View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15970_low_6 (Length: 468)
Name: NF15970_low_6
Description: NF15970
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15970_low_6 |
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Alignment Details
Target: chr4 (Bit Score: 449; Significance: 0; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 449; E-Value: 0
Query Start/End: Original strand, 1 - 453
Target Start/End: Original strand, 44752615 - 44753067
Alignment:
| Q |
1 |
caacggttaaagatgtgcttgaacaaaataatgactgaataccgagcactggaaatgcaatttaacaatatggttaagcaagaaacaaaaaagaacaatg |
100 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
44752615 |
caacggttaaagatgtgcttgaacaaaataatgactgaataccgagcactggaaatgcaatttaacaatatggttaagcaagaaacaaaaaagaacaatg |
44752714 |
T |
|
| Q |
101 |
ataataaccatgaagaaatgaatgcagaatcagatcttgtttctctcagtcttggaagagttcctagtaacaatattccaaaaaatgatcaagagaaagt |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
44752715 |
ataataaccatgaagaaatgaatgcagaatcagatcttgtttctctcagtcttggaagagttcctagtaacaatattccaaaaaatgatcaagagaaagt |
44752814 |
T |
|
| Q |
201 |
taacaaagtgtctaaactagcattgaataatgatgaagaattcaataaggaagagttgtcacttggattggaatgtaaatttgaaacatcaaaatcaggt |
300 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
44752815 |
taacaaagtgtctaaactagcattgaataatgatgaagaattcaataaggaagagttgtcacttggattggaatgtaaatttgaaacatcaaaatcaggt |
44752914 |
T |
|
| Q |
301 |
agcacaactgaagggttaccaaatattccaagtccagtgaatagttctgaagttgttccaataaagaatgatgaagttgtggagacttggccaccaagta |
400 |
Q |
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|||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
44752915 |
agcacaactgaagggttacccaatattccaagtccagtgaatagttctgaagttgttccaataaagaatgatgaagttgtggagacttggccaccaagta |
44753014 |
T |
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| Q |
401 |
agacactcaataagacaatgagagatgctgaggatgaagttgctcaacaaact |
453 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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|
| T |
44753015 |
agacactcaataagacaatgagagatgctgaggatgaagttgctcaacaaact |
44753067 |
T |
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