View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15970_low_9 (Length: 378)
Name: NF15970_low_9
Description: NF15970
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15970_low_9 |
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Alignment Details
Target: chr3 (Bit Score: 350; Significance: 0; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 350; E-Value: 0
Query Start/End: Original strand, 1 - 358
Target Start/End: Original strand, 42361388 - 42361745
Alignment:
| Q |
1 |
ctgcgtcctagaatacaatttctcaaggaatgtgggttagacgctgacgaaatcttcaagttgttgaccaaagcagcgttgtttttgagcatttcgttcc |
100 |
Q |
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| T |
42361388 |
ctgcgtcctagaatacaatttctcaaggaatgtgggttagacgctgacgaaatcttcaagttattgaccaaagcagcgttgtttttgagcatttcgttcc |
42361487 |
T |
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| Q |
101 |
gttcgaaccttgcgtataagctcggggttttggtcaagattgggtataaatataggacgaaggagttagcagtggcgattgcagcttctactagaataag |
200 |
Q |
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| T |
42361488 |
gttcgaaccttgcgtataagcttggggttttggtcaagattgggtataaatataggacgaaggagttagcagtggcgattgcagcttctactagaataag |
42361587 |
T |
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| Q |
201 |
ctgtgagaatatgcagaagatggttagcctattcttgaattatgggttttcattagaagacatttttgctatgagcaagaagcatcctcagatactgcag |
300 |
Q |
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| T |
42361588 |
ctgtgagaatatgcagaagatggttagcctattcttgaattatgggttttcattagaagacatttttgctatgagcaagaagcatcctcagatactgcag |
42361687 |
T |
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| Q |
301 |
tatcatcatgcctctctagagaagaagatggattacatgatagaggagatgaatcgtg |
358 |
Q |
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| T |
42361688 |
tatcatcatgcctctctagagaagaagatggattacatgatagaggagatgaatcgtg |
42361745 |
T |
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