttattaacgtatgcaaatttgcatatga 203  Q
    ||||||||||||||||| |||||||||||||| ||||||||||||||  || | |||| ||| | |||||| || ||||| | ||||||||| || ||||    
T  9516651 caattatttattaaaaagttatatatttaatataaaatacacaagttataagagaaacttaccattttaaatttcttaacatgtgcaaatttacacatga 9516750  T
Q  204 tagaaaaa 211  Q
    ||||||||    
T  9516751 tagaaaaa 9516758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 101 - 195
Target Start/End: Original strand, 49392150 - 49392242
Alignment:
Q  101 caacaattatttattaaaaaattatatatttaatagaaaatacacaagtttcaatacaaacatactactttaaacttattaacgtatgcaaattt 195  Q
    ||||| ||||||||||||||| ||||  |||||||  ||||||||| ||||||||||||||||||||||||||| || ||||| | |||||||||    
T  49392150 caacagttatttattaaaaaagtata--tttaataagaaatacacatgtttcaatacaaacatactactttaaattttttaacatgtgcaaattt 49392242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 101 - 213
Target Start/End: Complemental strand, 3168180 - 3168067
Alignment:
Q  101 caacaattatttattaaaaaattat-atatttaatagaaaatacacaagtttcaatacaaacatactactttaaacttattaacgtatgcaaatttgcat 199  Q
    ||||||||||||||| |||||  || ||||||||||  ||||  ||||||| |||||| || || ||| ||||||||| ||||||| ||||||||||||     
T  3168180 caacaattatttattcaaaaaaaattatatttaatattaaatgtacaagttccaatactaaaattctattttaaactttttaacgtgtgcaaatttgcac 3168081  T
Q  200 atgatagaaaaacc 213  Q
    ||||||||||||||    
T  3168080 atgatagaaaaacc 3168067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 101 - 213
Target Start/End: Original strand, 6754538 - 6754650
Alignment:
Q  101 caacaattatttattaaaaaattatatatttaatagaaaatacacaagtttcaatacaaacatactactttaaacttattaacgtatgcaaatttgcata 200  Q
    ||||||||| ||||||||||  || ||| |||||| ||||| |||||||| |||  ||||  ||||||||||||||| ||| | | |||||||||||| |    
T  6754538 caacaattaattattaaaaatctacataattaatataaaatgcacaagttccaagtcaaagttactactttaaacttcttatcatgtgcaaatttgcaca 6754637  T
Q  201 tgatagaaaaacc 213  Q
    |||||||||||||    
T  6754638 tgatagaaaaacc 6754650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 101 - 213
Target Start/End: Original strand, 13321943 - 13322055
Alignment:
Q  101 caacaattatttattaaaaaattatatatttaatagaaaatacacaagtttcaatacaaacatactactttaaacttattaacgtatgcaaatttgcata 200  Q
    |||||||||||| || |||| || |||||||||||  ||||  |||| || |||||||||  | ||| ||||||||| ||||| |||||||||||||| |    
T  13321943 caacaattattttttcaaaagttttatatttaatattaaatgtacaaattccaatacaaaatttctattttaaacttcttaacatatgcaaatttgcaca 13322042  T
Q  201 tgatagaaaaacc 213  Q
    |||||||||||||    
T  13322043 tgatagaaaaacc 13322055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 101 - 213
Target Start/End: Original strand, 38812807 - 38812919
Alignment:
Q  101 caacaattatttattaaaaaattatatatttaatagaaaatacacaagtttcaatacaaacatactactttaaacttattaacgtatgcaaatttgcata 200  Q
    ||||||||||||||| |||| || |||||||||||  ||||  ||||||||||||| |||  | ||| ||| ||||| ||||| | |||||||||||| |    
T  38812807 caacaattatttattcaaaagttttatatttaatattaaatgtacaagtttcaatataaaatttctattttgaacttcttaacatgtgcaaatttgcaca 38812906  T
Q  201 tgatagaaaaacc 213  Q
    |||||||||||||    
T  38812907 tgatagaaaaacc 38812919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 101 - 213
Target Start/End: Complemental strand, 39150437 - 39150326
Alignment:
Q  101 caacaattatttattaaaaaattatatatttaatagaaaatacacaagtttcaatacaaacatactactttaaacttattaacgtatgcaaatttgcata 200  Q
    |||||||||||||||||||  ||| |||||||||| |||| |||||| || |||  ||||  ||||||||||||||| ||| | | |||||||||||| |    
T  39150437 caacaattatttattaaaag-ttacatatttaatataaaaaacacaaattccaagtcaaagttactactttaaacttcttatcatgtgcaaatttgcaca 39150339  T
Q  201 tgatagaaaaacc 213  Q
    |||||||||||||    
T  39150338 tgatagaaaaacc 39150326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 109 - 212
Target Start/End: Original strand, 5057077 - 5057180
Alignment:
Q  109 atttattaaaaaattatatatttaatagaaaatacacaagtttcaatacaaacatactactttaaacttattaacgtatgcaaatttgcatatgatagaa 208  Q
    ||||||||||||  ||||||||||||| |||||  |||||||||||  ||||  ||| ||||||||||| | ||| | ||||||||||||||| ||||||    
T  5057077 atttattaaaaagatatatatttaatataaaatgtacaagtttcaagtcaaagttaccactttaaacttttgaacatttgcaaatttgcatataatagaa 5057176  T
Q  209 aaac 212  Q
    ||||    
T  5057177 aaac 5057180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 104 - 211
Target Start/End: Original strand, 35438785 - 35438892
Alignment:
Q  104 caattatttattaaaaaattatatatttaatagaaaatacacaagtttcaatacaaacatactactttaaacttattaacgtatgcaaatttgcatatga 203  Q
    ||||| ||||||||||| |||||||||||||| ||||||||||| ||  || | |||| ||| | |||||| || ||||| | |||||||||||| ||||    
T  35438785 caattgtttattaaaaagttatatatttaatataaaatacacaaattataagataaacttaccattttaaatttcttaacatgtgcaaatttgcacatga 35438884  T
Q  204 tagaaaaa 211  Q
    ||||||||    
T  35438885 tagaaaaa 35438892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 101 - 212
Target Start/End: Complemental strand, 51920542 - 51920431
Alignment:
Q  101 caacaattatttattaaaaaattatatatttaatagaaaatacacaagtttcaatacaaacatactactttaaacttattaacgtatgcaaatttgcata 200  Q
    ||||||||||||||| |||| || |||||||||||  ||||| |||| ||| |||| |||  | ||| |||||| |||||||| | |||||||||||| |    
T  51920542 caacaattatttattcaaaagttttatatttaatattaaatatacaaattttaatataaaatttctattttaaatttattaacatgtgcaaatttgcaca 51920443  T
Q  201 tgatagaaaaac 212  Q
    ||||||||||||    
T  51920442 tgatagaaaaac 51920431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 107 - 213
Target Start/End: Original strand, 30171952 - 30172058
Alignment:
Q  107 ttatttattaaaaaattatatatttaatagaaaatacacaagtttcaatacaaacatactactttaaacttattaacgtatgcaaatttgcatatgatag 206  Q
    ||||||||||||||  || ||||||||||  |||| |||||||| |||  ||||  ||| ||||||||||| ||||| | |||||||||||| |||||||    
T  30171952 ttatttattaaaaagctacatatttaatatgaaatgcacaagttccaagtcaaagttaccactttaaacttcttaacatgtgcaaatttgcacatgatag 30172051  T
Q  207 aaaaacc 213  Q
    |||||||    
T  30172052 aaaaacc 30172058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 107 - 213
Target Start/End: Original strand, 30187493 - 30187599
Alignment:
Q  107 ttatttattaaaaaattatatatttaatagaaaatacacaagtttcaatacaaacatactactttaaacttattaacgtatgcaaatttgcatatgatag 206  Q
    ||||||||||||||  || ||||||||||  |||| |||||||| |||  ||||  ||| ||||||||||| ||||| | |||||||||||| |||||||    
T  30187493 ttatttattaaaaagctacatatttaatatgaaatgcacaagttccaagtcaaagttaccactttaaacttcttaacatgtgcaaatttgcacatgatag 30187592  T
Q  207 aaaaacc 213  Q
    |||||||    
T  30187593 aaaaacc 30187599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 102 - 183
Target Start/End: Original strand, 52337834 - 52337915
Alignment:
Q  102 aacaattatttattaaaaaattatatatttaatagaaaatacacaagtttcaatacaaacatactactttaaacttattaac 183  Q
    ||||||||||||||||||| |||||||||||||| |||||||| ||||| |||| || |  ||||| ||||||||| |||||    
T  52337834 aacaattatttattaaaaatttatatatttaatataaaatacataagttgcaatgcatatttactattttaaacttcttaac 52337915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 101 - 213
Target Start/End: Original strand, 313817 - 313928
Alignment:
Q  101 caacaattatttattaaaaaattatatatttaatagaaaatacacaagtttcaatacaaacatactactttaaacttattaacgtatgcaaatttgcata 200  Q
    ||||||||||| |||||||  | | |||||||||| |||| ||||||||| |||   |||  ||||||||||||||| ||||| | |||||||||||| |    
T  313817 caacaattattgattaaaagct-acatatttaatataaaaaacacaagttccaagttaaagttactactttaaacttcttaacatgtgcaaatttgcaca 313915  T
Q  201 tgatagaaaaacc 213  Q
    |||||||||||||    
T  313916 tgatagaaaaacc 313928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 101 - 213
Target Start/End: Complemental strand, 1502831 - 1502719
Alignment:
Q  101 caacaattatttattaaaaaattatatatttaatagaaaatacacaagtttcaatacaaacatactactttaaacttattaacgtatgcaaatttgcata 200  Q
    |||||||||||||  ||||| |||||||||||||| |||||   ||| || |||| ||||  ||||| |||||| || ||||| | |||||||||||| |    
T  1502831 caacaattatttaacaaaaagttatatatttaatacaaaatgttcaaattccaatgcaaagttactattttaaatttcttaacatgtgcaaatttgcaca 1502732  T
Q  201 tgatagaaaaacc 213  Q
    |||||||||||||    
T  1502731 tgatagaaaaacc 1502719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 105 - 213
Target Start/End: Original strand, 6180257 - 6180365
Alignment:
Q  105 aattatttattaaaaaattatatatttaatagaaaatacacaagtttcaatacaaacatactactttaaacttattaacgtatgcaaatttgcatatgat 204  Q
    ||||||||||| |||| || |||||||||||  ||||  ||||||| ||||| |||  | ||| ||||||||| ||||| | |||||||||||| |||||    
T  6180257 aattatttatttaaaagttttatatttaatattaaatgtacaagttccaatataaaatttctattttaaacttcttaacatgtgcaaatttgcacatgat 6180356  T
Q  205 agaaaaacc 213  Q
    |||||||||    
T  6180357 agaaaaacc 6180365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 101 - 213
Target Start/End: Complemental strand, 6570095 - 6569984
Alignment:
Q  101 caacaattatttattaaaaaattatatatttaatagaaaatacacaagtttcaatacaaacatactactttaaacttattaacgtatgcaaatttgcata 200  Q
    ||||||||||| |||||||  | | |||||||||| |||| ||||||||| |||   |||  ||||||||||||||| ||||| | |||||||||||| |    
T  6570095 caacaattattgattaaaagct-acatatttaatataaaaaacacaagttccaagttaaagttactactttaaacttcttaacatgtgcaaatttgcaca 6569997  T
Q  201 tgatagaaaaacc 213  Q
    |||||||||||||    
T  6569996 tgatagaaaaacc 6569984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 101 - 213
Target Start/End: Original strand, 17919521 - 17919632
Alignment:
Q  101 caacaattatttattaaaaaattatatatttaatagaaaatacacaagtttcaatacaaacatactactttaaacttattaacgtatgcaaatttgcata 200  Q
    |||||||||||||||||||  ||| |||||||||| |||| |||||| || |||  ||||  ||||||||||||||| |||   | |||||||||||| |    
T  17919521 caacaattatttattaaaag-ttacatatttaatataaaaaacacaaattccaagtcaaagttactactttaaacttcttattatgtgcaaatttgcaca 17919619  T
Q  201 tgatagaaaaacc 213  Q
    |||||||||||||    
T  17919620 tgatagaaaaacc 17919632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 101 - 213
Target Start/End: Original strand, 22167402 - 22167514
Alignment:
Q  101 caacaattatttattaaaaaattatatatttaatagaaaatacacaagtttcaatacaaacatactactttaaacttattaacgtatgcaaatttgcata 200  Q
    ||||||||||||||| ||||| | |||||||||||  ||||  ||||||| |||||||||  | ||| ||||||||| ||| | | |||||||||||| |    
T  22167402 caacaattatttattcaaaaaatttatatttaatattaaatgtacaagttccaatacaaagtttctattttaaacttcttatcatgtgcaaatttgcaca 22167501  T
Q  201 tgatagaaaaacc 213  Q
    |||||| ||||||    
T  22167502 tgataggaaaacc 22167514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 101 - 213
Target Start/End: Complemental strand, 30363106 - 30362994
Alignment:
Q  101 caacaattatttattaaaaaattatatatttaatagaaaatacacaagtttcaatacaaacatactactttaaacttattaacgtatgcaaatttgcata 200  Q
    ||||||||| ||||||||||  || |||||||||| ||||| |||||||| |||  ||||  ||||| |||||| || ||| | | |||||||||||| |    
T  30363106 caacaattaattattaaaaacctacatatttaatataaaatgcacaagttccaagtcaaagttactattttaaatttgttatcatgtgcaaatttgcaca 30363007  T
Q  201 tgatagaaaaacc 213  Q
    |||||||||||||    
T  30363006 tgatagaaaaacc 30362994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 105 - 212
Target Start/End: Original strand, 23591769 - 23591876
Alignment:
Q  105 aattatttattaaaaaattatatatttaatagaaaatacacaagtttcaatacaaacatactactttaaacttattaacgtatgcaaatttgcatatgat 204  Q
    |||||||||||||||| |||||||||||||| |||||  ||||||| |||| ||||  |  || || ||| || ||||| | |||||||||||| |||||    
T  23591769 aattatttattaaaaagttatatatttaatacaaaatgtacaagttccaatgcaaagttgttatttaaaatttcttaacatgtgcaaatttgcacatgat 23591868  T
Q  205 agaaaaac 212  Q
    ||||||||    
T  23591869 agaaaaac 23591876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 101 - 160
Target Start/End: Original strand, 26978115 - 26978174
Alignment:
Q  101 caacaattatttattaaaaaattatatatttaatagaaaatacacaagtttcaatacaaa 160  Q
    ||||||||||||||| ||||||| |||||||||||  ||||| |||||||||||||||||    
T  26978115 caacaattatttattcaaaaattttatatttaatattaaatatacaagtttcaatacaaa 26978174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 105 - 212
Target Start/End: Complemental strand, 29635855 - 29635748
Alignment:
Q  105 aattatttattaaaaaattatatatttaatagaaaatacacaagtttcaatacaaacatactactttaaacttattaacgtatgcaaatttgcatatgat 204  Q
    |||||||||||||||| |||||| || |||| |||||| ||||||||||||| |||  ||||| |||||| || ||||| | | |||||||  | |||||    
T  29635855 aattatttattaaaaagttatatgttaaatacaaaatatacaagtttcaatataaagttactattttaaattttttaacatgtacaaatttataaatgat 29635756  T
Q  205 agaaaaac 212  Q
    ||||||||    
T  29635755 agaaaaac 29635748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 107 - 213
Target Start/End: Original strand, 34802041 - 34802146
Alignment:
Q  107 ttatttattaaaaaattatatatttaatagaaaatacacaagtttcaatacaaacatactactttaaacttattaacgtatgcaaatttgcatatgatag 206  Q
    ||||||||||||||| || ||||||||||  |||| |||||||| ||  |||||  ||| | ||||||||| ||||| | |||||||||||| |||||||    
T  34802041 ttatttattaaaaaactacatatttaatatgaaatgcacaagttccag-acaaaattaccattttaaacttcttaacatgtgcaaatttgcacatgatag 34802139  T
Q  207 aaaaacc 213  Q
    |||||||    
T  34802140 aaaaacc 34802146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 101 - 210
Target Start/End: Complemental strand, 32543161 - 32543052
Alignment:
Q  101 caacaattatttattaaaaaattatatatttaatagaaaatacacaagtttcaatacaaacatactactttaaacttattaacgtatgcaaatttgcata 200  Q
    |||||||||||||||||||||   ||||||||||| || |  ||||| ||  ||||||||| |||||  || ||||| ||||| | ||||||||||||||    
T  32543161 caacaattatttattaaaaaacagtatatttaatataatacgcacaaattctaatacaaacttactaacttgaacttcttaacatgtgcaaatttgcata 32543062  T
Q  201 tgatagaaaa 210  Q
    ||||| ||||    
T  32543061 tgatataaaa 32543052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 105 - 161
Target Start/End: Complemental strand, 50467493 - 50467436
Alignment:
Q  105 aattatttattaaaaaattatata-tttaatagaaaatacacaagtttcaatacaaac 161  Q
    |||||||||||||||||||||||| ||||||| |||||||| ||||||||| ||||||    
T  50467493 aattatttattaaaaaattatatattttaatataaaatacataagtttcaagacaaac 50467436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 101 - 213
Target Start/End: Original strand, 25465225 - 25465337
Alignment:
Q  101 caacaattatttattaaaaaattatatatttaatagaaaatacacaagtttcaatacaaacatactactttaaacttattaacgtatgcaaatttgcata 200  Q
    |||||||||||||| ||||| ||| ||||||   |  |||| |||||||| |||| ||||  ||||| ||| ||||| ||||| | |||||||||||| |    
T  25465225 caacaattatttatcaaaaagttaaatattttccattaaatgcacaagttccaatgcaaatttactattttgaacttcttaacatgtgcaaatttgcaca 25465324  T
Q  201 tgatagaaaaacc 213  Q
    |||||||||||||    
T  25465325 tgatagaaaaacc 25465337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 101 - 213
Target Start/End: Complemental strand, 30288974 - 30288863
Alignment:
Q  101 caacaattatttattaaaaaattatatatttaatagaaaatacacaagtttcaatacaaacatactactttaaacttattaacgtatgcaaatttgcata 200  Q
    ||||||||||| |||||||  | | |||||||||| |||| ||||||||| |||   |||  ||||||||||||||| ||||| | || ||||||||| |    
T  30288974 caacaattattgattaaaagct-acatatttaatataaaaaacacaagttccaagttaaaattactactttaaacttcttaacatgtgtaaatttgcaca 30288876  T
Q  201 tgatagaaaaacc 213  Q
    |||||||||||||    
T  30288875 tgatagaaaaacc 30288863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 101 - 160
Target Start/End: Complemental strand, 34050394 - 34050335
Alignment:
Q  101 caacaattatttattaaaaaattatatatttaatagaaaatacacaagtttcaatacaaa 160  Q
    |||||||||||||| ||||||||||||||| |||| |||||  | |||||||||||||||    
T  34050394 caacaattatttatcaaaaaattatatattaaatataaaatgtaaaagtttcaatacaaa 34050335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 113 - 195
Target Start/End: Original strand, 24669006 - 24669088
Alignment:
Q  113 attaaaaaattatatatttaatagaaaatacacaagtttcaatacaaacatactactttaaacttattaacgtatgcaaattt 195  Q
    ||||||||||||||||||||||| ||||| || |||||  |||| |||  ||||| ||||||||| ||||| | |||||||||    
T  24669006 attaaaaaattatatatttaatataaaatgcataagttataatataaatttactattttaaacttcttaacatgtgcaaattt 24669088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 114 - 211
Target Start/End: Original strand, 43909273 - 43909368
Alignment:
Q  114 ttaaaaaattatatatttaatagaaaatacacaagtttcaatacaaacatactactttaaacttattaacgtatgcaaatttgcatatgatagaaaaa 211  Q
    ||||||| |||||||||||||| ||||||||||||||  || |||||| ||| | || ||| || ||||  | |||||||||||| ||||||||||||    
T  43909273 ttaaaaagttatatatttaatataaaatacacaagttataagacaaacttaccatttaaaattttttaa--tgtgcaaatttgcacatgatagaaaaa 43909368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 101 - 198
Target Start/End: Original strand, 8062272 - 8062368
Alignment:
Q  101 caacaattatttattaaaaaattatatatttaatagaaaatacacaagtttcaatacaaacatactactttaaacttattaacgtatgcaaatttgca 198  Q
    ||||||||||| |||||||| | |||||||||||| |||| ||| || ||||||   |||  ||||||||||||||| ||||| | ||||||||||||    
T  8062272 caacaattattgattaaaaact-atatatttaatataaaaaacataaatttcaaattaaagttactactttaaactttttaacatgtgcaaatttgca 8062368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 102 - 147
Target Start/End: Complemental strand, 33048222 - 33048177
Alignment:
Q  102 aacaattatttattaaaaaattatatatttaatagaaaatacacaa 147  Q
    ||||||||||||||||||| |||||||||||||| |||||| ||||    
T  33048222 aacaattatttattaaaaagttatatatttaatataaaatatacaa 33048177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 101 - 213
Target Start/End: Original strand, 35512792 - 35512904
Alignment:
Q  101 caacaattatttattaaaaaattatatatttaatagaaaatacacaagtttcaatacaaacatactactttaaacttattaacgtatgcaaatttgcata 200  Q
    ||||| |||| |||| |||| || |||||||||||  ||||   |||||| ||||| |||  | ||| ||||||||| ||||| | |||||||||||| |    
T  35512792 caacatttatatattcaaaagttttatatttaatattaaatgtgcaagttccaatataaaatttctattttaaacttcttaacatgtgcaaatttgcaca 35512891  T
Q  201 tgatagaaaaacc 213  Q
    |||||||||||||    
T  35512892 tgatagaaaaacc 35512904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 101 - 213
Target Start/End: Complemental strand, 39310897 - 39310785
Alignment:
Q  101 caacaattatttattaaaaaattatatatttaatagaaaatacacaagtttcaatacaaacatactactttaaacttattaacgtatgcaaatttgcata 200  Q
    ||||||||||||||| |||| || |||| ||||||  ||||    || || |||||||||  | ||| ||||||||| ||||| | |||||||||||| |    
T  39310897 caacaattatttattcaaaagttttatacttaatattaaatgtgaaaattccaatacaaaatttctattttaaactttttaacatgtgcaaatttgcaca 39310798  T
Q  201 tgatagaaaaacc 213  Q
    |||||||||||||    
T  39310797 tgatagaaaaacc 39310785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 123 - 211
Target Start/End: Original strand, 42589261 - 42589349
Alignment:
Q  123 tatatatttaatagaaaatacacaagtttcaatacaaacatactactttaaacttattaacgtatgcaaatttgcatatgatagaaaaa 211  Q
    ||||||||||||  |||||||||||||| ||||| |||| ||||||||||   |  ||||| | |||||||||||| ||| ||||||||    
T  42589261 tatatatttaatgtaaaatacacaagttccaatataaacttactactttagtatccttaacatgtgcaaatttgcacatgttagaaaaa 42589349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 123 - 211
Target Start/End: Original strand, 44013014 - 44013102
Alignment:
Q  123 tatatatttaatagaaaatacacaagtttcaatacaaacatactactttaaacttattaacgtatgcaaatttgcatatgatagaaaaa 211  Q
    ||||||||||||  |||||||||||||| ||||| |||| ||||||||||   |  ||||| | |||||||||||| ||| ||||||||    
T  44013014 tatatatttaatgtaaaatacacaagttccaatataaacttactactttagtatccttaacatgtgcaaatttgcacatgttagaaaaa 44013102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 108 - 212
Target Start/End: Original strand, 47990046 - 47990148
Alignment:
Q  108 tatttattaaaaaattatatatttaatagaaaatacacaagtttcaatacaaacatactactttaaacttattaacgtatgcaaatttgcatatgataga 207  Q
    ||||||||||||| |||||||||||||  ||||| || |||||    ||||||| ||||| ||||| ||||||||| | || |||||||||||||||| |    
T  47990046 tatttattaaaaa-ttatatatttaatgtaaaatgcataagttatcgtacaaacttactattttaa-cttattaacatgtgtaaatttgcatatgatata 47990143  T
Q  208 aaaac 212  Q
    |||||    
T  47990144 aaaac 47990148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 105 - 160
Target Start/End: Complemental strand, 10096786 - 10096731
Alignment:
Q  105 aattatttattaaaaaattatatatttaatagaaaatacacaagtttcaatacaaa 160  Q
    |||| ||||||||||||||||||||||||||  ||||| |||||||| || |||||    
T  10096786 aattttttattaaaaaattatatatttaatattaaatagacaagttttaacacaaa 10096731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 101 - 134
Target Start/End: Original strand, 6520778 - 6520811
Alignment:
Q  101 caacaattatttattaaaaaattatatatttaat 134  Q
    |||||||||||||||||||||||| |||||||||    
T  6520778 caacaattatttattaaaaaattaaatatttaat 6520811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 101 - 213
Target Start/End: Original strand, 44918092 - 44918203
Alignment:
Q  101 caacaattatttattaaaaaattatatatttaatagaaaatacacaagtttcaatacaaacatactactttaaacttattaacgtatgcaaatttgcata 200  Q
    ||||||||||| |||||||  | | |||||||||| |||| ||| ||||| |||   |||  |||||||||||| || ||||| | || ||||||||| |    
T  44918092 caacaattattgattaaaagct-acatatttaatataaaaaacataagttccaaattaaagttactactttaaatttcttaacatgtgtaaatttgcaca 44918190  T
Q  201 tgatagaaaaacc 213  Q
    |||||||||||||    
T  44918191 tgatagaaaaacc 44918203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 57; Significance: 6e-24; HSPs: 61)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 101 - 213
Target Start/End: Original strand, 27019327 - 27019439
Alignment:
Q  101 caacaattatttattaaaaaattatatatttaatagaaaatacacaagtttcaatacaaacatactactttaaacttattaacgtatgcaaatttgcata 200  Q
    ||||||||||||||| |||| || |||||||||||  ||||  |||||||||||||||||  | ||| ||||||||| ||||| |||||||||||||| |    
T  27019327 caacaattatttattcaaaagttttatatttaatattaaatgtacaagtttcaatacaaaatttctattttaaactttttaacatatgcaaatttgcaca 27019426  T
Q  201 tgatagaaaaacc 213  Q
    |||||||||||||    
T  27019427 tgatagaaaaacc 27019439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 101 - 211
Target Start/End: Original strand, 55813931 - 55814041
Alignment:
Q  101 caacaattatttattaaaaaattatatatttaatagaaaatacacaagtttcaatacaaacatactactttaaacttattaacgtatgcaaatttgcata 200  Q
    |||||||||||||||||||| |||||||||||||| | |||  |||| ||||||||||||  || || ||||||||| ||||| | ||||||||||||||    
T  55813931 caacaattatttattaaaaagttatatatttaatacagaatgtacaaatttcaatacaaaattattattttaaactttttaacatgtgcaaatttgcata 55814030  T
Q  201 tgatagaaaaa 211  Q
    ||||| |||||    
T  55814031 tgatacaaaaa 55814041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 101 - 212
Target Start/End: Original strand, 2096938 - 2097049
Alignment:
Q  101 caacaattatttattaaaaaattatatatttaatagaaaatacacaagtttcaatacaaacatactactttaaacttattaacgtatgcaaatttgcata 200  Q
    |||||||||||||||||||| |||||||||||||| ||||| |||||||| |||||||||| ||| | ||| ||||| ||||| | ||||||||| || |    
T  2096938 caacaattatttattaaaaagttatatatttaatataaaatgcacaagttccaatacaaacttaccattttgaacttcttaacatgtgcaaattttcaca 2097037  T
Q  201 tgatagaaaaac 212  Q
     |||| ||||||    
T  2097038 ggataaaaaaac 2097049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 111 - 211
Target Start/End: Complemental strand, 49250437 - 49250336
Alignment:
Q  111 ttattaaaaa-attatatatttaatagaaaatacacaagtttcaatacaaacatactactttaaacttattaacgtatgcaaatttgcatatgatagaaa 209  Q
    |||||||||| | ||||||||||||  |||||||||||||||||||| |||| | |||||||||| || ||||| |||||||||||||| ||| ||||||    
T  49250437 ttattaaaaagaatatatatttaatgtaaaatacacaagtttcaatataaacttgctactttaaatttcttaacatatgcaaatttgcacatgttagaaa 49250338  T
Q  210 aa 211  Q
    ||    
T  49250337 aa 49250336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 101 - 213
Target Start/End: Complemental strand, 16069318 - 16069206
Alignment:
Q  101 caacaattatttattaaaaaattatatatttaatagaaaatacacaagtttcaatacaaacatactactttaaacttattaacgtatgcaaatttgcata 200  Q
    ||||||||||||||||||||| | |||||||||||  ||||  |||| |||||||||||| || ||| || |||||| ||||| | ||||||||||||||    
T  16069318 caacaattatttattaaaaaaatttatatttaatattaaatgtacaaatttcaatacaaaaattctatttaaaacttcttaacatgtgcaaatttgcata 16069219  T
Q  201 tgatagaaaaacc 213  Q
    ||| ||| |||||    
T  16069218 tgacagataaacc 16069206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 101 - 213
Target Start/End: Original strand, 19468261 - 19468373
Alignment:
Q  101 caacaattatttattaaaaaattatatatttaatagaaaatacacaagtttcaatacaaacatactactttaaacttattaacgtatgcaaatttgcata 200  Q
    ||||||||||||||| |||| || |||||||||||  ||||  |||||||||||||||||  | ||| ||||||||| ||||| | |||||||||||| |    
T  19468261 caacaattatttattcaaaagttttatatttaatattaaatgtacaagtttcaatacaaaatttctattttaaacttcttaacatgtgcaaatttgcaca 19468360  T
Q  201 tgatagaaaaacc 213  Q
    | |||||||||||    
T  19468361 taatagaaaaacc 19468373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 101 - 213
Target Start/End: Original strand, 49181139 - 49181251
Alignment:
Q  101 caacaattatttattaaaaaattatatatttaatagaaaatacacaagtttcaatacaaacatactactttaaacttattaacgtatgcaaatttgcata 200  Q
    ||||||| ||||||| |||| ||| |||||||||| ||||| |||||||| |||||||||  ||||| ||| ||||| |||||   |||||||||||| |    
T  49181139 caacaatcatttattgaaaagttacatatttaatataaaatgcacaagttacaatacaaatttactattttgaacttcttaacaggtgcaaatttgcaca 49181238  T
Q  201 tgatagaaaaacc 213  Q
    |||||||||||||    
T  49181239 tgatagaaaaacc 49181251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 101 - 213
Target Start/End: Original strand, 50352369 - 50352481
Alignment:
Q  101 caacaattatttattaaaaaattatatatttaatagaaaatacacaagtttcaatacaaacatactactttaaacttattaacgtatgcaaatttgcata 200  Q
    |||||||||||||  ||||| |||||||||||||| |||||   |||||| |||| ||||  ||||| |||||| || ||||| | ||||||||||||||    
T  50352369 caacaattatttaacaaaaagttatatatttaatacaaaatgttcaagttccaatgcaaaattactattttaaatttcttaacatgtgcaaatttgcata 50352468  T
Q  201 tgatagaaaaacc 213  Q
    |||||||||||||    
T  50352469 tgatagaaaaacc 50352481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 104 - 211
Target Start/End: Complemental strand, 51070504 - 51070399
Alignment:
Q  104 caattatttattaaaaaattatatatttaatagaaaatacacaagtttcaatacaaacatactactttaaacttattaacgtatgcaaatttgcatatga 203  Q
    |||| |||||||||||| |||||||||||||| |||||||||||||| ||| |||||| ||| | |||||| || ||||||  ||||||||| || ||||    
T  51070504 caatcatttattaaaaagttatatatttaatataaaatacacaagttacaaaacaaacttaccattttaaatttcttaacg--tgcaaattttcacatga 51070407  T
Q  204 tagaaaaa 211  Q
    ||||||||    
T  51070406 tagaaaaa 51070399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 117 - 213
Target Start/End: Original strand, 4329677 - 4329773
Alignment:
Q  117 aaaaattatatatttaatagaaaatacacaagtttcaatacaaacatactactttaaacttattaacgtatgcaaatttgcatatgatagaaaaacc 213  Q
    |||| ||| |||||||||| |||| ||| || ||||||  ||||  ||||||||||||||| ||||| |||||||||||||| ||||||||||||||    
T  4329677 aaaagttacatatttaatataaaaaacataaatttcaagtcaaagttactactttaaactttttaacatatgcaaatttgcacatgatagaaaaacc 4329773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 101 - 213
Target Start/End: Original strand, 17409891 - 17410003
Alignment:
Q  101 caacaattatttattaaaaaattatatatttaatagaaaatacacaagtttcaatacaaacatactactttaaacttattaacgtatgcaaatttgcata 200  Q
    ||||||||||||||| ||||| | |||||||||||  ||||  ||||||| |||||||||  | ||| ||||||||| ||| | | |||||||||||| |    
T  17409891 caacaattatttattcaaaaaatttatatttaatattaaatgtacaagttccaatacaaagtttctattttaaacttcttatcatgtgcaaatttgcaca 17409990  T
Q  201 tgatagaaaaacc 213  Q
    |||||||||||||    
T  17409991 tgatagaaaaacc 17410003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 101 - 213
Target Start/End: Complemental strand, 19451011 - 19450899
Alignment:
Q  101 caacaattatttattaaaaaattatatatttaatagaaaatacacaagtttcaatacaaacatactactttaaacttattaacgtatgcaaatttgcata 200  Q
    ||||||||||||||| |||| || |||||||||||  ||||  ||||||| |||||||||  | ||| ||||||||| ||||| | |||||||||||| |    
T  19451011 caacaattatttattcaaaagttttatatttaatattaaatgtacaagttccaatacaaaatttctattttaaacttcttaacatgtgcaaatttgcaca 19450912  T
Q  201 tgatagaaaaacc 213  Q
    | |||||||||||    
T  19450911 taatagaaaaacc 19450899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 101 - 213
Target Start/End: Original strand, 34941345 - 34941457
Alignment:
Q  101 caacaattatttattaaaaaattatatatttaatagaaaatacacaagtttcaatacaaacatactactttaaacttattaacgtatgcaaatttgcata 200  Q
    |||||| ||||||||||||| ||||||||| |||| |||||  ||||||| |||| ||||  ||||| ||||||||| ||| | | |||||||| ||| |    
T  34941345 caacaactatttattaaaaagttatatattaaatacaaaatgtacaagttccaatgcaaaattactattttaaacttcttatcatgtgcaaattcgcaca 34941444  T
Q  201 tgatagaaaaacc 213  Q
    |||||||||||||    
T  34941445 tgatagaaaaacc 34941457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 101 - 213
Target Start/End: Complemental strand, 41415667 - 41415556
Alignment:
Q  101 caacaattatttattaaaaaattatatatttaatagaaaatacacaagtttcaatacaaacatactactttaaacttattaacgtatgcaaatttgcata 200  Q
    |||||||||||||||||||  | | |||||||||| |||| |||||| ||||||  ||||  ||||||||||||||||||| | | |||||||||||| |    
T  41415667 caacaattatttattaaaagct-acatatttaatataaaaaacacaaatttcaagtcaaagttactactttaaacttattatcatgtgcaaatttgcaca 41415569  T
Q  201 tgatagaaaaacc 213  Q
    ||||| |||||||    
T  41415568 tgatataaaaacc 41415556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 101 - 212
Target Start/End: Original strand, 23545543 - 23545654
Alignment:
Q  101 caacaattatttattaaaaaattatatatttaatagaaaatacacaagtttcaatacaaacatactactttaaacttattaacgtatgcaaatttgcata 200  Q
    ||||||||||||||| |||| || |||||||||||  ||||  |||| || |||||||||  |  || ||||||||||||||| | |||||||||||| |    
T  23545543 caacaattatttattcaaaagttttatatttaatattaaatgtacaatttccaatacaaaatttatattttaaacttattaacatgtgcaaatttgcaca 23545642  T
Q  201 tgatagaaaaac 212  Q
    ||||||||||||    
T  23545643 tgatagaaaaac 23545654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 101 - 160
Target Start/End: Original strand, 38222353 - 38222412
Alignment:
Q  101 caacaattatttattaaaaaattatatatttaatagaaaatacacaagtttcaatacaaa 160  Q
    ||||||||||||||||||||||||||||||||||| ||||| ||||| ||| ||||||||    
T  38222353 caacaattatttattaaaaaattatatatttaatataaaatccacaaattttaatacaaa 38222412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 101 - 211
Target Start/End: Complemental strand, 16667495 - 16667385
Alignment:
Q  101 caacaattatttattaaaaaattatatatttaatagaaaatacacaagtttcaatacaaacatactactttaaacttattaacgtatgcaaatttgcata 200  Q
    ||||| ||||||||||||||  || |||||||||| ||||||||||||||||||   |||  ||  | ||||||||| ||||| | |||||||||||| |    
T  16667495 caacacttatttattaaaaagctacatatttaatataaaatacacaagtttcaagttaaaattatcattttaaacttcttaacatgtgcaaatttgcaca 16667396  T
Q  201 tgatagaaaaa 211  Q
    |||||||||||    
T  16667395 tgatagaaaaa 16667385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 103 - 213
Target Start/End: Complemental strand, 23051490 - 23051381
Alignment:
Q  103 acaattatttattaaaaaattatatatttaatagaaaatacacaagtttcaatacaaacatactactttaaacttattaacgtatgcaaatttgcatatg 202  Q
    |||||||||||||||||  ||| |||||| ||| |||| |||||||||||||  ||||  |||||||||||| || ||| | | |||||||||||| |||    
T  23051490 acaattatttattaaaag-ttacatattttatataaaaaacacaagtttcaagtcaaagttactactttaaatttcttatcatgtgcaaatttgcacatg 23051392  T
Q  203 atagaaaaacc 213  Q
    |||||||||||    
T  23051391 atagaaaaacc 23051381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 101 - 211
Target Start/End: Original strand, 52391365 - 52391475
Alignment:
Q  101 caacaattatttattaaaaaattatatatttaatagaaaatacacaagtttcaatacaaacatactactttaaacttattaacgtatgcaaatttgcata 200  Q
    ||||||||||||||| |||| || |||||||||||  ||||  ||||||| |||||||||  | ||| ||||||||| ||||| | ||||||||| || |    
T  52391365 caacaattatttattcaaaagttttatatttaatattaaatgtacaagttccaatacaaaatttctattttaaacttcttaacatgtgcaaatttacaca 52391464  T
Q  201 tgatagaaaaa 211  Q
    |||||||||||    
T  52391465 tgatagaaaaa 52391475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 102 - 147
Target Start/End: Original strand, 33559269 - 33559314
Alignment:
Q  102 aacaattatttattaaaaaattatatatttaatagaaaatacacaa 147  Q
    |||||||||||||||||||||||||||||||||| |||||||||||    
T  33559269 aacaattatttattaaaaaattatatatttaatataaaatacacaa 33559314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 107 - 212
Target Start/End: Complemental strand, 47326997 - 47326892
Alignment:
Q  107 ttatttattaaaaaattatatatttaatagaaaatacacaagtttcaatacaaacatactactttaaacttattaacgtatgcaaatttgcatatgatag 206  Q
    ||||||||||||||| || ||||||||||  |||| || ||||| |||  ||||  ||| ||||||||||| ||||| | |||||||||||| |||||||    
T  47326997 ttatttattaaaaaactacatatttaatatgaaatgcaaaagttccaagtcaaagttaccactttaaacttcttaacatgtgcaaatttgcacatgatag 47326898  T
Q  207 aaaaac 212  Q
    ||||||    
T  47326897 aaaaac 47326892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 107 - 212
Target Start/End: Complemental strand, 47341793 - 47341688
Alignment:
Q  107 ttatttattaaaaaattatatatttaatagaaaatacacaagtttcaatacaaacatactactttaaacttattaacgtatgcaaatttgcatatgatag 206  Q
    ||||||||||||||| || ||||||||||  |||| || ||||| |||  ||||  ||| ||||||||||| ||||| | |||||||||||| |||||||    
T  47341793 ttatttattaaaaaactacatatttaatatgaaatgcaaaagttccaagtcaaagttaccactttaaacttcttaacatgtgcaaatttgcacatgatag 47341694  T
Q  207 aaaaac 212  Q
    ||||||    
T  47341693 aaaaac 47341688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 101 - 213
Target Start/End: Complemental strand, 53376520 - 53376407
Alignment:
Q  101 caacaattatttattaaaaaattatat-atttaatagaaaatacacaagtttcaatacaaacatactactttaaacttattaacgtatgcaaatttgcat 199  Q
    ||||||| |||||||||||| |||||| |||||||| ||||| |||| |||| ||||||||| |  || ||||||||| ||||| | ||||||||| ||     
T  53376520 caacaatcatttattaaaaagttatataatttaatataaaatgcacaggttttaatacaaacttcttattttaaacttcttaacatgtgcaaattttcac 53376421  T
Q  200 atgatagaaaaacc 213  Q
    |||||| |||||||    
T  53376420 atgataaaaaaacc 53376407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 101 - 209
Target Start/End: Original strand, 24684904 - 24685012
Alignment:
Q  101 caacaattatttattaaaaaattatatatttaatagaaaatacacaagtttcaatacaaacatactactttaaacttattaacgtatgcaaatttgcata 200  Q
    ||||||||||||||| |||| || |||||||||||  ||||  ||||||| |||| ||||  | ||| ||||||||| ||||| | |||||||||||| |    
T  24684904 caacaattatttattcaaaagttttatatttaatattaaatgtacaagttccaatgcaaaatttctattttaaacttcttaacatgtgcaaatttgcaca 24685003  T
Q  201 tgatagaaa 209  Q
    |||||||||    
T  24685004 tgatagaaa 24685012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 101 - 213
Target Start/End: Complemental strand, 33632313 - 33632202
Alignment:
Q  101 caacaattatttattaaaaaattatatatttaatagaaaatacacaagtttcaatacaaacatactactttaaacttattaacgtatgcaaatttgcata 200  Q
    ||||||||||||||| |||| || |||||||||||  ||||  ||||||||||||| |||  | ||| ||||||||| ||||| | |||||||| ||| |    
T  33632313 caacaattatttattcaaaagttttatatttaatattaaatgtacaagtttcaatataaa-tttctattttaaactttttaacatgtgcaaattcgcaca 33632215  T
Q  201 tgatagaaaaacc 213  Q
    |||||||||||||    
T  33632214 tgatagaaaaacc 33632202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 101 - 213
Target Start/End: Original strand, 40049625 - 40049737
Alignment:
Q  101 caacaattatttattaaaaaattatatatttaatagaaaatacacaagtttcaatacaaacatactactttaaacttattaacgtatgcaaatttgcata 200  Q
    |||||||||||||  |||||||||||||||||||| |||||    ||||| |||| ||||  ||||| |||||| || ||||| | |||||||||||| |    
T  40049625 caacaattatttaacaaaaaattatatatttaataaaaaatgttaaagttccaatgcaaaattactattttaaatttcttaacatgtgcaaatttgcaca 40049724  T
Q  201 tgatagaaaaacc 213  Q
    | |||||||||||    
T  40049725 taatagaaaaacc 40049737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 163 - 211
Target Start/End: Complemental strand, 48910851 - 48910803
Alignment:
Q  163 tactactttaaacttattaacgtatgcaaatttgcatatgatagaaaaa 211  Q
    ||||||||||||||| ||||| |||||||||||||||||||||||||||    
T  48910851 tactactttaaacttcttaacatatgcaaatttgcatatgatagaaaaa 48910803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 105 - 213
Target Start/End: Original strand, 51691412 - 51691520
Alignment:
Q  105 aattatttattaaaaaattatatatttaatagaaaatacacaagtttcaatacaaacatactactttaaacttattaacgtatgcaaatttgcatatgat 204  Q
    ||||||||||||||||  ||||||||||||  |||||| ||||||| |||| ||||  ||||| || ||| || ||||| | ||||||||| || |||||    
T  51691412 aattatttattaaaaagctatatatttaattcaaaatatacaagttccaatgcaaagttactatttaaaatttcttaacatgtgcaaatttacacatgat 51691511  T
Q  205 agaaaaacc 213  Q
    |||||||||    
T  51691512 agaaaaacc 51691520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 101 - 212
Target Start/End: Complemental strand, 4779547 - 4779436
Alignment:
Q  101 caacaattatttattaaaaaattatatatttaatagaaaatacacaagtttcaatacaaacatactactttaaacttattaacgtatgcaaatttgcata 200  Q
    ||||||||||||||| |||||||||||||||| || |||||  | || ||||||| ||||  | | | | ||||||| ||||| | |||||||||||| |    
T  4779547 caacaattatttatttaaaaattatatatttattacaaaatgtataaatttcaatgcaaaatttcaattataaacttcttaacatgtgcaaatttgcaca 4779448  T
Q  201 tgatagaaaaac 212  Q
    ||||||||||||    
T  4779447 tgatagaaaaac 4779436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 111 - 213
Target Start/End: Original strand, 27756638 - 27756740
Alignment:
Q  111 ttattaaaaaattatatatttaatagaaaatacacaagtttcaatacaaacatactactttaaacttattaacgtatgcaaatttgcatatgatagaaaa 210  Q
    |||||||||| |||| ||||||||| | |||| ||||||||||| |||||| | |||||||||| || ||||| | || ||||||| | |||||| ||||    
T  27756638 ttattaaaaagttatctatttaatatagaatatacaagtttcaagacaaacttgctactttaaatttcttaacatttgtaaatttgtacatgataaaaaa 27756737  T
Q  211 acc 213  Q
    |||    
T  27756738 acc 27756740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 107 - 213
Target Start/End: Complemental strand, 54495742 - 54495636
Alignment:
Q  107 ttatttattaaaaaattatatatttaatagaaaatacacaagtttcaatacaaacatactactttaaacttattaacgtatgcaaatttgcatatgatag 206  Q
    ||||||||||||||  || ||||||||||  |||| |||||||| |||   |||  ||| ||||||||||| ||||| | |||||||||||| |||||||    
T  54495742 ttatttattaaaaagctacatatttaatatgaaatgcacaagttccaagttaaagttaccactttaaacttcttaacatgtgcaaatttgcacatgatag 54495643  T
Q  207 aaaaacc 213  Q
    |||||||    
T  54495642 aaaaacc 54495636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 101 - 213
Target Start/End: Original strand, 7349756 - 7349867
Alignment:
Q  101 caacaattatttattaaaaaattatatatttaatagaaaatacacaagtttcaatacaaacatactactttaaacttattaacgtatgcaaatttgcata 200  Q
    |||||||||||| ||||||  ||| |||||||||| |||| |||||||||| ||  ||||  ||||||||||||||| ||| | | | ||||||| || |    
T  7349756 caacaattatttgttaaaag-ttacatatttaatataaaaaacacaagttttaagtcaaagttactactttaaacttcttatcatgtacaaatttacaca 7349854  T
Q  201 tgatagaaaaacc 213  Q
    |||||||||||||    
T  7349855 tgatagaaaaacc 7349867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 101 - 213
Target Start/End: Complemental strand, 9759253 - 9759141
Alignment:
Q  101 caacaattatttattaaaaaattatatatttaatagaaaatacacaagtttcaatacaaacatactactttaaacttattaacgtatgcaaatttgcata 200  Q
    |||||||||||||  ||||| |||||||||||||| |||||   ||| || |||| ||||  ||||| |||||| || ||||| | |||||||||| | |    
T  9759253 caacaattatttaacaaaaagttatatatttaatacaaaatgttcaacttccaatgcaaagttactattttaaatttcttaacatgtgcaaatttgtaca 9759154  T
Q  201 tgatagaaaaacc 213  Q
    |||||||||||||    
T  9759153 tgatagaaaaacc 9759141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 101 - 177
Target Start/End: Original strand, 33288275 - 33288351
Alignment:
Q  101 caacaattatttattaaaaaattatatatttaatagaaaatacacaagtttcaatacaaacatactactttaaactt 177  Q
    |||||||||||| |||||||||||| ||||||||| |||||  |||||||| |||| |||  ||||| |||||||||    
T  33288275 caacaattatttgttaaaaaattatgtatttaatacaaaatgtacaagttttaatataaatttactattttaaactt 33288351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 101 - 213
Target Start/End: Original strand, 39876897 - 39877009
Alignment:
Q  101 caacaattatttattaaaaaattatatatttaatagaaaatacacaagtttcaatacaaacatactactttaaacttattaacgtatgcaaatttgcata 200  Q
    |||||||||||||  ||||| |||||||||| ||| |||||   |||||| |||| ||||  ||||| |||||| || ||||| | ||||||||| || |    
T  39876897 caacaattatttaacaaaaagttatatatttgatacaaaatgttcaagttccaatgcaaagttactattttaaatttcttaacatgtgcaaatttacaca 39876996  T
Q  201 tgatagaaaaacc 213  Q
    |||||||||||||    
T  39876997 tgatagaaaaacc 39877009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 123 - 211
Target Start/End: Complemental strand, 41887658 - 41887570
Alignment:
Q  123 tatatatttaatagaaaatacacaagtttcaatacaaacatactactttaaacttattaacgtatgcaaatttgcatatgatagaaaaa 211  Q
    ||||||||||||  |||||||||||||||||||| |||| ||||||||||   |  ||||| | |||||||||||| ||| ||||||||    
T  41887658 tatatatttaatgtaaaatacacaagtttcaatataaacttactactttagtatccttaacatgtgcaaatttgcacatgttagaaaaa 41887570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 126 - 213
Target Start/End: Complemental strand, 29190902 - 29190815
Alignment:
Q  126 atatttaatagaaaatacacaagtttcaatacaaacatactactttaaacttattaacgtatgcaaatttgcatatgatagaaaaacc 213  Q
    ||||||||||  ||| ||||||||| |||  ||||  ||||| ||||||||| ||||| | |||||||||||| ||||||||||||||    
T  29190902 atatttaatattaaaaacacaagttccaagtcaaagttactaatttaaacttcttaacatgtgcaaatttgcacatgatagaaaaacc 29190815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 102 - 212
Target Start/End: Complemental strand, 10658527 - 10658417
Alignment:
Q  102 aacaattatttattaaaaaattatatatttaatagaaaatacacaagtttcaatacaaacatactactttaaacttattaacgtatgcaaatttgcatat 201  Q
    ||||||||||||  ||||| |||||||||||||| |||||   |||||||||||  |||  ||||| |||||| || ||||| | |||||||| ||| ||    
T  10658527 aacaattatttaacaaaaagttatatatttaatacaaaatgttcaagtttcaatgtaaagttactattttaaattttttaacatgtgcaaattagcacat 10658428  T
Q  202 gatagaaaaac 212  Q
    |||| ||||||    
T  10658427 gataaaaaaac 10658417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 163 - 213
Target Start/End: Complemental strand, 10813543 - 10813493
Alignment:
Q  163 tactactttaaacttattaacgtatgcaaatttgcatatgatagaaaaacc 213  Q
    ||||||||||||||||||| | ||||||||| |||| ||||||||||||||    
T  10813543 tactactttaaacttattatcatatgcaaatctgcacatgatagaaaaacc 10813493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 102 - 212
Target Start/End: Complemental strand, 10872672 - 10872562
Alignment:
Q  102 aacaattatttattaaaaaattatatatttaatagaaaatacacaagtttcaatacaaacatactactttaaacttattaacgtatgcaaatttgcatat 201  Q
    ||||||||||||  ||||| |||||||||||||| |||||   |||||||||||  |||  ||||| |||||| || ||||| | |||||||| ||| ||    
T  10872672 aacaattatttaacaaaaagttatatatttaatacaaaatgttcaagtttcaatgtaaagttactattttaaattttttaacatgtgcaaattagcacat 10872573  T
Q  202 gatagaaaaac 212  Q
    |||| ||||||    
T  10872572 gataaaaaaac 10872562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 127 - 213
Target Start/End: Complemental strand, 18882352 - 18882266
Alignment:
Q  127 tatttaatagaaaatacacaagtttcaatacaaacatactactttaaacttattaacgtatgcaaatttgcatatgatagaaaaacc 213  Q
    |||||||||  ||||  ||||||| |||||||||  | ||| ||||||||| ||||| | |||||||||||| ||||||||||||||    
T  18882352 tatttaatattaaatgtacaagttccaatacaaaatttctattttaaacttcttaacatgtgcaaatttgcacatgatagaaaaacc 18882266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 101 - 211
Target Start/End: Original strand, 23553638 - 23553747
Alignment:
Q  101 caacaattatttattaaaaaattatatatttaatagaaaatacacaagtttcaatacaaacatactactttaaacttattaacgtatgcaaatttgcata 200  Q
    ||||||||||| |||||||| | | |||||||||| |||| | |||| ||| ||   |||  ||||||||||||||| ||||| | |||||||||||| |    
T  23553638 caacaattattgattaaaaact-acatatttaatataaaaaatacaaattttaagttaaagttactactttaaactttttaacatgtgcaaatttgcaca 23553736  T
Q  201 tgatagaaaaa 211  Q
    |||||||||||    
T  23553737 tgatagaaaaa 23553747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 107 - 213
Target Start/End: Original strand, 27362464 - 27362570
Alignment:
Q  107 ttatttattaaaaaattatatatttaatagaaaatacacaagtttcaatacaaacatactactttaaacttattaacgtatgcaaatttgcatatgatag 206  Q
    |||||||| |||||  || ||||||||||  |||| ||||| || |||  ||||  ||| ||||||||||| ||||| | |||||||||||| |||||||    
T  27362464 ttatttatcaaaaagctacatatttaatatgaaatgcacaaattccaagtcaaaattaccactttaaacttcttaacatgtgcaaatttgcacatgatag 27362563  T
Q  207 aaaaacc 213  Q
    |||||||    
T  27362564 aaaaacc 27362570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 163 - 213
Target Start/End: Complemental strand, 35999996 - 35999946
Alignment:
Q  163 tactactttaaacttattaacgtatgcaaatttgcatatgatagaaaaacc 213  Q
    ||||||||||||||| ||||| | |||||||||||| ||||||||||||||    
T  35999996 tactactttaaacttcttaacatgtgcaaatttgcacatgatagaaaaacc 35999946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 105 - 147
Target Start/End: Complemental strand, 39796226 - 39796184
Alignment:
Q  105 aattatttattaaaaaattatatatttaatagaaaatacacaa 147  Q
    |||||||||||||||| |||||||||||||| |||||||||||    
T  39796226 aattatttattaaaaatttatatatttaatataaaatacacaa 39796184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 126 - 212
Target Start/End: Original strand, 53961414 - 53961500
Alignment:
Q  126 atatttaatagaaaatacacaagtttcaatacaaacatactactttaaacttattaacgtatgcaaatttgcatatgatagaaaaac 212  Q
    |||||||||| |||| |||||| ||||||  ||||  ||||| ||||||||| ||||| | |||||||||||| | |||||||||||    
T  53961414 atatttaatataaaaaacacaaatttcaagtcaaaattactaatttaaacttcttaacatgtgcaaatttgcacacgatagaaaaac 53961500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 101 - 167
Target Start/End: Complemental strand, 54506529 - 54506463
Alignment:
Q  101 caacaattatttattaaaaaattatatatttaatagaaaatacacaagtttcaatacaaacatacta 167  Q
    ||||||| |||| |||||||||| ||||||||||| |||||| ||| |||||||| ||||| |||||    
T  54506529 caacaatcatttgttaaaaaattgtatatttaatacaaaatatacatgtttcaatgcaaacttacta 54506463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 101 - 198
Target Start/End: Complemental strand, 37432977 - 37432880
Alignment:
Q  101 caacaattatttattaaaaaattatatatttaatagaaaatacacaagtttcaatacaaacatactactttaaacttattaacgtatgcaaatttgca 198  Q
    ||||||||||||||| ||||||| |||||||| ||  ||||  |||| ||||||||||||  |  || ||||||||| ||||| ||||||| ||||||    
T  37432977 caacaattatttatttaaaaattttatatttagtattaaatgtacaaatttcaatacaaaatttttattttaaacttcttaacatatgcaagtttgca 37432880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 123 - 211
Target Start/End: Original strand, 32459419 - 32459507
Alignment:
Q  123 tatatatttaatagaaaatacacaagtttcaatacaaacatactactttaaacttattaacgtatgcaaatttgcatatgatagaaaaa 211  Q
    ||||||||||||  |||||||||||||| ||||| |||| ||||||||||   |  ||||| | |||||||||||| ||| ||||||||    
T  32459419 tatatatttaatgtaaaatacacaagttccaatataaacttactactttagtatccttaacatgtgcaaatttgcacatgttagaaaaa 32459507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 104 - 151
Target Start/End: Original strand, 6875571 - 6875618
Alignment:
Q  104 caattatttattaaaaaattatatatttaatagaaaatacacaagttt 151  Q
    |||||||||||| |||| ||||| |||||||| |||||||||||||||    
T  6875571 caattatttattgaaaagttataaatttaatataaaatacacaagttt 6875618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 101 - 212
Target Start/End: Complemental strand, 19838802 - 19838691
Alignment:
Q  101 caacaattatttattaaaaaattatatatttaatagaaaatacacaagtttcaatacaaacatactactttaaacttattaacgtatgcaaatttgcata 200  Q
    ||||||||||||||| |||| || |||||||||||  ||||  ||||||| |||||||||  | ||| |||||||   ||||| | ||||||||| || |    
T  19838802 caacaattatttattcaaaagttttatatttaatattaaatgtacaagttccaatacaaaatttctattttaaacgggttaacatgtgcaaattttcaca 19838703  T
Q  201 tgatagaaaaac 212  Q
    ||||| ||||||    
T  19838702 tgataaaaaaac 19838691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 102 - 141
Target Start/End: Complemental strand, 35645111 - 35645072
Alignment:
Q  102 aacaattatttattaaaaaattatatatttaatagaaaat 141  Q
    ||||||||||||||||||| |||||||||||||| |||||    
T  35645111 aacaattatttattaaaaagttatatatttaatataaaat 35645072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 109 - 144
Target Start/End: Complemental strand, 46607600 - 46607565
Alignment:
Q  109 atttattaaaaaattatatatttaatagaaaataca 144  Q
    ||||||||||||||||||||||||||| ||||||||    
T  46607600 atttattaaaaaattatatatttaatataaaataca 46607565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 122 - 213
Target Start/End: Original strand, 25843380 - 25843473
Alignment:
Q  122 ttatatatttaatagaaaatacacaa--gtttcaatacaaacatactactttaaacttattaacgtatgcaaatttgcatatgatagaaaaacc 213  Q
    |||||||||||||| ||||| |||||  |||  || |||||  ||||||||||||||| ||||| | | ||||||||||  |||||||||||||    
T  25843380 ttatatatttaatataaaatgcacaaaagttctaagacaaagttactactttaaactttttaacatctacaaatttgcacgtgatagaaaaacc 25843473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 122 - 160
Target Start/End: Original strand, 25938942 - 25938980
Alignment:
Q  122 ttatatatttaatagaaaatacacaagtttcaatacaaa 160  Q
    |||||||||||||||||||||||||||||  ||||||||    
T  25938942 ttatatatttaatagaaaatacacaagttctaatacaaa 25938980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 105 - 182
Target Start/End: Original strand, 41970454 - 41970531
Alignment:
Q  105 aattatttattaaaaaattatatatttaatagaaaatacacaagtttcaatacaaacatactactttaaacttattaa 182  Q
    ||||||||| |||||  ||||||  |||||| |||||||  |||||||||||||||  ||||| ||||||||| ||||    
T  41970454 aattatttactaaaatgttatattattaatataaaatacgtaagtttcaatacaaaattactattttaaactttttaa 41970531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 123 - 172
Target Start/End: Complemental strand, 43759556 - 43759507
Alignment:
Q  123 tatatatttaatagaaaatacacaagtttcaatacaaacatactacttta 172  Q
    ||||||||||||  |||||||||||||| ||||| |||| ||||||||||    
T  43759556 tatatatttaatgtaaaatacacaagttccaatataaacttactacttta 43759507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 105 - 174
Target Start/End: Complemental strand, 44571636 - 44571567
Alignment:
Q  105 aattatttattaaaaaattatatatttaatagaaaatacacaagtttcaatacaaacatactactttaaa 174  Q
    ||||| |||||||||| |||||||||||||| |||||  | |||||  ||||||||  ||||||||||||    
T  44571636 aattacttattaaaaatttatatatttaatataaaatgtataagttcaaatacaaatctactactttaaa 44571567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 104 - 212
Target Start/End: Original strand, 1378088 - 1378195
Alignment:
Q  104 caattatttattaaaaaattatatatttaatagaaaatacacaagtttcaatacaaacatactactttaaacttattaacgtatgcaaatttgcatatga 203  Q
    ||||||||||||||||  ||||||||||||||  ||||  ||||||||||| | |||  ||| | |||||| || ||||| | |||||| |||||  |||    
T  1378088 caattatttattaaaatgttatatatttaatattaaatgtacaagtttcaagataaatttaccattttaaatttcttaacatgtgcaaa-ttgcacctga 1378186  T
Q  204 tagaaaaac 212  Q
    |||||||||    
T  1378187 tagaaaaac 1378195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 137 - 213
Target Start/End: Original strand, 49228757 - 49228833
Alignment:
Q  137 aaaatacacaagtttcaatacaaacatactactttaaacttattaacgtatgcaaatttgcatatgatagaaaaacc 213  Q
    |||| ||||||||| |||  ||||  ||||| ||||||||| |||||   |||||||||||| ||||||||||||||    
T  49228757 aaaaaacacaagttccaagtcaaagttactaatttaaacttcttaacacgtgcaaatttgcacatgatagaaaaacc 49228833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 101 - 160
Target Start/End: Complemental strand, 51268729 - 51268667
Alignment:
Q  101 caacaattatttattaaaaaatta---tatatttaatagaaaatacacaagtttcaatacaaa 160  Q
    |||||||||||||||| |||||||   ||||||| ||| ||||| |||||||||| |||||||    
T  51268729 caacaattatttattagaaaattatactatattttatataaaatgcacaagtttcgatacaaa 51268667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0305 (Bit Score: 56; Significance: 2e-23; HSPs: 2)
Name: scaffold0305
Description:

Target: scaffold0305; HSP #1
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 101 - 212
Target Start/End: Complemental strand, 18107 - 17996
Alignment:
Q  101 caacaattatttattaaaaaattatatatttaatagaaaatacacaagtttcaatacaaacatactactttaaacttattaacgtatgcaaatttgcata 200  Q
    |||||||||||||||| ||| |||||||||||||| |||||  |||| || |||||||||||||||| ||| ||| | |||||   ||||||||||||||    
T  18107 caacaattatttattagaaagttatatatttaatataaaatgtacaaattccaatacaaacatactattttgaacattttaacacgtgcaaatttgcata 18008  T
Q  201 tgatagaaaaac 212  Q
    ||||||||||||    
T  18007 tgatagaaaaac 17996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0305; HSP #2
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 102 - 212
Target Start/End: Complemental strand, 17898 - 17788
Alignment:
Q  102 aacaattatttattaaaaaattatatatttaatagaaaatacacaagtttcaatacaaacatactactttaaacttattaacgtatgcaaatttgcatat 201  Q
    ||||||||||||||||||| |||||| ||||||| |||||  ||||||| ||||| |||  ||||| ||| |||||| |||| | |||||||||||| ||    
T  17898 aacaattatttattaaaaatttatatctttaatacaaaatgtacaagttccaatataaagttactatttttaacttaataacatgtgcaaatttgcaaat 17799  T
Q  202 gatagaaaaac 212  Q
     ||||||||||    
T  17798 tatagaaaaac 17788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 56; Significance: 2e-23; HSPs: 40)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 101 - 212
Target Start/End: Complemental strand, 15241061 - 15240950
Alignment:
Q  101 caacaattatttattaaaaaattatatatttaatagaaaatacacaagtttcaatacaaacatactactttaaacttattaacgtatgcaaatttgcata 200  Q
    ||||||||||||||||||||||||||||||||||| || || ||||| ||||||||||||  || || ||| ||||| ||||| | | |||||||||| |    
T  15241061 caacaattatttattaaaaaattatatatttaatataacatgcacaaatttcaatacaaatttaatattttgaactttttaacatgtacaaatttgcaca 15240962  T
Q  201 tgatagaaaaac 212  Q
    ||||||||||||    
T  15240961 tgatagaaaaac 15240950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 101 - 213
Target Start/End: Original strand, 2795591 - 2795702
Alignment:
Q  101 caacaattatttattaaaaaattatatatttaatagaaaatacacaagtttcaatacaaacatactactttaaacttattaacgtatgcaaatttgcata 200  Q
    ||||||||||| |||||||  ||| |||||||||| |||| ||||||||| |||  ||||  ||||||||||||||| ||||| | |||||||||||| |    
T  2795591 caacaattattgattaaaag-ttacatatttaatacaaaaaacacaagttccaagtcaaagttactactttaaacttcttaacatgtgcaaatttgcaca 2795689  T
Q  201 tgatagaaaaacc 213  Q
    |||||||||||||    
T  2795690 tgatagaaaaacc 2795702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 101 - 213
Target Start/End: Original strand, 6863623 - 6863735
Alignment:
Q  101 caacaattatttattaaaaaattatatatttaatagaaaatacacaagtttcaatacaaacatactactttaaacttattaacgtatgcaaatttgcata 200  Q
    ||||||||||||| |||||| |||||||||||||| |||||   |||||| ||||| |||  ||||| |||||| || ||||| | |||||||||||| |    
T  6863623 caacaattatttaataaaaagttatatatttaatacaaaatgttcaagttccaatataaagttactattttaaattttttaacatgtgcaaatttgcaca 6863722  T
Q  201 tgatagaaaaacc 213  Q
    |||||||||||||    
T  6863723 tgatagaaaaacc 6863735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 101 - 213
Target Start/End: Original strand, 11636799 - 11636910
Alignment:
Q  101 caacaattatttattaaaaaattatatatttaatagaaaatacacaagtttcaatacaaacatactactttaaacttattaacgtatgcaaatttgcata 200  Q
    ||||||||| |||||||||| ||| |||||||||| ||| | ||||||||||||  ||||  ||||||||||||||| ||| | | |||||||||||| |    
T  11636799 caacaattaattattaaaaatttacatatttaatataaa-tgcacaagtttcaagtcaaagttactactttaaacttcttatcatgtgcaaatttgcaca 11636897  T
Q  201 tgatagaaaaacc 213  Q
    |||||||||||||    
T  11636898 tgatagaaaaacc 11636910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 105 - 213
Target Start/End: Original strand, 35151290 - 35151398
Alignment:
Q  105 aattatttattaaaaaattatatatttaatagaaaatacacaagtttcaatacaaacatactactttaaacttattaacgtatgcaaatttgcatatgat 204  Q
    |||||||||||||||||||||  |||||||  ||||| |||||||| ||||  |||  ||||| ||||||||| ||||| |||||||||||||| |||||    
T  35151290 aattatttattaaaaaattattcatttaatttaaaatgcacaagttacaatgtaaatttactattttaaactttttaacatatgcaaatttgcacatgat 35151389  T
Q  205 agaaaaacc 213  Q
     ||||||||    
T  35151390 tgaaaaacc 35151398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 105 - 213
Target Start/End: Original strand, 3398291 - 3398399
Alignment:
Q  105 aattatttattaaaaaattatatatttaatagaaaatacacaagtttcaatacaaacatactactttaaacttattaacgtatgcaaatttgcatatgat 204  Q
    ||||||||||| |||| || |||||||||||  ||||  ||||||| |||||||||  | ||| ||||||||| ||||| | |||||||||||| |||||    
T  3398291 aattatttatttaaaagttttatatttaatattaaatgtacaagttccaatacaaaatttctattttaaacttcttaacatgtgcaaatttgcacatgat 3398390  T
Q  205 agaaaaacc 213  Q
    |||||||||    
T  3398391 agaaaaacc 3398399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 101 - 213
Target Start/End: Complemental strand, 8103691 - 8103579
Alignment:
Q  101 caacaattatttattaaaaaattatatatttaatagaaaatacacaagtttcaatacaaacatactactttaaacttattaacgtatgcaaatttgcata 200  Q
    ||||||||| ||||||||||  || ||| |||||| ||||| |||||||| |||  ||||  ||||||||||||||| ||| | | |||||||||||| |    
T  8103691 caacaattaattattaaaaatctacataattaatataaaatgcacaagttccaagtcaaagttactactttaaacttcttatcatgtgcaaatttgcaca 8103592  T
Q  201 tgatagaaaaacc 213  Q
    |||||||||||||    
T  8103591 tgatagaaaaacc 8103579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 101 - 213
Target Start/End: Complemental strand, 18841816 - 18841704
Alignment:
Q  101 caacaattatttattaaaaaattatatatttaatagaaaatacacaagtttcaatacaaacatactactttaaacttattaacgtatgcaaatttgcata 200  Q
    ||||||||||||||| |||| || |||||||||||  ||||  |||| ||||||||||||  | ||| ||||||||| ||||| |||||||||||||| |    
T  18841816 caacaattatttattcaaaagttttatatttaatattaaatgtacaaatttcaatacaaaatttctattttaaactttttaacatatgcaaatttgcaca 18841717  T
Q  201 tgatagaaaaacc 213  Q
     |||| |||||||    
T  18841716 cgataaaaaaacc 18841704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 101 - 213
Target Start/End: Original strand, 30839848 - 30839960
Alignment:
Q  101 caacaattatttattaaaaaattatatatttaatagaaaatacacaagtttcaatacaaacatactactttaaacttattaacgtatgcaaatttgcata 200  Q
    |||||||||||||  ||||| |||||||||||||| |||||   |||||| |||| ||||  ||||| |||||| || ||||| | |||||||||||| |    
T  30839848 caacaattatttaacaaaaagttatatatttaatacaaaatgttcaagttccaatgcaaagttactattttaaatttcttaacatgtgcaaatttgcaca 30839947  T
Q  201 tgatagaaaaacc 213  Q
    |||||||||||||    
T  30839948 tgatagaaaaacc 30839960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 101 - 213
Target Start/End: Original strand, 36597646 - 36597758
Alignment:
Q  101 caacaattatttattaaaaaattatatatttaatagaaaatacacaagtttcaatacaaacatactactttaaacttattaacgtatgcaaatttgcata 200  Q
    |||||||||||||  ||||| |||||||||||||| |||||   |||||| |||| ||||  ||||| |||||| || ||||| | |||||||||||| |    
T  36597646 caacaattatttaacaaaaagttatatatttaatacaaaatgttcaagttccaatgcaaagttactattttaaatttcttaacatgtgcaaatttgcaca 36597745  T
Q  201 tgatagaaaaacc 213  Q
    |||||||||||||    
T  36597746 tgatagaaaaacc 36597758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 101 - 212
Target Start/End: Original strand, 40166349 - 40166459
Alignment:
Q  101 caacaattatttattaaaaaattatatatttaatagaaaatacacaagtttcaatacaaacatactactttaaacttattaacgtatgcaaatttgcata 200  Q
    |||||||||||||| ||||| |||||||||||||| |||||  ||||||||||||||| |  | ||| |||| | |||||||| | |||||||||||| |    
T  40166349 caacaattatttatcaaaaagttatatatttaatacaaaatgtacaagtttcaatacatagttgctaatttagatttattaacat-tgcaaatttgcaca 40166447  T
Q  201 tgatagaaaaac 212  Q
    | ||||||||||    
T  40166448 taatagaaaaac 40166459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 101 - 211
Target Start/End: Complemental strand, 16174732 - 16174623
Alignment:
Q  101 caacaattatttattaaaaaattatatatttaatagaaaatacacaagtttcaatacaaacatactactttaaacttattaacgtatgcaaatttgcata 200  Q
    ||||||||| |||||||||| ||| |||||||||| ||| | ||||||||||||| ||||  |||||||||||| || |||   | |||||||||||| |    
T  16174732 caacaattaattattaaaaacttacatatttaatataaa-tgcacaagtttcaattcaaagttactactttaaatttcttatgatgtgcaaatttgcaaa 16174634  T
Q  201 tgatagaaaaa 211  Q
    |||||||||||    
T  16174633 tgatagaaaaa 16174623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 111 - 212
Target Start/End: Complemental strand, 32020086 - 32019984
Alignment:
Q  111 ttattaaaaaa-ttatatatttaatagaaaatacacaagtttcaatacaaacatactactttaaacttattaacgtatgcaaatttgcatatgatagaaa 209  Q
    ||||||||||| |||| ||||||||| | |||||||||||| ||| |||||| ||| | |||||| || ||||| | |||||||||||| ||||||||||    
T  32020086 ttattaaaaaagttatctatttaatatagaatacacaagttccaagacaaacttaccattttaaatttcttaacatgtgcaaatttgcacatgatagaaa 32019987  T
Q  210 aac 212  Q
    |||    
T  32019986 aac 32019984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 101 - 211
Target Start/End: Original strand, 41350270 - 41350379
Alignment:
Q  101 caacaattatttattaaaaaattatatatttaatagaaaatacacaagtttcaatacaaacatactactttaaacttattaacgtatgcaaatttgcata 200  Q
    |||||||||||||||||||  ||| |||||||||| ||||  |||||||| |||  ||||  ||||||||||||||| ||||| | |||||||||||| |    
T  41350270 caacaattatttattaaaag-ttacatatttaatataaaaagcacaagttccaagtcaaaattactactttaaacttcttaacatgtgcaaatttgcaca 41350368  T
Q  201 tgatagaaaaa 211  Q
    ||||| |||||    
T  41350369 tgataaaaaaa 41350379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 105 - 210
Target Start/End: Complemental strand, 31567598 - 31567493
Alignment:
Q  105 aattatttattaaaaaattatatatttaatagaaaatacacaagtttcaatacaaacatactactttaaacttattaacgtatgcaaatttgcatatgat 204  Q
    ||||||| ||||||||| || |||||||||| |||||  |||| |||||| |||||  ||| | |||||| || ||||| | ||||||||||||||||||    
T  31567598 aattattcattaaaaaactacatatttaatataaaatgaacaaatttcaagacaaaattaccattttaaattttttaacatgtgcaaatttgcatatgat 31567499  T
Q  205 agaaaa 210  Q
    ||||||    
T  31567498 agaaaa 31567493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 126 - 213
Target Start/End: Original strand, 4047504 - 4047591
Alignment:
Q  126 atatttaatagaaaatacacaagtttcaatacaaacatactactttaaacttattaacgtatgcaaatttgcatatgatagaaaaacc 213  Q
    |||||||||| |||| ||||||||| |||   |||  ||||||||||||||| ||||| | |||||||||||| ||||||||||||||    
T  4047504 atatttaatataaaaaacacaagttccaagttaaagttactactttaaacttcttaacatgtgcaaatttgcacatgatagaaaaacc 4047591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 111 - 213
Target Start/End: Complemental strand, 13516027 - 13515925
Alignment:
Q  111 ttattaaaaaattatatatttaatagaaaatacacaagtttcaatacaaacatactactttaaacttattaacgtatgcaaatttgcatatgatagaaaa 210  Q
    ||||||||||||||| ||||||||| | |||| | ||||||||| | |||| | | |||||||| || ||||| | ||||||||| || |||||||||||    
T  13516027 ttattaaaaaattatctatttaatatagaatatataagtttcaagataaactttccactttaaatttgttaacatgtgcaaatttacacatgatagaaaa 13515928  T
Q  211 acc 213  Q
    |||    
T  13515927 acc 13515925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 101 - 183
Target Start/End: Complemental strand, 26265155 - 26265073
Alignment:
Q  101 caacaattatttattaaaaaattatatatttaatagaaaatacacaagtttcaatacaaacatactactttaaacttattaac 183  Q
    ||||||||||||||| |||| || |||||||||||  ||||| |||||||||||||||||  | ||| ||||||||| |||||    
T  26265155 caacaattatttatttaaaagttttatatttaatattaaatatacaagtttcaatacaaaacttctattttaaacttcttaac 26265073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 123 - 212
Target Start/End: Complemental strand, 23995505 - 23995416
Alignment:
Q  123 tatatatttaatagaaaatacacaagtttcaatacaaacatactactttaaacttattaacgtatgcaaatttgcatatgatagaaaaac 212  Q
    ||||||||||||| |||||  ||||||||||||| |||  ||||| ||||||||| ||||| | | |||||||||| || ||||||||||    
T  23995505 tatatatttaatacaaaatgtacaagtttcaatataaaattactattttaaacttcttaacatgtacaaatttgcacataatagaaaaac 23995416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 116 - 212
Target Start/End: Original strand, 35469636 - 35469732
Alignment:
Q  116 aaaaaattatatatttaatagaaaatacacaagtttcaatacaaacatactactttaaacttattaacgtatgcaaatttgcatatgatagaaaaac 212  Q
    ||||| |||||||||||||| |||||| || |||| ||||| || | ||||| |||||| || ||||| | ||||||||| || |||||||||||||    
T  35469636 aaaaagttatatatttaatataaaataaactagttccaataaaagcttactattttaaattttttaacatgtgcaaatttacacatgatagaaaaac 35469732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 101 - 210
Target Start/End: Complemental strand, 3737987 - 3737874
Alignment:
Q  101 caacaattatttattaaaaaattatatatttaataga-aaatacacaagtttcaatacaaacata---ctactttaaacttattaacgtatgcaaatttg 196  Q
    ||||||||||||||| |||| || |||||||||||   ||||| |||| |||||||||||| | |   ||| ||||||||||||||| | |||||||||     
T  3737987 caacaattatttattcaaaagttttatatttaatatttaaatatacaactttcaatacaaaaaaatttctattttaaacttattaacatgtgcaaattta 3737888  T
Q  197 catatgatagaaaa 210  Q
    ||||||| ||||||    
T  3737887 catatgaaagaaaa 3737874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 105 - 212
Target Start/End: Original strand, 15837346 - 15837453
Alignment:
Q  105 aattatttattaaaaaattatatatttaatagaaaatacacaagtttcaatacaaacatactactttaaacttattaacgtatgcaaatttgcatatgat 204  Q
    |||||||||||||||  |  ||||||||||| ||||| ||||||||||||||||||  ||||| ||||   || |||||   || ||||||| |||||||    
T  15837346 aattatttattaaaatgtattatatttaatataaaatgcacaagtttcaatacaaatttactattttagttttcttaacaagtgtaaatttggatatgat 15837445  T
Q  205 agaaaaac 212  Q
    ||||||||    
T  15837446 agaaaaac 15837453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 101 - 211
Target Start/End: Original strand, 28629946 - 28630056
Alignment:
Q  101 caacaattatttattaaaaaattatatatttaatagaaaatacacaagtttcaatacaaacatactactttaaacttattaacgtatgcaaatttgca-t 199  Q
    |||||||||||||||||||  ||| |||||||||| |||| |||||||| ||||   ||| ||| |||||||||||| ||| | | ||||||||||||      
T  28629946 caacaattatttattaaaag-ttacatatttaatataaaaaacacaagtctcaagttaaagatattactttaaacttcttatcatgtgcaaatttgcacg 28630044  T
Q  200 atgatagaaaaa 211  Q
    ||||||||||||    
T  28630045 atgatagaaaaa 28630056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 101 - 212
Target Start/End: Complemental strand, 31366060 - 31365950
Alignment:
Q  101 caacaattatttattaaaaaattatatatttaatagaaaatacacaagtttcaatacaaacatactactttaaacttattaacgtatgcaaatttgcata 200  Q
    ||||||||||| ||||||   ||| |||||||||| |||| ||||||||| |||  ||||  ||||| ||||||||| ||||| | | |||||||||| |    
T  31366060 caacaattattgattaaatg-ttacatatttaatataaaaaacacaagttccaagtcaaagttactaatttaaacttcttaacatgtacaaatttgcaca 31365962  T
Q  201 tgatagaaaaac 212  Q
    ||||||||||||    
T  31365961 tgatagaaaaac 31365950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 101 - 212
Target Start/End: Complemental strand, 39990148 - 39990039
Alignment:
Q  101 caacaattatttattaaaaaattatatatttaatagaaaatacacaagtttcaatacaaacatactactttaaacttattaacgtatgcaaatttgcata 200  Q
    |||||||||| || |||||||   ||||||||||||||||| |||||||||||| |||||| || || ||||||||| ||||| | |||| |||| || |    
T  39990148 caacaattatctaataaaaaaagttatatttaatagaaaatgcacaagtttcaagacaaacttatta-tttaaactt-ttaacatgtgcacatttacaca 39990051  T
Q  201 tgatagaaaaac 212  Q
    ||||| ||||||    
T  39990050 tgataaaaaaac 39990039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 126 - 211
Target Start/End: Complemental strand, 14466580 - 14466495
Alignment:
Q  126 atatttaatagaaaatacacaagtttcaatacaaacatactactttaaacttattaacgtatgcaaatttgcatatgatagaaaaa 211  Q
    |||||||||| |||| |||||||||||||   |||  ||||||||||||||| ||||| | |  ||||||||| ||||||||||||    
T  14466580 atatttaatataaaaaacacaagtttcaagttaaagttactactttaaacttcttaacatgtctaaatttgcacatgatagaaaaa 14466495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 123 - 211
Target Start/End: Original strand, 12332426 - 12332514
Alignment:
Q  123 tatatatttaatagaaaatacacaagtttcaatacaaacatactactttaaacttattaacgtatgcaaatttgcatatgatagaaaaa 211  Q
    ||||||||||||  |||||||||||||| ||||| |||| ||||||||||   |  ||||| | |||||||||||| ||| ||||||||    
T  12332426 tatatatttaatgtaaaatacacaagttccaatataaacttactactttagtatccttaacatgtgcaaatttgcacatgttagaaaaa 12332514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 123 - 211
Target Start/End: Complemental strand, 31613238 - 31613150
Alignment:
Q  123 tatatatttaatagaaaatacacaagtttcaatacaaacatactactttaaacttattaacgtatgcaaatttgcatatgatagaaaaa 211  Q
    ||||||||||||  |||||||||||||| ||||| |||| ||||||||||   |  ||||| | |||||||||||| ||| ||||||||    
T  31613238 tatatatttaatgtaaaatacacaagttccaatataaacttactactttagtatccttaacatgtgcaaatttgcacatgttagaaaaa 31613150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 123 - 211
Target Start/End: Original strand, 31705018 - 31705106
Alignment:
Q  123 tatatatttaatagaaaatacacaagtttcaatacaaacatactactttaaacttattaacgtatgcaaatttgcatatgatagaaaaa 211  Q
    ||||||||||||  |||||||||||||| ||||| |||| ||||||||||   |  ||||| | |||||||||||| ||| ||||||||    
T  31705018 tatatatttaatgtaaaatacacaagttccaatataaacttactactttagtatccttaacatgtgcaaatttgcacatgttagaaaaa 31705106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 123 - 211
Target Start/End: Original strand, 40454150 - 40454238
Alignment:
Q  123 tatatatttaatagaaaatacacaagtttcaatacaaacatactactttaaacttattaacgtatgcaaatttgcatatgatagaaaaa 211  Q
    ||||||||||||  |||||||||||||| ||||| |||| ||||||||||   |  ||||| | |||||||||||| ||| ||||||||    
T  40454150 tatatatttaatgtaaaatacacaagttccaatataaacttactactttagtatccttaacatgtgcaaatttgcacatgttagaaaaa 40454238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 101 - 209
Target Start/End: Original strand, 40513018 - 40513126
Alignment:
Q  101 caacaattatttattaaaaaattatatatttaatagaaaatacacaagtttcaatacaaacatactactttaaacttattaacgtatgcaaatttgcata 200  Q
    |||||||||||||  ||||| |||||||||| ||| ||||||  ||| || |||| ||||  ||||| |||||| || ||||| | |||||||||| | |    
T  40513018 caacaattatttaacaaaaagttatatatttgatacaaaatattcaaattccaatgcaaagttactattttaaattttttaacatgtgcaaatttgtaca 40513117  T
Q  201 tgatagaaa 209  Q
    |||||||||    
T  40513118 tgatagaaa 40513126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 104 - 183
Target Start/End: Original strand, 18150484 - 18150563
Alignment:
Q  104 caattatttattaaaaaattatatatttaatagaaaatacacaagtttcaatacaaacatactactttaaacttattaac 183  Q
    ||||||||||||||||  |||||||||||||| |||||| |||||||  ||  ||||  ||||| ||||||||| |||||    
T  18150484 caattatttattaaaatgttatatatttaatacaaaatatacaagttctaacgcaaaattactattttaaacttcttaac 18150563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 102 - 161
Target Start/End: Complemental strand, 38994184 - 38994126
Alignment:
Q  102 aacaattatttattaaaaaattatatatttaatagaaaatacacaagtttcaatacaaac 161  Q
    ||||||||||||||||||  ||||||||||| || |||||| |||| |||||||||||||    
T  38994184 aacaattatttattaaaag-ttatatatttactataaaatatacaaatttcaatacaaac 38994126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 101 - 174
Target Start/End: Original strand, 7162910 - 7162981
Alignment:
Q  101 caacaattatttattaaaaaattatatatttaatagaaaatacacaagtttcaatacaaacatactactttaaa 174  Q
    |||||||||||||||||| |  ||| ||||||||| |||||  |||||||||||| ||||| ||||| ||||||    
T  7162910 caacaattatttattaaata--tatgtatttaatataaaatgaacaagtttcaattcaaacttactattttaaa 7162981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 126 - 212
Target Start/End: Complemental strand, 12642079 - 12641993
Alignment:
Q  126 atatttaatagaaaatacacaagtttcaatacaaacatactactttaaacttattaacgtatgcaaatttgcatatgatagaaaaac 212  Q
    |||||||||| |||| ||||||||| |||  ||||  || || ||||||||| ||||| | |||||||||||| || ||||||||||    
T  12642079 atatttaatataaaaaacacaagttccaaatcaaagttattaatttaaacttcttaacatgtgcaaatttgcacattatagaaaaac 12641993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 123 - 173
Target Start/End: Original strand, 13761759 - 13761809
Alignment:
Q  123 tatatatttaatagaaaatacacaagtttcaatacaaacatactactttaa 173  Q
    ||||||||||||  |||||||||||||| ||||| |||| |||||||||||    
T  13761759 tatatatttaatgtaaaatacacaagttccaatataaacttactactttaa 13761809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 102 - 195
Target Start/End: Original strand, 15190941 - 15191034
Alignment:
Q  102 aacaattatttattaaaaaattatatatttaatagaaaata-cacaagtttcaatacaaacatactactttaaacttattaacgtatgcaaattt 195  Q
    |||||||||| |||||||  ||| |||||||||| |||| | ||||||||||||  ||||  ||||||||||||||| ||||| | |||||||||    
T  15190941 aacaattattgattaaaag-ttacatatttaatataaaaaaacacaagtttcaagtcaaaattactactttaaacttcttaacatgtgcaaattt 15191034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 106 - 204
Target Start/End: Complemental strand, 36474734 - 36474637
Alignment:
Q  106 attatttattaaaaaattatatatttaatagaaaatacacaagtttcaatacaaacatactactttaaacttattaacgtatgcaaatttgcatatgat 204  Q
    |||||||||| ||||| | |||||||||||  ||||| |||||||||||||||||  | ||| ||||||||| ||||  | ||||| |||||| |||||    
T  36474734 attatttattcaaaaaat-tatatttaatattaaatatacaagtttcaatacaaaatttctattttaaactttttaatatgtgcaattttgcacatgat 36474637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 105 - 174
Target Start/End: Complemental strand, 10665072 - 10665003
Alignment:
Q  105 aattatttattaaaaaattatatatttaatagaaaatacacaagtttcaatacaaacatactactttaaa 174  Q
    |||||||||||||||| ||||| ||||||||   |||||||||||| ||| |||||| ||| | ||||||    
T  10665072 aattatttattaaaaagttataaatttaatatgcaatacacaagttccaagacaaacttaccattttaaa 10665003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 101 - 173
Target Start/End: Complemental strand, 11250068 - 11249996
Alignment:
Q  101 caacaattatttattaaaaaattatatatttaatagaaaatacacaagtttcaatacaaacatactactttaa 173  Q
    ||||||||||||| ||| ||||||||| ||||||| |||||  ||| |||||||| ||||  ||||| |||||    
T  11250068 caacaattatttagtaataaattatatgtttaatacaaaatgtacatgtttcaatgcaaagttactattttaa 11249996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 56; Significance: 2e-23; HSPs: 54)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 101 - 212
Target Start/End: Complemental strand, 46492454 - 46492343
Alignment:
Q  101 caacaattatttattaaaaaattatatatttaatagaaaatacacaagtttcaatacaaacatactactttaaacttattaacgtatgcaaatttgcata 200  Q
    |||||||||||||||||  | |||||||||||||| |||||  |||||||||||| ||||  |||||||||||| || ||||||| || ||||||||| |    
T  46492454 caacaattatttattaacgagttatatatttaatacaaaatgtacaagtttcaatgcaaagttactactttaaatttcttaacgtgtgaaaatttgcaca 46492355  T
Q  201 tgatagaaaaac 212  Q
    ||||||||||||    
T  46492354 tgatagaaaaac 46492343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 105 - 211
Target Start/End: Original strand, 7940863 - 7940969
Alignment:
Q  105 aattatttattaaaaaattatatatttaatagaaaatacacaagtttcaatacaaacatactactttaaacttattaacgtatgcaaatttgcatatgat 204  Q
    |||||||||||||||| |||||||||||||| |||||||| ||||| ||| |||||  ||| | |||||| || |||||| ||| |||||||||||||||    
T  7940863 aattatttattaaaaagttatatatttaatataaaatacagaagttacaagacaaatttaccattttaaatttcttaacgcatgtaaatttgcatatgat 7940962  T
Q  205 agaaaaa 211  Q
    |||||||    
T  7940963 agaaaaa 7940969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 101 - 209
Target Start/End: Complemental strand, 23803157 - 23803049
Alignment:
Q  101 caacaattatttattaaaaaattatatatttaatagaaaatacacaagtttcaatacaaacatactactttaaacttattaacgtatgcaaatttgcata 200  Q
    ||||||||||||||| |||| || |||||||||||  ||||| ||||||| |||| ||||  | ||| ||||||||| ||||| | ||||||||||||||    
T  23803157 caacaattatttattcaaaagttttatatttaatatgaaatatacaagttccaatgcaaaatttctattttaaacttcttaacatgtgcaaatttgcata 23803058  T
Q  201 tgatagaaa 209  Q
    |||||||||    
T  23803057 tgatagaaa 23803049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 101 - 212
Target Start/End: Original strand, 13495361 - 13495472
Alignment:
Q  101 caacaattatttattaaaaaattatatatttaatagaaaatacacaagtttcaatacaaacatactactttaaacttattaacgtatgcaaatttgcata 200  Q
    ||||||||||||||||||||  || |||||||||| ||||| |||||||| |||  ||||  ||||||||||||||| ||| | | ||||||||| || |    
T  13495361 caacaattatttattaaaaacctacatatttaatataaaatgcacaagttccaagtcaaaattactactttaaacttcttatcatgtgcaaattttcaca 13495460  T
Q  201 tgatagaaaaac 212  Q
    ||||||||||||    
T  13495461 tgatagaaaaac 13495472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 101 - 213
Target Start/End: Original strand, 2571335 - 2571447
Alignment:
Q  101 caacaattatttattaaaaaattatatatttaatagaaaatacacaagtttcaatacaaacatactactttaaacttattaacgtatgcaaatttgcata 200  Q
    |||||||||||||  ||||| |||||||||||||| |||||   |||||| |||| ||||  ||||| |||||| || ||||| | |||||||||||| |    
T  2571335 caacaattatttaacaaaaagttatatatttaatacaaaatgttcaagttccaatgcaaagttactattttaaatttcttaacatgtgcaaatttgcaca 2571434  T
Q  201 tgatagaaaaacc 213  Q
    |||||||||||||    
T  2571435 tgatagaaaaacc 2571447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 101 - 213
Target Start/End: Original strand, 10307833 - 10307945
Alignment:
Q  101 caacaattatttattaaaaaattatatatttaatagaaaatacacaagtttcaatacaaacatactactttaaacttattaacgtatgcaaatttgcata 200  Q
    |||||||||||||  ||||| |||||||||||||| |||||   |||||| |||| ||||  ||||| |||||| || ||||| | |||||||||||| |    
T  10307833 caacaattatttaacaaaaagttatatatttaatacaaaatgttcaagttccaatgcaaatttactattttaaatttcttaacatgtgcaaatttgcaca 10307932  T
Q  201 tgatagaaaaacc 213  Q
    |||||||||||||    
T  10307933 tgatagaaaaacc 10307945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 102 - 154
Target Start/End: Complemental strand, 26486487 - 26486435
Alignment:
Q  102 aacaattatttattaaaaaattatatatttaatagaaaatacacaagtttcaa 154  Q
    |||||||||||||||||||| ||||||||||||| ||||||||||||||||||    
T  26486487 aacaattatttattaaaaaactatatatttaatataaaatacacaagtttcaa 26486435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 101 - 211
Target Start/End: Complemental strand, 51567928 - 51567821
Alignment:
Q  101 caacaattatttattaaaaaattatatatttaatagaaaatacacaagtttcaatacaaacatactactttaaacttattaacgtatgcaaatttgcata 200  Q
    ||||||||||||||| |||| || |||||||||||| ||||  |||||||||||||||||  | ||| |||||||   ||||| | |||||||||||| |    
T  51567928 caacaattatttattcaaaagttttatatttaatagtaaatgtacaagtttcaatacaaaatttctattttaaac---ttaacatgtgcaaatttgcaca 51567832  T
Q  201 tgatagaaaaa 211  Q
    |||||||||||    
T  51567831 tgatagaaaaa 51567821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 101 - 208
Target Start/End: Original strand, 11610982 - 11611088
Alignment:
Q  101 caacaattatttattaaaaaattatatatttaatagaaaatacacaagtttcaatacaaacatactactttaaacttattaacgtatgcaaatttgcata 200  Q
    |||||||||||||||||||  ||| |||||||||| |||| ||||||||| |||  ||||  ||||||||||||||| ||| | | |||||||||||| |    
T  11610982 caacaattatttattaaaag-ttacatatttaatataaaaaacacaagttccaagtcaaagttactactttaaacttcttatcatgtgcaaatttgcaca 11611080  T
Q  201 tgatagaa 208  Q
    ||||||||    
T  11611081 tgatagaa 11611088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 104 - 211
Target Start/End: Complemental strand, 23638157 - 23638050
Alignment:
Q  104 caattatttattaaaaaattatatatttaatagaaaatacacaagtttcaatacaaacatactactttaaacttattaacgtatgcaaatttgcatatga 203  Q
    |||||||||| |||||| || ||||||||||| |||||||||||||||||| || ||| ||| | |||||| || ||||| | |||||||||||  ||||    
T  23638157 caattatttaataaaaagttgtatatttaatataaaatacacaagtttcaagactaacttaccattttaaatttcttaacatgtgcaaatttgctcatga 23638058  T
Q  204 tagaaaaa 211  Q
    || |||||    
T  23638057 tataaaaa 23638050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 105 - 171
Target Start/End: Complemental strand, 14847107 - 14847041
Alignment:
Q  105 aattatttattaaaaaattatatatttaatagaaaatacacaagtttcaatacaaacatactacttt 171  Q
    ||||||||||| |||| ||||||||| |||| |||||||||||||| |||||||||| |||||||||    
T  14847107 aattatttatttaaaatttatatattcaatataaaatacacaagttacaatacaaacttactacttt 14847041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 107 - 213
Target Start/End: Original strand, 38389520 - 38389626
Alignment:
Q  107 ttatttattaaaaaattatatatttaatagaaaatacacaagtttcaatacaaacatactactttaaacttattaacgtatgcaaatttgcatatgatag 206  Q
    ||||||||||||||  || ||||||||||  |||| |||||||| |||  ||||  ||| ||||||||||| ||||| | |||||||||||| |||||||    
T  38389520 ttatttattaaaaagctacatatttaatatgaaatgcacaagttccaagtcaaaattaccactttaaacttcttaacatgtgcaaatttgcacatgatag 38389619  T
Q  207 aaaaacc 213  Q
    |||||||    
T  38389620 aaaaacc 38389626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 101 - 213
Target Start/End: Original strand, 51618117 - 51618226
Alignment:
Q  101 caacaattatttattaaaaaattatatatttaatagaaaatacacaagtttcaatacaaacatactactttaaacttattaacgtatgcaaatttgcata 200  Q
    |||||||||||||||||||   ||||||||||||| |||||  ||||||| |||| ||||  ||| | || |||||| ||||| | |||||||||||| |    
T  51618117 caacaattatttattaaaa---tatatatttaatacaaaatgtacaagttccaatgcaaagttacaatttgaaacttcttaacatgtgcaaatttgcaca 51618213  T
Q  201 tgatagaaaaacc 213  Q
    |||||||||||||    
T  51618214 tgatagaaaaacc 51618226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 103 - 212
Target Start/End: Complemental strand, 13879916 - 13879808
Alignment:
Q  103 acaattatttattaaaaaattatatatttaatagaaaatacacaagtttcaatacaaacatactactttaaacttattaacgtatgcaaatttgcatatg 202  Q
    ||||||||||||||||||  || ||||||||||  ||||  ||| |||||||||||| | ||||  ||||| ||| ||||| |||||||| |||||||||    
T  13879916 acaattatttattaaaaatatacatatttaatattaaatgaacaggtttcaatacaaccttacttttttaa-cttcttaacatatgcaaacttgcatatg 13879818  T
Q  203 atagaaaaac 212  Q
    ||||||||||    
T  13879817 atagaaaaac 13879808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 102 - 211
Target Start/End: Complemental strand, 37055476 - 37055367
Alignment:
Q  102 aacaattatttattaaaaaattatatatttaatagaaaatacacaagtttcaatacaaacatactactttaaacttattaacgtatgcaaatttgcatat 201  Q
    ||||||||||||||||||| || |||| |||||| |||| ||||||||| | ||||||   ||||| ||||||||| ||||  | ||||||||| || ||    
T  37055476 aacaattatttattaaaaagttttatagttaatataaaaaacacaagttccgatacaactttactattttaaacttcttaatatgtgcaaattttcacat 37055377  T
Q  202 gatagaaaaa 211  Q
    ||||||||||    
T  37055376 gatagaaaaa 37055367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 126 - 213
Target Start/End: Original strand, 3863421 - 3863508
Alignment:
Q  126 atatttaatagaaaatacacaagtttcaatacaaacatactactttaaacttattaacgtatgcaaatttgcatatgatagaaaaacc 213  Q
    |||||||||| |||| ||||||||| |||   |||  ||||||||||||||| ||||| | |||||||||||| ||||||||||||||    
T  3863421 atatttaatataaaaaacacaagttccaagctaaagttactactttaaacttcttaacatgtgcaaatttgcacatgatagaaaaacc 3863508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 126 - 213
Target Start/End: Complemental strand, 16875111 - 16875024
Alignment:
Q  126 atatttaatagaaaatacacaagtttcaatacaaacatactactttaaacttattaacgtatgcaaatttgcatatgatagaaaaacc 213  Q
    |||||||||| |||| |||||||||||||   |||  ||||||||||||||| ||||| | |||||||||||| | ||||||||||||    
T  16875111 atatttaatataaaaaacacaagtttcaagttaaagttactactttaaacttcttaacatgtgcaaatttgcacacgatagaaaaacc 16875024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 102 - 212
Target Start/End: Original strand, 20938125 - 20938235
Alignment:
Q  102 aacaattatttattaaaaaattatatatttaatagaaaata-cacaagtttcaatacaaacatactactttaaacttattaacgtatgcaaatttgcata 200  Q
    |||||||||| |||||||| ||| |||||||||| |||| | |||||||| |||  ||||  ||||||||||||||| ||| | | |||||||||||| |    
T  20938125 aacaattattgattaaaaa-ttacatatttaatataaaaaaacacaagttccaagtcaaagttactactttaaacttcttatcatgtgcaaatttgcaca 20938223  T
Q  201 tgatagaaaaac 212  Q
    ||||||||||||    
T  20938224 tgatagaaaaac 20938235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 101 - 212
Target Start/End: Complemental strand, 33474584 - 33474473
Alignment:
Q  101 caacaattatttattaaaaaattatatatttaatagaaaatacacaagtttcaatacaaacatactactttaaacttattaacgtatgcaaatttgcata 200  Q
    ||||||||||||||| |||||||||||||||| || |||||  | || ||||||| ||||  | | | | ||||||| ||||| | |||||||||||| |    
T  33474584 caacaattatttatttaaaaattatatatttattacaaaatgtataaatttcaatgcaaaatttcaattataaacttcttaacatgtgcaaatttgcaca 33474485  T
Q  201 tgatagaaaaac 212  Q
    ||||||||||||    
T  33474484 tgatagaaaaac 33474473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 101 - 212
Target Start/End: Complemental strand, 35414920 - 35414809
Alignment:
Q  101 caacaattatttattaaaaaattatatatttaatagaaaatacacaagtttcaatacaaacatactactttaaacttattaacgtatgcaaatttgcata 200  Q
    |||||||||||| || |||| ||||||||| |||| |||||| |||| || ||||| |||  ||||| ||| ||||| ||||| | || ||||||||| |    
T  35414920 caacaattatttgttcaaaagttatatattaaatacaaaatatacaacttccaatataaagttactattttgaacttcttaacatgtgtaaatttgcaca 35414821  T
Q  201 tgatagaaaaac 212  Q
    ||||||||||||    
T  35414820 tgatagaaaaac 35414809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 101 - 212
Target Start/End: Original strand, 38785947 - 38786058
Alignment:
Q  101 caacaattatttattaaaaaattatatatttaatagaaaatacacaagtttcaatacaaacatactactttaaacttattaacgtatgcaaatttgcata 200  Q
    |||||||||||||||  ||| || ||||||||||| ||||   ||||||| |||||||||  | ||| ||||||||| |||||  |||||| |||| |||    
T  38785947 caacaattatttatttgaaagttttatatttaatataaaacgtacaagttccaatacaaaatttctattttaaacttcttaactcatgcaagtttggata 38786046  T
Q  201 tgatagaaaaac 212  Q
    ||||||||||||    
T  38786047 tgatagaaaaac 38786058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 102 - 213
Target Start/End: Original strand, 45983574 - 45983685
Alignment:
Q  102 aacaattatttattaaaaaattatatatttaatagaaaatacacaagtttcaatacaaacatactactttaaacttattaacgtatgcaaatttgcatat 201  Q
    ||||||||||| || |||| | ||||||||||||  ||||  ||||||||||||| |||  | ||| ||||||||| ||||| | |||||||||||| ||    
T  45983574 aacaattatttgttcaaaagtaatatatttaatattaaatgtacaagtttcaatataaaatttctattttaaacttcttaacctgtgcaaatttgcacat 45983673  T
Q  202 gatagaaaaacc 213  Q
    |||| |||||||    
T  45983674 gataaaaaaacc 45983685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 102 - 213
Target Start/End: Original strand, 50204471 - 50204582
Alignment:
Q  102 aacaattatttattaaaaaattatatatttaatagaaaatacacaagtttcaatacaaacatactactttaaacttattaacgtatgcaaatttgcatat 201  Q
    ||||||||| |||| |||| || |||||||||||  ||||  ||| ||| |||||||||  | ||| ||||||||| ||||| | |||||||||||| ||    
T  50204471 aacaattatatattcaaaagttttatatttaatattaaatgtacaggttccaatacaaaatttctattttaaacttcttaacatgtgcaaatttgcacat 50204570  T
Q  202 gatagaaaaacc 213  Q
    ||||||||||||    
T  50204571 gatagaaaaacc 50204582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 103 - 173
Target Start/End: Complemental strand, 54320789 - 54320720
Alignment:
Q  103 acaattatttattaaaaaattatatatttaatagaaaatacacaagtttcaatacaaacatactactttaa 173  Q
    |||||||||| ||||||||||||||||| |||| |||| |||||| |||||||| | ||||||||||||||    
T  54320789 acaattattttttaaaaaattatatatt-aatataaaacacacaaatttcaatatatacatactactttaa 54320720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 101 - 213
Target Start/End: Complemental strand, 12515585 - 12515473
Alignment:
Q  101 caacaattatttattaaaaaattatatatttaatagaaaatacacaagtttcaatacaaacatactactttaaacttattaacgtatgcaaatttgcata 200  Q
    |||||||||||||  ||||| |||||||||||||| |||||   |||||| | || ||||  ||||| |||||| || ||||| | ||||||||| || |    
T  12515585 caacaattatttaacaaaaagttatatatttaatacaaaatgttcaagttcctatgcaaagttactattttaaattttttaacatgtgcaaatttacaca 12515486  T
Q  201 tgatagaaaaacc 213  Q
    |||||||||||||    
T  12515485 tgatagaaaaacc 12515473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 104 - 160
Target Start/End: Original strand, 23320140 - 23320196
Alignment:
Q  104 caattatttattaaaaaattatatatttaatagaaaatacacaagtttcaatacaaa 160  Q
    |||||||||||||||||  ||||||||||||| ||||||||| |||||||| |||||    
T  23320140 caattatttattaaaaagatatatatttaatataaaatacacgagtttcaagacaaa 23320196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 101 - 213
Target Start/End: Original strand, 29686388 - 29686499
Alignment:
Q  101 caacaattatttattaaaaaattatatatttaatagaaaatacacaagtttcaatacaaacatactactttaaacttattaacgtatgcaaatttgcata 200  Q
    |||||||||||||||||||  | |||||| ||||| |||| |||||||||  ||   |||  ||||||||||||||| ||| | | |||||||||||| |    
T  29686388 caacaattatttattaaaagct-atatatgtaatataaaaaacacaagttctaagttaaagttactactttaaacttcttatcatgtgcaaatttgcaca 29686486  T
Q  201 tgatagaaaaacc 213  Q
    |||||||||||||    
T  29686487 tgatagaaaaacc 29686499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 126 - 213
Target Start/End: Original strand, 23523038 - 23523125
Alignment:
Q  126 atatttaatagaaaatacacaagtttcaatacaaacatactactttaaacttattaacgtatgcaaatttgcatatgatagaaaaacc 213  Q
    ||||||||||  |||| |||||||| |||  ||||  ||| ||||||||||| ||||| | |||||||||||| ||||||||||||||    
T  23523038 atatttaatatgaaatgcacaagttccaagtcaaaattaccactttaaacttcttaacatgtgcaaatttgcacatgatagaaaaacc 23523125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 113 - 210
Target Start/End: Original strand, 9247817 - 9247912
Alignment:
Q  113 attaaaaaattatatatttaatagaaaatacacaagtttcaatacaaacatactactttaaacttattaacgtatgcaaatttgcatatgatagaaaa 210  Q
    ||||||||||||||||||||||| |||||  |||| |||||| ||  |  ||||| ||||| | | ||||| |||||||||||||| |||||||||||    
T  9247817 attaaaaaattatatatttaatataaaatttacaaatttcaaaac--agctactattttaatcattttaacatatgcaaatttgcacatgatagaaaa 9247912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 107 - 213
Target Start/End: Complemental strand, 36426514 - 36426408
Alignment:
Q  107 ttatttattaaaaaattatatatttaatagaaaatacacaagtttcaatacaaacatactactttaaacttattaacgtatgcaaatttgcatatgatag 206  Q
    ||||||||||||||  || ||||||||||  |||| |||||||| |||  ||||  ||| ||||||||||| ||||| | || |||||| || |||||||    
T  36426514 ttatttattaaaaagctacatatttaatatgaaatgcacaagttccaagtcaaaattaccactttaaacttcttaacatgtgtaaatttacacatgatag 36426415  T
Q  207 aaaaacc 213  Q
    |||||||    
T  36426414 aaaaacc 36426408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 117 - 211
Target Start/End: Original strand, 37332196 - 37332290
Alignment:
Q  117 aaaaattatatatttaatagaaaatacacaagtttcaatacaaacatactactttaaacttattaacgtatgcaaatttgcatatgatagaaaaa 211  Q
    ||||||||||||||||||| ||||||||||| ||| || |||||| ||| | |||||| |||| ||| | || ||||||||| || ||| |||||    
T  37332196 aaaaattatatatttaatataaaatacacaaatttaaagacaaacttaccattttaaatttatcaacatgtgtaaatttgcacataataaaaaaa 37332290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 101 - 211
Target Start/End: Original strand, 40497114 - 40497224
Alignment:
Q  101 caacaattatttattaaaaaattatatatttaatagaaaatacacaagtttcaatacaaacatactactttaaacttattaacgtatgcaaatttgcata 200  Q
    ||||||||| ||||||||||  || ||| |||||| ||||| ||||||||  ||   |||  ||||||||||||||| ||| | | |||||||||||| |    
T  40497114 caacaattaattattaaaaatctacatagttaatataaaatgcacaagttctaagttaaagttactactttaaacttcttatcatgtgcaaatttgcaca 40497213  T
Q  201 tgatagaaaaa 211  Q
    |||||||||||    
T  40497214 tgatagaaaaa 40497224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 105 - 211
Target Start/End: Original strand, 42180123 - 42180229
Alignment:
Q  105 aattatttattaaaaaattatatatttaatagaaaatacacaagtttcaatacaaacatactactttaaacttattaacgtatgcaaatttgcatatgat 204  Q
    ||||||||||| |||| || |||||||||||  ||||  ||||||| |||||||||  |  || ||||||||| ||||| | ||||||||| || |||||    
T  42180123 aattatttatttaaaagttttatatttaatattaaatgtacaagttccaatacaaaatttttattttaaacttcttaacatgtgcaaatttacacatgat 42180222  T
Q  205 agaaaaa 211  Q
    |||||||    
T  42180223 agaaaaa 42180229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 105 - 211
Target Start/End: Complemental strand, 48517585 - 48517479
Alignment:
Q  105 aattatttattaaaaaattatatatttaatagaaaatacacaagtttcaatacaaacatactactttaaacttattaacgtatgcaaatttgcatatgat 204  Q
    |||||||||||| |||||||||||||||||| |||||  | |||||| || | |||  ||||||||| ||||| ||||  ||| ||| |||||| |||||    
T  48517585 aattatttattataaaattatatatttaatataaaatgtataagtttgaagataaatttactacttttaactttttaatttattcaagtttgcacatgat 48517486  T
Q  205 agaaaaa 211  Q
    | |||||    
T  48517485 acaaaaa 48517479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 101 - 211
Target Start/End: Complemental strand, 54527817 - 54527707
Alignment:
Q  101 caacaattatttattaaaaaattatatatttaatagaaaatacacaagtttcaatacaaacatactactttaaacttattaacgtatgcaaatttgcata 200  Q
    ||||||||||||||| |||| || |||||||||||  ||||  ||||||| |||||||||  |  || |||||| || ||||| | |||||||||||| |    
T  54527817 caacaattatttattcaaaagttttatatttaatattaaatgtacaagttccaatacaaaatttatattttaaatttcttaacatgtgcaaatttgcaca 54527718  T
Q  201 tgatagaaaaa 211  Q
    | |||||||||    
T  54527717 taatagaaaaa 54527707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 103 - 211
Target Start/End: Complemental strand, 8497529 - 8497421
Alignment:
Q  103 acaattatttattaaaaaattatatatttaatagaaaatacacaagtttcaatacaaacatactactttaaacttattaacgtatgcaaatttgcatatg 202  Q
    ||||||| |||||||||| |||| |||| |||| |||| | |||||||||||| ||||  ||| | |||||| || ||||| |   ||||||| ||||||    
T  8497529 acaattaattattaaaaacttatttattaaatataaaacatacaagtttcaatgcaaaattacaattttaaagtttttaacatggccaaatttacatatg 8497430  T
Q  203 atagaaaaa 211  Q
    |||||||||    
T  8497429 atagaaaaa 8497421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 101 - 209
Target Start/End: Original strand, 9711011 - 9711119
Alignment:
Q  101 caacaattatttattaaaaaattatatatttaatagaaaatacacaagtttcaatacaaacatactactttaaacttattaacgtatgcaaatttgcata 200  Q
    ||||||||||| |||||||| |||| |||| | || |||||| ||||||| |||| | ||  || || ||| ||||| ||||| |||||||||||||| |    
T  9711011 caacaattattaattaaaaatttatgtattaattacaaaatatacaagttccaatgcgaatgtattattttgaacttcttaacatatgcaaatttgcaca 9711110  T
Q  201 tgatagaaa 209  Q
    || ||||||    
T  9711111 tgttagaaa 9711119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 102 - 158
Target Start/End: Original strand, 24657608 - 24657664
Alignment:
Q  102 aacaattatttattaaaaaattatatatttaatagaaaatacacaagtttcaataca 158  Q
    ||||||||||||||||||  |||||||||||||| |||||  |||| ||||||||||    
T  24657608 aacaattatttattaaaattttatatatttaatataaaatgtacaaatttcaataca 24657664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 123 - 211
Target Start/End: Complemental strand, 29932441 - 29932353
Alignment:
Q  123 tatatatttaatagaaaatacacaagtttcaatacaaacatactactttaaacttattaacgtatgcaaatttgcatatgatagaaaaa 211  Q
    ||||||||||||  |||||||||||||| ||||| |||| ||||||||||   |  ||||| | |||||||||||| ||| ||||||||    
T  29932441 tatatatttaatgtaaaatacacaagttccaatataaacttactactttagtatccttaacatgtgcaaatttgcacatgttagaaaaa 29932353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 123 - 211
Target Start/End: Complemental strand, 29981595 - 29981507
Alignment:
Q  123 tatatatttaatagaaaatacacaagtttcaatacaaacatactactttaaacttattaacgtatgcaaatttgcatatgatagaaaaa 211  Q
    ||||||||||||  |||||||||||||| ||||| |||| ||||||||||   |  ||||| | |||||||||||| ||| ||||||||    
T  29981595 tatatatttaatgtaaaatacacaagttccaatataaacttactactttagtatccttaacatgtgcaaatttgcacatgttagaaaaa 29981507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 101 - 213
Target Start/End: Original strand, 51401507 - 51401619
Alignment:
Q  101 caacaattatttattaaaaaattatatatttaatagaaaatacacaagtttcaatacaaacatactactttaaacttattaacgtatgcaaatttgcata 200  Q
    |||||||||||||||  ||  || |||||||||||  ||||  ||||||| |||||||||  | ||| ||||||||| ||||| | |||||||||| | |    
T  51401507 caacaattatttatttgaattttttatatttaatattaaatgtacaagttccaatacaaaatttctattttaaacttcttaacatgtgcaaatttgtaca 51401606  T
Q  201 tgatagaaaaacc 213  Q
    | |||||||||||    
T  51401607 taatagaaaaacc 51401619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 101 - 167
Target Start/End: Complemental strand, 30473002 - 30472935
Alignment:
Q  101 caacaattatttattaaaaaat-tatatatttaatagaaaatacacaagtttcaatacaaacatacta 167  Q
    ||||||| |||||||||||||  |||| |||||||| ||||||||||||||  ||||||||| |||||    
T  30473002 caacaatcatttattaaaaaagatatacatttaatataaaatacacaagttataatacaaacttacta 30472935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 117 - 160
Target Start/End: Complemental strand, 32321819 - 32321776
Alignment:
Q  117 aaaaattatatatttaatagaaaatacacaagtttcaatacaaa 160  Q
    |||||||||||||||||||  ||||||||| |||||||||||||    
T  32321819 aaaaattatatatttaatatgaaatacacatgtttcaatacaaa 32321776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 127 - 210
Target Start/End: Complemental strand, 39364955 - 39364872
Alignment:
Q  127 tatttaatagaaaatacacaagtttcaatacaaacatactactttaaacttattaacgtatgcaaatttgcatatgatagaaaa 210  Q
    ||||||||| ||||| |||||||| ||| |||||  ||||| || |||||| ||||| | |||||||||||| ||||| |||||    
T  39364955 tatttaatataaaatgcacaagttacaagacaaagttactatttaaaacttgttaacatgtgcaaatttgcaaatgattgaaaa 39364872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 122 - 213
Target Start/End: Original strand, 49396468 - 49396559
Alignment:
Q  122 ttatatatttaatagaaaatacacaagtttcaatacaaacatactactttaaacttattaacgtatgcaaatttgcatatgatagaaaaacc 213  Q
    |||||||||||||| ||||| || || ||| ||| ||||  ||||||||||||||| ||||  | | |||||||||| ||| ||||||||||    
T  49396468 ttatatatttaatataaaatgcataaattttaattcaaatttactactttaaacttcttaatatgtacaaatttgcacatggtagaaaaacc 49396559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 102 - 160
Target Start/End: Complemental strand, 2379182 - 2379124
Alignment:
Q  102 aacaattatttattaaaaaattatatatttaatagaaaatacacaagtttcaatacaaa 160  Q
    ||||||||||||||||||| | ||||||| |||| |||||| |||||||| ||| ||||    
T  2379182 aacaattatttattaaaaagtcatatattaaatacaaaatatacaagttttaatgcaaa 2379124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 127 - 213
Target Start/End: Original strand, 2566575 - 2566661
Alignment:
Q  127 tatttaatagaaaatacacaagtttcaatacaaacatactactttaaacttattaacgtatgcaaatttgcatatgatagaaaaacc 213  Q
    |||| |||| |||||  |||||||||||||||||  ||||| |||||| ||  |||| | || ||||||||| ||||||||||||||    
T  2566575 tattcaatacaaaatgtacaagtttcaatacaaaattactattttaaattttctaacatgtgtaaatttgcacatgatagaaaaacc 2566661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 163 - 213
Target Start/End: Original strand, 11611105 - 11611155
Alignment:
Q  163 tactactttaaacttattaacgtatgcaaatttgcatatgatagaaaaacc 213  Q
    ||||||||||||||| ||| | | |||||||||||| ||||||||||||||    
T  11611105 tactactttaaacttcttatcatgtgcaaatttgcacatgatagaaaaacc 11611155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 117 - 159
Target Start/End: Original strand, 19346181 - 19346223
Alignment:
Q  117 aaaaattatatatttaatagaaaatacacaagtttcaatacaa 159  Q
    |||| |||||||||||||| |||||||||||||||| ||||||    
T  19346181 aaaatttatatatttaatataaaatacacaagtttctatacaa 19346223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 111 - 192
Target Start/End: Complemental strand, 54027034 - 54026952
Alignment:
Q  111 ttattaaaaa-attatatatttaatagaaaatacacaagtttcaatacaaacatactactttaaacttattaacgtatgcaaa 192  Q
    |||||||||| | ||||||||||||  |||||||||||||||||||| |||  ||||| |||||| || ||||| | ||||||    
T  54027034 ttattaaaaagaatatatatttaatgtaaaatacacaagtttcaatataaatttactattttaaatttcttaacatttgcaaa 54026952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 138 - 211
Target Start/End: Complemental strand, 46845217 - 46845144
Alignment:
Q  138 aaatacacaagtttcaatacaaacatactactttaaacttattaacgtatgcaaatttgcatatgatagaaaaa 211  Q
    |||| ||||||||||||| |||||||||   ||| ||||| ||||| | | |||||||||| ||||||||||||    
T  46845217 aaatgcacaagtttcaatgcaaacatacccttttgaacttcttaacatgtacaaatttgcacatgatagaaaaa 46845144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 121 - 213
Target Start/End: Original strand, 32553453 - 32553545
Alignment:
Q  121 attatatatttaatagaaaatacacaagtttcaatacaaacatactactttaaacttattaacgtatgcaaatttgcatatgatagaaaaacc 213  Q
    |||| |||||||||| |||| |||||||||||||   |||  || || ||||||||| ||||| | || |||||| || ||||||||||||||    
T  32553453 attacatatttaatataaaaaacacaagtttcaaattaaagttattaatttaaacttcttaacatgtgtaaatttacacatgatagaaaaacc 32553545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 105 - 141
Target Start/End: Complemental strand, 46492315 - 46492279
Alignment:
Q  105 aattatttattaaaaaattatatatttaatagaaaat 141  Q
    |||||||||||||||| |||||||||||||| |||||    
T  46492315 aattatttattaaaaagttatatatttaatacaaaat 46492279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 101 - 177
Target Start/End: Original strand, 50364258 - 50364333
Alignment:
Q  101 caacaattatttattaaaaaattatatatttaatagaaaatacacaagtttcaatacaaacatactactttaaactt 177  Q
    ||||||||||| |||||||  ||| |||||||||| |||| ||||||||| |||  ||||  |||||||||||||||    
T  50364258 caacaattattgattaaaag-ttacatatttaatataaaaaacacaagttccaagtcaaagttactactttaaactt 50364333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 55; Significance: 1e-22; HSPs: 65)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 103 - 213
Target Start/End: Original strand, 12132052 - 12132162
Alignment:
Q  103 acaattatttattaaaaaattatatatttaatagaaaatacacaagtttcaatacaaacatactactttaaacttattaacgtatgcaaatttgcatatg 202  Q
    |||| ||||||||||||| |||||||||||||| |||||   |||||| |||||||||| |||||||||||| || ||||| | ||||| |||||| |||    
T  12132052 acaagtatttattaaaaagttatatatttaatataaaatgttcaagttccaatacaaacttactactttaaatttcttaacatgtgcaagtttgcagatg 12132151  T
Q  203 atagaaaaacc 213  Q
    |||||||||||    
T  12132152 atagaaaaacc 12132162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 105 - 211
Target Start/End: Complemental strand, 34741772 - 34741666
Alignment:
Q  105 aattatttattaaaaaattatatatttaatagaaaatacacaagtttcaatacaaacatactactttaaacttattaacgtatgcaaatttgcatatgat 204  Q
    ||||||||||||||||||||||||||||||| ||||| ||||||||  ||||||||| || || ||||||||| ||||| |   ||||||| ||||||||    
T  34741772 aattatttattaaaaaattatatatttaatataaaatgcacaagttctaatacaaacttattattttaaactttttaacatgaacaaatttacatatgat 34741673  T
Q  205 agaaaaa 211  Q
    |||||||    
T  34741672 agaaaaa 34741666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 104 - 213
Target Start/End: Complemental strand, 14961771 - 14961662
Alignment:
Q  104 caattatttattaaaaaattatatatttaatagaaaatacacaagtttcaatacaaacatactactttaaacttattaacgtatgcaaatttgcatatga 203  Q
    |||| |||||||||||| ||| |||||||||  ||||| |||||||| |||||||||  ||||| ||||||||| ||| | | |||||||||||| ||||    
T  14961771 caatcatttattaaaaagttaaatatttaatttaaaatgcacaagttccaatacaaaattactattttaaacttcttagcatgtgcaaatttgcacatga 14961672  T
Q  204 tagaaaaacc 213  Q
    ||||||||||    
T  14961671 tagaaaaacc 14961662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 101 - 213
Target Start/End: Original strand, 26682135 - 26682247
Alignment:
Q  101 caacaattatttattaaaaaattatatatttaatagaaaatacacaagtttcaatacaaacatactactttaaacttattaacgtatgcaaatttgcata 200  Q
    ||||||||||||||||||||  || | |||||||| ||||| |||||||| |||  ||||  |||||||||||| || ||||| | |||||||||||| |    
T  26682135 caacaattatttattaaaaagctacacatttaatataaaatgcacaagttccaagtcaaagttactactttaaatttcttaacatgtgcaaatttgcaca 26682234  T
Q  201 tgatagaaaaacc 213  Q
    |||||||||||||    
T  26682235 tgatagaaaaacc 26682247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 101 - 213
Target Start/End: Complemental strand, 28014969 - 28014857
Alignment:
Q  101 caacaattatttattaaaaaattatatatttaatagaaaatacacaagtttcaatacaaacatactactttaaacttattaacgtatgcaaatttgcata 200  Q
    ||||||||||||||| |||| || |||||||||||  ||||  ||||||| |||||||||  | ||| ||||||||| ||||| | |||||||||||| |    
T  28014969 caacaattatttattcaaaagttttatatttaatattaaatgtacaagttccaatacaaaatttctattttaaacttcttaacatgtgcaaatttgcaca 28014870  T
Q  201 tgatagaaaaacc 213  Q
    |||||||||||||    
T  28014869 tgatagaaaaacc 28014857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 101 - 213
Target Start/End: Complemental strand, 35678385 - 35678274
Alignment:
Q  101 caacaattatttattaaaaaattatatatttaatagaaaatacacaagtttcaatacaaacatactactttaaacttattaacgtatgcaaatttgcata 200  Q
    ||||||||| |||||||||| ||| |||||||||| ||| ||||||||||||||  ||||  ||||||||||||||| ||| | | |||||||||||| |    
T  35678385 caacaattaattattaaaaatttacatatttaatataaa-tacacaagtttcaagtcaaagttactactttaaacttcttatcatgtgcaaatttgcaca 35678287  T
Q  201 tgatagaaaaacc 213  Q
    ||||| |||||||    
T  35678286 tgataaaaaaacc 35678274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 102 - 213
Target Start/End: Original strand, 6818085 - 6818196
Alignment:
Q  102 aacaattatttattaaaaaattatatatttaatagaaaatacacaagtttcaatacaaacatactactttaaacttattaacgtatgcaaatttgcatat 201  Q
    ||||||||||||||||||| || |||| |||||| ||||| |||||||| | ||||||   ||||| ||||||||| ||||| | | |||||||||| ||    
T  6818085 aacaattatttattaaaaagttttatagttaatataaaatgcacaagttccgatacaattttactattttaaacttcttaacatgtacaaatttgcacat 6818184  T
Q  202 gatagaaaaacc 213  Q
    ||||||||||||    
T  6818185 gatagaaaaacc 6818196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 104 - 210
Target Start/End: Complemental strand, 7393352 - 7393247
Alignment:
Q  104 caattatttattaaaaaattatatatttaatagaaaatacacaagtttcaatacaaacatactactttaaacttattaacgtatgcaaatttgcatatga 203  Q
    ||||||||||||||||| |||||||||||||| |||||||||||||| ||| |||||  ||||| |||||| || ||||| | |||||||| ||| ||||    
T  7393352 caattatttattaaaaagttatatatttaatataaaatacacaagttacaagacaaa-ttactattttaaattttttaacatgtgcaaattcgcacatga 7393254  T
Q  204 tagaaaa 210  Q
    || ||||    
T  7393253 taaaaaa 7393247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 104 - 210
Target Start/End: Original strand, 20514703 - 20514809
Alignment:
Q  104 caattatttattaaaaaattatatatttaatagaaaatacacaagtttcaatacaaacatactactttaaacttattaacgtatgcaaatttgcatatga 203  Q
    ||||||||||||||||| |||||||||||||| |||||  ||||||| ||| |||||| ||| | |||||| || ||||| | ||||||| |||| ||||    
T  20514703 caattatttattaaaaagttatatatttaatataaaatgtacaagttccaagacaaacttaccattttaaatttcttaacctgtgcaaatatgcacatga 20514802  T
Q  204 tagaaaa 210  Q
    |||||||    
T  20514803 tagaaaa 20514809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 101 - 210
Target Start/End: Original strand, 44091385 - 44091494
Alignment:
Q  101 caacaattatttattaaaaaattatatatttaatagaaaatacacaagtttcaatacaaacatactactttaaacttattaacgtatgcaaatttgcata 200  Q
    ||||||||||||||||||||| || | |||||||| ||||| ||||||||  ||  ||||  |||||||||||| || ||||| ||||||||||| || |    
T  44091385 caacaattatttattaaaaaactacaaatttaatataaaatgcacaagttctaaatcaaagttactactttaaatttcttaacatatgcaaatttacaca 44091484  T
Q  201 tgatagaaaa 210  Q
    ||||||||||    
T  44091485 tgatagaaaa 44091494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 101 - 213
Target Start/End: Complemental strand, 3306166 - 3306054
Alignment:
Q  101 caacaattatttattaaaaaattatatatttaatagaaaatacacaagtttcaatacaaacatactactttaaacttattaacgtatgcaaatttgcata 200  Q
    |||||||||||||  ||||| |||||||||| ||| |||||   ||||||||||| ||||  ||||| |||||| || ||||| | |||||||||||| |    
T  3306166 caacaattatttaacaaaaagttatatatttgatacaaaatgttcaagtttcaatgcaaagttactattttaaatttcttaacatgtgcaaatttgcaca 3306067  T
Q  201 tgatagaaaaacc 213  Q
    |||||||||||||    
T  3306066 tgatagaaaaacc 3306054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 101 - 213
Target Start/End: Original strand, 9801736 - 9801847
Alignment:
Q  101 caacaattatttattaaaaaattatatatttaatagaaaatacacaagtttcaatacaaacatactactttaaacttattaacgtatgcaaatttgcata 200  Q
    ||||||||||| |||||||  |||||||||||||| || | ||| |||||||||  ||||  ||||||||||||||| ||||| | |||||||||||| |    
T  9801736 caacaattattgattaaaag-ttatatatttaatataacaaacataagtttcaagtcaaagttactactttaaacttcttaacatgtgcaaatttgcaca 9801834  T
Q  201 tgatagaaaaacc 213  Q
    |||| ||||||||    
T  9801835 tgattgaaaaacc 9801847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 101 - 213
Target Start/End: Complemental strand, 14816236 - 14816125
Alignment:
Q  101 caacaattatttattaaaaaattatatatttaatagaaaatacacaagtttcaatacaaacatactactttaaacttattaacgtatgcaaatttgcata 200  Q
    ||||||||| |||||||||| ||| |||||||||| ||| ||||||||||| ||  ||||  |||||||||||| || ||| | | |||||||||||| |    
T  14816236 caacaattaattattaaaaatttacatatttaatataaa-tacacaagttttaagtcaaagttactactttaaatttcttatcatgtgcaaatttgcaca 14816138  T
Q  201 tgatagaaaaacc 213  Q
    |||||||||||||    
T  14816137 tgatagaaaaacc 14816125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 101 - 213
Target Start/End: Original strand, 14829504 - 14829615
Alignment:
Q  101 caacaattatttattaaaaaattatatatttaatagaaaatacacaagtttcaatacaaacatactactttaaacttattaacgtatgcaaatttgcata 200  Q
    ||||||||| |||||||||| ||| |||||||||| ||| ||||||||||| ||  ||||  |||||||||||| || ||| | | |||||||||||| |    
T  14829504 caacaattaattattaaaaatttacatatttaatataaa-tacacaagttttaagtcaaagttactactttaaatttcttatcatgtgcaaatttgcaca 14829602  T
Q  201 tgatagaaaaacc 213  Q
    |||||||||||||    
T  14829603 tgatagaaaaacc 14829615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 101 - 213
Target Start/End: Complemental strand, 27874792 - 27874680
Alignment:
Q  101 caacaattatttattaaaaaattatatatttaatagaaaatacacaagtttcaatacaaacatactactttaaacttattaacgtatgcaaatttgcata 200  Q
    ||||||||||||||| |||| || |||||||||||  ||||  ||||||| |||||||||  |  || ||||||||| ||||| | |||||||||||| |    
T  27874792 caacaattatttattcaaaagttttatatttaatattaaatgtacaagttccaatacaaaatttgtattttaaacttcttaacatgtgcaaatttgcaca 27874693  T
Q  201 tgatagaaaaacc 213  Q
    |||||||||||||    
T  27874692 tgatagaaaaacc 27874680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 117 - 213
Target Start/End: Complemental strand, 39701898 - 39701802
Alignment:
Q  117 aaaaattatatatttaatagaaaatacacaagtttcaatacaaacatactactttaaacttattaacgtatgcaaatttgcatatgatagaaaaacc 213  Q
    |||| ||| |||||||||| |||| |||||| ||||||  ||||  ||||||||||||||| ||||| | |||||||||||| ||||||||||||||    
T  39701898 aaaagttacatatttaatataaaaaacacaaatttcaagtcaaagttactactttaaacttgttaacatgtgcaaatttgcacatgatagaaaaacc 39701802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 105 - 211
Target Start/End: Original strand, 9022106 - 9022215
Alignment:
Q  105 aattatttattaaaaaattatatatttaatagaaaata---cacaagtttcaatacaaacatactactttaaacttattaacgtatgcaaatttgcatat 201  Q
    |||||||||||||||| |||||||||||||| |||| |   |||||||| ||||||||| ||| |||||||||||| ||||| | || |||||||  |||    
T  9022106 aattatttattaaaaagttatatatttaataaaaaaaaatgcacaagttacaatacaaatatattactttaaactttttaacatgtgtaaatttgtttat 9022205  T
Q  202 gatagaaaaa 211  Q
    |||| |||||    
T  9022206 gataaaaaaa 9022215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 101 - 211
Target Start/End: Complemental strand, 13328051 - 13327942
Alignment:
Q  101 caacaattatttattaaaaaattatatatttaatagaaaatacacaagtttcaatacaaacatactactttaaacttattaacgtatgcaaatttgcata 200  Q
    ||||||||||| ||||||   ||| |||||||||| |||| |||||||||||||  ||||  ||||| ||||||||| ||||| | |||||||||||| |    
T  13328051 caacaattattgattaaatg-ttacatatttaatataaaaaacacaagtttcaagtcaaagttactaatttaaacttcttaacatgtgcaaatttgcaca 13327953  T
Q  201 tgatagaaaaa 211  Q
    |||||||||||    
T  13327952 tgatagaaaaa 13327942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 101 - 213
Target Start/End: Original strand, 2161454 - 2161566
Alignment:
Q  101 caacaattatttattaaaaaattatatatttaatagaaaatacacaagtttcaatacaaacatactactttaaacttattaacgtatgcaaatttgcata 200  Q
    |||||||||||||  ||||| |||||||||||||  |||||   |||||| |||| ||||  ||||| |||||| || ||||| | |||||||||||| |    
T  2161454 caacaattatttaacaaaaagttatatatttaattcaaaatgttcaagttccaatgcaaagttactattttaaatttcttaacatgtgcaaatttgcaca 2161553  T
Q  201 tgatagaaaaacc 213  Q
    |||||||||||||    
T  2161554 tgatagaaaaacc 2161566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 101 - 213
Target Start/End: Complemental strand, 7140569 - 7140458
Alignment:
Q  101 caacaattatttattaaaaaattatatatttaatagaaaatacacaagtttcaatacaaacatactactttaaacttattaacgtatgcaaatttgcata 200  Q
    ||||||||||| |||||||| | | |||||||||| |||| ||||||||| |||   |||  ||||||||||||||| ||||  | |||||||||||| |    
T  7140569 caacaattattgattaaaaact-acatatttaatataaaaaacacaagttccaagttaaaattactactttaaacttcttaatatgtgcaaatttgcaca 7140471  T
Q  201 tgatagaaaaacc 213  Q
    |||||||||||||    
T  7140470 tgatagaaaaacc 7140458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 101 - 213
Target Start/End: Complemental strand, 9580220 - 9580108
Alignment:
Q  101 caacaattatttattaaaaaattatatatttaatagaaaatacacaagtttcaatacaaacatactactttaaacttattaacgtatgcaaatttgcata 200  Q
    ||||||||||||||| |||||   |||||||||||  ||||  |||||||||||||||||  | ||| ||||||||| ||||| | || ||||||||| |    
T  9580220 caacaattatttattcaaaaaaattatatttaatattaaatgtacaagtttcaatacaaaatttctattttaaacttcttaacatgtgtaaatttgcaca 9580121  T
Q  201 tgatagaaaaacc 213  Q
    ||||| |||||||    
T  9580120 tgataaaaaaacc 9580108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 101 - 213
Target Start/End: Original strand, 10129171 - 10129282
Alignment:
Q  101 caacaattatttattaaaaaattatatatttaatagaaaatacacaagtttcaatacaaacatactactttaaacttattaacgtatgcaaatttgcata 200  Q
    ||||||||||| |||||||  | | |||||||||| |||| ||||||||| |||   |||  ||||||||||||||| ||||| | |||||||||||| |    
T  10129171 caacaattattgattaaaagct-acatatttaatataaaaaacacaagttccaagttaaaattactactttaaacttcttaacatgtgcaaatttgcaca 10129269  T
Q  201 tgatagaaaaacc 213  Q
    |||||||||||||    
T  10129270 tgatagaaaaacc 10129282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 101 - 213
Target Start/End: Complemental strand, 12189699 - 12189587
Alignment:
Q  101 caacaattatttattaaaaaattatatatttaatagaaaatacacaagtttcaatacaaacatactactttaaacttattaacgtatgcaaatttgcata 200  Q
    ||||||||||||||| ||||| | |||||||||||  ||||  ||||||| ||||| |||  | ||| ||||||||| ||| | | |||||||||||| |    
T  12189699 caacaattatttattcaaaaaatttatatttaatattaaatgtacaagttccaatataaagtttctattttaaacttcttatcatgtgcaaatttgcaca 12189600  T
Q  201 tgatagaaaaacc 213  Q
    |||||||||||||    
T  12189599 tgatagaaaaacc 12189587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 101 - 213
Target Start/End: Complemental strand, 12434127 - 12434015
Alignment:
Q  101 caacaattatttattaaaaaattatatatttaatagaaaatacacaagtttcaatacaaacatactactttaaacttattaacgtatgcaaatttgcata 200  Q
    ||||||||||||||| ||||| | |||||||||||  ||||  ||||||| ||||| |||  | ||| ||||||||| ||| | | |||||||||||| |    
T  12434127 caacaattatttattcaaaaaatttatatttaatattaaatgtacaagttccaatataaagtttctattttaaacttcttatcatgtgcaaatttgcaca 12434028  T
Q  201 tgatagaaaaacc 213  Q
    |||||||||||||    
T  12434027 tgatagaaaaacc 12434015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 102 - 213
Target Start/End: Complemental strand, 32089577 - 32089465
Alignment:
Q  102 aacaattatttattaaaaaat-tatatatttaatagaaaatacacaagtttcaatacaaacatactactttaaacttattaacgtatgcaaatttgcata 200  Q
    ||||||||||||||||||| | || |||| ||||| ||| | |||||||||| ||| || | ||||| ||||||||  ||||| | ||||||||||||||    
T  32089577 aacaattatttattaaaaattatacatatataatataaagtgcacaagtttcgataaaatcttactattttaaactgcttaacatgtgcaaatttgcata 32089478  T
Q  201 tgatagaaaaacc 213  Q
    | |||||||||||    
T  32089477 taatagaaaaacc 32089465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 101 - 177
Target Start/End: Original strand, 35583434 - 35583509
Alignment:
Q  101 caacaattatttattaaaaaattatatatttaatagaaaatacacaagtttcaatacaaacatactactttaaactt 177  Q
    |||||||||||| |||||| ||||||||||||||| |||||||||||||||||||  |||| || || |||||||||    
T  35583434 caacaattatttgttaaaa-attatatatttaatacaaaatacacaagtttcaatgtaaacttaatattttaaactt 35583509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 101 - 213
Target Start/End: Complemental strand, 39024968 - 39024856
Alignment:
Q  101 caacaattatttattaaaaaattatatatttaatagaaaatacacaagtttcaatacaaacatactactttaaacttattaacgtatgcaaatttgcata 200  Q
    ||||||||| ||||||||||  || ||| |||||| ||||| ||||| || |||  ||||  ||||||||||||||| ||| | | |||||||||||| |    
T  39024968 caacaattaattattaaaaatctacatagttaatataaaatgcacaaattccaagtcaaagttactactttaaacttcttatcatgtgcaaatttgcaca 39024869  T
Q  201 tgatagaaaaacc 213  Q
    |||||||||||||    
T  39024868 tgatagaaaaacc 39024856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 101 - 213
Target Start/End: Original strand, 45006037 - 45006148
Alignment:
Q  101 caacaattatttattaaaaaattatatatttaatagaaaatacacaagtttcaatacaaacatactactttaaacttattaacgtatgcaaatttgcata 200  Q
    ||||||||||||||| |||| || |||||||||||  | ||  ||| ||| ||||||||| || ||| ||||||||| ||||| | ||||||||||| ||    
T  45006037 caacaattatttattcaaaagttttatatttaatattagatgtacatgttccaatacaaa-attctattttaaacttcttaacatgtgcaaatttgctta 45006135  T
Q  201 tgatagaaaaacc 213  Q
    |||||||||||||    
T  45006136 tgatagaaaaacc 45006148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 146 - 213
Target Start/End: Original strand, 7977990 - 7978057
Alignment:
Q  146 aagtttcaatacaaacatactactttaaacttattaacgtatgcaaatttgcatatgatagaaaaacc 213  Q
    |||||||||||||||  ||| | ||||||||| ||||| | |||||||||||||||||||||||||||    
T  7977990 aagtttcaatacaaaattaccattttaaactttttaacatttgcaaatttgcatatgatagaaaaacc 7978057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 101 - 212
Target Start/End: Complemental strand, 40226098 - 40225987
Alignment:
Q  101 caacaattatttattaaaaaattatatatttaatagaaaatacacaagtttcaatacaaacatactactttaaacttattaacgtatgcaaatttgcata 200  Q
    ||||||||||||||| |||||||||||||||| || |||||  | || ||||||| ||||  | | | | ||||||| ||||| | |||||||||||| |    
T  40226098 caacaattatttatttaaaaattatatatttattacaaaatgtataaatttcaatgcaaaatttcaattataaacttcttaacatgtgcaaatttgcaca 40225999  T
Q  201 tgatagaaaaac 212  Q
    ||||||||||||    
T  40225998 tgatagaaaaac 40225987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 102 - 211
Target Start/End: Complemental strand, 4080503 - 4080395
Alignment:
Q  102 aacaattatttattaaaaaattatatatttaatagaaaatacacaagtttcaatacaaacatactactttaaacttattaacgtatgcaaatttgcatat 201  Q
    |||||||| ||| |||||| ||| |||||||||| ||| | ||||||||||||  ||||  |||||||||||| || ||| | | |||||||||||| ||    
T  4080503 aacaattaattactaaaaatttacatatttaatataaa-tgcacaagtttcaagtcaaagttactactttaaatttcttatcatgtgcaaatttgcacat 4080405  T
Q  202 gatagaaaaa 211  Q
    ||||||||||    
T  4080404 gatagaaaaa 4080395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 101 - 213
Target Start/End: Complemental strand, 18567526 - 18567415
Alignment:
Q  101 caacaattatttattaaaaaattatatatttaatagaaaatacacaagtttcaatacaaacatactactttaaacttattaacgtatgcaaatttgcata 200  Q
    ||||||||||| ||||||   ||| |||||||||| |||| ||||| ||| |||  ||||  ||||| ||||||||| ||||| | |||||||||||| |    
T  18567526 caacaattattgattaaatg-ttacatatttaatataaaaaacacatgttccaagtcaaagttactaatttaaacttcttaacatgtgcaaatttgcaca 18567428  T
Q  201 tgatagaaaaacc 213  Q
    |||||||||||||    
T  18567427 tgatagaaaaacc 18567415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 101 - 213
Target Start/End: Complemental strand, 26364101 - 26363989
Alignment:
Q  101 caacaattatttattaaaaaattatatatttaatagaaaatacacaagtttcaatacaaacatactactttaaacttattaacgtatgcaaatttgcata 200  Q
    |||||||||||||  ||||| ||||| | ||||||||||||   |||||| |||| ||||  ||||| |||||| || ||||| |  ||||||||||| |    
T  26364101 caacaattatttaacaaaaagttatacaattaatagaaaatgttcaagttccaatgcaaagttactattttaaatttcttaacatgcgcaaatttgcaca 26364002  T
Q  201 tgatagaaaaacc 213  Q
    |||||||||||||    
T  26364001 tgatagaaaaacc 26363989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 101 - 205
Target Start/End: Complemental strand, 36967181 - 36967077
Alignment:
Q  101 caacaattatttattaaaaaattatatatttaatagaaaatacacaagtttcaatacaaacatactactttaaacttattaacgtatgcaaatttgcata 200  Q
    |||||||||| |||| |||| || |||||||||||  ||||   ||||||||||||||||  | ||| ||||||||| ||||| | |||||||||||| |    
T  36967181 caacaattatatattcaaaagttttatatttaatattaaatgtgcaagtttcaatacaaagtttctattttaaacttcttaacatgtgcaaatttgcaca 36967082  T
Q  201 tgata 205  Q
    |||||    
T  36967081 tgata 36967077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 104 - 212
Target Start/End: Complemental strand, 38213052 - 38212944
Alignment:
Q  104 caattatttattaaaaaattatatatttaatagaaaatacacaagtttcaatacaaacatactactttaaacttattaacgtatgcaaatttgcatatga 203  Q
    |||||||| ||| |||| || |||||||||||  | ||  ||||||||||||| |||  | ||| ||||||||| ||||| | |||||||||||| ||||    
T  38213052 caattattcatttaaaagttttatatttaatattacatgtacaagtttcaatataaaatttctattttaaacttcttaacatgtgcaaatttgcacatga 38212953  T
Q  204 tagaaaaac 212  Q
    |||||||||    
T  38212952 tagaaaaac 38212944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 126 - 213
Target Start/End: Original strand, 1203693 - 1203780
Alignment:
Q  126 atatttaatagaaaatacacaagtttcaatacaaacatactactttaaacttattaacgtatgcaaatttgcatatgatagaaaaacc 213  Q
    |||||||||| |||| ||||||||||  |  ||||  ||||||||||||||| ||| | | |||||||||||| ||||||||||||||    
T  1203693 atatttaatataaaaaacacaagtttttaatcaaaattactactttaaacttcttatcatgtgcaaatttgcacatgatagaaaaacc 1203780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 102 - 160
Target Start/End: Complemental strand, 28869572 - 28869513
Alignment:
Q  102 aacaattatttattaaaaaattatatatttaat-agaaaatacacaagtttcaatacaaa 160  Q
    ||||| ||||||||||||||||||||||||||| | ||||| ||||||||| ||||||||    
T  28869572 aacaactatttattaaaaaattatatatttaataaaaaaattcacaagttttaatacaaa 28869513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 111 - 213
Target Start/End: Original strand, 29642679 - 29642782
Alignment:
Q  111 ttattaaaaaattatatatttaatagaaaata-cacaagtttcaatacaaacatactactttaaacttattaacgtatgcaaatttgcatatgatagaaa 209  Q
    |||||||||| || | ||||||||| |||| | |||||||||||| |||||| ||| | |||||| |  ||| | |||||||||||||| ||||||||||    
T  29642679 ttattaaaaagttgtctatttaatataaaaaaacacaagtttcaagacaaacttaccattttaaattccttatcatatgcaaatttgcacatgatagaaa 29642778  T
Q  210 aacc 213  Q
    ||||    
T  29642779 aacc 29642782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 102 - 160
Target Start/End: Complemental strand, 1844670 - 1844612
Alignment:
Q  102 aacaattatttattaaaaaattatatatttaatagaaaatacacaagtttcaatacaaa 160  Q
    ||||||||||||||||||| ||| |||||||||| |||||||| || |||| |||||||    
T  1844670 aacaattatttattaaaaagttaaatatttaatataaaatacataaatttcgatacaaa 1844612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 107 - 213
Target Start/End: Original strand, 26834634 - 26834740
Alignment:
Q  107 ttatttattaaaaaattatatatttaatagaaaatacacaagtttcaatacaaacatactactttaaacttattaacgtatgcaaatttgcatatgatag 206  Q
    ||||||||||||||  || ||||||||||  |||| |||||||| |||  ||||  ||| | |||||| || ||||  |||||||||||||| |||||||    
T  26834634 ttatttattaaaaagctacatatttaatatgaaatgcacaagttccaagtcaaaattaccattttaaatttcttaatatatgcaaatttgcacatgatag 26834733  T
Q  207 aaaaacc 213  Q
    |||||||    
T  26834734 aaaaacc 26834740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 107 - 213
Target Start/End: Original strand, 31812186 - 31812292
Alignment:
Q  107 ttatttattaaaaaattatatatttaatagaaaatacacaagtttcaatacaaacatactactttaaacttattaacgtatgcaaatttgcatatgatag 206  Q
    ||||||||||||||  || ||||||||||  |||| |||||||| |||  ||||  ||| | ||||||||| ||||  | |||||||||||| |||||||    
T  31812186 ttatttattaaaaagctacatatttaatatgaaatgcacaagttccaagtcaaaattaccattttaaacttcttaatatgtgcaaatttgcacatgatag 31812285  T
Q  207 aaaaacc 213  Q
    |||||||    
T  31812286 aaaaacc 31812292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 102 - 211
Target Start/End: Complemental strand, 4084652 - 4084544
Alignment:
Q  102 aacaattatttattaaaaaattatatatttaatagaaaatacacaagtttcaatacaaacatactactttaaacttattaacgtatgcaaatttgcatat 201  Q
    |||||||| ||| |||||| ||| |||||||||| ||| | || |||||||||  ||||  |||||||||||| || ||| | | |||||||||||| ||    
T  4084652 aacaattaattactaaaaatttacatatttaatataaa-tgcataagtttcaagtcaaagttactactttaaatttcttatcatgtgcaaatttgcacat 4084554  T
Q  202 gatagaaaaa 211  Q
    ||||||||||    
T  4084553 gatagaaaaa 4084544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 102 - 211
Target Start/End: Complemental strand, 4102959 - 4102851
Alignment:
Q  102 aacaattatttattaaaaaattatatatttaatagaaaatacacaagtttcaatacaaacatactactttaaacttattaacgtatgcaaatttgcatat 201  Q
    |||||||| ||| |||||| ||| |||||||||| ||| | || |||||||||  ||||  |||||||||||| || ||| | | |||||||||||| ||    
T  4102959 aacaattaattactaaaaatttacatatttaatataaa-tgcaaaagtttcaagtcaaagttactactttaaatttcttatcatgtgcaaatttgcacat 4102861  T
Q  202 gatagaaaaa 211  Q
    ||||||||||    
T  4102860 gatagaaaaa 4102851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 124 - 213
Target Start/End: Complemental strand, 15198988 - 15198899
Alignment:
Q  124 atatatttaatagaaaatacacaagtttcaatacaaacatactactttaaacttattaacgtatgcaaatttgcatatgatagaaaaacc 213  Q
    |||||||||||  |||||| ||||||| |||| ||||  ||||| || ||| || ||||| | |||||||||||| ||||||||||||||    
T  15198988 atatatttaattcaaaatatacaagttacaatgcaaagttactatttaaaattttttaacatgtgcaaatttgcacatgatagaaaaacc 15198899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 105 - 161
Target Start/End: Original strand, 34249748 - 34249805
Alignment:
Q  105 aattatttattaaaaaa-ttatatatttaatagaaaatacacaagtttcaatacaaac 161  Q
    ||||||||||||||||| ||| |||||||||| |||||||||||||| ||| ||||||    
T  34249748 aattatttattaaaaaagttaaatatttaatataaaatacacaagttccaagacaaac 34249805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 123 - 211
Target Start/End: Complemental strand, 42283 - 42195
Alignment:
Q  123 tatatatttaatagaaaatacacaagtttcaatacaaacatactactttaaacttattaacgtatgcaaatttgcatatgatagaaaaa 211  Q
    ||||||||||||  |||||||||||||||||||| |||| ||| ||||||   |  ||||| | |||||||||||| ||| ||||||||    
T  42283 tatatatttaatgtaaaatacacaagtttcaatataaacttaccactttagtatccttaacatgtgcaaatttgcacatgttagaaaaa 42195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 117 - 197
Target Start/End: Original strand, 297178 - 297258
Alignment:
Q  117 aaaaattatatatttaatagaaaatacacaagtttcaatacaaacatactactttaaacttattaacgtatgcaaatttgc 197  Q
    |||| ||||||||| |||| |||||  |||||||||||||||||  || || ||||||||| ||||| | |||||||||||    
T  297178 aaaagttatatattaaatacaaaatgtacaagtttcaatacaaagttattattttaaacttcttaacatgtgcaaatttgc 297258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 102 - 213
Target Start/End: Complemental strand, 8284679 - 8284567
Alignment:
Q  102 aacaattatttattaaaaa-attatatatttaatagaaaatacacaagtttcaatacaaacatactactttaaacttattaacgtatgcaaatttgcata 200  Q
    ||||||||||||||||||| |  |  ||||||||| |||||||||||||| |||  | ||  | ||| ||||||||| ||||| | | |||||||||| |    
T  8284679 aacaattatttattaaaaagaccacctatttaatataaaatacacaagttccaagtcgaagttgctaatttaaacttcttaacatgtacaaatttgcaca 8284580  T
Q  201 tgatagaaaaacc 213  Q
    |||||||||||||    
T  8284579 tgatagaaaaacc 8284567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 123 - 211
Target Start/End: Complemental strand, 10543718 - 10543630
Alignment:
Q  123 tatatatttaatagaaaatacacaagtttcaatacaaacatactactttaaacttattaacgtatgcaaatttgcatatgatagaaaaa 211  Q
    ||||||||||||  |||||||||||||| ||||| |||| ||||||||||   |  ||||| | |||||||||||| ||| ||||||||    
T  10543718 tatatatttaatgtaaaatacacaagttccaatataaacttactactttagtatccttaacatgtgcaaatttgcacatgttagaaaaa 10543630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 101 - 213
Target Start/End: Original strand, 38843771 - 38843883
Alignment:
Q  101 caacaattatttattaaaaaattatatatttaatagaaaatacacaagtttcaatacaaacatactactttaaacttattaacgtatgcaaatttgcata 200  Q
    ||||||||||||||| |||| || |||||||||||  ||||  ||||||| ||||| |||  |  || ||||||||| ||| | | ||||||||| || |    
T  38843771 caacaattatttattcaaaagttttatatttaatattaaatgtacaagttccaataaaaaatttatattttaaacttcttagcatgtgcaaatttacaca 38843870  T
Q  201 tgatagaaaaacc 213  Q
    |||||||||||||    
T  38843871 tgatagaaaaacc 38843883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 123 - 211
Target Start/End: Original strand, 42781563 - 42781651
Alignment:
Q  123 tatatatttaatagaaaatacacaagtttcaatacaaacatactactttaaacttattaacgtatgcaaatttgcatatgatagaaaaa 211  Q
    ||||||||||||  | |||||||||||||||||| |||| ||||||||||   |  ||||| | |||||||||||| ||| ||||||||    
T  42781563 tatatatttaatgtataatacacaagtttcaatataaacttactactttagtatccttaacatgtgcaaatttgcacatgttagaaaaa 42781651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 101 - 212
Target Start/End: Complemental strand, 16445846 - 16445736
Alignment:
Q  101 caacaattatttattaaaaaattatatatttaatagaaaatacacaagtttcaatacaaacatactactttaaacttattaacgtatgcaaatttgcata 200  Q
    ||||||||||||||| |||| || |||||||||||  ||||  || |||| |||||||||  | ||| ||||||||| ||||  | |||||||||||| |    
T  16445846 caacaattatttattcaaaagttttatatttaatattaaatgtac-agttccaatacaaaatttctattttaaacttcttaatatgtgcaaatttgcaca 16445748  T
Q  201 tgatagaaaaac 212  Q
    | ||||||||||    
T  16445747 taatagaaaaac 16445736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 124 - 212
Target Start/End: Complemental strand, 26195349 - 26195259
Alignment:
Q  124 atatatttaatagaaaatacacaagtttcaatacaaacatactactttaaacttattaac--gtatgcaaatttgcatatgatagaaaaac 212  Q
    |||||||||||| ||||| |||||||||||| ||||||  |  |||||||| ||||||||  || || |||||| || |||||||||||||    
T  26195349 atatatttaatataaaatgcacaagtttcaagacaaactcatcactttaaatttattaacatgtgtgtaaatttacacatgatagaaaaac 26195259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 153 - 211
Target Start/End: Complemental strand, 28866990 - 28866932
Alignment:
Q  153 aatacaaacatactactttaaacttattaacgtatgcaaatttgcatatgatagaaaaa 211  Q
    |||||||||||| || ||||||||| ||||  ||| |||||||||| ||||||||||||    
T  28866990 aatacaaacatattattttaaacttcttaatatatacaaatttgcacatgatagaaaaa 28866932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 169 - 211
Target Start/End: Original strand, 32186321 - 32186363
Alignment:
Q  169 tttaaacttattaacgtatgcaaatttgcatatgatagaaaaa 211  Q
    ||||||||||||||| |||||||||||||| | ||||||||||    
T  32186321 tttaaacttattaacatatgcaaatttgcacacgatagaaaaa 32186363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 169 - 211
Target Start/End: Complemental strand, 34107213 - 34107171
Alignment:
Q  169 tttaaacttattaacgtatgcaaatttgcatatgatagaaaaa 211  Q
    ||||||||| ||||| |||| ||||||||||||||||||||||    
T  34107213 tttaaacttcttaacatatgtaaatttgcatatgatagaaaaa 34107171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 101 - 213
Target Start/End: Original strand, 5573355 - 5573465
Alignment:
Q  101 caacaattatttattaaaaaattatatatttaatagaaaatacacaagtttcaatacaaacatactactttaaacttattaacgtatgcaaatttgcata 200  Q
    ||||||| |||||||||||| ||||||||  |||| |||||  | |||||  ||| ||||  || || ||||||||| ||||| | | |||||||||| |    
T  5573355 caacaatcatttattaaaaagttatatat--aatacaaaatgtataagttctaatgcaaaagtattattttaaacttcttaacatgtacaaatttgcaca 5573452  T
Q  201 tgatagaaaaacc 213  Q
    |||||||||||||    
T  5573453 tgatagaaaaacc 5573465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 144 - 213
Target Start/End: Complemental strand, 19343904 - 19343835
Alignment:
Q  144 acaagtttcaatacaaacatactactttaaacttattaacgtatgcaaatttgcatatgatagaaaaacc 213  Q
    |||||||||||  ||||  ||||||||||||| | ||||| | |||||||||||| |||||| |||||||    
T  19343904 acaagtttcaagtcaaaattactactttaaacgtgttaacatgtgcaaatttgcacatgataaaaaaacc 19343835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 137 - 182
Target Start/End: Original strand, 28869376 - 28869421
Alignment:
Q  137 aaaatacacaagtttcaatacaaacatactactttaaacttattaa 182  Q
    ||||| ||||||||| |||||||||||| |||||||||||| ||||    
T  28869376 aaaattcacaagttttaatacaaacatattactttaaacttcttaa 28869421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 105 - 154
Target Start/End: Original strand, 31133907 - 31133955
Alignment:
Q  105 aattatttattaaaaaattatatatttaatagaaaatacacaagtttcaa 154  Q
    |||||||||||||||| || ||||||||||| |||||||||| |||||||    
T  31133907 aattatttattaaaaagtt-tatatttaatataaaatacacaggtttcaa 31133955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 101 - 174
Target Start/End: Complemental strand, 44222545 - 44222473
Alignment:
Q  101 caacaattatttattaaaaaattatatatttaatagaaaatacacaagtttcaatacaaacatactactttaaa 174  Q
    ||||||||||||||||||||  ||||||||| ||| |||||||| | ||||| |||||||| ||| | ||||||    
T  44222545 caacaattatttattaaaaatgtatatattt-atataaaatacatacgtttccatacaaacttacaattttaaa 44222473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 101 - 177
Target Start/End: Original strand, 9743929 - 9744004
Alignment:
Q  101 caacaattatttattaaaaaattatatatttaatagaaaatacacaagtttcaatacaaacatactactttaaactt 177  Q
    |||||||||||||||||||  ||| |||||||||| |||| ||| ||||| |||  ||||  |||||||||||||||    
T  9743929 caacaattatttattaaaag-ttacatatttaatataaaaaacataagttccaagtcaaagttactactttaaactt 9744004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 164 - 212
Target Start/End: Complemental strand, 13496757 - 13496709
Alignment:
Q  164 actactttaaacttattaacgtatgcaaatttgcatatgatagaaaaac 212  Q
    |||| ||||||||| ||||| | |||||||||||| |||||||||||||    
T  13496757 actattttaaacttcttaacatgtgcaaatttgcacatgatagaaaaac 13496709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #64
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 123 - 211
Target Start/End: Complemental strand, 16586811 - 16586723
Alignment:
Q  123 tatatatttaatagaaaatacacaagtttcaatacaaacatactactttaaacttattaacgtatgcaaatttgcatatgatagaaaaa 211  Q
    ||||||||||||  | |||||||||||| ||||| |||| ||||||||||   |  ||||| | |||||||||||| ||| ||||||||    
T  16586811 tatatatttaatgtacaatacacaagttccaatataaacttactactttagtatccttaacatgtgcaaatttgcacatgttagaaaaa 16586723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #65
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 104 - 160
Target Start/End: Complemental strand, 38048045 - 38047989
Alignment:
Q  104 caattatttattaaaaaattatatatttaatagaaaatacacaagtttcaatacaaa 160  Q
    |||||||||||||||||| | ||||||||| | ||||||||||| || ||| |||||    
T  38048045 caattatttattaaaaaaatgtatatttaagataaaatacacaaattccaagacaaa 38047989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 53; Significance: 2e-21; HSPs: 34)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 105 - 173
Target Start/End: Original strand, 31039775 - 31039843
Alignment:
Q  105 aattatttattaaaaaattatatatttaatagaaaatacacaagtttcaatacaaacatactactttaa 173  Q
    |||||||||||||||| |||||| | |||||||||||||||||||| ||||||||||||||||||||||    
T  31039775 aattatttattaaaaagttatatttataatagaaaatacacaagttacaatacaaacatactactttaa 31039843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 107 - 212
Target Start/End: Original strand, 10887102 - 10887207
Alignment:
Q  107 ttatttattaaaaaattatatatttaatagaaaatacacaagtttcaatacaaacatactactttaaacttattaacgtatgcaaatttgcatatgatag 206  Q
    ||||||||||||||  || |||||||||| |||||||||||||| |||  ||||  ||| ||||||||||| ||||| | |||||||||||| |||||||    
T  10887102 ttatttattaaaaagctacatatttaatataaaatacacaagttccaaatcaaaattaccactttaaacttcttaacatgtgcaaatttgcacatgatag 10887201  T
Q  207 aaaaac 212  Q
    ||||||    
T  10887202 aaaaac 10887207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 101 - 211
Target Start/End: Original strand, 6016923 - 6017033
Alignment:
Q  101 caacaattatttattaaaaaattatatatttaatagaaaatacacaagtttcaatacaaacatactactttaaacttattaacgtatgcaaatttgcata 200  Q
    ||||| |||||| ||||||| ||||||||||||||  |||| |||||||| |||  ||||  ||| ||||||||||| ||||| | |||||||||||| |    
T  6016923 caacacttattttttaaaaagttatatatttaatatgaaatgcacaagttccaagtcaaagttaccactttaaactttttaacatgtgcaaatttgcaca 6017022  T
Q  201 tgatagaaaaa 211  Q
    |||||||||||    
T  6017023 tgatagaaaaa 6017033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 111 - 211
Target Start/End: Original strand, 31503818 - 31503919
Alignment:
Q  111 ttattaaaaa-attatatatttaatagaaaatacacaagtttcaatacaaacatactactttaaacttattaacgtatgcaaatttgcatatgatagaaa 209  Q
    |||||||||| | ||||||||||||| |||||||||||||| ||||| |||| |||||||||||| || ||||| | |||||||||||| ||  ||||||    
T  31503818 ttattaaaaagaatatatatttaatataaaatacacaagttccaatataaacttactactttaaatttcttaacatgtgcaaatttgcacatattagaaa 31503917  T
Q  210 aa 211  Q
    ||    
T  31503918 aa 31503919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 101 - 213
Target Start/End: Complemental strand, 14228237 - 14228125
Alignment:
Q  101 caacaattatttattaaaaaattatatatttaatagaaaatacacaagtttcaatacaaacatactactttaaacttattaacgtatgcaaatttgcata 200  Q
    |||||||||||||  ||||| |||||||||||||| |||||   |||||| |||| ||||  ||||| |||||| || ||||| | |||||||||||| |    
T  14228237 caacaattatttaacaaaaagttatatatttaatacaaaatgttcaagttccaatgcaaagttactattttaaatttcttaacatgtgcaaatttgcaca 14228138  T
Q  201 tgatagaaaaacc 213  Q
    |||||||||||||    
T  14228137 tgatagaaaaacc 14228125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 101 - 213
Target Start/End: Complemental strand, 17552698 - 17552586
Alignment:
Q  101 caacaattatttattaaaaaattatatatttaatagaaaatacacaagtttcaatacaaacatactactttaaacttattaacgtatgcaaatttgcata 200  Q
    |||||||||||||  |||||||||||||||||||| |||||   |||||| |||| || |  ||||| |||||| || ||||| | |||||||||||| |    
T  17552698 caacaattatttaacaaaaaattatatatttaatacaaaatgttcaagttccaatgcataattactattttaaatttcttaacatgtgcaaatttgcaca 17552599  T
Q  201 tgatagaaaaacc 213  Q
    |||||||||||||    
T  17552598 tgatagaaaaacc 17552586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 101 - 213
Target Start/End: Complemental strand, 28943880 - 28943768
Alignment:
Q  101 caacaattatttattaaaaaattatatatttaatagaaaatacacaagtttcaatacaaacatactactttaaacttattaacgtatgcaaatttgcata 200  Q
    |||||||||||||  ||||| |||||||||||||| |||||   |||||| |||| ||||  ||||| |||||| || ||||| | |||||||||||| |    
T  28943880 caacaattatttaacaaaaagttatatatttaatacaaaatgttcaagttccaatgcaaagttactattttaaatttcttaacatgtgcaaatttgcaca 28943781  T
Q  201 tgatagaaaaacc 213  Q
    |||||||||||||    
T  28943780 tgatagaaaaacc 28943768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 101 - 213
Target Start/End: Original strand, 31568177 - 31568288
Alignment:
Q  101 caacaattatttattaaaaaattatatatttaatagaaaatacacaagtttcaatacaaacatactactttaaacttattaacgtatgcaaatttgcata 200  Q
    |||||||| |||||| ||||  || ||||||| || |||| |||||||||||||  ||||  ||||||||||||||| ||||| | |||||||||||| |    
T  31568177 caacaatt-tttattcaaaagctacatatttattataaaaaacacaagtttcaaatcaaagttactactttaaactttttaacatgtgcaaatttgcaca 31568275  T
Q  201 tgatagaaaaacc 213  Q
    |||||||||||||    
T  31568276 tgatagaaaaacc 31568288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 105 - 213
Target Start/End: Original strand, 34692425 - 34692533
Alignment:
Q  105 aattatttattaaaaaattatatatttaatagaaaatacacaagtttcaatacaaacatactactttaaacttattaacgtatgcaaatttgcatatgat 204  Q
    ||||||||||| |||| || |||||||||||  ||||  ||||||| |||||||||  | ||| ||||||||| ||||| | |||||||||||| |||||    
T  34692425 aattatttatttaaaagttttatatttaatattaaatgtacaagttccaatacaaaatttctattttaaacttcttaacatgtgcaaatttgcacatgat 34692524  T
Q  205 agaaaaacc 213  Q
    |||||||||    
T  34692525 agaaaaacc 34692533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 101 - 183
Target Start/End: Complemental strand, 1017889 - 1017807
Alignment:
Q  101 caacaattatttattaaaaaattatatatttaatagaaaatacacaagtttcaatacaaacatactactttaaacttattaac 183  Q
    |||||||||||||||||||| ||| |||||||||| ||||| ||||| ||||||  ||||  ||||||||||||||| |||||    
T  1017889 caacaattatttattaaaaatttacatatttaatataaaatgcacaactttcaagtcaaagttactactttaaacttcttaac 1017807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 101 - 211
Target Start/End: Complemental strand, 8977577 - 8977467
Alignment:
Q  101 caacaattatttattaaaaaattatatatttaatagaaaatacacaagtttcaatacaaacatactactttaaacttattaacgtatgcaaatttgcata 200  Q
    ||||||| ||||||| |||| ||| |||||||||| ||||| |||||||| |||||||||  ||||| ||| ||||| |||||   ||||||||| || |    
T  8977577 caacaatcatttattgaaaagttacatatttaatataaaatgcacaagttacaatacaaatttactattttgaacttcttaacaagtgcaaatttacaca 8977478  T
Q  201 tgatagaaaaa 211  Q
    |||||||||||    
T  8977477 tgatagaaaaa 8977467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 103 - 212
Target Start/End: Complemental strand, 30591272 - 30591163
Alignment:
Q  103 acaattatttattaaaaaattatatatttaatagaaaatacacaagtttcaatacaaacatactactttaaacttattaacgtatgcaaatttgcatatg 202  Q
    |||||||||||| ||||| ||||| |||||||| |||||| ||||||| |||| ||||  ||| | || |||||| ||||| | || ||||||||| |||    
T  30591272 acaattatttatcaaaaagttatacatttaatacaaaatatacaagttacaatgcaaaattaccatttaaaacttcttaacatgtgtaaatttgcacatg 30591173  T
Q  203 atagaaaaac 212  Q
    ||||||||||    
T  30591172 atagaaaaac 30591163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 101 - 213
Target Start/End: Original strand, 17596408 - 17596520
Alignment:
Q  101 caacaattatttattaaaaaattatatatttaatagaaaatacacaagtttcaatacaaacatactactttaaacttattaacgtatgcaaatttgcata 200  Q
    ||||||||| ||||||||||  || ||| |||||| ||||| |||||||| |||  ||||  ||||||||||||||| ||| | | | |||||||||| |    
T  17596408 caacaattaattattaaaaatctacatagttaatataaaatgcacaagttccaaatcaaagttactactttaaacttcttatcatgtacaaatttgcaca 17596507  T
Q  201 tgatagaaaaacc 213  Q
    |||||||||||||    
T  17596508 tgatagaaaaacc 17596520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 105 - 213
Target Start/End: Complemental strand, 29863409 - 29863301
Alignment:
Q  105 aattatttattaaaaaattatatatttaatagaaaatacacaagtttcaatacaaacatactactttaaacttattaacgtatgcaaatttgcatatgat 204  Q
    |||||||||||||||| || |||| |||||| ||||| || ||||| | | ||||   ||||| ||||||||| ||||| | |||||||||||| |||||    
T  29863409 aattatttattaaaaagttttatagttaatataaaatgcaaaagttccgacacaattttactattttaaacttcttaacatgtgcaaatttgcacatgat 29863310  T
Q  205 agaaaaacc 213  Q
    |||||||||    
T  29863309 agaaaaacc 29863301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 105 - 213
Target Start/End: Complemental strand, 31169870 - 31169762
Alignment:
Q  105 aattatttattaaaaaattatatatttaatagaaaatacacaagtttcaatacaaacatactactttaaacttattaacgtatgcaaatttgcatatgat 204  Q
    ||||| ||||||||||  || |||||||||| ||||| |||||||| |||  ||||  |||||||||||| || ||||| | ||||||||| || |||||    
T  31169870 aattaattattaaaaacctacatatttaatataaaatgcacaagttccaagtcaaagttactactttaaatttgttaacatgtgcaaatttacacatgat 31169771  T
Q  205 agaaaaacc 213  Q
    |||||||||    
T  31169770 agaaaaacc 31169762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 111 - 204
Target Start/End: Original strand, 17154700 - 17154793
Alignment:
Q  111 ttattaaaaaattatatatttaatagaaaatacacaagtttcaatacaaacatactactttaaacttattaacgtatgcaaatttgcatatgat 204  Q
    |||||||||||||||| |||||||| | |||||||||||||||| |||||| || || |||||| || ||||| | || |||||| || |||||    
T  17154700 ttattaaaaaattatacatttaatatagaatacacaagtttcaaaacaaacctattattttaaattttttaacatgtgtaaatttacaaatgat 17154793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 105 - 210
Target Start/End: Complemental strand, 23936483 - 23936378
Alignment:
Q  105 aattatttattaaaaaattatatatttaatagaaaatacacaagtttcaatacaaacatactactttaaacttattaacgtatgcaaatttgcatatgat 204  Q
    |||||||||||||||| |||| ||||||||| |||||  ||||||| ||| | |||  |||||  |||||||| ||||| | |||||||||||| |||||    
T  23936483 aattatttattaaaaagttatgtatttaatataaaatgtacaagttccaaaagaaagttactatgttaaacttgttaacatgtgcaaatttgcacatgat 23936384  T
Q  205 agaaaa 210  Q
    | ||||    
T  23936383 aaaaaa 23936378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 105 - 213
Target Start/End: Complemental strand, 29065531 - 29065424
Alignment:
Q  105 aattatttattaaaaaattatatatttaatagaaaatacacaagtttcaatacaaacatactactttaaacttattaacgtatgcaaatttgcatatgat 204  Q
    |||||||||||||||| ||||||||||||||  |||| ||  |||| | ||||||   ||||| ||||||||| ||||| | ||||| |||||| |||||    
T  29065531 aattatttattaaaaa-ttatatatttaatatgaaatgcattagttccgatacaatattactattttaaactttttaacatgtgcaagtttgcacatgat 29065433  T
Q  205 agaaaaacc 213  Q
    |||||||||    
T  29065432 agaaaaacc 29065424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 105 - 213
Target Start/End: Complemental strand, 29120384 - 29120277
Alignment:
Q  105 aattatttattaaaaaattatatatttaatagaaaatacacaagtttcaatacaaacatactactttaaacttattaacgtatgcaaatttgcatatgat 204  Q
    |||||||||||||||| ||||||||||||||  |||| ||  |||| | ||||||   ||||| ||||||||| ||||| | ||||| |||||| |||||    
T  29120384 aattatttattaaaaa-ttatatatttaatatgaaatgcattagttccgatacaatattactattttaaactttttaacatgtgcaagtttgcacatgat 29120286  T
Q  205 agaaaaacc 213  Q
    |||||||||    
T  29120285 agaaaaacc 29120277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 101 - 213
Target Start/End: Original strand, 33017791 - 33017903
Alignment:
Q  101 caacaattatttattaaaaaattatatatttaatagaaaatacacaagtttcaatacaaacatactactttaaacttattaacgtatgcaaatttgcata 200  Q
    |||||||||||||  ||||| |||||||||||||| |||||   |||||| | || ||||  ||||| |||||| || ||||| | |||||||||||| |    
T  33017791 caacaattatttaacaaaaagttatatatttaatacaaaatgttcaagttcctatgcaaagttactattttaaattttttaacatgtgcaaatttgcaca 33017890  T
Q  201 tgatagaaaaacc 213  Q
    | |||||||||||    
T  33017891 taatagaaaaacc 33017903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 109 - 212
Target Start/End: Complemental strand, 27819730 - 27819627
Alignment:
Q  109 atttattaaaaaattatatatttaatagaaaatacacaagtttcaatacaaacatactactttaaacttattaacgtatgcaaatttgcatatgatagaa 208  Q
    |||||||||||| ||| ||||||| || |||||  | |||||| || ||||| |||| | ||||||||| ||||| | |||||||||| | |||||||||    
T  27819730 atttattaaaaagttacatatttagtataaaatgaataagttttaagacaaaaatacaattttaaacttcttaacatgtgcaaatttgtacatgatagaa 27819631  T
Q  209 aaac 212  Q
    ||||    
T  27819630 aaac 27819627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 101 - 188
Target Start/End: Original strand, 30623393 - 30623480
Alignment:
Q  101 caacaattatttattaaaaaattatatatttaatagaaaatacacaagtttcaatacaaacatactactttaaacttattaacgtatg 188  Q
    ||||||||||||||| |||| || |||||||||||  ||||  |||||||||||||||||  | ||| ||||||||| ||||| ||||    
T  30623393 caacaattatttattcaaaagttttatatttaatatcaaatgtacaagtttcaatacaaaatttctattttaaacttcttaacatatg 30623480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 107 - 213
Target Start/End: Complemental strand, 18332793 - 18332687
Alignment:
Q  107 ttatttattaaaaaattatatatttaatagaaaatacacaagtttcaatacaaacatactactttaaacttattaacgtatgcaaatttgcatatgatag 206  Q
    ||||||||||||||  |||||||||||||  |||| || ||||| |||  ||||  ||  ||||||||||| ||||| | || ||||||||| |||||||    
T  18332793 ttatttattaaaaagctatatatttaatatgaaatgcataagttccaagtcaaaattatcactttaaacttcttaacatgtgaaaatttgcacatgatag 18332694  T
Q  207 aaaaacc 213  Q
    |||||||    
T  18332693 aaaaacc 18332687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 101 - 211
Target Start/End: Complemental strand, 31069692 - 31069583
Alignment:
Q  101 caacaattatttattaaaaaattatatatttaatagaaaatacacaagtttcaatacaaacatactactttaaacttattaacgtatgcaaatttgcata 200  Q
    ||||||||||| ||||||   ||| |||||||||| |||| ||||||||| |||  ||||  ||||| ||||||||| ||||| | || ||||||||| |    
T  31069692 caacaattattgattaaatg-ttacatatttaatataaaaaacacaagttccaagtcaaagttactaatttaaacttcttaacatgtgtaaatttgcaca 31069594  T
Q  201 tgatagaaaaa 211  Q
    |||||||||||    
T  31069593 tgatagaaaaa 31069583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 101 - 177
Target Start/End: Original strand, 16540671 - 16540747
Alignment:
Q  101 caacaattatttattaaaaaattatatatttaatagaaaatacacaagtttcaatacaaacatactactttaaactt 177  Q
    |||||||||| | |||||| ||||||||||||||| |||||| |||| ||| |||| |||| ||| | |||||||||    
T  16540671 caacaattatgtcttaaaatattatatatttaatataaaatatacaaattttaatataaacttacgattttaaactt 16540747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 127 - 211
Target Start/End: Complemental strand, 31791001 - 31790917
Alignment:
Q  127 tatttaatagaaaatacacaagtttcaatacaaacatactactttaaacttattaacgtatgcaaatttgcatatgatagaaaaa 211  Q
    ||||||||| | |||||| ||||||||| |||||| | | | |||||| || ||||  | |||||||||||||||||||||||||    
T  31791001 tatttaatatagaatacataagtttcaagacaaacttgccattttaaatttcttaatatgtgcaaatttgcatatgatagaaaaa 31790917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 123 - 211
Target Start/End: Complemental strand, 34733790 - 34733702
Alignment:
Q  123 tatatatttaatagaaaatacacaagtttcaatacaaacatactactttaaacttattaacgtatgcaaatttgcatatgatagaaaaa 211  Q
    ||||||||||||  |||||||||||||| ||||| |||| ||||||||||   |  ||||| | |||||||||||| ||| ||||||||    
T  34733790 tatatatttaatgtaaaatacacaagttccaatataaacttactactttagtatccttaacatgtgcaaatttgcacatgttagaaaaa 34733702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 105 - 212
Target Start/End: Complemental strand, 29074544 - 29074438
Alignment:
Q  105 aattatttattaaaaaattatatatttaatagaaaatacacaagtttcaatacaaacatactactttaaacttattaacgtatgcaaatttgcatatgat 204  Q
    |||||||||||||||| ||||||||||||||  |||| ||  |||| | ||||||   ||| | ||||||||| ||||| | ||||| |||||| |||||    
T  29074544 aattatttattaaaaa-ttatatatttaatatgaaatgcattagttccgatacaatattacaattttaaactttttaacatgtgcaagtttgcacatgat 29074446  T
Q  205 agaaaaac 212  Q
    ||||||||    
T  29074445 agaaaaac 29074438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 105 - 212
Target Start/End: Complemental strand, 29079308 - 29079202
Alignment:
Q  105 aattatttattaaaaaattatatatttaatagaaaatacacaagtttcaatacaaacatactactttaaacttattaacgtatgcaaatttgcatatgat 204  Q
    |||||||||||||||| ||||||||||||||  |||| ||  |||| | ||||||   ||| | ||||||||| ||||| | ||||| |||||| |||||    
T  29079308 aattatttattaaaaa-ttatatatttaatatgaaatgcattagttccgatacaatattacaattttaaactttttaacatgtgcaagtttgcacatgat 29079210  T
Q  205 agaaaaac 212  Q
    ||||||||    
T  29079209 agaaaaac 29079202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 105 - 212
Target Start/End: Complemental strand, 29107117 - 29107011
Alignment:
Q  105 aattatttattaaaaaattatatatttaatagaaaatacacaagtttcaatacaaacatactactttaaacttattaacgtatgcaaatttgcatatgat 204  Q
    |||||||||||||||| ||||||||||||||  |||| ||  |||| | ||||||   ||| | ||||||||| ||||| | ||||| |||||| |||||    
T  29107117 aattatttattaaaaa-ttatatatttaatatgaaatgcattagttccgatacaatattacaattttaaactttttaacatgtgcaagtttgcacatgat 29107019  T
Q  205 agaaaaac 212  Q
    ||||||||    
T  29107018 agaaaaac 29107011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 163 - 213
Target Start/End: Original strand, 3853072 - 3853122
Alignment:
Q  163 tactactttaaacttattaacgtatgcaaatttgcatatgatagaaaaacc 213  Q
    |||||||||||| || ||||| | |||||||||||| ||||||||||||||    
T  3853072 tactactttaaatttcttaacatgtgcaaatttgcacatgatagaaaaacc 3853122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 101 - 210
Target Start/End: Original strand, 17141342 - 17141451
Alignment:
Q  101 caacaattatttattaaaaaattatatatttaatagaaaatacacaagtttcaatacaaacatactactttaaacttattaacgtatgcaaatttgcata 200  Q
    ||||||| ||||||||||||  || |||||||||| |||||   ||||||  || |||||  |||||  |||||| | ||||| |||||||||||||| |    
T  17141342 caacaataatttattaaaaagctacatatttaatataaaatgagcaagttctaagacaaaattactatcttaaacatcttaacatatgcaaatttgcaca 17141441  T
Q  201 tgatagaaaa 210  Q
    ||||| ||||    
T  17141442 tgataaaaaa 17141451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 114 - 175
Target Start/End: Complemental strand, 31029523 - 31029462
Alignment:
Q  114 ttaaaaaattatatatttaatagaaaatacacaagtttcaatacaaacatactactttaaac 175  Q
    |||||||||||||||||||||| ||||| ||| ||||  ||||||||  ||||| |||||||    
T  31029523 ttaaaaaattatatatttaatataaaattcactagttctaatacaaagttactattttaaac 31029462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 101 - 141
Target Start/End: Complemental strand, 18247814 - 18247774
Alignment:
Q  101 caacaattatttattaaaaaattatatatttaatagaaaat 141  Q
    |||||||||||||||| |||||||| ||||||||| |||||    
T  18247814 caacaattatttattataaaattatgtatttaatataaaat 18247774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0061 (Bit Score: 49; Significance: 4e-19; HSPs: 1)
Name: scaffold0061
Description:

Target: scaffold0061; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 101 - 213
Target Start/End: Complemental strand, 52889 - 52778
Alignment:
Q  101 caacaattatttattaaaaaattatatatttaatagaaaatacacaagtttcaatacaaacatactactttaaacttattaacgtatgcaaatttgcata 200  Q
    ||||||||||| |||||||  ||| |||||||||| |||| ||||||||| |||  ||||  ||||||||||||||| ||||| | |||||||||||| |    
T  52889 caacaattattgattaaaag-ttacatatttaatacaaaaaacacaagttccaagtcaaagttactactttaaacttcttaacatgtgcaaatttgcaca 52791  T
Q  201 tgatagaaaaacc 213  Q
    |||||||||||||    
T  52790 tgatagaaaaacc 52778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 49; Significance: 4e-19; HSPs: 1)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 101 - 213
Target Start/End: Original strand, 145745 - 145856
Alignment:
Q  101 caacaattatttattaaaaaattatatatttaatagaaaatacacaagtttcaatacaaacatactactttaaacttattaacgtatgcaaatttgcata 200  Q
    ||||||||||| |||||||  ||| |||||||||| |||| ||||||||| |||  ||||  ||||||||||||||| ||||| | |||||||||||| |    
T  145745 caacaattattgattaaaag-ttacatatttaatacaaaaaacacaagttccaagtcaaagttactactttaaacttcttaacatgtgcaaatttgcaca 145843  T
Q  201 tgatagaaaaacc 213  Q
    |||||||||||||    
T  145844 tgatagaaaaacc 145856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0618 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold0618
Description:

Target: scaffold0618; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 101 - 210
Target Start/End: Complemental strand, 8525 - 8416
Alignment:
Q  101 caacaattatttattaaaaaattatatatttaatagaaaatacacaagtttcaatacaaacatactactttaaacttattaacgtatgcaaatttgcata 200  Q
    ||||||||||||||||||||| || | |||||||| ||||| ||||||||  ||  ||||  |||||||||||| || ||||| ||||||||||| || |    
T  8525 caacaattatttattaaaaaactacaaatttaatataaaatgcacaagttctaaatcaaagttactactttaaatttcttaacatatgcaaatttacaca 8426  T
Q  201 tgatagaaaa 210  Q
    ||||||||||    
T  8425 tgatagaaaa 8416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 105 - 212
Target Start/End: Complemental strand, 94125 - 94018
Alignment:
Q  105 aattatttattaaaaaattatatatttaatagaaaatacacaagtttcaatacaaacatactactttaaacttattaacgtatgcaaatttgcatatgat 204  Q
    ||||||||||||||||| ||||||||||||| |||||  | ||||| ||||  |||  || || || |||||| ||||| |||||||||||||| |||||    
T  94125 aattatttattaaaaaactatatatttaatacaaaatgtataagttccaatgtaaagttagtatttaaaacttcttaacatatgcaaatttgcacatgat 94026  T
Q  205 agaaaaac 212  Q
    ||||||||    
T  94025 agaaaaac 94018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 102 - 213
Target Start/End: Original strand, 182112 - 182221
Alignment:
Q  102 aacaattatttattaaaaaattatatatttaatagaaaatacacaagtttcaatacaaacatactactttaaacttattaacgtatgcaaatttgcatat 201  Q
    ||||||||||||||||||  ||| |||||||||| |||| |||||||||||||  ||| | ||||||||||||||| ||||| | | ||||||| || ||    
T  182112 aacaattatttattaaaag-ttacatatttaatataaaaaacacaagtttcaaatcaa-cgtactactttaaacttcttaacatgtacaaatttacacat 182209  T
Q  202 gatagaaaaacc 213  Q
    ||||||||||||    
T  182210 gatagaaaaacc 182221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0111 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 2)
Name: scaffold0111
Description:

Target: scaffold0111; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 107 - 213
Target Start/End: Complemental strand, 37219 - 37113
Alignment:
Q  107 ttatttattaaaaaattatatatttaatagaaaatacacaagtttcaatacaaacatactactttaaacttattaacgtatgcaaatttgcatatgatag 206  Q
    ||||||||||||||  || ||||||||||  |||| |||||||| |||  ||||  ||  ||||||||||| ||||| | |||||||||||| |||||||    
T  37219 ttatttattaaaaagctacatatttaatatgaaatgcacaagttccaagtcaaagttatcactttaaacttcttaacatgtgcaaatttgcacatgatag 37120  T
Q  207 aaaaacc 213  Q
    |||||||    
T  37119 aaaaacc 37113  T

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Target: scaffold0111; HSP #2
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 137 - 212
Target Start/End: Original strand, 41085 - 41160
Alignment:
Q  137 aaaatacacaagtttcaatacaaacatactactttaaacttattaacgtatgcaaatttgcatatgatagaaaaac 212  Q
    ||||| || |||||||||||||||  || || ||||||||| ||||| ||| ||||||| || |||||||||||||    
T  41085 aaaatgcataagtttcaatacaaaattattattttaaacttcttaacatatacaaatttacacatgatagaaaaac 41160  T

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Target: scaffold0192 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0192
Description:

Target: scaffold0192; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 139 - 211
Target Start/End: Complemental strand, 13636 - 13564
Alignment:
Q  139 aatacacaagtttcaatacaaacatactactttaaacttattaacgtatgcaaatttgcatatgatagaaaaa 211  Q
    ||||||||||||||||| ||||| ||||| ||||||||| ||||| | |||||||||||| ||  ||||||||    
T  13636 aatacacaagtttcaatgcaaacttactaatttaaacttcttaacatgtgcaaatttgcacatattagaaaaa 13564  T

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Target: scaffold0727 (Bit Score: 35; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0727
Description:

Target: scaffold0727; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 101 - 211
Target Start/End: Original strand, 5759 - 5868
Alignment:
Q  101 caacaattatttattaaaaaattatatatttaatagaaaatacacaagtttcaatacaaacatactactttaaacttattaacgtatgcaaatttgcata 200  Q
    ||||||||||| |||||||| | | |||||||||| |||| | |||| ||| ||   |||  ||||||||||||||| ||||| | |||||||||||| |    
T  5759 caacaattattgattaaaaact-acatatttaatataaaaaatacaaattttaagttaaagttactactttaaactttttaacatgtgcaaatttgcaca 5857  T
Q  201 tgatagaaaaa 211  Q
    |||||||||||    
T  5858 tgatagaaaaa 5868  T

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Target: scaffold0128 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0128
Description:

Target: scaffold0128; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 120 - 213
Target Start/End: Complemental strand, 44386 - 44293
Alignment:
Q  120 aattatatatttaatagaaaatacacaagtttcaatacaaacatactactttaaacttattaacgtatgcaaatttgcatatgatagaaaaacc 213  Q
    |||||| |||| |||| |||||| |||||||||||| ||||  |  || ||||||||| ||||  | |||||||||||| ||||||||||||||    
T  44386 aattatttattaaataaaaaatatacaagtttcaatgcaaagttgttattttaaactttttaatatgtgcaaatttgcacatgatagaaaaacc 44293  T

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Target: scaffold0155 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0155
Description:

Target: scaffold0155; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 101 - 213
Target Start/End: Complemental strand, 3523 - 3412
Alignment:
Q  101 caacaattatttattaaaaaattatatatttaatagaaaatacacaagtttcaatacaaacatactactttaaacttattaacgtatgcaaatttgcata 200  Q
    ||||||||||| |||||||  ||| |||||||||| |||| ||| ||||| ||||  |||   |||||||||||||| ||||  | ||||||||| || |    
T  3523 caacaattattgattaaaag-ttacatatttaatataaaaaacataagttccaatttaaagtaactactttaaacttcttaatatgtgcaaatttacaca 3425  T
Q  201 tgatagaaaaacc 213  Q
    |||||||||||||    
T  3424 tgatagaaaaacc 3412  T

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Target: scaffold0011 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 126 - 213
Target Start/End: Original strand, 13177 - 13264
Alignment:
Q  126 atatttaatagaaaatacacaagtttcaatacaaacatactactttaaacttattaacgtatgcaaatttgcatatgatagaaaaacc 213  Q
    |||||||||| |||| |||||| || |||   |||  ||||| ||||||||| ||||| | |||||||||||| ||||||||||||||    
T  13177 atatttaatataaaaaacacaaattccaaattaaagttactattttaaacttcttaacatgtgcaaatttgcacatgatagaaaaacc 13264  T

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Target: scaffold0074 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0074
Description:

Target: scaffold0074; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 127 - 212
Target Start/End: Complemental strand, 45582 - 45497
Alignment:
Q  127 tatttaatagaaaatacacaagtttcaatacaaacatactactttaaacttattaacgtatgcaaatttgcatatgatagaaaaac 212  Q
    |||||||||  |||| |||||||| | ||||||   ||||| ||||||||| || || |||| ||||||||| |||||||||||||    
T  45582 tatttaatatgaaatgcacaagttccgatacaatattactattttaaacttctttacatatgtaaatttgcacatgatagaaaaac 45497  T

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Target: scaffold0009 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 106 - 147
Target Start/End: Complemental strand, 191419 - 191379
Alignment:
Q  106 attatttattaaaaaattatatatttaatagaaaatacacaa 147  Q
    ||||||||||||||| |||||||||||||| |||||||||||    
T  191419 attatttattaaaaa-ttatatatttaatataaaatacacaa 191379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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