View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF15972_low_4 (Length: 263)

Name: NF15972_low_4
Description: NF15972
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF15972_low_4
NF15972_low_4
[»] chr7 (46 HSPs)
chr7 (1-256)||(22073166-22073419)
chr7 (1-229)||(16219358-16219587)
chr7 (1-180)||(16056578-16056757)
chr7 (49-256)||(12255409-12255614)
chr7 (1-229)||(47832058-47832287)
chr7 (1-220)||(9389346-9389567)
chr7 (1-229)||(16324256-16324485)
chr7 (49-233)||(2279756-2279941)
chr7 (1-209)||(44014423-44014633)
chr7 (1-202)||(67995-68198)
chr7 (1-210)||(810790-811001)
chr7 (63-211)||(21064822-21064971)
chr7 (1-210)||(18005897-18006101)
chr7 (53-210)||(12756378-12756535)
chr7 (65-217)||(15143691-15143844)
chr7 (50-180)||(44116804-44116933)
chr7 (49-210)||(17061621-17061783)
chr7 (59-210)||(38227788-38227940)
chr7 (116-233)||(2529615-2529733)
chr7 (1-104)||(12901579-12901682)
chr7 (140-217)||(28504955-28505033)
chr7 (114-207)||(14045187-14045281)
chr7 (114-207)||(14355217-14355311)
chr7 (58-210)||(9509495-9509649)
chr7 (136-217)||(16385912-16385994)
chr7 (136-217)||(40443762-40443844)
chr7 (137-217)||(15754541-15754622)
chr7 (114-197)||(12901768-12901852)
chr7 (114-207)||(14036637-14036731)
chr7 (114-207)||(14346667-14346761)
chr7 (115-207)||(1867650-1867743)
chr7 (136-217)||(27847498-27847580)
chr7 (137-209)||(3564026-3564099)
chr7 (1-42)||(15754718-15754759)
chr7 (58-107)||(26212302-26212351)
chr7 (1-105)||(11995796-11995900)
chr7 (1-105)||(15116731-15116835)
chr7 (66-158)||(35366540-35366631)
chr7 (66-105)||(9177431-9177470)
chr7 (137-210)||(12699218-12699292)
chr7 (56-106)||(15008263-15008313)
chr7 (1-103)||(15113194-15113296)
chr7 (117-197)||(15008118-15008199)
chr7 (58-107)||(40443695-40443744)
chr7 (162-217)||(11995712-11995768)
chr7 (117-222)||(17017040-17017146)
[»] scaffold0034 (2 HSPs)
scaffold0034 (1-256)||(32786-33039)
scaffold0034 (137-210)||(51545-51619)
[»] scaffold0556 (2 HSPs)
scaffold0556 (1-256)||(8266-8519)
scaffold0556 (1-210)||(7060-7271)
[»] chr6 (40 HSPs)
chr6 (1-256)||(23019657-23019910)
chr6 (1-229)||(27332926-27333155)
chr6 (1-229)||(27393666-27393895)
chr6 (1-229)||(25644573-25644801)
chr6 (1-210)||(4667874-4668084)
chr6 (66-217)||(22080391-22080543)
chr6 (69-220)||(25956272-25956424)
chr6 (1-202)||(19652444-19652647)
chr6 (1-210)||(4674721-4674931)
chr6 (1-210)||(4185484-4185694)
chr6 (1-210)||(4189206-4189416)
chr6 (1-210)||(29808544-29808755)
chr6 (50-210)||(18457014-18457174)
chr6 (1-210)||(28496134-28496344)
chr6 (1-106)||(19668623-19668728)
chr6 (115-233)||(9098087-9098206)
chr6 (3-107)||(31155163-31155267)
chr6 (136-210)||(20360632-20360707)
chr6 (58-210)||(29060847-29061000)
chr6 (58-210)||(19303202-19303355)
chr6 (136-217)||(20637948-20638030)
chr6 (137-217)||(1561689-1561770)
chr6 (114-233)||(20109578-20109698)
chr6 (58-177)||(25629050-25629169)
chr6 (136-217)||(18821484-18821566)
chr6 (137-210)||(22779888-22779962)
chr6 (1-42)||(1561552-1561593)
chr6 (136-217)||(16920298-16920380)
chr6 (66-104)||(17106048-17106086)
chr6 (137-210)||(18409488-18409562)
chr6 (58-107)||(11185808-11185857)
chr6 (58-107)||(16920399-16920448)
chr6 (71-104)||(18177438-18177471)
chr6 (71-104)||(18204400-18204433)
chr6 (66-107)||(18821585-18821626)
chr6 (58-107)||(20360726-20360775)
chr6 (1-34)||(22080576-22080609)
chr6 (66-178)||(16830111-16830223)
chr6 (116-180)||(19023814-19023878)
chr6 (115-220)||(19668812-19668918)
[»] scaffold0078 (1 HSPs)
scaffold0078 (1-233)||(10778-11011)
[»] chr5 (29 HSPs)
chr5 (1-256)||(26011652-26011905)
chr5 (1-229)||(21329137-21329367)
chr5 (49-256)||(22144348-22144553)
chr5 (15-233)||(5888813-5889033)
chr5 (1-233)||(21741181-21741415)
chr5 (1-210)||(22959194-22959405)
chr5 (1-210)||(21565793-21566004)
chr5 (1-109)||(21501917-21502024)
chr5 (1-210)||(19669148-19669360)
chr5 (104-229)||(21498659-21498785)
chr5 (1-217)||(21871225-21871442)
chr5 (1-217)||(21875505-21875722)
chr5 (49-210)||(11580906-11581068)
chr5 (49-217)||(1096765-1096934)
chr5 (58-210)||(21985808-21985961)
chr5 (49-220)||(36154479-36154651)
chr5 (60-210)||(23390157-23390309)
chr5 (116-233)||(20026501-20026619)
chr5 (114-222)||(22177792-22177901)
chr5 (136-217)||(21292635-21292717)
chr5 (58-210)||(24529527-24529681)
chr5 (137-217)||(19660491-19660572)
chr5 (137-200)||(9078338-9078402)
chr5 (66-104)||(25744036-25744074)
chr5 (58-107)||(9078259-9078308)
chr5 (58-107)||(21292736-21292785)
chr5 (58-107)||(22075325-22075374)
chr5 (137-217)||(22119847-22119928)
chr5 (57-105)||(20469654-20469702)
[»] scaffold0333 (2 HSPs)
scaffold0333 (1-229)||(6862-7092)
scaffold0333 (1-229)||(14242-14472)
[»] scaffold0507 (1 HSPs)
scaffold0507 (1-233)||(7695-7928)
[»] chr4 (39 HSPs)
chr4 (1-229)||(39705930-39706159)
chr4 (1-220)||(15190566-15190787)
chr4 (1-233)||(15099599-15099833)
chr4 (49-256)||(52242811-52243016)
chr4 (49-233)||(15464567-15464752)
chr4 (80-233)||(43198226-43198380)
chr4 (66-220)||(13844854-13845009)
chr4 (1-209)||(8846623-8846834)
chr4 (49-202)||(44928592-44928746)
chr4 (1-210)||(12774248-12774458)
chr4 (116-233)||(15868273-15868391)
chr4 (50-210)||(21814964-21815124)
chr4 (50-210)||(21815293-21815453)
chr4 (50-210)||(21818386-21818546)
chr4 (116-228)||(32851816-32851929)
chr4 (114-229)||(13415-13532)
chr4 (137-211)||(16597031-16597106)
chr4 (136-211)||(3097017-3097093)
chr4 (58-180)||(15091203-15091326)
chr4 (114-180)||(12287825-12287891)
chr4 (58-210)||(14038955-14039109)
chr4 (49-107)||(44102508-44102566)
chr4 (115-180)||(53081789-53081854)
chr4 (65-105)||(13616-13656)
chr4 (136-199)||(12903131-12903195)
chr4 (136-217)||(14052967-14053049)
chr4 (1-45)||(43198381-43198425)
chr4 (1-45)||(53081976-53082020)
chr4 (60-107)||(7089185-7089232)
chr4 (137-210)||(16239653-16239728)
chr4 (60-107)||(17047838-17047885)
chr4 (137-210)||(6190819-6190893)
chr4 (136-197)||(7089251-7089313)
chr4 (1-55)||(46640272-46640326)
chr4 (58-107)||(3096949-3096998)
chr4 (58-107)||(7799003-7799052)
chr4 (58-107)||(12903063-12903112)
chr4 (137-217)||(15552199-15552280)
chr4 (137-217)||(24029127-24029208)
[»] scaffold0138 (2 HSPs)
scaffold0138 (1-217)||(13190-13407)
scaffold0138 (3-106)||(18002-18105)
[»] scaffold0020 (1 HSPs)
scaffold0020 (1-220)||(15481-15702)
[»] scaffold0010 (3 HSPs)
scaffold0010 (1-202)||(130156-130359)
scaffold0010 (49-106)||(60479-60536)
scaffold0010 (114-197)||(60312-60396)
[»] chr3 (50 HSPs)
chr3 (53-233)||(2050839-2051018)
chr3 (1-221)||(324485-324706)
chr3 (49-256)||(52523345-52523550)
chr3 (6-217)||(15471179-15471391)
chr3 (1-229)||(14234740-14234969)
chr3 (1-233)||(1465047-1465281)
chr3 (1-210)||(12933971-12934182)
chr3 (1-202)||(16097579-16097782)
chr3 (49-210)||(17247947-17248109)
chr3 (1-210)||(32307918-32308128)
chr3 (50-233)||(42386710-42386894)
chr3 (50-210)||(53070360-53070520)
chr3 (1-106)||(37250932-37251037)
chr3 (1-107)||(12171869-12171976)
chr3 (1-200)||(49667754-49667955)
chr3 (114-221)||(605941-606049)
chr3 (1-202)||(1644352-1644554)
chr3 (58-200)||(40213392-40213535)
chr3 (1-210)||(9513158-9513370)
chr3 (1-210)||(9521133-9521345)
chr3 (36-199)||(14572873-14573037)
chr3 (116-222)||(23275106-23275213)
chr3 (116-230)||(23412814-23412929)
chr3 (58-210)||(25476046-25476199)
chr3 (114-222)||(43927543-43927652)
chr3 (138-210)||(49389305-49389378)
chr3 (1-103)||(13210096-13210199)
chr3 (116-228)||(14501564-14501677)
chr3 (66-210)||(11424424-11424569)
chr3 (137-217)||(14179708-14179789)
chr3 (114-211)||(12378359-12378457)
chr3 (116-228)||(45797608-45797721)
chr3 (137-210)||(18438920-18438994)
chr3 (136-217)||(20698101-20698183)
chr3 (58-210)||(26687193-26687347)
chr3 (58-210)||(14973161-14973314)
chr3 (115-180)||(37250804-37250869)
chr3 (5-42)||(49389459-49389496)
chr3 (139-210)||(16104168-16104240)
chr3 (137-199)||(14576505-14576568)
chr3 (137-199)||(17488243-17488306)
chr3 (137-199)||(17499725-17499788)
chr3 (114-220)||(22109926-22110033)
chr3 (66-104)||(606135-606173)
chr3 (137-217)||(12340138-12340219)
chr3 (1-42)||(16104030-16104071)
chr3 (58-107)||(20698202-20698251)
chr3 (1-106)||(22110116-22110221)
chr3 (137-200)||(13442660-13442724)
chr3 (58-102)||(23083132-23083176)
[»] chr8 (40 HSPs)
chr8 (4-229)||(38854893-38855119)
chr8 (1-229)||(6520618-6520847)
chr8 (1-142)||(21285848-21285989)
chr8 (27-233)||(39834107-39834315)
chr8 (1-202)||(21673954-21674157)
chr8 (1-202)||(23760509-23760711)
chr8 (65-197)||(19801101-19801234)
chr8 (1-202)||(26355367-26355570)
chr8 (49-210)||(41598482-41598644)
chr8 (116-223)||(13507657-13507765)
chr8 (116-223)||(13597189-13597297)
chr8 (115-233)||(20499024-20499143)
chr8 (58-180)||(22875372-22875494)
chr8 (58-217)||(20536514-20536675)
chr8 (141-220)||(21491382-21491462)
chr8 (36-210)||(23406665-23406841)
chr8 (140-217)||(5865931-5866009)
chr8 (58-210)||(6759563-6759717)
chr8 (140-217)||(17141302-17141380)
chr8 (136-211)||(45130691-45130767)
chr8 (114-222)||(17266565-17266674)
chr8 (137-210)||(18878898-18878972)
chr8 (114-222)||(982975-983084)
chr8 (114-200)||(17439100-17439187)
chr8 (185-256)||(21286656-21286724)
chr8 (137-217)||(21918664-21918745)
chr8 (114-200)||(24353463-24353550)
chr8 (50-211)||(21414887-21415049)
chr8 (137-210)||(7373135-7373209)
chr8 (137-210)||(18818071-18818145)
chr8 (65-107)||(21918766-21918808)
chr8 (141-210)||(22627125-22627195)
chr8 (136-217)||(31971629-31971711)
chr8 (58-107)||(18818175-18818224)
chr8 (137-217)||(21255605-21255686)
chr8 (114-200)||(37116787-37116874)
chr8 (1-57)||(21255470-21255526)
chr8 (1-45)||(22364913-22364957)
chr8 (136-180)||(25362843-25362887)
chr8 (66-106)||(37116664-37116704)
[»] scaffold0116 (2 HSPs)
scaffold0116 (66-217)||(43438-43590)
scaffold0116 (66-217)||(47358-47510)
[»] chr1 (42 HSPs)
chr1 (1-217)||(22921521-22921739)
chr1 (1-210)||(52927642-52927852)
chr1 (1-210)||(33681258-33681469)
chr1 (1-233)||(35981325-35981558)
chr1 (15-233)||(28194086-28194306)
chr1 (1-180)||(20637099-20637279)
chr1 (6-207)||(20248531-20248734)
chr1 (1-210)||(22237879-22238089)
chr1 (103-220)||(43697712-43697830)
chr1 (1-210)||(21754286-21754495)
chr1 (1-100)||(49261590-49261690)
chr1 (56-210)||(433312-433467)
chr1 (58-199)||(50209885-50210027)
chr1 (116-233)||(21861132-21861250)
chr1 (49-106)||(26065238-26065295)
chr1 (1-105)||(21861335-21861439)
chr1 (58-209)||(34510087-34510239)
chr1 (116-233)||(21895870-21895989)
chr1 (116-233)||(16759091-16759209)
chr1 (136-217)||(22355839-22355921)
chr1 (136-217)||(22357525-22357607)
chr1 (116-233)||(21342513-21342631)
chr1 (116-233)||(21347378-21347496)
chr1 (59-210)||(22532577-22532729)
chr1 (114-197)||(26065357-26065441)
chr1 (136-217)||(27250394-27250476)
chr1 (53-99)||(35260852-35260898)
chr1 (114-180)||(50687031-50687097)
chr1 (114-200)||(16367881-16367968)
chr1 (140-200)||(20918990-20919051)
chr1 (1-105)||(12271798-12271902)
chr1 (49-105)||(16758949-16759005)
chr1 (114-197)||(35260729-35260813)
chr1 (136-210)||(20846891-20846966)
chr1 (114-220)||(41049619-41049726)
chr1 (136-217)||(38801056-38801138)
chr1 (65-107)||(38801157-38801199)
chr1 (58-107)||(22354338-22354387)
chr1 (116-180)||(16093508-16093572)
chr1 (1-45)||(16368112-16368156)
chr1 (1-45)||(21896084-21896128)
chr1 (66-178)||(24087730-24087842)
[»] chr2 (26 HSPs)
chr2 (49-233)||(23708257-23708441)
chr2 (49-217)||(25176140-25176309)
chr2 (1-106)||(23207529-23207634)
chr2 (1-200)||(28406228-28406429)
chr2 (36-220)||(23076726-23076910)
chr2 (36-210)||(23660307-23660482)
chr2 (58-210)||(298476-298629)
chr2 (1-210)||(22133878-22134087)
chr2 (140-217)||(23071617-23071695)
chr2 (114-233)||(18786446-18786566)
chr2 (58-180)||(22337422-22337544)
chr2 (114-197)||(22412733-22412817)
chr2 (137-210)||(22730894-22730968)
chr2 (141-210)||(22737841-22737911)
chr2 (136-217)||(23654064-23654146)
chr2 (53-106)||(22412900-22412953)
chr2 (114-197)||(23207717-23207801)
chr2 (136-217)||(23286235-23286317)
chr2 (137-210)||(27753961-27754035)
chr2 (58-210)||(32451590-32451744)
chr2 (136-211)||(37787-37863)
chr2 (49-106)||(20519957-20520014)
chr2 (136-180)||(20309479-20309523)
chr2 (114-197)||(20519790-20519874)
chr2 (1-45)||(23791526-23791570)
chr2 (66-102)||(31756232-31756268)
[»] scaffold0810 (1 HSPs)
scaffold0810 (15-210)||(3195-3392)
[»] scaffold1984 (1 HSPs)
scaffold1984 (1-210)||(379-590)
[»] scaffold0102 (1 HSPs)
scaffold0102 (1-210)||(19515-19726)
[»] scaffold0207 (1 HSPs)
scaffold0207 (1-202)||(2313-2515)
[»] scaffold0243 (1 HSPs)
scaffold0243 (1-233)||(5760-5993)
[»] scaffold0530 (1 HSPs)
scaffold0530 (1-233)||(666-905)
[»] scaffold0475 (1 HSPs)
scaffold0475 (1-210)||(9326-9536)
[»] scaffold0125 (1 HSPs)
scaffold0125 (1-210)||(45450-45662)
[»] scaffold0001 (1 HSPs)
scaffold0001 (1-210)||(160934-161145)
[»] scaffold0621 (2 HSPs)
scaffold0621 (1-200)||(6785-6987)
scaffold0621 (4-105)||(8723-8824)
[»] scaffold0023 (2 HSPs)
scaffold0023 (1-180)||(39864-40044)
scaffold0023 (1-210)||(101644-101854)
[»] scaffold0012 (2 HSPs)
scaffold0012 (108-200)||(227849-227942)
scaffold0012 (49-113)||(225705-225769)
[»] scaffold0555 (2 HSPs)
scaffold0555 (1-129)||(10283-10411)
scaffold0555 (151-211)||(10228-10289)
[»] scaffold0218 (2 HSPs)
scaffold0218 (1-106)||(7841-7946)
scaffold0218 (141-216)||(28935-29011)
[»] scaffold0211 (1 HSPs)
scaffold0211 (1-210)||(28470-28681)
[»] scaffold0028 (1 HSPs)
scaffold0028 (1-210)||(132902-133113)
[»] scaffold0320 (1 HSPs)
scaffold0320 (84-233)||(12329-12478)
[»] scaffold0839 (1 HSPs)
scaffold0839 (49-200)||(1748-1900)
[»] scaffold0228 (3 HSPs)
scaffold0228 (58-210)||(4814-4968)
scaffold0228 (58-210)||(12396-12550)
scaffold0228 (58-210)||(22348-22502)
[»] scaffold0150 (1 HSPs)
scaffold0150 (8-210)||(32339-32543)
[»] scaffold0503 (1 HSPs)
scaffold0503 (50-210)||(12228-12388)
[»] scaffold1137 (1 HSPs)
scaffold1137 (1-210)||(1962-2173)
[»] scaffold0628 (1 HSPs)
scaffold0628 (1-210)||(2464-2674)
[»] scaffold0165 (4 HSPs)
scaffold0165 (114-232)||(27281-27400)
scaffold0165 (64-105)||(27485-27526)
scaffold0165 (136-217)||(3855-3937)
scaffold0165 (136-217)||(7919-8001)
[»] scaffold0142 (1 HSPs)
scaffold0142 (49-210)||(17078-17240)
[»] scaffold0076 (1 HSPs)
scaffold0076 (114-222)||(24169-24279)
[»] scaffold0031 (1 HSPs)
scaffold0031 (50-210)||(20087-20247)
[»] scaffold0737 (1 HSPs)
scaffold0737 (1-106)||(1562-1667)
[»] scaffold0122 (1 HSPs)
scaffold0122 (58-210)||(25726-25879)
[»] scaffold0080 (2 HSPs)
scaffold0080 (1-106)||(19649-19754)
scaffold0080 (37-107)||(40198-40268)
[»] scaffold0040 (2 HSPs)
scaffold0040 (1-106)||(103403-103508)
scaffold0040 (114-220)||(103234-103341)
[»] scaffold0021 (6 HSPs)
scaffold0021 (1-106)||(136132-136237)
scaffold0021 (1-106)||(144840-144945)
scaffold0021 (103-210)||(62913-63021)
scaffold0021 (114-220)||(135942-136049)
scaffold0021 (114-220)||(144650-144757)
scaffold0021 (58-107)||(124891-124940)
[»] scaffold0016 (2 HSPs)
scaffold0016 (60-210)||(2159-2311)
scaffold0016 (143-222)||(119200-119280)
[»] scaffold0278 (1 HSPs)
scaffold0278 (124-210)||(5966-6053)
[»] scaffold0056 (3 HSPs)
scaffold0056 (58-210)||(16876-17029)
scaffold0056 (138-217)||(79016-79096)
scaffold0056 (50-94)||(79107-79151)
[»] scaffold0413 (2 HSPs)
scaffold0413 (65-210)||(15276-15422)
scaffold0413 (114-230)||(13007-13124)
[»] scaffold0292 (2 HSPs)
scaffold0292 (58-210)||(649-802)
scaffold0292 (59-200)||(3777-3920)
[»] scaffold0235 (2 HSPs)
scaffold0235 (116-230)||(14004-14119)
scaffold0235 (136-217)||(11178-11260)
[»] scaffold0217 (1 HSPs)
scaffold0217 (59-210)||(16260-16413)
[»] scaffold0145 (1 HSPs)
scaffold0145 (58-210)||(39067-39219)
[»] scaffold0075 (3 HSPs)
scaffold0075 (114-229)||(53113-53230)
scaffold0075 (65-105)||(53314-53354)
scaffold0075 (8-217)||(7948-8158)
[»] scaffold0357 (3 HSPs)
scaffold0357 (49-104)||(15866-15921)
scaffold0357 (114-180)||(13570-13636)
scaffold0357 (114-211)||(3133-3231)
[»] scaffold0022 (2 HSPs)
scaffold0022 (114-200)||(80701-80788)
scaffold0022 (66-106)||(128735-128775)
[»] scaffold1765 (1 HSPs)
scaffold1765 (1-59)||(1333-1391)
[»] scaffold0627 (1 HSPs)
scaffold0627 (58-202)||(211-356)
[»] scaffold0175 (2 HSPs)
scaffold0175 (140-217)||(34509-34587)
scaffold0175 (58-107)||(13398-13447)
[»] scaffold0161 (1 HSPs)
scaffold0161 (140-217)||(2099-2177)
[»] scaffold0011 (3 HSPs)
scaffold0011 (58-210)||(52218-52372)
scaffold0011 (141-217)||(167644-167721)
scaffold0011 (58-107)||(167745-167794)
[»] scaffold0876 (1 HSPs)
scaffold0876 (137-217)||(2739-2820)
[»] scaffold0395 (2 HSPs)
scaffold0395 (66-179)||(8185-8298)
scaffold0395 (139-210)||(623-695)
[»] scaffold0130 (2 HSPs)
scaffold0130 (114-230)||(1344-1461)
scaffold0130 (139-210)||(28924-28996)
[»] scaffold0120 (3 HSPs)
scaffold0120 (59-211)||(32619-32772)
scaffold0120 (59-211)||(46233-46386)
scaffold0120 (137-200)||(16473-16537)
[»] scaffold0647 (1 HSPs)
scaffold0647 (139-210)||(5782-5854)
[»] scaffold0601 (1 HSPs)
scaffold0601 (116-233)||(7095-7213)
[»] scaffold0598 (2 HSPs)
scaffold0598 (136-217)||(717-799)
scaffold0598 (58-107)||(818-867)
[»] scaffold0456 (1 HSPs)
scaffold0456 (136-211)||(10097-10173)
[»] scaffold0100 (1 HSPs)
scaffold0100 (64-210)||(20425-20572)
[»] scaffold0305 (1 HSPs)
scaffold0305 (66-210)||(20717-20863)
[»] scaffold0123 (1 HSPs)
scaffold0123 (114-200)||(25545-25632)
[»] scaffold1257 (1 HSPs)
scaffold1257 (1-58)||(2030-2088)
[»] scaffold0718 (1 HSPs)
scaffold0718 (136-217)||(4796-4878)
[»] scaffold0427 (1 HSPs)
scaffold0427 (136-217)||(13869-13951)
[»] scaffold0358 (4 HSPs)
scaffold0358 (136-217)||(310-392)
scaffold0358 (136-217)||(5086-5168)
scaffold0358 (59-107)||(243-291)
scaffold0358 (59-107)||(5019-5067)
[»] scaffold0352 (1 HSPs)
scaffold0352 (138-211)||(17668-17742)
[»] scaffold0266 (1 HSPs)
scaffold0266 (137-210)||(18619-18693)
[»] scaffold0098 (1 HSPs)
scaffold0098 (139-228)||(29149-29239)
[»] scaffold1842 (2 HSPs)
scaffold1842 (141-217)||(714-791)
scaffold1842 (58-107)||(815-864)
[»] scaffold0351 (1 HSPs)
scaffold0351 (140-220)||(16657-16738)
[»] scaffold0261 (2 HSPs)
scaffold0261 (140-210)||(16047-16118)
scaffold0261 (117-228)||(17909-18021)
[»] scaffold1419 (1 HSPs)
scaffold1419 (66-102)||(338-374)
[»] scaffold1403 (1 HSPs)
scaffold1403 (1-101)||(800-900)
[»] scaffold0221 (1 HSPs)
scaffold0221 (1-57)||(12623-12679)
[»] scaffold0121 (1 HSPs)
scaffold0121 (137-200)||(8203-8267)
[»] scaffold0114 (1 HSPs)
scaffold0114 (135-220)||(15127-15213)
[»] scaffold0540 (1 HSPs)
scaffold0540 (58-200)||(684-827)
[»] scaffold0109 (1 HSPs)
scaffold0109 (117-233)||(35508-35625)
[»] scaffold0005 (1 HSPs)
scaffold0005 (117-180)||(268094-268157)
[»] scaffold0484 (1 HSPs)
scaffold0484 (136-217)||(1288-1370)
[»] scaffold0403 (1 HSPs)
scaffold0403 (136-217)||(5222-5304)
[»] scaffold0389 (1 HSPs)
scaffold0389 (140-217)||(13262-13340)
[»] scaffold0113 (1 HSPs)
scaffold0113 (136-217)||(32438-32520)
[»] scaffold0088 (1 HSPs)
scaffold0088 (136-217)||(21275-21357)
[»] scaffold0026 (2 HSPs)
scaffold0026 (137-210)||(39592-39666)
scaffold0026 (137-200)||(40242-40306)
[»] scaffold0476 (1 HSPs)
scaffold0476 (1-42)||(13017-13058)
[»] scaffold0141 (1 HSPs)
scaffold0141 (58-107)||(39783-39832)
[»] scaffold0049 (1 HSPs)
scaffold0049 (58-107)||(74980-75029)
[»] scaffold0037 (1 HSPs)
scaffold0037 (1-77)||(22467-22544)
[»] scaffold0309 (1 HSPs)
scaffold0309 (59-107)||(6917-6965)
[»] scaffold0064 (1 HSPs)
scaffold0064 (136-217)||(47360-47442)
[»] scaffold0042 (1 HSPs)
scaffold0042 (137-200)||(23973-24037)
[»] scaffold0032 (1 HSPs)
scaffold0032 (136-199)||(51953-52017)


Alignment Details
Target: chr7 (Bit Score: 215; Significance: 1e-118; HSPs: 46)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 215; E-Value: 1e-118
Query Start/End: Original strand, 1 - 256
Target Start/End: Original strand, 22073166 - 22073419
Alignment:
Q  1 aactcacatcaactcgtgcgacaagtatcgcatttaacctaacaaagaattctgtaactgggtaactcgcgaggcgatggcctctactcgccatggcgag 100  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  22073166 aactcacatcaactcgtgcgacaaggatcgcatttaacctaacaaagcattctgtaactgggtaactcgcgaggcgagggcctctactcgccatggcgag 22073265  T
Q  101 ttcaggtgtaactcccaaaaatccattcttaaactattccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaa 199  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||    
T  22073266 ttcaggtgtaactcccaaaaatccattcttaaactattctaggttcaatctcattctagaatcttttctaatcattattacacatgttcaggcactcaaa 22073365  T
Q  200 aacctctaaggtccaacttaaggggcaaaactactacgaaaccatgtcgactctctg 256  Q
    |||||||||||||||||||||||||||||   |||||||||||||||||||||||||    
T  22073366 aacctctaaggtccaacttaaggggcaaa---actacgaaaccatgtcgactctctg 22073419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 1 - 229
Target Start/End: Complemental strand, 16219587 - 16219358
Alignment:
Q  1 aactcacatcaactcgtgcgacaagtatcgcatttaacctaacaaagaattctgtaactgggtaactcgcgaggcgatggcctctactcgccatggcgag 100  Q
    |||| ||||||||| |||||||||  ||||||||||||||||||| | ||||||||||| |  |||||||||||||| ||||||||||||||||||||||    
T  16219587 aactaacatcaacttgtgcgacaaagatcgcatttaacctaacaaggcattctgtaactagacaactcgcgaggcgagggcctctactcgccatggcgag 16219488  T
Q  101 ttcaggtgtaactcccaaaaatccattcttaaactattccaggttcaatctcattctagaatcttttctaatcattattaca-tagttcaggcactcaaa 199  Q
    |||| ||||||||||||||||| |||||||||||||||||||||||||||||| |||| ||||||| ||||||||||||| |  |||| || ||||||||    
T  16219487 ttcacgtgtaactcccaaaaattcattcttaaactattccaggttcaatctcaatctaaaatctttcctaatcattattatacaagtttagacactcaaa 16219388  T
Q  200 aacctctaaggtccaacttaaggggcaaaa 229  Q
    ||| |||||||| |||||||| || |||||    
T  16219387 aacatctaaggttcaacttaaaggtcaaaa 16219358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 1 - 180
Target Start/End: Original strand, 16056578 - 16056757
Alignment:
Q  1 aactcacatcaactcgtgcgacaagtatcgcatttaacctaacaaagaattctgtaactgggtaactcgcgaggcgatggcctctactcgccatggcgag 100  Q
    ||||||||||||||||||| ||||  ||||||||||||||||||| | |||||||||||||||||||||||||||||  |||||||||||| ||||||||    
T  16056578 aactcacatcaactcgtgctacaaagatcgcatttaacctaacaaggcattctgtaactgggtaactcgcgaggcgagagcctctactcgctatggcgag 16056677  T
Q  101 ttcaggtgtaactcccaaaaatccattcttaaactattccaggttcaatctcattctagaatcttttctaatcattatta 180  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||| ||||||| ||| |||||||||    
T  16056678 ttcaggtgtaattcccaaaaatccattcttaaactattccaggttcaatctcaatctaaaatctttcctattcattatta 16056757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 49 - 256
Target Start/End: Complemental strand, 12255614 - 12255409
Alignment:
Q  49 attctgtaactgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactcccaaaaatccattcttaaactattccaggttcaa 148  Q
    |||||||||||||| ||||||||||||||  |||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  12255614 attctgtaactgggaaactcgcgaggcgagagcctctactcgctatggcgagttcaggtgtaactcccaaaaattcattcttaaactattccaggttcaa 12255515  T
Q  149 tctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaaggtccaacttaaggggcaaaactactacgaaaccatgtc 247  Q
    ||||| |||||||||||| ||||||||||||| | | ||||| |||||||||| | |||||   |||||||||||  ||||   ||||||||| |||||     
T  12255514 tctcaatctagaatctttcctaatcattattatacatgttcaagcactcaaaatcatctaaataccaacttaaggatcaaa---actacgaaatcatgtt 12255418  T
Q  248 gactctctg 256  Q
    |||||||||    
T  12255417 gactctctg 12255409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 1 - 229
Target Start/End: Original strand, 47832058 - 47832287
Alignment:
Q  1 aactcacatcaactcgtgcgacaagtatcgcatttaacctaa-caaagaattctgtaactgggtaactcgcgaggcgatggcctctactcgccatggcga 99  Q
    ||||||||||||||||| ||||||  ||| |||||||||||| ||||| |||||||||||||| |  ||||||||||| |||||||||||||||||||||    
T  47832058 aactcacatcaactcgtccgacaaagatcacatttaacctaaacaaagcattctgtaactgggcagttcgcgaggcgagggcctctactcgccatggcga 47832157  T
Q  100 gttcaggtgtaactcccaaaaatccattcttaaactattccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaa 198  Q
    ||||| ||||||||| | ||||| | ||||||||||||||||| |||||||| | |||  ||||||| ||||||||||||| | | ||||||||||||||    
T  47832158 gttcatgtgtaactctc-aaaattcgttcttaaactattccagattcaatcttaatctccaatctttcctaatcattattagacatgttcaggcactcaa 47832256  T
Q  199 aaacctctaaggtccaacttaaggggcaaaa 229  Q
    |||| |||||||| |||||||| || |||||    
T  47832257 aaacatctaaggttcaacttaaaggtcaaaa 47832287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 1 - 220
Target Start/End: Complemental strand, 9389567 - 9389346
Alignment:
Q  1 aactcacatcaactcgtgcgacaagtatcgcatttaacctaa-caaagaattctgtaactgggtaactcgcgaggcgatggcctctactcgccatggcga 99  Q
    |||||||||||||||||| |||||  ||||| |||||||||| ||| | ||||||||||||  || ||||||||||||  ||||||||||||||||||||    
T  9389567 aactcacatcaactcgtgtgacaaagatcgcttttaacctaaacaaggcattctgtaactgcttagctcgcgaggcgagagcctctactcgccatggcga 9389468  T
Q  100 gttcaggtgtaactcccaaaaatccattcttaaactattccaggttcaatctcattctagaatcttttctaatcattattaca-tagttcaggcactcaa 198  Q
    |||||| |||||||| || |||| | |||||||||||||||||||||||||||| |||| ||||||| |||||||| |||| |  ||| ||| |||||||    
T  9389467 gttcagctgtaactcacataaattcgttcttaaactattccaggttcaatctcaatctacaatctttcctaatcatcattatacaagtccagacactcaa 9389368  T
Q  199 aaacctctaaggtccaacttaa 220  Q
    |||| || ||||| ||||||||    
T  9389367 aaacatccaaggttcaacttaa 9389346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 1 - 229
Target Start/End: Original strand, 16324256 - 16324485
Alignment:
Q  1 aactcacatcaactcgtgcgacaagtatcgcatttaacctaacaaagaattctgtaactgggtaactcgcgaggcgatggcctctactcgccatggcgag 100  Q
    ||||||||||||||| ||||||||| ||| ||||||||||||||| | |||||||||||||| |  |||| |||||| ||||||||||||||||||||||    
T  16324256 aactcacatcaactcatgcgacaaggatcacatttaacctaacaaggcattctgtaactgggcagttcgcaaggcgagggcctctactcgccatggcgag 16324355  T
Q  101 ttcaggtgtaactcccaaaaatccattcttaaactattccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaa 199  Q
    |||   | |||||| ||||||| | ||||||||||||||||||||||||||||  ||  ||||||| ||||||||||||| | | ||||| |||||||||    
T  16324356 ttccaatctaactctcaaaaattcgttcttaaactattccaggttcaatctcaaactccaatctttcctaatcattattagacatgttcaagcactcaaa 16324455  T
Q  200 aacctctaaggtccaacttaaggggcaaaa 229  Q
    ||| |  ||||| |||||||| || |||||    
T  16324456 aacattcaaggttcaacttaaaggtcaaaa 16324485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 49 - 233
Target Start/End: Complemental strand, 2279941 - 2279756
Alignment:
Q  49 attctgtaactgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactcccaaaaatccattcttaaactattccaggttcaa 148  Q
    ||||| ||||| || |||||||||||||| ||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||| |||||||||    
T  2279941 attctataactaggcaactcgcgaggcgagggcctctactcgctatggcgagttcaggtgtaacacccaaaaatccattcttaaactattacaggttcaa 2279842  T
Q  149 tctcattctagaatcttttctaatcattatta--catagttcaggcactcaaaaacctctaaggtccaacttaaggggcaaaactac 233  Q
    ||||| |||| ||||||| |||||||||||||  ||| |||||||||||||||| | |||||    ||||||||||  |||||||||    
T  2279841 tctcaatctaaaatctttcctaatcattattatgcat-gttcaggcactcaaaatcatctaaatatcaacttaaggatcaaaactac 2279756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 1 - 209
Target Start/End: Original strand, 44014423 - 44014633
Alignment:
Q  1 aactcacatcaactcgtgcgacaagtatcgcatttaacctaa-caaagaattctgtaactgggtaactcgcgaggcgatggcctctactcgccatggcga 99  Q
    |||||||||||| |||||||||||  |||||||||||||||| ||| | |||||||||| || || ||||||||||||  |||||||||| |||||||||    
T  44014423 aactcacatcaattcgtgcgacaatgatcgcatttaacctaaacaaggcattctgtaaccggttagctcgcgaggcgagagcctctactcaccatggcga 44014522  T
Q  100 gttcaggtgtaactcccaaaaatccattcttaaactattccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaa 198  Q
    ||||||||| ||||  ||||||| |||||| |||   |||||||||||||||||||||  ||||||| ||||||||||||| | | ||||||||||||||    
T  44014523 gttcaggtgcaactaacaaaaattcattctaaaatctttccaggttcaatctcattctccaatctttcctaatcattattagacatgttcaggcactcaa 44014622  T
Q  199 aaacctctaag 209  Q
    |||| ||||||    
T  44014623 aaacatctaag 44014633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 1 - 202
Target Start/End: Original strand, 67995 - 68198
Alignment:
Q  1 aactcacatcaactcgtgcgacaagtatcgcatttaacctaa-caaagaattctgtaactgggtaactcgcgaggcgatggcctctactcgccatggcga 99  Q
    |||||||||||||| |||||||||| |||||||||||||||| ||| | ||||||||||||| || ||||||||||||  ||||||||||||||||||||    
T  67995 aactcacatcaacttgtgcgacaaggatcgcatttaacctaaacaaggcattctgtaactggttagctcgcgaggcgagagcctctactcgccatggcga 68094  T
Q  100 gttcaggtgtaactcccaaaaatccattcttaaactattccaggttcaatctcattctagaatcttttctaatcattatt--acatagttcaggcactca 197  Q
    |||||  ||||||||||| || |   |||||||| ||||||||||||||||||| |||  ||||||| ||||||||||||  ||||| |||||||||||     
T  68095 gttcatctgtaactcccacaagtttgttcttaaattattccaggttcaatctcaatctccaatctttcctaatcattattagacata-ttcaggcactcg 68193  T
Q  198 aaaac 202  Q
    |||||    
T  68194 aaaac 68198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 210
Target Start/End: Complemental strand, 811001 - 810790
Alignment:
Q  1 aactcacatcaactcgtgcgacaagtatcgcatttaacctaa-caaagaattctgtaac-tgggtaactcgcgaggcgatggcctctactcgccatggcg 98  Q
    |||||||||||||| | |||||||  |||||||||||| ||| ||| | ||| |||||| |  ||| ||||||||||||  |||||||||||||||||||    
T  811001 aactcacatcaacttgcgcgacaaagatcgcatttaacttaaacaaggcattttgtaacataagta-ctcgcgaggcgagagcctctactcgccatggcg 810903  T
Q  99 agttcaggtgtaactcccaaaaatccattcttaaactattccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactca 197  Q
    |||||||||  |  || ||||||| |||||| ||    ||||||||||||||| |||||  ||||||| ||||||||||||| ||| |||||||||||||    
T  810902 agttcaggtacagttcacaaaaattcattctaaattctttccaggttcaatcttattctccaatctttcctaatcattattagatatgttcaggcactca 810803  T
Q  198 aaaacctctaagg 210  Q
    ||||| |||||||    
T  810802 aaaacatctaagg 810790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 63 - 211
Target Start/End: Complemental strand, 21064971 - 21064822
Alignment:
Q  63 taactcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactcccaaaaatccattcttaaactattccaggttcaatctcattctagaat 162  Q
    |||||| ||||||||  ||||||||||||||||||||||| ||||  ||| | |||||||||||||| | ||||||||| |||||||||||||||| |||    
T  21064971 taactcacgaggcgagagcctctactcgccatggcgagttaaggtaaaacactcaaaaatccattctgacactattccaagttcaatctcattctaaaat 21064872  T
Q  163 cttttctaatcattat--tacatagttcaggcactcaaaaacctctaaggt 211  Q
     ||| |||||||||||  ||||| |||||||| |||| |||| ||||||||    
T  21064871 atttcctaatcattattgtacat-gttcaggccctcataaacatctaaggt 21064822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 210
Target Start/End: Original strand, 18005897 - 18006101
Alignment:
Q  1 aactcacatcaactcgtgcgacaagtatcgcatttaacctaa-caaagaattctgtaactgggtaactcgcgaggcgatggcctctactcgccatggcga 99  Q
    |||||| ||||||| |||||||||  |||||||| | ||||| ||| | ||| ||||||| |  || ||||||||||| |||||||| ||||||||||||    
T  18005897 aactcatatcaacttgtgcgacaaagatcgcatt-atcctaaacaaggcattttgtaactagtcaattcgcgaggcgagggcctctagtcgccatggcga 18005995  T
Q  100 gttcaggtgtaactcccaaaaatccattcttaaactattccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaa 198  Q
    |||||||| ||||||||| || | | |||||||||||||  |||||||||||||      |||||||  |||||||||||| | | ||||||||||||||    
T  18005996 gttcaggtataactcccacaagttcgttcttaaactattttaggttcaatctca------aatctttcataatcattattagacatgttcaggcactcaa 18006089  T
Q  199 aaacctctaagg 210  Q
    |||| |||||||    
T  18006090 aaacatctaagg 18006101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 53 - 210
Target Start/End: Complemental strand, 12756535 - 12756378
Alignment:
Q  53 tgtaactgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactcccaaaaa-tccattcttaaactattccaggttcaatct 151  Q
    ||||| |||| ||||||||||||||  ||||||||||||||||| ||||||||||  | || ||||||| | |||||||||| || ||||||||||||||    
T  12756535 tgtaattgggcaactcgcgaggcgagagcctctactcgccatggtgagttcaggt-cagcttccaaaaagttcattcttaaa-taatccaggttcaatct 12756438  T
Q  152 cattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaagg 210  Q
    ||||||| | ||||| ||||||||||||| | | |||||||||||||||| | |||||||    
T  12756437 cattctacattctttcctaatcattattaaacatgttcaggcactcaaaagcatctaagg 12756378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 65 - 217
Target Start/End: Complemental strand, 15143844 - 15143691
Alignment:
Q  65 actcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactcccaaaaatccattcttaaactattccaggttcaatctcattctagaatct 164  Q
    |||||||||||||  |||||| ||||||||||||||| |||||   | || ||||| | |||||| |||   |||||||||||||||||||||| |||||    
T  15143844 actcgcgaggcgagagcctctgctcgccatggcgagtacaggtcagaatcacaaaagttcattctaaaatctttccaggttcaatctcattctaaaatct 15143745  T
Q  165 tttctaatcattattacata-gttcaggcactcaaaaacctctaaggtccaact 217  Q
    || ||||||||||||| | | |||||||||||||||  | |||||||| |||||    
T  15143744 ttcctaatcattattagacatgttcaggcactcaaaggcatctaaggtacaact 15143691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 50 - 180
Target Start/End: Original strand, 44116804 - 44116933
Alignment:
Q  50 ttctgtaactgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactcccaaaaatccattcttaaactattccaggttcaat 149  Q
    ||||||||||| || |||||||||||||  |||||| |||||||||||||||||||||   | |||||||  | |||||| || || |||| ||||||||    
T  44116804 ttctgtaactgagtcactcgcgaggcgagagcctctgctcgccatggcgagttcaggtcagattcccaaagtttcattctaaatct-ttccgggttcaat 44116902  T
Q  150 ctcattctagaatcttttctaatcattatta 180  Q
    ||||||||| | ||||| |||||||||||||    
T  44116903 ctcattctacattctttcctaatcattatta 44116933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 49 - 210
Target Start/End: Complemental strand, 17061783 - 17061621
Alignment:
Q  49 attctgtaactgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactcccaaaaatccattcttaaa-ctattccaggttca 147  Q
    ||||||||| | ||| |||||||||||||  ||||||||||||||| ||||||||||||   | || ||||  |  ||||| ||| |||| |||||||||    
T  17061783 attctgtaaataggtcactcgcgaggcgagagcctctactcgccatcgcgagttcaggtcagattctcaaagttttattctaaaatctat-ccaggttca 17061685  T
Q  148 atctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaagg 210  Q
    ||||||||||| | ||||| ||||||||||||| | | |||||||||||||||| | |||||||    
T  17061684 atctcattctacattctttcctaatcattattaaacatgttcaggcactcaaaagcatctaagg 17061621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 59 - 210
Target Start/End: Original strand, 38227788 - 38227940
Alignment:
Q  59 tgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactcccaaaaatc-cattcttaaactattccaggttcaatctcattct 157  Q
    ||||| |||||||||||||  |||||| |||||| ||||||||||||||   | ||| |||| |  |||||| || || |||||||||||||||||||||    
T  38227788 tgggtcactcgcgaggcgagagcctctgctcgccgtggcgagttcaggtcagaatccaaaaagtttcattctaaatct-ttccaggttcaatctcattct 38227886  T
Q  158 agaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaagg 210  Q
    | | ||||| ||||||||||||| | | |||||||||||||||| | |||||||    
T  38227887 acattctttcctaatcattattagacatgttcaggcactcaaaagcatctaagg 38227940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 116 - 233
Target Start/End: Complemental strand, 2529733 - 2529615
Alignment:
Q  116 caaaaatccattcttaaactattccaggttcaatctcattctagaatcttttctaatcattatta--catagttcaggcactcaaaaacctctaaggtcc 213  Q
    |||||||||||| ||||||| |  ||||| |||||||| |||| || |||  |||||||||||||  |||| ||||||||||||||| | |||||||| |    
T  2529733 caaaaatccatttttaaactttgtcaggtccaatctcaatctaaaaacttgcctaatcattattatacata-ttcaggcactcaaaatcatctaaggttc 2529635  T
Q  214 aacttaaggggcaaaactac 233  Q
    |||||||||| |||||||||    
T  2529634 aacttaagggacaaaactac 2529615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 104
Target Start/End: Original strand, 12901579 - 12901682
Alignment:
Q  1 aactcacatcaactcgtgcgacaagtatcgcatttaacctaacaaagaattctgtaactgggtaactcgcgaggcgatggcctctactcgccatggcgag 100  Q
    ||||||||||||||||| |||||| | || ||||||||||||||| |  || ||||| |||  |||||| |||||||  |||||||||||| ||||||||    
T  12901579 aactcacatcaactcgtacgacaaatgtcacatttaacctaacaaggtgttttgtaaatggacaactcgtgaggcgagagcctctactcgctatggcgag 12901678  T
Q  101 ttca 104  Q
    ||||    
T  12901679 ttca 12901682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 140 - 217
Target Start/End: Complemental strand, 28505033 - 28504955
Alignment:
Q  140 caggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaaggtccaact 217  Q
    ||||||||||||||||||| | ||||| ||||||||||||| | | |||||||||||||||||| |||||||| |||||    
T  28505033 caggttcaatctcattctacattctttcctaatcattattagacatgttcaggcactcaaaaacatctaaggttcaact 28504955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 114 - 207
Target Start/End: Original strand, 14045187 - 14045281
Alignment:
Q  114 cccaaaaatccattcttaaactattccaggttcaatctcattctagaatcttttctaatcattat--tacatagttcaggcactcaaaaacctcta 207  Q
    |||||||||||||| ||||||| | ||||||||||||||| |||| || |||  |||||||||||  |||||| ||||||||||||||||| ||||    
T  14045187 cccaaaaatccatttttaaactttcccaggttcaatctcaatctaaaaacttgcctaatcattattatacata-ttcaggcactcaaaaacatcta 14045281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 114 - 207
Target Start/End: Original strand, 14355217 - 14355311
Alignment:
Q  114 cccaaaaatccattcttaaactattccaggttcaatctcattctagaatcttttctaatcattat--tacatagttcaggcactcaaaaacctcta 207  Q
    |||||||||||||| ||||||| | ||||||||||||||| |||| || |||  |||||||||||  |||||| ||||||||||||||||| ||||    
T  14355217 cccaaaaatccatttttaaactttcccaggttcaatctcaatctaaaaacttgcctaatcattattatacata-ttcaggcactcaaaaacatcta 14355311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 58 - 210
Target Start/End: Original strand, 9509495 - 9509649
Alignment:
Q  58 ctgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactcccaaaaatc-cattcttaaactattccaggttcaatctcattc 156  Q
    |||||| |||||||||||||  |||||| |||||| ||||||||||||||   | ||||| || |  ||||||  ||   |||||||||||||||||| |    
T  9509495 ctgggtcactcgcgaggcgagagcctctcctcgccgtggcgagttcaggtcagaatcccacaagtttcattctacaatctttccaggttcaatctcatcc 9509594  T
Q  157 tagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaagg 210  Q
    || | ||||| ||||||||||||| | | |||||||||||||||| | |||||||    
T  9509595 tacattctttcctaatcattattagacatgttcaggcactcaaaagcatctaagg 9509649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 136 - 217
Target Start/End: Complemental strand, 16385994 - 16385912
Alignment:
Q  136 attccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaaggtccaact 217  Q
    ||||||||||||||||||| ||| | ||||| ||||||||||||| | | |||||||||||||||| | |||||||| |||||    
T  16385994 attccaggttcaatctcatcctacattctttcctaatcattattagacatgttcaggcactcaaaagcatctaaggttcaact 16385912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 136 - 217
Target Start/End: Original strand, 40443762 - 40443844
Alignment:
Q  136 attccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaaggtccaact 217  Q
    ||||||||||||||||||| ||| | ||||| ||||||||||||| | | |||||||||||||||| | |||||||| |||||    
T  40443762 attccaggttcaatctcatcctaaattctttcctaatcattattagacatgttcaggcactcaaaagcatctaaggttcaact 40443844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 137 - 217
Target Start/End: Complemental strand, 15754622 - 15754541
Alignment:
Q  137 ttccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaaggtccaact 217  Q
    ||||||||||||||||||||||   ||||| ||||||||||||| | | |||||||||||||||| | |||||||| |||||    
T  15754622 ttccaggttcaatctcattctactttctttcctaatcattattagacatgttcaggcactcaaaagcatctaaggttcaact 15754541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 114 - 197
Target Start/End: Original strand, 12901768 - 12901852
Alignment:
Q  114 cccaaaaatccattcttaaactattccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactca 197  Q
    |||||||||||||| ||||||| | ||||||||||||||| |||| || |||  ||||||||||||| | | |||||||||||||    
T  12901768 cccaaaaatccatttttaaactttcccaggttcaatctcaatctaaaaacttgcctaatcattattatacatgttcaggcactca 12901852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 114 - 207
Target Start/End: Original strand, 14036637 - 14036731
Alignment:
Q  114 cccaaaaatccattcttaaactattccaggttcaatctcattctagaatcttttctaatcatta--ttacatagttcaggcactcaaaaacctcta 207  Q
    |||||||||||||| ||||||| | | ||||||||||||| |||| || |||  ||||||||||  ||||||| ||||||||||||||||| ||||    
T  14036637 cccaaaaatccatttttaaactttcctaggttcaatctcaatctaaaaacttgcctaatcattattttacata-ttcaggcactcaaaaacatcta 14036731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 114 - 207
Target Start/End: Original strand, 14346667 - 14346761
Alignment:
Q  114 cccaaaaatccattcttaaactattccaggttcaatctcattctagaatcttttctaatcatta--ttacatagttcaggcactcaaaaacctcta 207  Q
    |||||||||||||| ||||||| | | ||||||||||||| |||| || |||  ||||||||||  ||||||| ||||||||||||||||| ||||    
T  14346667 cccaaaaatccatttttaaactttcctaggttcaatctcaatctaaaaacttgcctaatcattattttacata-ttcaggcactcaaaaacatcta 14346761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 115 - 207
Target Start/End: Complemental strand, 1867743 - 1867650
Alignment:
Q  115 ccaaaaatccattcttaaactattccaggttcaatctcattctagaatcttttctaatcattat--tacatagttcaggcactcaaaaacctcta 207  Q
    ||||||||||||| ||||||| | ||||||||||||||| |||| || |||  |||||||||||  |||||| |||||||||| |||||| ||||    
T  1867743 ccaaaaatccatttttaaactttcccaggttcaatctcaatctaaaaacttgcctaatcattattatacata-ttcaggcactaaaaaacatcta 1867650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 136 - 217
Target Start/End: Complemental strand, 27847580 - 27847498
Alignment:
Q  136 attccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaaggtccaact 217  Q
    ||||||||||||||||||| ||| | ||||| |||||||| |||| | | |||||||||||||||| | |||||||| |||||    
T  27847580 attccaggttcaatctcatcctaaattctttcctaatcataattagacatgttcaggcactcaaaagcatctaaggttcaact 27847498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 137 - 209
Target Start/End: Complemental strand, 3564099 - 3564026
Alignment:
Q  137 ttccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaag 209  Q
    |||||||||||||||||| ||| | ||||| ||||||||||||| | | |||||||||||||||| | ||||||    
T  3564099 ttccaggttcaatctcatcctacattctttcctaatcattattagacatgttcaggcactcaaaagcatctaag 3564026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 15754759 - 15754718
Alignment:
Q  1 aactcacatcaactcgtgcgacaagtatcgcatttaacctaa 42  Q
    ||||||||||||||||||||||||  ||||||||||||||||    
T  15754759 aactcacatcaactcgtgcgacaaagatcgcatttaacctaa 15754718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 58 - 107
Target Start/End: Original strand, 26212302 - 26212351
Alignment:
Q  58 ctgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggt 107  Q
    |||||| |||||||||||||  ||||||||||||| ||||||||||||||    
T  26212302 ctgggtcactcgcgaggcgagagcctctactcgccgtggcgagttcaggt 26212351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 105
Target Start/End: Complemental strand, 11995900 - 11995796
Alignment:
Q  1 aactcacatcaactcgtgcgacaagtatcgcatttaacctaacaaagaattctgtaactgggtaactcgcgaggcgatggcctctactcgccatggcgag 100  Q
    ||||||||||||||||  ||||||  |||||||||||||||| || | ||||||||||       ||||||||||||  |||||| || |||||||||||    
T  11995900 aactcacatcaactcgaacgacaaagatcgcatttaacctaaaaaggcattctgtaacacaaatgctcgcgaggcgagagcctctgcttgccatggcgag 11995801  T
Q  101 ttcag 105  Q
    |||||    
T  11995800 ttcag 11995796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 105
Target Start/End: Original strand, 15116731 - 15116835
Alignment:
Q  1 aactcacatcaactcgtgcgacaagtatcgcatttaacctaacaaagaattctgtaactgggtaactcgcgaggcgatggcctctactcgccatggcgag 100  Q
    ||||||||||||||||||||||||   || ||||||||||||||| | |||||||  |      |||||||||||||  |||||||||||| |||| |||    
T  15116731 aactcacatcaactcgtgcgacaaaggtcacatttaacctaacaaggcattctgtctcacaaggactcgcgaggcgagagcctctactcgctatggtgag 15116830  T
Q  101 ttcag 105  Q
    |||||    
T  15116831 ttcag 15116835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 66 - 158
Target Start/End: Original strand, 35366540 - 35366631
Alignment:
Q  66 ctcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactcccaaaaatccattcttaaactattccaggttcaatctcattcta 158  Q
    ||||||||||||  ||||| |||||||| ||||||||  |||  ||| | ||| |||||||||| | ||||||||| ||||||||||||||||    
T  35366540 ctcgcgaggcgagagcctc-actcgccacggcgagttagggtaaaacactcaagaatccattctgacactattccaagttcaatctcattcta 35366631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 66 - 105
Target Start/End: Complemental strand, 9177470 - 9177431
Alignment:
Q  66 ctcgcgaggcgatggcctctactcgccatggcgagttcag 105  Q
    |||||||||||| ||||||||||||| |||||||||||||    
T  9177470 ctcgcgaggcgagggcctctactcgctatggcgagttcag 9177431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 137 - 210
Target Start/End: Original strand, 12699218 - 12699292
Alignment:
Q  137 ttccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaagg 210  Q
    ||||||||||||| |||| ||| | ||||| ||||||||||||| | | |||||||||||||||| | |||||||    
T  12699218 ttccaggttcaatttcatcctacattctttcctaatcattattagacatgttcaggcactcaaaagcatctaagg 12699292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 56 - 106
Target Start/End: Complemental strand, 15008313 - 15008263
Alignment:
Q  56 aactgggtaactcgcgaggcgatggcctctactcgccatggcgagttcagg 106  Q
    ||||||| ||||||||||||||  |||||||||||| |||| |||||||||    
T  15008313 aactgggcaactcgcgaggcgagagcctctactcgctatggtgagttcagg 15008263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 103
Target Start/End: Original strand, 15113194 - 15113296
Alignment:
Q  1 aactcacatcaactcgtgcgacaagtatcgcatttaacctaacaaagaattctgtaactgggtaactcgcgaggcgatggcctctactcgccatggcgag 100  Q
    ||||||||||||||||||||||||   || ||||||||||||||| | || ||||  |      |||||||||||||  |||||||||||| ||||||||    
T  15113194 aactcacatcaactcgtgcgacaaaggtcacatttaacctaacaaggcatcctgtctcacaaggactcgcgaggcgagagcctctactcgctatggcgag 15113293  T
Q  101 ttc 103  Q
    |||    
T  15113294 ttc 15113296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 117 - 197
Target Start/End: Complemental strand, 15008199 - 15008118
Alignment:
Q  117 aaaaatccattcttaaactattccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactca 197  Q
    ||||||||||| | ||||| | ||||||||||||||| |||| ||  || |||||||||||||| | | |||||||||||||    
T  15008199 aaaaatccattttaaaactttcccaggttcaatctcaatctaaaaaattgtctaatcattattatacatgttcaggcactca 15008118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 58 - 107
Target Start/End: Original strand, 40443695 - 40443744
Alignment:
Q  58 ctgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggt 107  Q
    |||||| |||||||||||||  |||||| |||||| ||||||||||||||    
T  40443695 ctgggtcactcgcgaggcgagagcctctgctcgccgtggcgagttcaggt 40443744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 162 - 217
Target Start/End: Complemental strand, 11995768 - 11995712
Alignment:
Q  162 tcttttctaatcattattacata-gttcaggcactcaaaaacctctaaggtccaact 217  Q
    ||||| ||||||||||||| | | |||||||||||||||||| |||||||| |||||    
T  11995768 tctttcctaatcattattagacatgttcaggcactcaaaaacatctaaggttcaact 11995712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 117 - 222
Target Start/End: Complemental strand, 17017146 - 17017040
Alignment:
Q  117 aaaaatccattcttaaactattccaggttcaatctcattctagaatcttttctaatcattatt--acatagttcaggcactcaaaaacctctaaggtcca 214  Q
    ||||||||||| ||||||| |  |  ||||||||||| |||| || |||  ||||||||||||  ||||| ||||||||||||||| | ||||| || ||    
T  17017146 aaaaatccatttttaaactttctcttgttcaatctcaatctaaaaacttgcctaatcattattgtacata-ttcaggcactcaaaatcatctaaagttca 17017048  T
Q  215 acttaagg 222  Q
    ||||||||    
T  17017047 acttaagg 17017040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 151; Significance: 6e-80; HSPs: 2)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 151; E-Value: 6e-80
Query Start/End: Original strand, 1 - 256
Target Start/End: Original strand, 32786 - 33039
Alignment:
Q  1 aactcacatcaactcgtgcgacaagtatcgcatttaacctaacaaagaattctgtaactgggtaactcgcgaggcgatggcctctactcgccatggcgag 100  Q
    ||||||||||||||||||||||||  ||||||||||||| ||||| | |||||||||||||||| |||||||||||| ||||||||||||||||||||||    
T  32786 aactcacatcaactcgtgcgacaaagatcgcatttaacccaacaaggcattctgtaactgggtagctcgcgaggcgagggcctctactcgccatggcgag 32885  T
Q  101 ttcaggtgtaactcccaaaaatccattcttaaactattccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaa 199  Q
    ||||||||||||||||||||||||||||||| ||||||||| ||||||||||| |||||||||||| ||||||||||||||| | ||||||||||||| |    
T  32886 ttcaggtgtaactcccaaaaatccattcttagactattccaagttcaatctcaatctagaatctttcctaatcattattacacatgttcaggcactcaga 32985  T
Q  200 aacctctaaggtccaacttaaggggcaaaactactacgaaaccatgtcgactctctg 256  Q
    | | ||||| || ||||||||||  ||||   ||||||||| ||||| |||||||||    
T  32986 atcatctaaagttcaacttaaggaccaaa---actacgaaatcatgttgactctctg 33039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 137 - 210
Target Start/End: Complemental strand, 51619 - 51545
Alignment:
Q  137 ttccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaagg 210  Q
    |||||||||||||||||| ||| | ||| | ||||||||||||| | | |||||||||||||||| | |||||||    
T  51619 ttccaggttcaatctcatcctacattctctcctaatcattattaaacatgttcaggcactcaaaagcatctaagg 51545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0556 (Bit Score: 143; Significance: 3e-75; HSPs: 2)
Name: scaffold0556
Description:

Target: scaffold0556; HSP #1
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 1 - 256
Target Start/End: Original strand, 8266 - 8519
Alignment:
Q  1 aactcacatcaactcgtgcgacaagtatcgcatttaacctaacaaagaattctgtaactgggtaactcgcgaggcgatggcctctactcgccatggcgag 100  Q
    |||||||||||||||||| |||||  ||| ||||  ||||||||||| ||| |||||||||  |||||||||||||| |||||| |||||||||||||||    
T  8266 aactcacatcaactcgtgagacaaagatcacattatacctaacaaagcattatgtaactggacaactcgcgaggcgagggcctccactcgccatggcgag 8365  T
Q  101 ttcaggtgtaactcccaaaaatccattcttaaactattccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaa 199  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |  ||||| ||| ||||    
T  8366 ttcaggtgtaactcccaaaaatccattcttaaactattccaggttcaatctcaatctagaatcttttctaatcattattacacatattcagacacccaaa 8465  T
Q  200 aacctctaaggtccaacttaaggggcaaaactactacgaaaccatgtcgactctctg 256  Q
    ||| | |||||| ||||||||||| ||||   ||||||||| ||||| |||||||||    
T  8466 aacatttaaggttcaacttaagggtcaaa---actacgaaatcatgttgactctctg 8519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0556; HSP #2
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 1 - 210
Target Start/End: Original strand, 7060 - 7271
Alignment:
Q  1 aactcacatcaactcgtgcgacaagtatcgcatttaacctaa-caaagaattctgtaactgggtaactcgcgaggcgatggcctctactcgccatggcga 99  Q
    |||||||||||||| |||||||||| |||||||||||||||| ||| | ||||||||||| | || ||||| ||||||  ||||||||||||||||||||    
T  7060 aactcacatcaacttgtgcgacaagaatcgcatttaacctaaacaaggcattctgtaactagttagctcgcaaggcgagagcctctactcgccatggcga 7159  T
Q  100 gttcaggtgtaactcccaaaaatccattcttaaactattccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaa 198  Q
    ||||||||  |  || ||||||| |||||| |||   |||||||||||||||||||||  ||||||| ||||||||||||| | | ||||||||||||||    
T  7160 gttcaggttcagttcacaaaaattcattctaaaatctttccaggttcaatctcattctccaatctttcctaatcattattagacatgttcaggcactcaa 7259  T
Q  199 aaacctctaagg 210  Q
    |||| |||||||    
T  7260 aaacatctaagg 7271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 139; Significance: 8e-73; HSPs: 40)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 139; E-Value: 8e-73
Query Start/End: Original strand, 1 - 256
Target Start/End: Original strand, 23019657 - 23019910
Alignment:
Q  1 aactcacatcaactcgtgcgacaagtatcgcatttaacctaacaaagaattctgtaactgggtaactcgcgaggcgatggcctctactcgccatggcgag 100  Q
    ||||||||||||||||| ||||||  ||||||||||||||||| ||| ||| ||||| |||  |||||||||||| | ||||||||||||||||||||||    
T  23019657 aactcacatcaactcgttcgacaaagatcgcatttaacctaaccaagcattttgtaattggacaactcgcgaggcaagggcctctactcgccatggcgag 23019756  T
Q  101 ttcaggtgtaactcccaaaaatccattcttaaactattccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaa 199  Q
    |||||||||||||||||||||| |||||||||| ||||||||||||||||||| |||| ||||||| ||||||||||| ||| | |||||||||||||||    
T  23019757 ttcaggtgtaactcccaaaaattcattcttaaaatattccaggttcaatctcaatctaaaatctttcctaatcattatcacacatgttcaggcactcaaa 23019856  T
Q  200 aacctctaaggtccaacttaaggggcaaaactactacgaaaccatgtcgactctctg 256  Q
    | | |||||||| ||||||||||| ||||   ||||||||| ||||| |||||||||    
T  23019857 agcatctaaggttcaacttaagggtcaaa---actacgaaatcatgttgactctctg 23019910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 1 - 229
Target Start/End: Complemental strand, 27333155 - 27332926
Alignment:
Q  1 aactcacatcaactcgtgcgacaagtatcgcatttaacctaacaaagaattctgtaactgggtaactcgcgaggcgatggcctctactcgccatggcgag 100  Q
    ||||||||||||||||||||||||| ||| ||||||||||||||||| ||||||||| |||| |  |||||||||||  |||||||||||||||||||||    
T  27333155 aactcacatcaactcgtgcgacaaggatcacatttaacctaacaaagcattctgtaattgggcagttcgcgaggcgagagcctctactcgccatggcgag 27333056  T
Q  101 ttcaggtgtaactcccaaaaatccattcttaaactattccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaa 199  Q
    |||||||| ||||| ||||| | |||||| |||   |||||||||||| ||||||||| ||||||| |||||||| |||| | | |||||| ||||||||    
T  27333055 ttcaggtgcaactcacaaaacttcattctaaaatctttccaggttcaacctcattctaaaatctttcctaatcatcattatacatgttcagccactcaaa 27332956  T
Q  200 aacctctaaggtccaacttaaggggcaaaa 229  Q
    | | |||||||| |||||||| || |||||    
T  27332955 agcatctaaggttcaacttaaaggtcaaaa 27332926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 1 - 229
Target Start/End: Complemental strand, 27393895 - 27393666
Alignment:
Q  1 aactcacatcaactcgtgcgacaagtatcgcatttaacctaacaaagaattctgtaactgggtaactcgcgaggcgatggcctctactcgccatggcgag 100  Q
    ||||||||||||||||||||||||| ||| ||||||||||||||||| ||||||||| |||| |  |||||||||||  |||||||||||||||||||||    
T  27393895 aactcacatcaactcgtgcgacaaggatcacatttaacctaacaaagcattctgtaattgggcagttcgcgaggcgagagcctctactcgccatggcgag 27393796  T
Q  101 ttcaggtgtaactcccaaaaatccattcttaaactattccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaa 199  Q
    |||||||| ||||| ||||| | |||||| |||   |||||||||||| ||||||||| ||||||| |||||||| |||| | | |||||| ||||||||    
T  27393795 ttcaggtgcaactcacaaaacttcattctaaaatctttccaggttcaacctcattctaaaatctttcctaatcatcattatacatgttcagccactcaaa 27393696  T
Q  200 aacctctaaggtccaacttaaggggcaaaa 229  Q
    | | |||||||| |||||||| || |||||    
T  27393695 agcatctaaggttcaacttaaaggtcaaaa 27393666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 1 - 229
Target Start/End: Original strand, 25644573 - 25644801
Alignment:
Q  1 aactcacatcaactcgtgcgacaagtatcgcatttaacctaacaaagaattctgtaactgggtaactcgcgaggcgatggcctctactcgccatggcgag 100  Q
    ||||| || |||||||||||||||  ||||||   |||||||  ||| |||||| ||| ||| |||||||||||||| ||||||||||||| ||||||||    
T  25644573 aactctcagcaactcgtgcgacaaagatcgcaaa-aacctaaacaagcattctgaaaccgggcaactcgcgaggcgagggcctctactcgctatggcgag 25644671  T
Q  101 ttcaggtgtaactcccaaaaatccattcttaaactattccaggttcaatctcattctagaatcttttctaatca---ttattacatagttcaggcactca 197  Q
    ||| |||||||||||||||||||||||||||||||||| |||||||||||||| |||| ||||||| |||||||   ||| ||||| |  ||||||||||    
T  25644672 ttcgggtgtaactcccaaaaatccattcttaaactatttcaggttcaatctcaatctaaaatctttcctaatcaacgtta-tacat-gaacaggcactca 25644769  T
Q  198 aaaacctctaaggtccaacttaaggggcaaaa 229  Q
    ||||| |||||||| |||||||| || |||||    
T  25644770 aaaacatctaaggttcaacttaaaggtcaaaa 25644801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 1 - 210
Target Start/End: Complemental strand, 4668084 - 4667874
Alignment:
Q  1 aactcacatcaactcgtgcgacaagtatcgcatttaacctaacaaagaattctgtaactgggtaactcgcgaggcgatggcctctactcgccatggcgag 100  Q
    |||||||| |||||||||||||||| ||||||||||||||| ||| | ||||||||| |||||| ||||||||||||  |||||||||||||||||||||    
T  4668084 aactcacaacaactcgtgcgacaaggatcgcatttaacctagcaaggcattctgtaaatgggtagctcgcgaggcgagagcctctactcgccatggcgag 4667985  T
Q  101 ttcaggtgtaactcccaaaaatccattcttaaact-attccaggttcaatctcattctagaatcttttctaatcattattaca-tagttcaggcactcaa 198  Q
    |||||||  |  || ||||||| ||||| ||||||  |||||||| |||||||| |||| | ||||| |||||| |||||| | | ||||||||||||||    
T  4667984 ttcaggttcagttcacaaaaattcattc-taaactctttccaggtccaatctcactctacattctttcctaatcgttattagacttgttcaggcactcaa 4667886  T
Q  199 aaacctctaagg 210  Q
    || | |||||||    
T  4667885 aagcatctaagg 4667874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 66 - 217
Target Start/End: Complemental strand, 22080543 - 22080391
Alignment:
Q  66 ctcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactcccaaaaatccattcttaaactattccaggttcaatctcattctagaatctt 165  Q
    ||||||||||||  |||||||||||||||||||||||||||| ||||||||| || | | |||||||||||||||||||||||||| | |||  ||||||    
T  22080543 ctcgcgaggcgagagcctctactcgccatggcgagttcaggtataactcccataagttcgttcttaaactattccaggttcaatcttaatctctaatctt 22080444  T
Q  166 ttctaatcattattacata-gttcaggcactcaaaaacctctaaggtccaact 217  Q
    ||||||||||||||| | | |||||| ||||||||||| |||||||| |||||    
T  22080443 ttctaatcattattagacatgttcagtcactcaaaaacatctaaggttcaact 22080391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 69 - 220
Target Start/End: Complemental strand, 25956424 - 25956272
Alignment:
Q  69 gcgaggcgatggcctctactcgccatggcgagttcaggtgtaactcccaaaaatccattcttaaactattccaggttcaatctcattctagaatcttttc 168  Q
    |||||||||  |||||||||||||||||||| | ||||||||||||| ||||||||||||||||||||||||||||| ||||||| ||||||||||||||    
T  25956424 gcgaggcgagagcctctactcgccatggcgaatacaggtgtaactccaaaaaatccattcttaaactattccaggttaaatctcaatctagaatcttttc 25956325  T
Q  169 taatcattattacata-gttcaggcactcaaaaacctctaaggtccaacttaa 220  Q
     |||| | |||| | | |||||||||||||||||  |||||| | ||||||||    
T  25956324 caatcgtaattagacatgttcaggcactcaaaaatatctaagattcaacttaa 25956272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 202
Target Start/End: Original strand, 19652444 - 19652647
Alignment:
Q  1 aactcacatcaactcgtgcgacaagtatcgcatttaacctaa-caaagaattctgtaactgggtaactcgcgaggcgatggcctctactcgccatggcga 99  Q
    ||||||||||||||||||||||||  |||||||||| ||||| ||| | ||| ||||||| | || | ||||||||||  ||||||||||||||||||||    
T  19652444 aactcacatcaactcgtgcgacaaagatcgcatttatcctaaacaaggtattttgtaactagttagcccgcgaggcgagagcctctactcgccatggcga 19652543  T
Q  100 gttcaggtgtaactcccaaaaatccattcttaaactattccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaa 198  Q
    ||||||||  || || ||||||| |||||| ||    |||||||||||||||||||||  ||||||| ||||||||||||| | | ||||||||||||||    
T  19652544 gttcaggtacaattcacaaaaattcattctaaagtctttccaggttcaatctcattcttcaatctttcctaatcattattagacatgttcaggcactcaa 19652643  T
Q  199 aaac 202  Q
    ||||    
T  19652644 aaac 19652647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 210
Target Start/End: Complemental strand, 4674931 - 4674721
Alignment:
Q  1 aactcacatcaactcgtgcgacaagtatcgcatttaacctaacaaagaattctgtaactgggtaactcgcgaggcgatggcctctactcgccatggcgag 100  Q
    |||||||| |||||||||||||||| ||||||||||||||| ||| | ||||||||| |||||| ||||||||||||  |||||||||||||||| ||||    
T  4674931 aactcacaacaactcgtgcgacaaggatcgcatttaacctagcaaggcattctgtaaatgggtagctcgcgaggcgagagcctctactcgccatgacgag 4674832  T
Q  101 ttcaggtgtaactcccaaaaatccattcttaaact-attccaggttcaatctcattctagaatcttttctaatcattattaca-tagttcaggcactcaa 198  Q
    || ||||  |  || ||||||| ||||| ||||||  |||||||| |||||||| |||| | ||||| |||||| |||||| | | ||||||||||||||    
T  4674831 ttaaggttcagttcacaaaaattcattc-taaactctttccaggtccaatctcactctacattctttcctaatcgttattagacttgttcaggcactcaa 4674733  T
Q  199 aaacctctaagg 210  Q
    || | |||||||    
T  4674732 aagcatctaagg 4674721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 1 - 210
Target Start/End: Complemental strand, 4185694 - 4185484
Alignment:
Q  1 aactcacatcaactcgtgcgacaagtatcgcatttaacctaacaaagaattctgtaactgggtaactcgcgaggcgatggcctctactcgccatggcgag 100  Q
    |||||||| ||||||||||| |||| ||||||||||||||| ||| | ||||| ||| |||||| ||||||||||||  |||||||||||||||||||||    
T  4185694 aactcacaacaactcgtgcggcaaggatcgcatttaacctagcaaggcattctataaatgggtagctcgcgaggcgagagcctctactcgccatggcgag 4185595  T
Q  101 ttcaggtgtaactcccaaaaatccattcttaaact-attccaggttcaatctcattctagaatcttttctaatcattattaca-tagttcaggcactcaa 198  Q
    |||||||  |  || ||||||| ||||| ||||||  ||||||||||||||||| |||| | |||||  ||||| |||||| | | ||||| ||||||||    
T  4185594 ttcaggttcagttcacaaaaattcattc-taaactctttccaggttcaatctcactctacattctttcataatcgttattagacttgttcatgcactcaa 4185496  T
Q  199 aaacctctaagg 210  Q
    || | |||||||    
T  4185495 aagcatctaagg 4185484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 1 - 210
Target Start/End: Original strand, 4189206 - 4189416
Alignment:
Q  1 aactcacatcaactcgtgcgacaagtatcgcatttaacctaacaaagaattctgtaactgggtaactcgcgaggcgatggcctctactcgccatggcgag 100  Q
    |||||||| |||||||||||||||  ||||||||||||||| ||| | ||||||||| |||||| ||||||||||||  |||||||||||||||| ||||    
T  4189206 aactcacaacaactcgtgcgacaacgatcgcatttaacctagcaaggcattctgtaaatgggtagctcgcgaggcgagagcctctactcgccatgacgag 4189305  T
Q  101 ttcaggtgtaactcccaaaaatccattcttaaact-attccaggttcaatctcattctagaatcttttctaatcattattaca-tagttcaggcactcaa 198  Q
    || ||||  |  || ||||||| ||||| ||||||  |||||||| |||||||| |||| | ||||| |||||| |||||| | | ||||||||||||||    
T  4189306 tttaggttcagttcacaaaaattcattc-taaactctttccaggtccaatctcactctacattctttcctaatcgttattagacttgttcaggcactcaa 4189404  T
Q  199 aaacctctaagg 210  Q
    || | |||||||    
T  4189405 aagcatctaagg 4189416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 210
Target Start/End: Complemental strand, 29808755 - 29808544
Alignment:
Q  1 aactcacatcaactcgtgcgacaagtatcgcatttaacctaa-caaagaattctgtaactgggtaactcgcgaggcgatggcctctactcgccatggcga 99  Q
    ||||||||||||||||||||||||  |||||||| ||||||| ||| | ||||||||||      |||||||||||||  |||||| |||||||||||||    
T  29808755 aactcacatcaactcgtgcgacaaagatcgcatt-aacctaaacaaggcattctgtaacacaagtactcgcgaggcgagagcctctgctcgccatggcga 29808657  T
Q  100 gttcaggtgtaactcccaaaaatccattcttaaactatt-ccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactca 197  Q
    ||||||||   | |||||||  | |||||| ||| | || |||||||||||||||||||| | ||||||||||||||||||| | | |||||||||||||    
T  29808656 gttcaggtcagattcccaaagtttcattctaaaaatctttccaggttcaatctcattctacattcttttctaatcattattagacatgttcaggcactca 29808557  T
Q  198 aaaacctctaagg 210  Q
    ||| | |||||||    
T  29808556 aaagcatctaagg 29808544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 50 - 210
Target Start/End: Original strand, 18457014 - 18457174
Alignment:
Q  50 ttctgtaactgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactcccaaaaa-tccattcttaaactattccaggttcaa 148  Q
    |||||||| |||| ||||||||||||||  |||||||||||||||||| |||||||||  | || ||||||| | ||||||| || || |||||||||||    
T  18457014 ttctgtaattgggcaactcgcgaggcgagagcctctactcgccatggctagttcaggt-cagcttccaaaaagttcattctt-aattaatccaggttcaa 18457111  T
Q  149 tctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaagg 210  Q
    |||||||||| | ||||| ||||||||||||| | | |||||||||||||||| | |||||||    
T  18457112 tctcattctacattctttcctaatcattattaaacatgttcaggcactcaaaagcatctaagg 18457174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 1 - 210
Target Start/End: Complemental strand, 28496344 - 28496134
Alignment:
Q  1 aactcacatcaactcgtgcgacaagtatcgcatttaacctaa-caaagaattctgtaactgggtaactcgcgaggcgatggcctctactcgccatggcga 99  Q
    ||||||||||||||||||||||||  |||||||| ||||||| ||| | ||||||||||      |||||||||||||  |||||| |||||||||||||    
T  28496344 aactcacatcaactcgtgcgacaaagatcgcatt-aacctaaacaaggcattctgtaacacaagtactcgcgaggcgagagcctctgctcgccatggcga 28496246  T
Q  100 gttcaggtgtaactcccaaaaatc-cattcttaaactattccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactca 197  Q
    ||||||||   | || ||||| |  |||||| |  || |||||||||||||||||||||| | ||||||||||||||||||| | | |||||||||||||    
T  28496245 gttcaggtcagattctcaaaagtttcattctaagtct-ttccaggttcaatctcattctacattcttttctaatcattattagacatgttcaggcactca 28496147  T
Q  198 aaaacctctaagg 210  Q
    ||| | |||||||    
T  28496146 aaagcatctaagg 28496134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 106
Target Start/End: Original strand, 19668623 - 19668728
Alignment:
Q  1 aactcacatcaactcgtgcgacaagtatcgcatttaacctaacaaagaattctgtaactgggtaactcgcgaggcgatggcctctactcgccatggcgag 100  Q
    ||||||||||||||||||||||||   || ||||||||||||||| |  |||||||| |||  | ||||||||||||  |||||||||||| ||||||||    
T  19668623 aactcacatcaactcgtgcgacaaaggtcacatttaacctaacaaggtgttctgtaattggacagctcgcgaggcgagagcctctactcgctatggcgag 19668722  T
Q  101 ttcagg 106  Q
    ||||||    
T  19668723 ttcagg 19668728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 115 - 233
Target Start/End: Complemental strand, 9098206 - 9098087
Alignment:
Q  115 ccaaaaatccattcttaaactattccaggttcaatctcattctagaatcttttctaatcattattacat-agttcaggcactcaaaaacctctaaggtcc 213  Q
    ||||||||||||| ||||||| | ||||||||||| ||| ||||||| ||| |||||||||||||| ||  ||||||||||||| || | ||||| || |    
T  9098206 ccaaaaatccatttttaaactttcccaggttcaatatcaatctagaaacttgtctaatcattattatatctgttcaggcactcagaatcatctaaagttc 9098107  T
Q  214 aacttaaggggcaaaactac 233  Q
     ||||||||| |||||||||    
T  9098106 gacttaagggtcaaaactac 9098087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 3 - 107
Target Start/End: Complemental strand, 31155267 - 31155163
Alignment:
Q  3 ctcacatcaactcgtgcgacaagtatcgcatttaacctaacaaagaattctgtaactgggtaactcgcgaggcgatggcctctactcgccatggcgagtt 102  Q
    |||||| |||||||||||||||| | ||||||||||||||||| | ||  |||||  ||||| ||||||||||||  |||||| |||||||||| ||||     
T  31155267 ctcacaacaactcgtgcgacaaggaccgcatttaacctaacaaggcatgttgtaaaggggtagctcgcgaggcgagagcctctgctcgccatggagagta 31155168  T
Q  103 caggt 107  Q
    |||||    
T  31155167 caggt 31155163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 136 - 210
Target Start/End: Complemental strand, 20360707 - 20360632
Alignment:
Q  136 attccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaagg 210  Q
    ||||||||||||||||||| ||| | ||||| ||||||||||||| | | |||||||||||||||||| |||||||    
T  20360707 attccaggttcaatctcatcctacattctttcctaatcattattagacatgttcaggcactcaaaaacatctaagg 20360632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 58 - 210
Target Start/End: Original strand, 29060847 - 29061000
Alignment:
Q  58 ctgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactcccaaaaatccattcttaaactattccaggttcaatctcattct 157  Q
    |||||| |||||||||||||  ||||||||||| | ||||||||||||||   | | |||||| | ||||||  ||   |||||||||||||||||| ||    
T  29060847 ctgggtcactcgcgaggcgagagcctctactcgtcgtggcgagttcaggtcagatttccaaaagttcattctacaatctttccaggttcaatctcatcct 29060946  T
Q  158 agaatcttttctaatcattatt--acatagttcaggcactcaaaaacctctaagg 210  Q
    | | || || ||||||||||||  |||| |||||||||||||||| | |||||||    
T  29060947 acattccttcctaatcattattggacat-gttcaggcactcaaaagcatctaagg 29061000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 58 - 210
Target Start/End: Complemental strand, 19303355 - 19303202
Alignment:
Q  58 ctgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactcccaaaaatc-cattcttaaactattccaggttcaatctcattc 156  Q
    |||||| |||| ||||||||  |||||| |||||| ||||||||||||||   | | |||||| |  |||||| || || ||| ||||||||||||||||    
T  19303355 ctgggtcactctcgaggcgagagcctctgctcgccgtggcgagttcaggtcagatttccaaaagtttcattctaaatcttttc-aggttcaatctcattc 19303257  T
Q  157 tagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaagg 210  Q
    || | ||||| ||||||||||||| | | |||||||||||||||| | |||||||    
T  19303256 tacattctttcctaatcattattagacatgttcaggcactcaaaagcatctaagg 19303202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 136 - 217
Target Start/End: Complemental strand, 20638030 - 20637948
Alignment:
Q  136 attccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaaggtccaact 217  Q
    ||||||||||||||||||| ||| | ||||| ||||||||||||| | | |||||||||||||||| | |||||||| |||||    
T  20638030 attccaggttcaatctcatcctacattctttcctaatcattattagacatgttcaggcactcaaaagcatctaaggttcaact 20637948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 137 - 217
Target Start/End: Original strand, 1561689 - 1561770
Alignment:
Q  137 ttccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaaggtccaact 217  Q
    ||||||||||||||||||||||   ||||| ||||||||||||| | | |||||||||||||||| | |||||||| |||||    
T  1561689 ttccaggttcaatctcattctactttctttcctaatcattattagacatgttcaggcactcaaaagcatctaaggttcaact 1561770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 114 - 233
Target Start/End: Original strand, 20109578 - 20109698
Alignment:
Q  114 cccaaaaatccattcttaaactattccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaaggtc 212  Q
    ||||| |||||||| ||||||| | | ||||||||||||| |||| || |||  ||||||||||||| | | ||||||||||||| || | ||||| ||     
T  20109578 cccaataatccatttttaaactttcctaggttcaatctcaatctaaaaacttgcctaatcattattatacatgttcaggcactcagaatcatctaaagtt 20109677  T
Q  213 caacttaaggggcaaaactac 233  Q
    ||||||||||  |||||||||    
T  20109678 caacttaaggatcaaaactac 20109698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 58 - 177
Target Start/End: Complemental strand, 25629169 - 25629050
Alignment:
Q  58 ctgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactcccaaaaatccattcttaaactattccaggttcaatctcattct 157  Q
    |||||| |||||||||||||  |||||| ||||||| ||||||| |||||   | || ||||| |  ||||| |||   |||||||||||||||||||||    
T  25629169 ctgggtcactcgcgaggcgagagcctctgctcgccacggcgagtacaggtcataatcacaaaagtttattctaaaatatttccaggttcaatctcattct 25629070  T
Q  158 agaatcttttctaatcatta 177  Q
    | ||| ||| ||||||||||    
T  25629069 acaatatttcctaatcatta 25629050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 136 - 217
Target Start/End: Complemental strand, 18821566 - 18821484
Alignment:
Q  136 attccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaaggtccaact 217  Q
    ||||||||||||||||||| ||| | ||| | ||||||||||||| | | |||||||||||||||| | |||||||| |||||    
T  18821566 attccaggttcaatctcatcctacattctctcctaatcattattaaacatgttcaggcactcaaaagcatctaaggttcaact 18821484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 137 - 210
Target Start/End: Complemental strand, 22779962 - 22779888
Alignment:
Q  137 ttccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaagg 210  Q
    |||||||||||||||||| ||| | ||||| ||||||||||||| | | |||||||||||||||| | |||||||    
T  22779962 ttccaggttcaatctcatcctacattctttcctaatcattattagacatgttcaggcactcaaaagcatctaagg 22779888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 1561552 - 1561593
Alignment:
Q  1 aactcacatcaactcgtgcgacaagtatcgcatttaacctaa 42  Q
    ||||||||||||||||||||||||  ||||||||||||||||    
T  1561552 aactcacatcaactcgtgcgacaaagatcgcatttaacctaa 1561593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 136 - 217
Target Start/End: Complemental strand, 16920380 - 16920298
Alignment:
Q  136 attccaggttcaatctcattctagaatcttttctaatcattatt--acatagttcaggcactcaaaaacctctaaggtccaact 217  Q
    ||||||||| |||||| || ||| | ||||||||||||||||||  ||||| ||||||||||||||| | |||||||| |||||    
T  16920380 attccaggtacaatcttatcctacattcttttctaatcattattagacata-ttcaggcactcaaaagcatctaaggttcaact 16920298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 66 - 104
Target Start/End: Original strand, 17106048 - 17106086
Alignment:
Q  66 ctcgcgaggcgatggcctctactcgccatggcgagttca 104  Q
    |||||||| ||| ||||||||||||||||||||||||||    
T  17106048 ctcgcgagtcgagggcctctactcgccatggcgagttca 17106086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 137 - 210
Target Start/End: Complemental strand, 18409562 - 18409488
Alignment:
Q  137 ttccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaagg 210  Q
    |||||||||||||||||||||| | ||||| |||||||||| || | | ||| |||||||||||| | |||||||    
T  18409562 ttccaggttcaatctcattctacattctttcctaatcattaatagacatgttaaggcactcaaaagcatctaagg 18409488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 58 - 107
Target Start/End: Original strand, 11185808 - 11185857
Alignment:
Q  58 ctgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggt 107  Q
    |||||| |||| |||||||| ||||||| |||||| ||||||||||||||    
T  11185808 ctgggtcactcacgaggcgagggcctctgctcgccgtggcgagttcaggt 11185857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 58 - 107
Target Start/End: Complemental strand, 16920448 - 16920399
Alignment:
Q  58 ctgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggt 107  Q
    |||||| |||||| ||||||  |||||| |||||||||||||||||||||    
T  16920448 ctgggtcactcgcaaggcgagagcctctgctcgccatggcgagttcaggt 16920399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 71 - 104
Target Start/End: Complemental strand, 18177471 - 18177438
Alignment:
Q  71 gaggcgatggcctctactcgccatggcgagttca 104  Q
    ||||||| ||||||||||||||||||||||||||    
T  18177471 gaggcgagggcctctactcgccatggcgagttca 18177438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 71 - 104
Target Start/End: Original strand, 18204400 - 18204433
Alignment:
Q  71 gaggcgatggcctctactcgccatggcgagttca 104  Q
    ||||||| ||||||||||||||||||||||||||    
T  18204400 gaggcgagggcctctactcgccatggcgagttca 18204433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 66 - 107
Target Start/End: Complemental strand, 18821626 - 18821585
Alignment:
Q  66 ctcgcgaggcgatggcctctactcgccatggcgagttcaggt 107  Q
    ||||||||||||  |||||| |||||||||||||||||||||    
T  18821626 ctcgcgaggcgagagcctctgctcgccatggcgagttcaggt 18821585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 58 - 107
Target Start/End: Complemental strand, 20360775 - 20360726
Alignment:
Q  58 ctgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggt 107  Q
    |||||| |||||||||||||  |||||  |||||||||||||||||||||    
T  20360775 ctgggtcactcgcgaggcgagagcctcagctcgccatggcgagttcaggt 20360726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 22080609 - 22080576
Alignment:
Q  1 aactcacatcaactcgtgcgacaagtatcgcatt 34  Q
    ||||||||||||||||||||||||| ||||||||    
T  22080609 aactcacatcaactcgtgcgacaaggatcgcatt 22080576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 66 - 178
Target Start/End: Original strand, 16830111 - 16830223
Alignment:
Q  66 ctcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactcccaaaaatccattcttaaactattccaggttcaatctcattctagaatctt 165  Q
    ||||||||||||  |||||||||||||| |||||||| ||||  ||| | ||| |||||||||| |  |  ||||  |||||||||||||||| ||  ||    
T  16830111 ctcgcgaggcgagagcctctactcgccacggcgagttaaggtaaaacgctcaagaatccattctgactcatttccgagttcaatctcattctaaaacttt 16830210  T
Q  166 ttctaatcattat 178  Q
      |||||||||||    
T  16830211 gcctaatcattat 16830223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 116 - 180
Target Start/End: Original strand, 19023814 - 19023878
Alignment:
Q  116 caaaaatccattcttaaactattccaggttcaatctcattctagaatcttttctaatcattatta 180  Q
    |||||||||||| ||||||| |  |||||||||||||| |||| || |||  |||||||||||||    
T  19023814 caaaaatccatttttaaactttctcaggttcaatctcaatctaaaaacttgcctaatcattatta 19023878  T

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Target: chr6; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 115 - 220
Target Start/End: Original strand, 19668812 - 19668918
Alignment:
Q  115 ccaaaaatccattcttaaactattccaggttcaatctcattctagaatcttttctaatcattat--tacatagttcaggcactcaaaaacctctaaggtc 212  Q
    |||||||| |||| |||||||   ||||||||||||||| | || || ||| ||||||||||||  ||||| |||||| |||||| |||| ||||||||     
T  19668812 ccaaaaattcatttttaaacttccccaggttcaatctcaatataaaaacttgtctaatcattatgatacat-gttcagacactcagaaacatctaaggtt 19668910  T
Q  213 caacttaa 220  Q
    | ||||||    
T  19668911 cgacttaa 19668918  T

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Target: scaffold0078 (Bit Score: 138; Significance: 3e-72; HSPs: 1)
Name: scaffold0078
Description:

Target: scaffold0078; HSP #1
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 1 - 233
Target Start/End: Original strand, 10778 - 11011
Alignment:
Q  1 aactcacatcaactcgtgcgacaagtatcgcatttaacctaacaaagaattctgtaactgggtaactcgcgaggcgatggcctctactcgccatggcgag 100  Q
    |||||||||||||||||||||||   ||||||||||||||||||| | ||| || |||| |||||||||||||||||  |||||||||||| ||||||||    
T  10778 aactcacatcaactcgtgcgacagagatcgcatttaacctaacaaggcattttggaactaggtaactcgcgaggcgagagcctctactcgctatggcgag 10877  T
Q  101 ttcaggtgtaactcccaaaaatccattcttaaactattccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaa 199  Q
    |||||||||||||| ||||||| |||||||||||||||||||||||||||||| ||||| |||||| ||||||||||||||| | |||||||||||||||    
T  10878 ttcaggtgtaactcacaaaaattcattcttaaactattccaggttcaatctcagtctaggatctttcctaatcattattacacatgttcaggcactcaaa 10977  T
Q  200 aacctctaaggtccaacttaaggggcaaaactac 233  Q
    ||| |||||| | ||||||||||  |||||||||    
T  10978 aacatctaagattcaacttaaggatcaaaactac 11011  T

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Target: chr5 (Bit Score: 135; Significance: 2e-70; HSPs: 29)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 1 - 256
Target Start/End: Complemental strand, 26011905 - 26011652
Alignment:
Q  1 aactcacatcaactcgtgcgacaagtatcgcatttaacctaacaaagaattctgtaactgggtaactcgcgaggcgatggcctctactcgccatggcgag 100  Q
    |||||||||||||||||| |||||  ||| ||||||||||||||||| ||||||||||| |  |||||||||||||| ||||||||||||||||||||||    
T  26011905 aactcacatcaactcgtgtgacaaagatcacatttaacctaacaaagcattctgtaactagacaactcgcgaggcgaaggcctctactcgccatggcgag 26011806  T
Q  101 ttcaggtgtaactcccaaaaatccattcttaaactattccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaa 199  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||  |||||||||||||| | ||| || |||||| |    
T  26011805 ttcaggtgtaactcccaaaaatccattcttaaactattccaggttcaatctcaatttagaatctttcttaatcattattacacatgtttagacactcata 26011706  T
Q  200 aacctctaaggtccaacttaaggggcaaaactactacgaaaccatgtcgactctctg 256  Q
    | | ||||| || ||||||||||  ||||   ||||||||| ||||| |||||||||    
T  26011705 atcatctaaagttcaacttaaggatcaaa---actacgaaatcatgttgactctctg 26011652  T

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Target: chr5; HSP #2
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 1 - 229
Target Start/End: Complemental strand, 21329367 - 21329137
Alignment:
Q  1 aactcacatcaactcgtgcgacaagtatcgcatttaacctaa-caaagaattctgtaactgggtaactcgcgaggcgatggcctctactcgccatggcga 99  Q
    ||||||||||||||||||||||||  |||||||||||||||| ||| | ||||||||||| ||||| |||||||||||  |||||||||||| |||||||    
T  21329367 aactcacatcaactcgtgcgacaaagatcgcatttaacctaaacaaggcattctgtaactaggtaattcgcgaggcgagagcctctactcgctatggcga 21329268  T
Q  100 gttcaggtgtaactcccaaaaatccattcttaaactattccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaa 198  Q
    ||||| ||| ||||||||||||| ||||| |||| ||||||||||||||||||| ||||||||||||||||||||| | || | | ||||||||||||||    
T  21329267 gttcaagtgcaactcccaaaaattcattcctaaattattccaggttcaatctcaatctagaatcttttctaatcataactagacatgttcaggcactcaa 21329168  T
Q  199 aaacctctaaggtccaacttaaggggcaaaa 229  Q
    |||| |||||||| |||||||| || |||||    
T  21329167 aaacatctaaggttcaacttaaaggtcaaaa 21329137  T

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Target: chr5; HSP #3
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 49 - 256
Target Start/End: Original strand, 22144348 - 22144553
Alignment:
Q  49 attctgtaactgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactcccaaaaatccattcttaaactattccaggttcaa 148  Q
    |||||||||||||| ||||||||||||||  |||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  22144348 attctgtaactgggcaactcgcgaggcgagagcctctactcgctatggcgagttcaggtgtaactcccaaaaatccattcttaaattattccaggttcaa 22144447  T
Q  149 tctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaaggtccaacttaaggggcaaaactactacgaaaccatgtc 247  Q
    ||||| |||||||||||| ||||||||| ||||| | |||||||||||||||| | |||||   |||||||||||  ||||   ||||||||| |||||     
T  22144448 tctcaatctagaatctttcctaatcattgttacacatgttcaggcactcaaaatcatctaaataccaacttaaggatcaaa---actacgaaatcatgtt 22144544  T
Q  248 gactctctg 256  Q
    |||||||||    
T  22144545 gactctctg 22144553  T

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Target: chr5; HSP #4
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 15 - 233
Target Start/End: Complemental strand, 5889033 - 5888813
Alignment:
Q  15 cgtgcgacaagtatcgcatttaacctaa-caaagaattctgtaactgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaact 113  Q
    ||||||||||  |||||||||||||||| ||| | ||||||||| |||||| ||||||||||||  ||||||||||||||||||||||||||||| ||||    
T  5889033 cgtgcgacaaagatcgcatttaacctaaacaaggcattctgtaaatgggtagctcgcgaggcgagagcctctactcgccatggcgagttcaggtgcaact 5888934  T
Q  114 cccaaaaatccattcttaaactattccaggttcaatctcattctagaatcttttctaatcattat--tacatagttcaggcactcaaaaacctctaaggt 211  Q
    | |||| || |||||||||||||||||| ||||||||||| |||| ||||||| |||||||| ||  |||| ||||||||||||||||||| |||||| |    
T  5888933 cacaaagattcattcttaaactattccatgttcaatctcaatctacaatctttcctaatcatcatcataca-agttcaggcactcaaaaacatctaagct 5888835  T
Q  212 ccaacttaaggggcaaaactac 233  Q
     | |||||| || |||||||||    
T  5888834 tcgacttaaaggtcaaaactac 5888813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 1 - 233
Target Start/End: Complemental strand, 21741415 - 21741181
Alignment:
Q  1 aactcacatcaactcgtgcgacaagtatcgcatttaacctaacaaaga-attctgtaactgggtaactcgcgaggcgatggcctctactcgccatggcga 99  Q
    ||||||||||||||||||||||||  ||||| ||||||||||  |||| ||| ||||||||| || ||| ||||||||  ||||||||||||||||||||    
T  21741415 aactcacatcaactcgtgcgacaaagatcgcttttaacctaaacaagacattatgtaactggttagctcacgaggcgagagcctctactcgccatggcga 21741316  T
Q  100 gttcaggtgtaactcccaaaaatccattcttaaactattccaggttcaatctcattctagaatcttttctaatcattat--tacatagttcaggcactca 197  Q
    ||||||||| ||||| || |||| | |||||||||||||||||||||||||||| |||| ||||||| ||| |||| ||  |||| ||||||||||||||    
T  21741315 gttcaggtgcaactcacataaattcgttcttaaactattccaggttcaatctcaatctataatctttcctattcatcatcataca-agttcaggcactca 21741217  T
Q  198 aaaacctctaaggtccaacttaaggggcaaaactac 233  Q
    ||||  |||||||| | |||||| || |||||||||    
T  21741216 aaaatatctaaggttcgacttaaaggtcaaaactac 21741181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 1 - 210
Target Start/End: Complemental strand, 22959405 - 22959194
Alignment:
Q  1 aactcacatcaactcgtgcgacaagtatcgcatttaacctaa-caaagaattctgtaactgggtaactcgcgaggcgatggcctctactcgccatggcga 99  Q
    |||||||||||||| |||| ||||| |||||||||||||||| ||| | ||||||||||| | || ||||||||||||  ||||||||||||||||||||    
T  22959405 aactcacatcaacttgtgcaacaagaatcgcatttaacctaaacaaggcattctgtaactagttagctcgcgaggcgagagcctctactcgccatggcga 22959306  T
Q  100 gttcaggtgtaactcccaaaaatccattcttaaactat-tccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactca 197  Q
    ||||||||  |  || ||||||| ||||| |||| | | ||||||||||||||||||||  ||||||| ||||||||||||| | | |||||||||||||    
T  22959305 gttcaggttcagttcacaaaaattcattc-taaagtctctccaggttcaatctcattctccaatctttcctaatcattattagacatgttcaggcactca 22959207  T
Q  198 aaaacctctaagg 210  Q
    ||||| |||||||    
T  22959206 aaaacatctaagg 22959194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 210
Target Start/End: Original strand, 21565793 - 21566004
Alignment:
Q  1 aactcacatcaactcgtgcgacaagtatcgcatttaacctaacaaaga-attctgtaactgggtaactcgcgaggcgatggcctctactcgccatggcga 99  Q
    ||||||||||||||||||||||||  ||||||||| || |||  |||  ||||||||||| | || ||| ||||||||  |||||| |||||||||||||    
T  21565793 aactcacatcaactcgtgcgacaaagatcgcattttacataaacaagtcattctgtaactagttagctcacgaggcgagagcctctgctcgccatggcga 21565892  T
Q  100 gttcaggtgtaactcccaaaaatccattcttaaactattccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaa 198  Q
    ||||||||  || || | ||||| |||||| |||   |||||||||||||||||||||  ||||||| ||||||||||||| | | ||||||||||||||    
T  21565893 gttcaggtacaattcacgaaaattcattctaaaatctttccaggttcaatctcattctccaatctttcctaatcattattagacatgttcaggcactcaa 21565992  T
Q  199 aaacctctaagg 210  Q
    |||| |||||||    
T  21565993 aaacatctaagg 21566004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 1 - 109
Target Start/End: Complemental strand, 21502024 - 21501917
Alignment:
Q  1 aactcacatcaactcgtgcgacaagtatcgcatttaacctaacaaagaattctgtaactgggtaactcgcgaggcgatggcctctactcgccatggcgag 100  Q
    |||| ||||||||||||||||||| |||||||||||||| ||||| | |||||| ||||||||||||||||||||||  |||||||||||| ||||||||    
T  21502024 aactaacatcaactcgtgcgacaaatatcgcatttaacccaacaaggcattctg-aactgggtaactcgcgaggcgagagcctctactcgctatggcgag 21501926  T
Q  101 ttcaggtgt 109  Q
    |||||||||    
T  21501925 ttcaggtgt 21501917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 1 - 210
Target Start/End: Original strand, 19669148 - 19669360
Alignment:
Q  1 aactcacatcaactcgtgcgacaagtatcgcatttaacctaa-caaagaattctgtaactgggtaactcgcgaggcgatggcctctactcgccatggcga 99  Q
    |||||||||||||| |||||||||| ||| |||||| ||||| ||| | ||||||||||| | || || | |||||||  |||||||| |||||||||||    
T  19669148 aactcacatcaacttgtgcgacaagaatcacatttatcctaaacaaggcattctgtaactagttagctggtgaggcgagagcctctacacgccatggcga 19669247  T
Q  100 gttcaggtgtaactc-ccaaaaatccattcttaaactattccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactca 197  Q
    ||||||||  || || | |||||| |||||| ||    ||||| ||||||||||||||   ||||||| ||||||||||||| | | |||||| ||||||    
T  19669248 gttcaggtacaattcacaaaaaattcattctaaagtctttccacgttcaatctcattccccaatctttcctaatcattattagacatgttcagacactca 19669347  T
Q  198 aaaacctctaagg 210  Q
    ||||| |||||||    
T  19669348 aaaacatctaagg 19669360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 104 - 229
Target Start/End: Complemental strand, 21498785 - 21498659
Alignment:
Q  104 aggtgtaactcccaaaaatccattcttaaactattccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaac 202  Q
    ||||||||||| |||||||  |||||| |||||||||||||||||||||| |||| ||||| | ||||| ||||||| | | ||||||||||||||||||    
T  21498785 aggtgtaactctcaaaaatttattcttcaactattccaggttcaatctcaatctacaatctctcctaataattattatacatgttcaggcactcaaaaac 21498686  T
Q  203 ctctaaggtccaacttaaggggcaaaa 229  Q
     || ||||| |||||||| || |||||    
T  21498685 atccaaggttcaacttaaaggtcaaaa 21498659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 217
Target Start/End: Complemental strand, 21871442 - 21871225
Alignment:
Q  1 aactcacatcaactcgtgcgacaagtatcgcatttaacctaacaaagaattctgtaactgggtaactcgcgaggcgatggcctctactcgccatggcgag 100  Q
    |||||| | |||||| ||||||||| ||||| ||||||||| ||| | ||||||||  ||| || |||||||| ||   |||||||||||||||||||||    
T  21871442 aactcataacaactcatgcgacaaggatcgcgtttaacctagcaaggcattctgtatttggttagctcgcgagccgggagcctctactcgccatggcgag 21871343  T
Q  101 ttcaggtgtaactcccaaaaatccatt-cttaaactattccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaa 198  Q
    | |||||   | || ||||| |||||| | ||| || |||||||||||||||||| ||| | ||||| |||||||||| || | | ||||||||||||||    
T  21871342 tacaggtcagaatcacaaaagtccattccataatct-ttccaggttcaatctcatcctacactctttcctaatcattaataaacatgttcaggcactcaa 21871244  T
Q  199 aaacctctaaggtccaact 217  Q
    || | |||||||| |||||    
T  21871243 aagcatctaaggttcaact 21871225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 217
Target Start/End: Complemental strand, 21875722 - 21875505
Alignment:
Q  1 aactcacatcaactcgtgcgacaagtatcgcatttaacctaacaaagaattctgtaactgggtaactcgcgaggcgatggcctctactcgccatggcgag 100  Q
    |||||| | |||||| ||||||||| ||||| ||||||||| ||| | ||||||||  ||| || |||||||| ||   |||||||||||||||||||||    
T  21875722 aactcataacaactcatgcgacaaggatcgcgtttaacctagcaaggcattctgtatttggttagctcgcgagccgggagcctctactcgccatggcgag 21875623  T
Q  101 ttcaggtgtaactcccaaaaatccatt-cttaaactattccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaa 198  Q
    | |||||   | || ||||| |||||| | ||| || |||||||||||||||||| ||| | ||||| |||||||||| || | | ||||||||||||||    
T  21875622 tacaggtcagaatcacaaaagtccattccataatct-ttccaggttcaatctcatcctacactctttcctaatcattaataaacatgttcaggcactcaa 21875524  T
Q  199 aaacctctaaggtccaact 217  Q
    || | |||||||| |||||    
T  21875523 aagcatctaaggttcaact 21875505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 49 - 210
Target Start/End: Complemental strand, 11581068 - 11580906
Alignment:
Q  49 attctgtaactgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactcccaaaaatccattcttaaa-ctattccaggttca 147  Q
    ||||||||| ||||| |||||||||||||  |||||| |||||||||||||||||||||   | || ||||  |  ||||| ||| ||| ||||||||||    
T  11581068 attctgtaaatgggtcactcgcgaggcgagagcctctgctcgccatggcgagttcaggtcagattctcaaagttttattctaaaatcta-tccaggttca 11580970  T
Q  148 atctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaagg 210  Q
    ||||||||||| | ||||| ||||||||||||| | | |||||||||||||||| | |||||||    
T  11580969 atctcattctacattctttcctaatcattattaaacatgttcaggcactcaaaagcttctaagg 11580906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 49 - 217
Target Start/End: Original strand, 1096765 - 1096934
Alignment:
Q  49 attctgtaactgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactcccaaaaatccattcttaaactattccaggttcaa 148  Q
    |||||||  |||||| |||||||||||||  ||||||||||||| ||||||||||||||   | | |||||| | ||||||  ||   |||||| |||||    
T  1096765 attctgtttctgggtcactcgcgaggcgagagcctctactcgccgtggcgagttcaggtcagatttccaaaagttcattctgcaatctttccagattcaa 1096864  T
Q  149 tctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaaggtccaact 217  Q
    |||||| ||| | ||||| ||||||||||||| | | |||||||||||||||| | |||||||| |||||    
T  1096865 tctcatcctacattctttcctaatcattattagacatgttcaggcactcaaaagcatctaaggttcaact 1096934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 58 - 210
Target Start/End: Complemental strand, 21985961 - 21985808
Alignment:
Q  58 ctgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactcccaaaaatc-cattcttaaactattccaggttcaatctcattc 156  Q
    |||||| ||||||||||||| ||||||| || ||| ||||||||||||||   | | |||||| |  |||||| || || ||||||||||||||||||||    
T  21985961 ctgggtcactcgcgaggcgagggcctctgcttgccgtggcgagttcaggtcagaattccaaaagtttcattctaaatct-ttccaggttcaatctcattc 21985863  T
Q  157 tagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaagg 210  Q
    || | ||||| ||||||||||||| | | |||||||||||||||| | |||||||    
T  21985862 tacattctttcctaatcattattagacatgttcaggcactcaaaagcatctaagg 21985808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 49 - 220
Target Start/End: Complemental strand, 36154651 - 36154479
Alignment:
Q  49 attctgtaactgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactcccaaaaatccattcttaaa-ctattccaggttca 147  Q
    ||||||||| | ||| |||||||||||||  ||||||||||||||||||||||||||||   | || ||||  |  ||||| ||| ||| ||||||||||    
T  36154651 attctgtaaataggtcactcgcgaggcgagagcctctactcgccatggcgagttcaggtcagattctcaaagttttattctaaaatcta-tccaggttca 36154553  T
Q  148 atctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaaggtccaacttaa 220  Q
    |||||| |||| | ||||| ||||||||||||| | | ||||| |||||||||| | |||||||  ||||||||    
T  36154552 atctcactctacattctttcctaatcattattagacatgttcaagcactcaaaagcatctaaggatcaacttaa 36154479  T

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Target: chr5; HSP #17
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 60 - 210
Target Start/End: Complemental strand, 23390309 - 23390157
Alignment:
Q  60 gggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactccca-aaaatccattcttaaactattccaggttcaatctcattcta 158  Q
    |||| ||||| |||||||| ||||||||||||||||||||||||||||   | ||||| ||  | ||||||  ||   |||||||||||||||||| |||    
T  23390309 gggtcactcgtgaggcgatagcctctactcgccatggcgagttcaggtcagaatcccacaagtttcattctacaatctttccaggttcaatctcatccta 23390210  T
Q  159 gaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaagg 210  Q
     | ||||| ||||||||||||| | | |||||||||||||||| | |||||||    
T  23390209 cattctttcctaatcattattagacatgttcaggcactcaaaagcatctaagg 23390157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 116 - 233
Target Start/End: Complemental strand, 20026619 - 20026501
Alignment:
Q  116 caaaaatccattcttaaactattccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaaggtcca 214  Q
    |||||||||||| ||||||| | ||| ||||||||||| |||| || |||  ||||||||||||| | | |||||||||||||||| | ||||| |  |     
T  20026619 caaaaatccatttttaaactttcccatgttcaatctcaatctaaaaacttgcctaatcattattatacatgttcaggcactcaaaatcatctaaagatcg 20026520  T
Q  215 acttaaggggcaaaactac 233  Q
    ||||||||| |||||||||    
T  20026519 acttaagggtcaaaactac 20026501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 114 - 222
Target Start/End: Complemental strand, 22177901 - 22177792
Alignment:
Q  114 cccaaaaatccattcttaaactattccaggttcaatctcattctagaatcttttctaatcattat--tacatagttcaggcactcaaaaacctctaaggt 211  Q
    |||||||||||||| ||||||| |  ||||||||| |||| |||| || |||  |||||||||||  |||||| ||||||||||||||| | |||| |||    
T  22177901 cccaaaaatccatttttaaactttctcaggttcaaactcaatctaaaaacttgcctaatcattattatacata-ttcaggcactcaaaatcatctagggt 22177803  T
Q  212 ccaacttaagg 222  Q
     ||||||||||    
T  22177802 tcaacttaagg 22177792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 136 - 217
Target Start/End: Complemental strand, 21292717 - 21292635
Alignment:
Q  136 attccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaaggtccaact 217  Q
    ||||||||||||||||||| ||| | ||||| ||||| ||||||| | | |||||||||||||||| | |||||||| |||||    
T  21292717 attccaggttcaatctcatcctacattctttcctaattattattagacatgttcaggcactcaaaagcatctaaggttcaact 21292635  T

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Target: chr5; HSP #21
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 58 - 210
Target Start/End: Original strand, 24529527 - 24529681
Alignment:
Q  58 ctgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactcccaaaaatc-cattcttaaactattccaggttcaatctcattc 156  Q
    |||||| |||||||||||||  |||||| |||||| |||||||||||| |   | | |||||| |  ||||||  |||  |||||||||||||||||| |    
T  24529527 ctgggtcactcgcgaggcgagagcctctgctcgccgtggcgagttcagatcagaattccaaaagtttcattctacaacctttccaggttcaatctcatcc 24529626  T
Q  157 tagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaagg 210  Q
    || | ||||| ||||||||||||| | | ||||||||||| |||| | |||||||    
T  24529627 tacattctttcctaatcattattagacatgttcaggcactgaaaagcatctaagg 24529681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 137 - 217
Target Start/End: Complemental strand, 19660572 - 19660491
Alignment:
Q  137 ttccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaaggtccaact 217  Q
    ||||||||| |||||||||| | | ||||| ||||||||||||| | | |||||||||||||||| | |||||||| |||||    
T  19660572 ttccaggtttaatctcattccacattctttcctaatcattattagacatgttcaggcactcaaaagcatctaaggttcaact 19660491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 137 - 200
Target Start/End: Original strand, 9078338 - 9078402
Alignment:
Q  137 ttccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaa 200  Q
    |||||||||||||||||||||| | | ||| ||||||||||||| | | ||||||||||||||||    
T  9078338 ttccaggttcaatctcattctacattttttcctaatcattattagacatgttcaggcactcaaaa 9078402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 66 - 104
Target Start/End: Original strand, 25744036 - 25744074
Alignment:
Q  66 ctcgcgaggcgatggcctctactcgccatggcgagttca 104  Q
    ||||||||||||  |||||||||||||||||||||||||    
T  25744036 ctcgcgaggcgagagcctctactcgccatggcgagttca 25744074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 58 - 107
Target Start/End: Original strand, 9078259 - 9078308
Alignment:
Q  58 ctgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggt 107  Q
    |||||| |||||||||||||  |||||| |||||| ||||||||||||||    
T  9078259 ctgggtcactcgcgaggcgagagcctctgctcgccgtggcgagttcaggt 9078308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 58 - 107
Target Start/End: Complemental strand, 21292785 - 21292736
Alignment:
Q  58 ctgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggt 107  Q
    |||||| |||||||||||||  |||||| |||||| ||||||||||||||    
T  21292785 ctgggtcactcgcgaggcgagagcctctgctcgccgtggcgagttcaggt 21292736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 58 - 107
Target Start/End: Original strand, 22075325 - 22075374
Alignment:
Q  58 ctgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggt 107  Q
    |||||| |||||||||||||  |||||| |||||| ||||||||||||||    
T  22075325 ctgggtcactcgcgaggcgagagcctctgctcgccgtggcgagttcaggt 22075374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 137 - 217
Target Start/End: Complemental strand, 22119928 - 22119847
Alignment:
Q  137 ttccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaaggtccaact 217  Q
    |||||||||||||||||| ||| | ||||| ||||||| ||||| | | |||||||||||||||  | |||||||| |||||    
T  22119928 ttccaggttcaatctcatcctacattctttcctaatcaatattagacatgttcaggcactcaaaggcatctaaggttcaact 22119847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 57 - 105
Target Start/End: Complemental strand, 20469702 - 20469654
Alignment:
Q  57 actgggtaactcgcgaggcgatggcctctactcgccatggcgagttcag 105  Q
    |||| |||||||||||||||||   |||||||||| |||||||||||||    
T  20469702 actgagtaactcgcgaggcgatccactctactcgctatggcgagttcag 20469654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0333 (Bit Score: 127; Significance: 1e-65; HSPs: 2)
Name: scaffold0333
Description:

Target: scaffold0333; HSP #1
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 1 - 229
Target Start/End: Original strand, 6862 - 7092
Alignment:
Q  1 aactcacatcaactcgtgcgacaagtatcgcatttaacctaa-caaagaattctgtaactgggtaactcgcgaggcgatggcctctactcgccatggcga 99  Q
    ||||||||||||||||||||||||  |||||||||||||||| ||| | ||||| ||||||| || || ||||||||| |||||||||||||||||||||    
T  6862 aactcacatcaactcgtgcgacaaagatcgcatttaacctaaacaatgcattctataactggttagcttgcgaggcgagggcctctactcgccatggcga 6961  T
Q  100 gttcaggtgtaactcccaaaaatccattcttaaactattccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaa 198  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||| | |||| ||||||| |||||||| |||| | | ||| ||||||||||    
T  6962 gttcaggtgtaattcccaaaaatccattcttaaactattccaggttcaatcttaatctataatctttcctaatcatcattatacatgtttaggcactcaa 7061  T
Q  199 aaacctctaaggtccaacttaaggggcaaaa 229  Q
    |||| |||||||| |||||||| || |||||    
T  7062 aaacatctaaggttcaacttaaaggtcaaaa 7092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0333; HSP #2
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 1 - 229
Target Start/End: Original strand, 14242 - 14472
Alignment:
Q  1 aactcacatcaactcgtgcgacaagtatcgcatttaacctaa-caaagaattctgtaactgggtaactcgcgaggcgatggcctctactcgccatggcga 99  Q
    ||||||||||||||||||||||||  |||||||||||||||| ||| | ||||| ||||||| || || ||||||||| |||||||||||||||||||||    
T  14242 aactcacatcaactcgtgcgacaaagatcgcatttaacctaaacaatgcattctataactggttagcttgcgaggcgagggcctctactcgccatggcga 14341  T
Q  100 gttcaggtgtaactcccaaaaatccattcttaaactattccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaa 198  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||| | |||| ||||||| |||||||| |||| | | ||| ||||||||||    
T  14342 gttcaggtgtaattcccaaaaatccattcttaaactattccaggttcaatcttaatctataatctttcctaatcatcattatacatgtttaggcactcaa 14441  T
Q  199 aaacctctaaggtccaacttaaggggcaaaa 229  Q
    |||| |||||||| |||||||| || |||||    
T  14442 aaacatctaaggttcaacttaaaggtcaaaa 14472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0507 (Bit Score: 126; Significance: 5e-65; HSPs: 1)
Name: scaffold0507
Description:

Target: scaffold0507; HSP #1
Raw Score: 126; E-Value: 5e-65
Query Start/End: Original strand, 1 - 233
Target Start/End: Complemental strand, 7928 - 7695
Alignment:
Q  1 aactcacatcaactcgtgcgacaagtatcgcatttaacctaacaaagaattctgtaactgggtaactcgcgaggcgatggcctctactcgccatggcgag 100  Q
    |||||||||||| || ||||||||  ||||||||||||||| ||| | |||||| |||  |||||||||||||||||  |||||||||||| ||||||||    
T  7928 aactcacatcaattcttgcgacaaagatcgcatttaacctagcaaggcattctggaacaaggtaactcgcgaggcgagagcctctactcgctatggcgag 7829  T
Q  101 ttcaggtgtaactcccaaaaatccattcttaaactattccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaa 199  Q
    |||||||||||| ||||||||| |||||||||||||||| ||||||||||||| ||||| |||||| ||||||||||||||| | |||||| ||||||||    
T  7828 ttcaggtgtaacccccaaaaattcattcttaaactattctaggttcaatctcagtctaggatctttcctaatcattattacacatgttcagacactcaaa 7729  T
Q  200 aacctctaaggtccaacttaaggggcaaaactac 233  Q
    ||| |||||||| ||||||||||  |||||||||    
T  7728 aacatctaaggttcaacttaaggatcaaaactac 7695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 123; Significance: 3e-63; HSPs: 39)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 1 - 229
Target Start/End: Complemental strand, 39706159 - 39705930
Alignment:
Q  1 aactcacatcaactcgtgcgacaagtatcgcatttaacctaa-caaagaattctgtaactgggtaactcgcgaggcgatggcctctactcgccatggcga 99  Q
    ||||||||||||||||||||||||  |||||||||||||||| ||||| |||||||||||||| |  ||||||||||| |||||||||||||||||||||    
T  39706159 aactcacatcaactcgtgcgacaaagatcgcatttaacctaaacaaagcattctgtaactgggcagttcgcgaggcgagggcctctactcgccatggcga 39706060  T
Q  100 gttcaggtgtaactcccaaaaatccattcttaaactattccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaa 198  Q
    ||||||||||||||| | ||||| | |||||||||||||||||||||||||| | |||  ||||||| ||||||||||||| | | ||||||||||||||    
T  39706059 gttcaggtgtaactctc-aaaattcgttcttaaactattccaggttcaatcttaatcttcaatctttcctaatcattattagacatgttcaggcactcaa 39705961  T
Q  199 aaacctctaaggtccaacttaaggggcaaaa 229  Q
    |||| |||||||| |||||||| || |||||    
T  39705960 aaacatctaaggttcaacttaaaggtcaaaa 39705930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 1 - 220
Target Start/End: Original strand, 15190566 - 15190787
Alignment:
Q  1 aactcacatcaactcgtgcgacaagtatcgcatttaacctaa-caaagaattctgtaactgggtaactcgcgaggcgatggcctctactcgccatggcga 99  Q
    ||||||||||||||||||||||||  ||||| |||||||||| ||| | ||||||||||||| || ||||||||||||  ||||||||||||||||||||    
T  15190566 aactcacatcaactcgtgcgacaaagatcgcttttaacctaaacaaggcattctgtaactggttagctcgcgaggcgagagcctctactcgccatggcga 15190665  T
Q  100 gttcaggtgtaactcccaaaaatccattcttaaactattccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaa 198  Q
    || ||| |||||| |||||||||||||||||||||||||||||||| ||||||| ||||||| ||||||||||||| |||| | | ||||||||||||||    
T  15190666 gtacagatgtaacgcccaaaaatccattcttaaactattccaggttaaatctcaatctagaaccttttctaatcataattagacatgttcaggcactcaa 15190765  T
Q  199 aaacctctaaggtccaacttaa 220  Q
    |||| |||||||| | ||||||    
T  15190766 aaacatctaaggttcgacttaa 15190787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 1 - 233
Target Start/End: Original strand, 15099599 - 15099833
Alignment:
Q  1 aactcacatcaactcgtgcgacaagtatcgcatttaacctaacaaaga-attctgtaactgggtaactcgcgaggcgatggcctctactcgccatggcga 99  Q
    ||||||||||||||| ||||||||  ||||| ||||||||||  |||| ||||||||||||| || ||||||||||||  ||||||||||||||||||||    
T  15099599 aactcacatcaactcatgcgacaaagatcgcttttaacctaaacaagacattctgtaactggttagctcgcgaggcgagagcctctactcgccatggcga 15099698  T
Q  100 gttcaggtgtaactcccaaaaatccattcttaaactattccaggttcaatctcattctagaatcttttctaatcattat--tacatagttcaggcactca 197  Q
    ||||||||| ||||| ||||||| |||||||||||||||||||||||||||||| |||| ||||||| |||||||| ||  |||| ||||||||||||||    
T  15099699 gttcaggtgcaactcacaaaaattcattcttaaactattccaggttcaatctcaatctacaatctttcctaatcatcatcataca-agttcaggcactca 15099797  T
Q  198 aaaacctctaaggtccaacttaaggggcaaaactac 233  Q
    ||||| |||||||| | |||||| || |||||||||    
T  15099798 aaaacatctaaggttcgacttaaaggtcaaaactac 15099833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 49 - 256
Target Start/End: Complemental strand, 52243016 - 52242811
Alignment:
Q  49 attctgtaactgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactcccaaaaatccattcttaaactattccaggttcaa 148  Q
    |||||||||||||| ||||||||||||||  |||||||||||| |||||||||||||||||||||||||| ||| |||||||||||||||||||||||||    
T  52243016 attctgtaactgggcaactcgcgaggcgagagcctctactcgctatggcgagttcaggtgtaactcccaacaatgcattcttaaactattccaggttcaa 52242917  T
Q  149 tctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaaggtccaacttaaggggcaaaactactacgaaaccatgtc 247  Q
    |||||||||||||||||| || |||||||||| | | |||||||||||| ||| | |||||   ||||||||| |  ||||   ||||||||| |||||     
T  52242916 tctcattctagaatctttcctgatcattattatacatgttcaggcactcgaaatcatctaaataccaacttaaagatcaaa---actacgaaatcatgtt 52242820  T
Q  248 gactctctg 256  Q
    |||||||||    
T  52242819 gactctctg 52242811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 49 - 233
Target Start/End: Complemental strand, 15464752 - 15464567
Alignment:
Q  49 attctgtaactgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactcccaaaaatccattcttaaactattccaggttcaa 148  Q
    |||||||||||||| ||||||||||||||  |||||||||||| |||| ||||||||||||||| ||||||||||||||||||||||||| |||||||||    
T  15464752 attctgtaactgggcaactcgcgaggcgagagcctctactcgctatggtgagttcaggtgtaacacccaaaaatccattcttaaactatttcaggttcaa 15464653  T
Q  149 tctcattctagaatcttttctaatcattat--tacatagttcaggcactcaaaaacctctaaggtccaacttaaggggcaaaactac 233  Q
    ||||| |||| ||||||| |||||||||||  |||||| ||||||||||||||| | |||||    ||||||||||| |||||||||    
T  15464652 tctcaatctaaaatctttcctaatcattattatacata-ttcaggcactcaaaatcatctaaatatcaacttaagggtcaaaactac 15464567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 80 - 233
Target Start/End: Complemental strand, 43198380 - 43198226
Alignment:
Q  80 gcctctactcgccatggcgagttcaggtgtaactcccaaaaatccattcttaaactattccaggttcaatctcattctagaatcttttctaatcattatt 179  Q
    |||||||||||| |||| |||||||||||||||||||||||||| ||||||||||||||||| ||||||||||| |||| ||||||| ||||||||||||    
T  43198380 gcctctactcgctatggtgagttcaggtgtaactcccaaaaatcaattcttaaactattccatgttcaatctcaatctaaaatctttcctaatcattatt 43198281  T
Q  180 acata-gttcaggcactcaaaaacctctaaggtccaacttaaggggcaaaactac 233  Q
    ||| | |||||||||||||||||| ||||||||  |||||||||| |||||||||    
T  43198280 acacatgttcaggcactcaaaaacatctaaggtttaacttaagggtcaaaactac 43198226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 66 - 220
Target Start/End: Original strand, 13844854 - 13845009
Alignment:
Q  66 ctcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactcccaaaaatccattcttaaactattccaggttcaatctcattctagaatctt 165  Q
    ||||||||||||  |||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||| |||||   |||||||||||    
T  13844854 ctcgcgaggcgagagcctctactcgccatggcaagtacaggtgtaactcccaaaaatccattcttaaactattccaggttaaatcttgatctagaatctt 13844953  T
Q  166 ttctaatcattattacata-gttcaggcactcaaaaacctctaaggtccaacttaa 220  Q
    |||||||||| |||| | | |||||| ||||||||||| |||||||| ||||||||    
T  13844954 ttctaatcataattagacatgttcagacactcaaaaacatctaaggttcaacttaa 13845009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 1 - 209
Target Start/End: Original strand, 8846623 - 8846834
Alignment:
Q  1 aactcacatcaactcgtgcgacaagtatcgcatttaacctaacaaaga-attctgtaactgggtaactcgcgaggcgatggcctctactcgccatggcga 99  Q
    ||||||||||||||||||||||||  |||||||||||| |||  |||| ||||||||||| | || ||||||||||||  ||||||||||||||||||||    
T  8846623 aactcacatcaactcgtgcgacaaagatcgcatttaacataaacaagacattctgtaactagttagctcgcgaggcgagagcctctactcgccatggcga 8846722  T
Q  100 gttcaggtgtaactc-ccaaaaatccattcttaaactattccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactca 197  Q
    ||| ||||| ||||| | |||||| |||||| |||   |||||||||||||||||||||  ||||||| ||||||||||||| | | ||||||| |||||    
T  8846723 gttaaggtgcaactcacaaaaaattcattctaaaatctttccaggttcaatctcattctccaatctttcctaatcattattagacatgttcaggtactca 8846822  T
Q  198 aaaacctctaag 209  Q
    ||||| ||||||    
T  8846823 aaaacatctaag 8846834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 49 - 202
Target Start/End: Complemental strand, 44928746 - 44928592
Alignment:
Q  49 attctgtaactgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactcccaaaaatccattcttaaactattccaggttcaa 148  Q
    ||||||||||||||| |||||||||||||  |||||| ||||||||||||||||| |||   | |||||||  | |||||| |||   ||||||||||||    
T  44928746 attctgtaactgggtcactcgcgaggcgagagcctctgctcgccatggcgagttctggtcagattcccaaagtttcattctaaaatctttccaggttcaa 44928647  T
Q  149 tctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaac 202  Q
    |||||||||| | ||||| ||||||||||||| ||| ||||||||||||||||||    
T  44928646 tctcattctacattctttcctaatcattattagatatgttcaggcactcaaaaac 44928592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 210
Target Start/End: Original strand, 12774248 - 12774458
Alignment:
Q  1 aactcacatcaactcgtgcgacaagtatcgcatttaacctaa-caaagaattctgtaactgggtaactcgcgaggcgatggcctctactcgccatggcga 99  Q
    ||||||||||||||||||||||||| |||||||||||||||| ||| | | ||||||||      |||||||||||||  |||||| |||||||||||||    
T  12774248 aactcacatcaactcgtgcgacaaggatcgcatttaacctaaacaaggcagtctgtaacacaagtactcgcgaggcgagagcctctgctcgccatggcga 12774347  T
Q  100 gttcaggtgtaactcccaaaaatccattcttaaactat-tccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactca 197  Q
    ||||||||  |  || ||||| || ||||| ||  | | ||||||||||||||||||||  ||||||||||||||||||||| | | |||||||||||||    
T  12774348 gttcaggttcagttcacaaaattc-attct-aacgtctctccaggttcaatctcattctccaatcttttctaatcattattagacatgttcaggcactca 12774445  T
Q  198 aaaacctctaagg 210  Q
    ||||| |||||||    
T  12774446 aaaacatctaagg 12774458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 116 - 233
Target Start/End: Complemental strand, 15868391 - 15868273
Alignment:
Q  116 caaaaatccattcttaaactattccaggttcaatctcattctagaatcttttctaatcattat--tacatagttcaggcactcaaaaacctctaaggtcc 213  Q
    |||||||| ||| ||||||| | ||||||||||||||| |||| || |||| |||||||||||  |||||| ||||||||||||||| | |||||||| |    
T  15868391 caaaaatctatttttaaactttcccaggttcaatctcaatctaaaaactttcctaatcattattatacata-ttcaggcactcaaaatcatctaaggttc 15868293  T
Q  214 aacttaaggggcaaaactac 233  Q
    |||||||||| |||||||||    
T  15868292 aacttaagggacaaaactac 15868273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 50 - 210
Target Start/End: Complemental strand, 21815124 - 21814964
Alignment:
Q  50 ttctgtaactgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactcccaaaaa-tccattcttaaactattccaggttcaa 148  Q
    |||||||| |||| ||||||||||||||  ||||||||||||||||||||||||| ||  | || ||||||| | ||||||| || || ||||||||||     
T  21815124 ttctgtaattgggcaactcgcgaggcgagagcctctactcgccatggcgagttcaagt-cagcttccaaaaagttcattctt-aattaatccaggttcat 21815027  T
Q  149 tctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaagg 210  Q
    | |||||||| | ||||| ||||||||||||| | | |||||| ||||||||| | |||||||    
T  21815026 tatcattctaaattctttcctaatcattattaaacatgttcagacactcaaaagcatctaagg 21814964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 50 - 210
Target Start/End: Complemental strand, 21815453 - 21815293
Alignment:
Q  50 ttctgtaactgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactcccaaaaa-tccattcttaaactattccaggttcaa 148  Q
    |||||||| |||| ||||||||||||||  ||||||||||||||||||||||||||||  | || ||||||| | ||||||| || || ||||||||||     
T  21815453 ttctgtaattgggcaactcgcgaggcgagagcctctactcgccatggcgagttcaggt-cagcttccaaaaagttcattctt-aattaatccaggttcat 21815356  T
Q  149 tctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaagg 210  Q
    | |||||||| | | ||| ||||||||||||| | | |||||| ||||||||| | |||||||    
T  21815355 tatcattctaaattatttcctaatcattattaaacatgttcagacactcaaaagcatctaagg 21815293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 50 - 210
Target Start/End: Complemental strand, 21818546 - 21818386
Alignment:
Q  50 ttctgtaactgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactcccaaaaa-tccattcttaaactattccaggttcaa 148  Q
    |||||||| |||| ||||||||||||||  ||||||||||||||||||||||||| ||  | || ||||||| | ||||||| || || ||||||||||     
T  21818546 ttctgtaattgggcaactcgcgaggcgagagcctctactcgccatggcgagttcaagt-cagcttccaaaaagttcattctt-aattaatccaggttcat 21818449  T
Q  149 tctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaagg 210  Q
    | |||||||| | ||||| ||||||||||||| | | |||||| ||||||||| | |||||||    
T  21818448 tatcattctaaattctttcctaatcattattaaacatgttcagacactcaaaagcatctaagg 21818386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 116 - 228
Target Start/End: Original strand, 32851816 - 32851929
Alignment:
Q  116 caaaaatccattcttaaactattccaggttcaatctcattctagaatcttttctaatcattat--tacatagttcaggcactcaaaaacctctaaggtcc 213  Q
    |||||||||||| ||||||  | |||||| |||||||| |||| || ||| ||||||||||||  |||||| ||||||||||||||| | |||||||| |    
T  32851816 caaaaatccatttttaaaccttcccaggtccaatctcaatctaaaaacttgtctaatcattattatacata-ttcaggcactcaaaatcatctaaggttc 32851914  T
Q  214 aacttaaggggcaaa 228  Q
    |||||||||| ||||    
T  32851915 aacttaagggacaaa 32851929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 114 - 229
Target Start/End: Complemental strand, 13532 - 13415
Alignment:
Q  114 cccaaaaatccattctt-aaactattccaggttcaatctcattctagaatcttttctaatcattattaca-tagttcaggcactcaaaaacctctaaggt 211  Q
    |||||||||||||| || ||||| | ||||||||||||||| |||| || |||  ||||||||||||| | | |||||||||||||||| | ||||| ||    
T  13532 cccaaaaatccattttttaaactttcccaggttcaatctcaatctaaaaacttgcctaatcattattatacttgttcaggcactcaaaatcatctaaagt 13433  T
Q  212 ccaacttaaggggcaaaa 229  Q
     ||||||||||| |||||    
T  13432 tcaacttaagggtcaaaa 13415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 137 - 211
Target Start/End: Original strand, 16597031 - 16597106
Alignment:
Q  137 ttccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaaggt 211  Q
    |||||||||||||||||||||| | ||||| ||||||||||||| | | |||||||||||||||| | ||||||||    
T  16597031 ttccaggttcaatctcattctacattctttcctaatcattattagacatgttcaggcactcaaaagcatctaaggt 16597106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 136 - 211
Target Start/End: Original strand, 3097017 - 3097093
Alignment:
Q  136 attccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaaggt 211  Q
    ||||||||||||||||||| ||| | ||||| ||||||||||||| | | |||||||||||| ||||| ||||||||    
T  3097017 attccaggttcaatctcatcctacattctttcctaatcattattagacatgttcaggcactcgaaaacatctaaggt 3097093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 58 - 180
Target Start/End: Original strand, 15091203 - 15091326
Alignment:
Q  58 ctgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactcccaaaa-atccattcttaaactattccaggttcaatctcattc 156  Q
    |||||| |||||||||||||  |||||| |||||| ||||||||||||||   | | ||||||  | |||||| |||   ||||||||||||||||||||    
T  15091203 ctgggtcactcgcgaggcgagagcctctgctcgccgtggcgagttcaggtcagatttccaaaagtttcattctaaaatccttccaggttcaatctcattc 15091302  T
Q  157 tagaatcttttctaatcattatta 180  Q
    || | ||||| ||||||| |||||    
T  15091303 tacattctttcctaatcaatatta 15091326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 114 - 180
Target Start/End: Complemental strand, 12287891 - 12287825
Alignment:
Q  114 cccaaaaatccattcttaaactattccaggttcaatctcattctagaatcttttctaatcattatta 180  Q
    |||||||||||||| ||||||| | ||||||||||||||| |||| || |||  |||||||||||||    
T  12287891 cccaaaaatccatttttaaactttcccaggttcaatctcaatctaaaaacttgcctaatcattatta 12287825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 58 - 210
Target Start/End: Original strand, 14038955 - 14039109
Alignment:
Q  58 ctgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactcccaaaaatc-cattcttaaactattccaggttcaatctcattc 156  Q
    |||||| |||||||||||||  |||||| |||||| |||||||||| |||   | | |||||| |  |||||| |||   ||| ||||||||||||||||    
T  14038955 ctgggtcactcgcgaggcgagagcctctgctcgccgtggcgagttctggtcagatttccaaaagtttcattctaaaatctttctaggttcaatctcattc 14039054  T
Q  157 tagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaagg 210  Q
    || | ||||| | ||||||||||| | | |||||||||||||||| | |||||||    
T  14039055 tacattctttccaaatcattattagacatgttcaggcactcaaaagcatctaagg 14039109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 49 - 107
Target Start/End: Original strand, 44102508 - 44102566
Alignment:
Q  49 attctgtaactgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggt 107  Q
    ||||||||| | ||| |||||||||||||  |||||| |||||||||||||||||||||    
T  44102508 attctgtaaataggtcactcgcgaggcgagagcctctgctcgccatggcgagttcaggt 44102566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 115 - 180
Target Start/End: Complemental strand, 53081854 - 53081789
Alignment:
Q  115 ccaaaaatccattcttaaactattccaggttcaatctcattctagaatcttttctaatcattatta 180  Q
    ||||||||||||| ||||||| ||||||||||||||||| |||| || |||   ||||||||||||    
T  53081854 ccaaaaatccatttttaaacttttccaggttcaatctcaatctaaaaacttgcttaatcattatta 53081789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 65 - 105
Target Start/End: Complemental strand, 13656 - 13616
Alignment:
Q  65 actcgcgaggcgatggcctctactcgccatggcgagttcag 105  Q
    ||||||||||||| ||||||||||||| |||||||||||||    
T  13656 actcgcgaggcgagggcctctactcgctatggcgagttcag 13616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 136 - 199
Target Start/End: Original strand, 12903131 - 12903195
Alignment:
Q  136 attccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaa 199  Q
    ||||||||||||||||||| ||| | ||||| ||||||||||||| | | |||||||||||||||    
T  12903131 attccaggttcaatctcatcctacattctttcctaatcattattagacatgttcaggcactcaaa 12903195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 136 - 217
Target Start/End: Complemental strand, 14053049 - 14052967
Alignment:
Q  136 attccaggttcaatctcattctagaatcttttctaatcattatt--acatagttcaggcactcaaaaacctctaaggtccaact 217  Q
    |||||| |||||||||||| ||| | ||||| ||||||||||||  ||||| ||||||||||||||| | |||||||| |||||    
T  14053049 attccaagttcaatctcatcctacattctttcctaatcattattagacata-ttcaggcactcaaaagcatctaaggttcaact 14052967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 43198425 - 43198381
Alignment:
Q  1 aactcacatcaactcgtgcgacaagtatcgcatttaacctaacaa 45  Q
    |||||||||||||||||| |||||  |||||||||||||||||||    
T  43198425 aactcacatcaactcgtgtgacaaagatcgcatttaacctaacaa 43198381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 53082020 - 53081976
Alignment:
Q  1 aactcacatcaactcgtgcgacaagtatcgcatttaacctaacaa 45  Q
    |||||||||||||||||||||||| | || |||||||||||||||    
T  53082020 aactcacatcaactcgtgcgacaaatgtcacatttaacctaacaa 53081976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 60 - 107
Target Start/End: Original strand, 7089185 - 7089232
Alignment:
Q  60 gggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggt 107  Q
    |||| |||||||||||||  |||||| |||||||||||||||||||||    
T  7089185 gggtcactcgcgaggcgagagcctctgctcgccatggcgagttcaggt 7089232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 137 - 210
Target Start/End: Complemental strand, 16239728 - 16239653
Alignment:
Q  137 ttccaggttcaatctcattctaga-atcttttctaatcattattacata-gttcaggcactcaaaaacctctaagg 210  Q
    |||||||||||||||||||||| |  ||||| ||||||||||||| | | |||||||||||||||| | |||||||    
T  16239728 ttccaggttcaatctcattctacatttctttcctaatcattattagacatgttcaggcactcaaaagcatctaagg 16239653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 60 - 107
Target Start/End: Complemental strand, 17047885 - 17047838
Alignment:
Q  60 gggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggt 107  Q
    |||| |||||||||||||  |||||| |||||||||||||||||||||    
T  17047885 gggtcactcgcgaggcgagagcctctgctcgccatggcgagttcaggt 17047838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 137 - 210
Target Start/End: Original strand, 6190819 - 6190893
Alignment:
Q  137 ttccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaagg 210  Q
    |||||||||||||||||| ||| | ||| | ||||||||||||| | | |||||||||||||||| | |||||||    
T  6190819 ttccaggttcaatctcatcctacattctctcctaatcattattaaacatgttcaggcactcaaaagcatctaagg 6190893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 136 - 197
Target Start/End: Original strand, 7089251 - 7089313
Alignment:
Q  136 attccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactca 197  Q
    ||||||||||||||||||| ||| | ||||| ||||||||||||| | | |||||||||||||    
T  7089251 attccaggttcaatctcatcctacattctttcctaatcattattagacatgttcaggcactca 7089313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 46640326 - 46640272
Alignment:
Q  1 aactcacatcaactcgtgcgacaagtatcgcatttaacctaacaaagaattctgt 55  Q
    ||||||||||||||||||||||||   || ||||||||||||||| | |||||||    
T  46640326 aactcacatcaactcgtgcgacaaaggtcacatttaacctaacaaggtattctgt 46640272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 58 - 107
Target Start/End: Original strand, 3096949 - 3096998
Alignment:
Q  58 ctgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggt 107  Q
    |||||| |||||||||||||  |||||| |||||| ||||||||||||||    
T  3096949 ctgggtcactcgcgaggcgagagcctctgctcgccttggcgagttcaggt 3096998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 58 - 107
Target Start/End: Original strand, 7799003 - 7799052
Alignment:
Q  58 ctgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggt 107  Q
    |||||| |||||||||||||  |||||| |||||| ||||||||||||||    
T  7799003 ctgggtcactcgcgaggcgagagcctctgctcgccgtggcgagttcaggt 7799052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 58 - 107
Target Start/End: Original strand, 12903063 - 12903112
Alignment:
Q  58 ctgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggt 107  Q
    |||||| ||||||||||||   ||||||||||||| ||||||||||||||    
T  12903063 ctgggtcactcgcgaggcgggagcctctactcgccgtggcgagttcaggt 12903112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 137 - 217
Target Start/End: Original strand, 15552199 - 15552280
Alignment:
Q  137 ttccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaaggtccaact 217  Q
    |||||||| ||||||||| ||| | ||||| ||||||||||||| | | |||||||||||||||| | | |||||| |||||    
T  15552199 ttccaggtccaatctcatcctacattctttcctaatcattattagacatgttcaggcactcaaaagcatataaggttcaact 15552280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 137 - 217
Target Start/End: Original strand, 24029127 - 24029208
Alignment:
Q  137 ttccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaaggtccaact 217  Q
    |||||||||||||||||| ||| | |||||  |||||| ||||| | | ||||||||||||||| || |||||||| |||||    
T  24029127 ttccaggttcaatctcatcctacattctttcataatcaatattagacatgttcaggcactcaaagacatctaaggttcaact 24029208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0138 (Bit Score: 122; Significance: 1e-62; HSPs: 2)
Name: scaffold0138
Description:

Target: scaffold0138; HSP #1
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 1 - 217
Target Start/End: Original strand, 13190 - 13407
Alignment:
Q  1 aactcacatcaactcgtgcgacaagtatcgcatttaacctaacaaagaattctgtaactgggtaactcgcgaggcgatggcctctactcgccatggcgag 100  Q
    |||||||||||||||||| |||||  ||| ||||||||||||||| | ||||||||||||| || |||||||||||| ||||||||||||||||||||||    
T  13190 aactcacatcaactcgtgtgacaaagatcacatttaacctaacaaggcattctgtaactggttagctcgcgaggcgagggcctctactcgccatggcgag 13289  T
Q  101 ttcaggtgtaactcccaaaaatccattcttaaactattccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaa 199  Q
    |||||||| ||||| ||||||| |||||||||||||||||||||||||||| | |||  ||||||| |||||||| |||| | | |||||||||||||||    
T  13290 ttcaggtgcaactcacaaaaattcattcttaaactattccaggttcaatcttaatctccaatctttcctaatcataattagacatgttcaggcactcaaa 13389  T
Q  200 aacctctaaggtccaact 217  Q
    ||| |||||||| |||||    
T  13390 aacatctaaggttcaact 13407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0138; HSP #2
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 3 - 106
Target Start/End: Complemental strand, 18105 - 18002
Alignment:
Q  3 ctcacatcaactcgtgcgacaagtatcgcatttaacctaacaaagaattctg--taactgggtaactcgcgaggcgatggcctctactcgccatggcgag 100  Q
    ||||||||||||||||||||||   || ||||||||||||||| | ||||||  | ||| ||   ||||||||||||  ||||| |||||| ||||||||    
T  18105 ctcacatcaactcgtgcgacaaaggtcacatttaacctaacaaggtattctgtctcactagg--gctcgcgaggcgagagcctccactcgctatggcgag 18008  T
Q  101 ttcagg 106  Q
    ||||||    
T  18007 ttcagg 18002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 122; Significance: 1e-62; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 1 - 220
Target Start/End: Complemental strand, 15702 - 15481
Alignment:
Q  1 aactcacatcaactcgtgcgacaagtatcgcatttaacctaa-caaagaattctgtaactgggtaactcgcgaggcgatggcctctactcgccatggcga 99  Q
    ||||||||||||||||||||||||  ||| |||||||| ||| ||| | ||||||||||||| || |||||||||||| |||||||||||||||||||||    
T  15702 aactcacatcaactcgtgcgacaaagatcacatttaacataaacaaggcattctgtaactggttagctcgcgaggcgagggcctctactcgccatggcga 15603  T
Q  100 gttcaggtgtaactcccaaaaatccattcttaaactattccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaa 198  Q
    ||||| |||||| ||| ||||||||||||||||||||||||||||||||||||| |||| ||||||| |||||||| |||| | | ||| ||||||||||    
T  15602 gttcatgtgtaattccgaaaaatccattcttaaactattccaggttcaatctcaatctataatctttcctaatcatcattatacatgtttaggcactcaa 15503  T
Q  199 aaacctctaaggtccaacttaa 220  Q
    |||| |||||||| ||||||||    
T  15502 aaacatctaaggttcaacttaa 15481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010 (Bit Score: 112; Significance: 1e-56; HSPs: 3)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 1 - 202
Target Start/End: Original strand, 130156 - 130359
Alignment:
Q  1 aactcacatcaactcgtgcgacaagtatcgcatttaacctaa-caaagaattctgtaactgggtaactcgcgaggcgatggcctctactcgccatggcga 99  Q
    ||||||||||||||||||||||||  |||||||||| ||||| ||| | ||| ||||||| | || ||||||||||||  |||||| |||||||||||||    
T  130156 aactcacatcaactcgtgcgacaaagatcgcatttatcctaaacaaggcattttgtaactagttagctcgcgaggcgagagcctctgctcgccatggcga 130255  T
Q  100 gttcaggtgtaactcccaaaaatccattcttaaactattccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaa 198  Q
    ||| |||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| | || | | ||||||||||||||    
T  130256 gtttaggtgtaattcccaaaaatccattcttaaactattccaggttcaatctcaatctagaatcttttctaatcataactagacatgttcaggcactcaa 130355  T
Q  199 aaac 202  Q
    ||||    
T  130356 aaac 130359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010; HSP #2
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 49 - 106
Target Start/End: Complemental strand, 60536 - 60479
Alignment:
Q  49 attctgtaactgggtaactcgcgaggcgatggcctctactcgccatggcgagttcagg 106  Q
    |||||||||||||| ||||||||||||||  |||||||||||| ||||||||||||||    
T  60536 attctgtaactgggaaactcgcgaggcgagagcctctactcgctatggcgagttcagg 60479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010; HSP #3
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 114 - 197
Target Start/End: Complemental strand, 60396 - 60312
Alignment:
Q  114 cccaaaaatccattcttaaactattccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactca 197  Q
    |||||||||||||| ||||||| | ||| ||||||||||| |||| || |||  ||||||||||||| | | |||||||||||||    
T  60396 cccaaaaatccatttttaaactttcccatgttcaatctcaatctaaaaacttgcctaatcattattatacatgttcaggcactca 60312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 111; Significance: 4e-56; HSPs: 50)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 53 - 233
Target Start/End: Complemental strand, 2051018 - 2050839
Alignment:
Q  53 tgtaactgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactcccaaaaatccattcttaaactattccaggttcaatctc 152  Q
    |||||||||| ||||| ||||||||  |||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||  |||||||||||    
T  2051018 tgtaactgggcaactcacgaggcgagagcctctactcgctatggagagttcaggtgtaactcccaaaaatccattcttaaactattc--ggttcaatctc 2050921  T
Q  153 attctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaaggtccaacttaaggggcaaaactac 233  Q
    | |||||||||||| ||||||||||||||| | ||| |||||||||||||| |||||||| ||||||||||| |||||||||    
T  2050920 aatctagaatctttcctaatcattattacacatgttgaggcactcaaaaacatctaaggttcaacttaagggtcaaaactac 2050839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 1 - 221
Target Start/End: Original strand, 324485 - 324706
Alignment:
Q  1 aactcacatcaactcgtgcgacaagtatcgcatttaacctaacaaagaattctgtaactgggtaactcgcgaggcgatggcctctactcgccatggcgag 100  Q
    |||||||||||||| || ||||||   || ||||||||||||||| |  |||||||||| |||||||||||||||||  |||||||||||| ||||||||    
T  324485 aactcacatcaacttgtacgacaaaggtcacatttaacctaacaaggtgttctgtaacttggtaactcgcgaggcgagagcctctactcgctatggcgag 324584  T
Q  101 ttcaggtgtaactcccaaaaatccattcttaaactattccaggttcaatctcattctagaatcttttctaatcattat--tacatagttcaggcactcaa 198  Q
    |||||||| ||||||||||||| ||||||||||||||||   |||||||||||||||| ||||||| |||||||||||  |||||| |||||||||||||    
T  324585 ttcaggtgcaactcccaaaaattcattcttaaactattctcagttcaatctcattctacaatctttcctaatcattattatacata-ttcaggcactcaa 324683  T
Q  199 aaacctctaaggtccaacttaag 221  Q
    || | ||||| || |||||||||    
T  324684 aatcatctaaagttcaacttaag 324706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 49 - 256
Target Start/End: Complemental strand, 52523550 - 52523345
Alignment:
Q  49 attctgtaactgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactcccaaaaatccattcttaaactattccaggttcaa 148  Q
    |||||||||||||| ||||||  |||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  52523550 attctgtaactgggcaactcgtcaggcgagggcctctactcgctatggcgagttcaggtgtaactcccaaaaatccattcttaaactgttccaggttcaa 52523451  T
Q  149 tctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaaggtccaacttaaggggcaaaactactacgaaaccatgtc 247  Q
    | |||  ||||||||||| ||||| ||||||||| | |||||||||||||||| | |||||   |||||||||||  ||||   ||||||||| |||||     
T  52523450 tatcaaactagaatctttcctaataattattacacatgttcaggcactcaaaatcatctaaataccaacttaaggaccaaa---actacgaaatcatgtt 52523354  T
Q  248 gactctctg 256  Q
    |||||||||    
T  52523353 gactctctg 52523345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 6 - 217
Target Start/End: Original strand, 15471179 - 15471391
Alignment:
Q  6 acatcaactcgtgcgacaagtatcgcatttaacctaa-caaagaattctgtaactgggtaactcgcgaggcgatggcctctactcgccatggcgagttca 104  Q
    |||||||||||||||||||  |||||||||||||||| ||||| |||||||||||||| |  || |||||||| ||||||||||||||||||||||||||    
T  15471179 acatcaactcgtgcgacaaagatcgcatttaacctaaacaaagcattctgtaactgggcagttcacgaggcgagggcctctactcgccatggcgagttca 15471278  T
Q  105 ggtgtaactcccaaaaatccattcttaaactattccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacc 203  Q
    |||||||||| | ||||| | |||||||||||||||||||||||||| | |||  ||||||| |||||||| |||| | | ||||||| ||||||||||     
T  15471279 ggtgtaactctc-aaaattcgttcttaaactattccaggttcaatcttaatctccaatctttcctaatcatcattatacatgttcagggactcaaaaaca 15471377  T
Q  204 tctaaggtccaact 217  Q
    |||||||| |||||    
T  15471378 tctaaggttcaact 15471391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 1 - 229
Target Start/End: Original strand, 14234740 - 14234969
Alignment:
Q  1 aactcacatcaactcgtgcgacaagtatcgcatttaacctaa-caaagaattctgtaactgggtaactcgcgaggcgatggcctctactcgccatggcga 99  Q
    |||| ||||||||| || ||||||  ||| |||||||||||| ||| | ||||||||||||| || || ||||||||| |||||||||||||||||||||    
T  14234740 aactaacatcaacttgttcgacaaagatcacatttaacctaaacaaggcattctgtaactggttagcttgcgaggcgagggcctctactcgccatggcga 14234839  T
Q  100 gttcaggtgtaactcccaaaaatccattcttaaactattccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaa 198  Q
    ||||||||| ||||||||||||| ||||||| ||||||| | |||||||||||| |||| ||||||| |||||||| |||| | | ||||||||||||||    
T  14234840 gttcaggtgcaactcccaaaaattcattctt-aactatttcgggttcaatctcaatctataatctttcctaatcatcattatacatgttcaggcactcaa 14234938  T
Q  199 aaacctctaaggtccaacttaaggggcaaaa 229  Q
    |||  |||||||| |||||||| || |||||    
T  14234939 aaaaatctaaggttcaacttaaaggtcaaaa 14234969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 1 - 233
Target Start/End: Complemental strand, 1465281 - 1465047
Alignment:
Q  1 aactcacatcaactcgtgcgacaagtatcgcatttaacctaa-caaagaattctgtaactgggtaactcgcgaggcgatggcctctactcgccatggcga 99  Q
    ||||||||||||||||||||||||  ||  | |||||||||| ||| | ||||||||||||| || ||||||||||||  |||||||||||||||||| |    
T  1465281 aactcacatcaactcgtgcgacaaagattacttttaacctaaacaaggcattctgtaactggttagctcgcgaggcgagagcctctactcgccatggcaa 1465182  T
Q  100 gttcaggtgtaactcccaaaaatccattcttaaactattccaggttcaatctcattctagaatcttttctaatcattat--tacatagttcaggcactca 197  Q
    ||||||||| ||||| || |||| | |||||||| ||||||||||||||||||| |||| |||||||  ||||||| ||  |||| ||||||||||||||    
T  1465181 gttcaggtgcaactcacacaaattcgttcttaaattattccaggttcaatctcaatctacaatctttcataatcatcatcataca-agttcaggcactca 1465083  T
Q  198 aaaacctctaaggtccaacttaaggggcaaaactac 233  Q
    ||||| |||||||| | |||||| || |||||||||    
T  1465082 aaaacatctaaggttcgacttaaaggtcaaaactac 1465047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 1 - 210
Target Start/End: Complemental strand, 12934182 - 12933971
Alignment:
Q  1 aactcacatcaactcgtgcgacaagtatcgcatttaacctaa-caaagaattctgtaactgggtaactcgcgaggcgatggcctctactcgccatggcga 99  Q
    ||||||||||||||||||||||||  |||||||||||||||| ||| ||| ||||||||      |||||||||||||  | |||| |||||||||||||    
T  12934182 aactcacatcaactcgtgcgacaaagatcgcatttaacctaaacaaggaagtctgtaacacaagtactcgcgaggcgagagtctctgctcgccatggcga 12934083  T
Q  100 gttcaggtgtaactcccaaaaatccattcttaaactattccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaa 198  Q
    ||||||||  |  || ||||| | |||||| |||   |||||||||||||||||||||  ||||||| ||||||||||||| | | ||||||||||||||    
T  12934082 gttcaggttcagttcacaaaatttcattctaaaatctttccaggttcaatctcattctctaatctttcctaatcattattagacatgttcaggcactcaa 12933983  T
Q  199 aaacctctaagg 210  Q
    |||| |||||||    
T  12933982 aaacatctaagg 12933971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 1 - 202
Target Start/End: Original strand, 16097579 - 16097782
Alignment:
Q  1 aactcacatcaactcgtgcgacaagtatcgcatttaacctaacaaaga-attctgtaactgggtaactcgcgaggcgatggcctctactcgccatggcga 99  Q
    ||||||||||||||||||||||||  |||||||||||| |||  |||| ||| ||||||| | || ||||||||||||  |||||||||| |||||||||    
T  16097579 aactcacatcaactcgtgcgacaaagatcgcatttaacataaacaagacattttgtaactagttagctcgcgaggcgagagcctctactcaccatggcga 16097678  T
Q  100 gttcaggtgtaactcccaaaaatccattcttaaactattccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaa 198  Q
    ||||||||  || || ||||||| |||||| |||   || ||||||||||||||||||  ||||||| ||||| ||||||| | | |||||| |||||||    
T  16097679 gttcaggtccaattcacaaaaattcattctaaaatcttttcaggttcaatctcattctccaatctttcctaataattattagacatgttcagacactcaa 16097778  T
Q  199 aaac 202  Q
    ||||    
T  16097779 aaac 16097782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 49 - 210
Target Start/End: Complemental strand, 17248109 - 17247947
Alignment:
Q  49 attctgtaactgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactcccaaaaatccattcttaaactattccaggttcaa 148  Q
    ||||||||||||||| |||||||||||||  |||||| |||||||||||||||||||||   | |||||||  | |||||| |||   ||||||||||||    
T  17248109 attctgtaactgggtcactcgcgaggcgagagcctctgctcgccatggcgagttcaggtcagattcccaaagtttcattctaaaatctttccaggttcaa 17248010  T
Q  149 tctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaagg 210  Q
    |||||||||| | ||||| ||||||||||||| | | |||||||||||||||||| |||||||    
T  17248009 tctcattctacattctttcctaatcattattagacatgttcaggcactcaaaaacatctaagg 17247947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 210
Target Start/End: Original strand, 32307918 - 32308128
Alignment:
Q  1 aactcacatcaactcgtgcgacaagtatcgcatttaacctaa-caaagaattctgtaactgggtaactcgcgaggcgatggcctctactcgccatggcga 99  Q
    ||||||||||||||||||||||||  |||||||||||||||| ||| | ||| ||||||      |||||||||||||  |||||| |||||||||||||    
T  32307918 aactcacatcaactcgtgcgacaaagatcgcatttaacctaaacaaggcattatgtaacacaagtactcgcgaggcgagagcctctgctcgccatggcga 32308017  T
Q  100 gttcaggtgtaactcccaaaaatccattcttaaactattcc-aggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactca 197  Q
    ||||||||  |  |||||||| || ||||| ||| | |||| |||||||||||||||||  ||||||| ||||||||||||| ||| |||||||||||||    
T  32308018 gttcaggttcagttcccaaaattc-attct-aaagtcttcctaggttcaatctcattctccaatctttcctaatcattattagatatgttcaggcactca 32308115  T
Q  198 aaaacctctaagg 210  Q
    ||| | |||||||    
T  32308116 aaagcatctaagg 32308128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 50 - 233
Target Start/End: Original strand, 42386710 - 42386894
Alignment:
Q  50 ttctgtaactgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactcccaaaa-atccattcttaaactattccaggttcaa 148  Q
    |||||||| |||| ||||||||||| ||  |||||||||||||||||||||||||||| ||||||||||||  | ||||||| ||||||| |||||||||    
T  42386710 ttctgtaattgggcaactcgcgaggtgagagcctctactcgccatggcgagttcaggtataactcccaaaagtttcattctt-aactatttcaggttcaa 42386808  T
Q  149 tctcattctagaatcttttctaatcattatta--catagttcaggcactcaaaaacctctaaggtccaacttaaggggcaaaactac 233  Q
    || || |||| | ||||  |||||||||||||  ||| ||||| ||||||| ||||  ||||||| |||||||| || |||||||||    
T  42386809 tcacagtctaaagtcttgcctaatcattattatgcat-gttcatgcactcataaacaactaaggttcaacttaaaggtcaaaactac 42386894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 50 - 210
Target Start/End: Complemental strand, 53070520 - 53070360
Alignment:
Q  50 ttctgtaactgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactcccaaaaa-tccattcttaaactattccaggttcaa 148  Q
    |||||||| |||| ||||||||||||||  ||||||||||||||||||||||||||||  | || ||||||| | ||||||| || || |||||||||||    
T  53070520 ttctgtaattgggcaactcgcgaggcgagagcctctactcgccatggcgagttcaggt-cagcttccaaaaagttcattctt-aattaatccaggttcaa 53070423  T
Q  149 tctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaagg 210  Q
    |||||||||| | ||||| ||||||||||||| | | |||||||||||||||| | |||||||    
T  53070422 tctcattctacattctttcctaatcattattaaacatgttcaggcactcaaaagcatctaagg 53070360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 106
Target Start/End: Complemental strand, 37251037 - 37250932
Alignment:
Q  1 aactcacatcaactcgtgcgacaagtatcgcatttaacctaacaaagaattctgtaactgggtaactcgcgaggcgatggcctctactcgccatggcgag 100  Q
    ||||||||||||||||||||||||   || | ||||||||||||| |  ||||||||||||| ||||||||||||||  |||||||||||| ||||||||    
T  37251037 aactcacatcaactcgtgcgacaaaggtcacttttaacctaacaaggtgttctgtaactgggcaactcgcgaggcgagagcctctactcgctatggcgag 37250938  T
Q  101 ttcagg 106  Q
    ||||||    
T  37250937 ttcagg 37250932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 12171976 - 12171869
Alignment:
Q  1 aactcacatcaactcgtgcgacaagtatcgcatttaacct-aacaaagaattctgtaactgggtaactcgcgaggcgatggcctctactcgccatggcga 99  Q
    |||||||||||||| |||||||||| |||||||||||||| ||||| | ||||||||||| | ||  |||||||||||  |||||||||||||||||| |    
T  12171976 aactcacatcaacttgtgcgacaagaatcgcatttaacctaaacaaggcattctgtaactagttagatcgcgaggcgagagcctctactcgccatggcca 12171877  T
Q  100 gttcaggt 107  Q
    ||||||||    
T  12171876 gttcaggt 12171869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 200
Target Start/End: Complemental strand, 49667955 - 49667754
Alignment:
Q  1 aactcacatcaactcgtgcgacaagtatcgcatttaacctaa-caaagaattctgtaactgggtaactcgcgaggcgatggcctctactcgccatggcga 99  Q
    ||||||||||||||||||||||||  |||| ||||||||||| ||| | | ||||||||      |||||||||||||  |||||| |||||||||||||    
T  49667955 aactcacatcaactcgtgcgacaaagatcgtatttaacctaaacaaggcagtctgtaacacaagtactcgcgaggcgagagcctctgctcgccatggcga 49667856  T
Q  100 gttcaggtgtaactcccaaaaatccattcttaaactattccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaa 198  Q
    ||||||||  |  || ||| | | |||||| |||   |||||||||||||||||||||  ||||||| ||||||||||||| | | |||||||| |||||    
T  49667855 gttcaggttcagttcacaatatttcattctaaaatctttccaggttcaatctcattctctaatctttcctaatcattattagacatgttcaggcgctcaa 49667756  T
Q  199 aa 200  Q
    ||    
T  49667755 aa 49667754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 114 - 221
Target Start/End: Complemental strand, 606049 - 605941
Alignment:
Q  114 cccaaaaatccattcttaaactattccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaaggtc 212  Q
    |||||||||||||| ||||||| ||||||||||||||||| |||||||  ||  ||||||||||||| | |  ||||||||||||||| | ||||||||     
T  606049 cccaaaaatccatttttaaacttttccaggttcaatctcaatctagaaaattgcctaatcattattatacacattcaggcactcaaaatcatctaaggtt 605950  T
Q  213 caacttaag 221  Q
    |||||||||    
T  605949 caacttaag 605941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 202
Target Start/End: Complemental strand, 1644554 - 1644352
Alignment:
Q  1 aactcacatcaactcgtgcgacaagtatcgcatttaacct-aacaaagaattctgtaactgggtaactcgcgaggcgatggcctctactcgccatggcga 99  Q
    ||||||||||||||||||||||||| |||||||||||| | ||||| | | | ||||||      |||||||||||||  |||||| |||||||||||||    
T  1644554 aactcacatcaactcgtgcgacaaggatcgcatttaacttaaacaaggcagtttgtaacacaagtactcgcgaggcgagagcctctgctcgccatggcga 1644455  T
Q  100 gttcaggtgtaactcccaaaaatccattcttaaactattc-caggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactca 197  Q
    |||||||| | | | |  ||||| ||||| |||| | ||| ||||||||||||||||||  ||||||| ||||||||||| | | | |||||||||||||    
T  1644454 gttcaggt-tcagttcacaaaattcattc-taaagtcttctcaggttcaatctcattctctaatctttcctaatcattatcagacatgttcaggcactca 1644357  T
Q  198 aaaac 202  Q
    |||||    
T  1644356 aaaac 1644352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 58 - 200
Target Start/End: Complemental strand, 40213535 - 40213392
Alignment:
Q  58 ctgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactcccaaaaatccattcttaaactattccaggttcaatctcattct 157  Q
    |||||| |||||||||||||  |||||| |||||| ||||||||||||||   | |||||||| | ||||||  ||   |||||||||||||||||| ||    
T  40213535 ctgggtcactcgcgaggcgagagcctctgctcgccgtggcgagttcaggttagattcccaaaagttcattctacaatctttccaggttcaatctcatcct 40213436  T
Q  158 agaatcttttctaatcattattacata-gttcaggcactcaaaa 200  Q
    | | ||||| ||||||||||||| | | ||||||||||||||||    
T  40213435 acattctttcctaatcattattagacatgttcaggcactcaaaa 40213392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 210
Target Start/End: Original strand, 9513158 - 9513370
Alignment:
Q  1 aactcacatcaactcgtgcgacaagtatcgcatttaacctaa-caaagaattctgtaactgg-gtaactcgcgaggcgatggcctctactcgccatggcg 98  Q
    ||||||||| |||| |||||||||  |||||||||||| ||| ||| | ||||||||||    |||| || ||||||||  |||||| |||||||||| |    
T  9513158 aactcacataaacttgtgcgacaaagatcgcatttaacataagcaaggcattctgtaacacaagtaa-tctcgaggcgagagcctctgctcgccatggtg 9513256  T
Q  99 agttcaggtgtaactcccaaaaatc-cattcttaaactattccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactc 196  Q
    ||||||||| ||  || |||||||  |||||| |||   || ||||||||||||||||||  ||||||| ||||||||||||| | | ||||||||||||    
T  9513257 agttcaggtttagttcacaaaaatttcattctaaaatcttttcaggttcaatctcattctctaatctttcctaatcattattagacatgttcaggcactc 9513356  T
Q  197 aaaaacctctaagg 210  Q
    |||| | |||||||    
T  9513357 aaaagcatctaagg 9513370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 210
Target Start/End: Original strand, 9521133 - 9521345
Alignment:
Q  1 aactcacatcaactcgtgcgacaagtatcgcatttaacctaa-caaagaattctgtaactgg-gtaactcgcgaggcgatggcctctactcgccatggcg 98  Q
    ||||||||| |||| |||||||||  |||||||||||| ||| ||| | ||||||||||    |||| || ||||||||  |||||| |||||||||| |    
T  9521133 aactcacataaacttgtgcgacaaagatcgcatttaacataagcaaggcattctgtaacacaagtaa-tctcgaggcgagagcctctgctcgccatggtg 9521231  T
Q  99 agttcaggtgtaactcccaaaaatc-cattcttaaactattccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactc 196  Q
    ||||||||| ||  || |||||||  |||||| |||   || ||||||||||||||||||  ||||||| ||||||||||||| | | ||||||||||||    
T  9521232 agttcaggtttagttcacaaaaatttcattctaaaatcttttcaggttcaatctcattctctaatctttcctaatcattattagacatgttcaggcactc 9521331  T
Q  197 aaaaacctctaagg 210  Q
    |||| | |||||||    
T  9521332 aaaagcatctaagg 9521345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 36 - 199
Target Start/End: Original strand, 14572873 - 14573037
Alignment:
Q  36 aacctaacaaagaattctgtaactgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactcccaaa-aatccattcttaaac 134  Q
    |||||||||| | | |||||  || ||| |||||||||||||  ||||||||||||||||||||||||||||   | | |||||   | |||||| |  |    
T  14572873 aacctaacaaggtactctgtttctaggtcactcgcgaggcgagagcctctactcgccatggcgagttcaggtcagatttccaaaggtttcattctaagtc 14572972  T
Q  135 tattccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaa 199  Q
    | |||||||||||||||||||||| | ||||| ||||||||||||| | | |||||||||||||||    
T  14572973 t-ttccaggttcaatctcattctacattctttcctaatcattattagacatgttcaggcactcaaa 14573037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 116 - 222
Target Start/End: Original strand, 23275106 - 23275213
Alignment:
Q  116 caaaaatccattcttaaactattccaggttcaatctcattctagaatcttttctaatcattat--tacatagttcaggcactcaaaaacctctaaggtcc 213  Q
    |||||||||||| ||||||| | ||| ||||||||||| |||| || |||  |||||||||||  |||||| ||||||||||||||| | |||||||| |    
T  23275106 caaaaatccatttttaaactttcccaagttcaatctcaatctaaaaacttgcctaatcattattatacata-ttcaggcactcaaaatcatctaaggttc 23275204  T
Q  214 aacttaagg 222  Q
    |||||||||    
T  23275205 aacttaagg 23275213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 116 - 230
Target Start/End: Complemental strand, 23412929 - 23412814
Alignment:
Q  116 caaaaatccattcttaaactattccaggttcaatctcattctagaatcttttctaatcattatta--catagttcaggcactcaaaaacctctaaggtcc 213  Q
    |||||||||||| ||||||| | |||||| |||||||| |||| || |||  ||||||||| |||  |||| ||||||||||||||| | |||||||| |    
T  23412929 caaaaatccatttttaaactttcccaggtccaatctcaatctaaaaacttgcctaatcatttttatacata-ttcaggcactcaaaatcatctaaggttc 23412831  T
Q  214 aacttaaggggcaaaac 230  Q
    |||||||||| ||||||    
T  23412830 aacttaagggacaaaac 23412814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 58 - 210
Target Start/End: Complemental strand, 25476199 - 25476046
Alignment:
Q  58 ctgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactcccaaaaatccattcttaaactattccaggttcaatctcattct 157  Q
    |||||| |||||||||||||  ||||||||||| | ||||||||||||||   | ||| |||  | |||||| |||   |||||||||| ||||||||||    
T  25476199 ctgggtcactcgcgaggcgagagcctctactcgtcgtggcgagttcaggtcagattccaaaagtttcattctaaaatctttccaggttcgatctcattct 25476100  T
Q  158 agaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaagg 210  Q
    | | |||||  |||||||||||| | | ||||||| |||||||||| |||||||    
T  25476099 acattctttcataatcattattagacatgttcaggtactcaaaaacatctaagg 25476046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 114 - 222
Target Start/End: Original strand, 43927543 - 43927652
Alignment:
Q  114 cccaaaaatccattcttaaactattccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaaggtc 212  Q
    |||||||||||||| ||||||| | |||||||||| |||| |||| || ||| |||||||||||||| | | |||||||||||||||| | ||||| ||     
T  43927543 cccaaaaatccatttttaaactttcccaggttcaaactcaatctaaaaacttgtctaatcattattatacatgttcaggcactcaaaatcatctaaagtt 43927642  T
Q  213 caacttaagg 222  Q
    | ||||||||    
T  43927643 cgacttaagg 43927652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 138 - 210
Target Start/End: Complemental strand, 49389378 - 49389305
Alignment:
Q  138 tccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaagg 210  Q
    ||||||||||||||||||||  ||||||| ||||||||||||| | | |||||||||||||||||| |||||||    
T  49389378 tccaggttcaatctcattctccaatctttcctaatcattattagacatgttcaggcactcaaaaacatctaagg 49389305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 13210199 - 13210096
Alignment:
Q  1 aactcacatcaactcgtgcgacaagtatcgcatttaacct-aacaaagaattctgtaactgggtaactcgcgaggcgatggcctctactcgccatggcga 99  Q
    ||||||||||||||||||||||||  ||| |||||||||| ||||| | ||||||||||       ||||||||||||  ||||||||||||||||||||    
T  13210199 aactcacatcaactcgtgcgacaaagatcacatttaacctaaacaaggcattctgtaacacaagtgctcgcgaggcgagagcctctactcgccatggcga 13210100  T
Q  100 gttc 103  Q
    ||||    
T  13210099 gttc 13210096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 116 - 228
Target Start/End: Original strand, 14501564 - 14501677
Alignment:
Q  116 caaaaatccattcttaaactattccaggttcaatctcattctagaatcttttctaatcattatta--catagttcaggcactcaaaaacctctaaggtcc 213  Q
    |||||||||||| ||||||  | |||||| |||||||| |||| || |||  |||||||||||||  |||| ||||||||||||||| | |||||||| |    
T  14501564 caaaaatccatttttaaaccttcccaggtccaatctcaatctaaaaccttgcctaatcattattatacata-ttcaggcactcaaaatcatctaaggttc 14501662  T
Q  214 aacttaaggggcaaa 228  Q
    |||||||||| ||||    
T  14501663 aacttaagggacaaa 14501677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 66 - 210
Target Start/End: Complemental strand, 11424569 - 11424424
Alignment:
Q  66 ctcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactcccaaaaatc-cattcttaaactattccaggttcaatctcattctagaatct 164  Q
    ||||||||||||  ||||||||||||| ||||||||||||||   | | | |||| |  |||||| || || |||||||||||||||||||||| | | |    
T  11424569 ctcgcgaggcgagagcctctactcgccgtggcgagttcaggtcagagttcaaaaagtttcattctaaatct-ttccaggttcaatctcattctacattat 11424471  T
Q  165 tttctaatcattattacata-gttcaggcactcaaaaacctctaagg 210  Q
    || ||||||||||||| | | |||||||||||||||| | |||||||    
T  11424470 ttcctaatcattattagacatgttcaggcactcaaaagcatctaagg 11424424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 137 - 217
Target Start/End: Original strand, 14179708 - 14179789
Alignment:
Q  137 ttccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaaggtccaact 217  Q
    ||||| |||||||||||||||| | ||||| ||||||||||||| | | |||||||||||||||| | |||||||| |||||    
T  14179708 ttccaagttcaatctcattctacattctttcctaatcattattagacatgttcaggcactcaaaagcatctaaggttcaact 14179789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 114 - 211
Target Start/End: Original strand, 12378359 - 12378457
Alignment:
Q  114 cccaaaaatccattcttaaactattccaggttcaatctcattctagaatcttttctaatcattat--tacatagttcaggcactcaaaaacctctaaggt 211  Q
    |||||||||||||| ||||||| | ||||||||||||||| |||| || | |  |||||||||||  |||||| ||||||||||||||| | ||||||||    
T  12378359 cccaaaaatccatttttaaactttcccaggttcaatctcaatctaaaaacatgcctaatcattattgtacata-ttcaggcactcaaaatcatctaaggt 12378457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 116 - 228
Target Start/End: Original strand, 45797608 - 45797721
Alignment:
Q  116 caaaaatccattcttaaactattccaggttcaatctcattctagaatcttttctaatcattat--tacatagttcaggcactcaaaaacctctaaggtcc 213  Q
    |||||||||||| ||||||  | |||||| |||||||| |||| || |||  |||||||||||  |||||| ||||||||||||||| | ||||| || |    
T  45797608 caaaaatccatttttaaaccttcccaggtccaatctcaatctaaaaacttacctaatcattattatacata-ttcaggcactcaaaatcatctaaagttc 45797706  T
Q  214 aacttaaggggcaaa 228  Q
    |||||||||| ||||    
T  45797707 aacttaagggacaaa 45797721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 137 - 210
Target Start/End: Original strand, 18438920 - 18438994
Alignment:
Q  137 ttccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaagg 210  Q
    ||||||||||||||||||| || | ||||| ||||||||||||| | | |||||||||||||||| | |||||||    
T  18438920 ttccaggttcaatctcattttacattctttcctaatcattattagacatgttcaggcactcaaaagcatctaagg 18438994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 136 - 217
Target Start/End: Complemental strand, 20698183 - 20698101
Alignment:
Q  136 attccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaaggtccaact 217  Q
    ||||||||||||||||||| ||| | ||||| ||||||||||||| | | |||||| ||||||||| | |||||||| |||||    
T  20698183 attccaggttcaatctcatcctacattctttcctaatcattattagacatgttcagacactcaaaagcatctaaggttcaact 20698101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 58 - 210
Target Start/End: Original strand, 26687193 - 26687347
Alignment:
Q  58 ctgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactcccaaaaatc-cattcttaaactattccaggttcaatctcattc 156  Q
    |||||| |||||||||||||  |||||| |||||| ||||||||||||||   | ||||| || |  ||||||  ||   |||||||||||||||||| |    
T  26687193 ctgggtcactcgcgaggcgagagcctctgctcgccgtggcgagttcaggtcagaatcccacaagtttcattctacaatctttccaggttcaatctcatcc 26687292  T
Q  157 tagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaagg 210  Q
    || | ||||| ||||||||||||| | | ||| |||||||||||| | |||||||    
T  26687293 tacattctttcctaatcattattagacatgtttaggcactcaaaagcatctaagg 26687347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 58 - 210
Target Start/End: Original strand, 14973161 - 14973314
Alignment:
Q  58 ctgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactcccaaaaatccattcttaaactattccaggttcaatctcattct 157  Q
    |||||| ||| |||||||||  |||||| |||||| ||||||||||||||   | | |||||| | | |||| |||   || | |||| |||||||||||    
T  14973161 ctgggtcacttgcgaggcgagagcctctgctcgccgtggcgagttcaggtcagaattccaaaagttctttctaaaatcttttctggtttaatctcattct 14973260  T
Q  158 agaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaagg 210  Q
    | | ||||| ||||||||||||| | | |||||||||||||||| | |||||||    
T  14973261 acattctttcctaatcattattagacatgttcaggcactcaaaagcatctaagg 14973314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 115 - 180
Target Start/End: Complemental strand, 37250869 - 37250804
Alignment:
Q  115 ccaaaaatccattcttaaactattccaggttcaatctcattctagaatcttttctaatcattatta 180  Q
    ||||||||||||| ||||||| | ||||||||||||||| |||| || |||  |||||||||||||    
T  37250869 ccaaaaatccatttttaaactttcccaggttcaatctcaatctaaaaacttgcctaatcattatta 37250804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 5 - 42
Target Start/End: Complemental strand, 49389496 - 49389459
Alignment:
Q  5 cacatcaactcgtgcgacaagtatcgcatttaacctaa 42  Q
    ||||||||||||||||||||| ||||||||||||||||    
T  49389496 cacatcaactcgtgcgacaaggatcgcatttaacctaa 49389459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 139 - 210
Target Start/End: Original strand, 16104168 - 16104240
Alignment:
Q  139 ccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaagg 210  Q
    |||||||||| ||||||||  ||||||| ||||||||||||| | | ||||||||||||| |||| |||||||    
T  16104168 ccaggttcaacctcattctccaatctttcctaatcattattagacatgttcaggcactcagaaacatctaagg 16104240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 137 - 199
Target Start/End: Complemental strand, 14576568 - 14576505
Alignment:
Q  137 ttccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaa 199  Q
    ||||||||||||| |||||||| | |||||||||||||| |||| | | |||||||||||||||    
T  14576568 ttccaggttcaatgtcattctacattcttttctaatcataattagacatgttcaggcactcaaa 14576505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 137 - 199
Target Start/End: Original strand, 17488243 - 17488306
Alignment:
Q  137 ttccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaa 199  Q
    |||||||||||||||||| ||| | ||||| ||||||||||||| | | |||||||||||||||    
T  17488243 ttccaggttcaatctcatcctacattctttcctaatcattattagacatgttcaggcactcaaa 17488306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 137 - 199
Target Start/End: Original strand, 17499725 - 17499788
Alignment:
Q  137 ttccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaa 199  Q
    |||||||||||||||||| ||| | ||||| ||||||||||||| | | |||||||||||||||    
T  17499725 ttccaggttcaatctcatcctacattctttcctaatcattattagacatgttcaggcactcaaa 17499788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 114 - 220
Target Start/End: Complemental strand, 22110033 - 22109926
Alignment:
Q  114 cccaaaaatccattcttaaactattccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaaggtc 212  Q
    |||||||||||||| | ||||  |  ||||||||||||||  ||| || |||  ||||||||||||| | | |||||||||||||||||| ||||| ||     
T  22110033 cccaaaaatccattttcaaacactcacaggttcaatctcaaactaaaaacttgcctaatcattattatacatgttcaggcactcaaaaacatctaaagtt 22109934  T
Q  213 caacttaa 220  Q
    ||||||||    
T  22109933 caacttaa 22109926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 66 - 104
Target Start/End: Complemental strand, 606173 - 606135
Alignment:
Q  66 ctcgcgaggcgatggcctctactcgccatggcgagttca 104  Q
    |||||||||||| | ||||||||||||||||||||||||    
T  606173 ctcgcgaggcgaggacctctactcgccatggcgagttca 606135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 137 - 217
Target Start/End: Original strand, 12340138 - 12340219
Alignment:
Q  137 ttccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaaggtccaact 217  Q
    |||||||||||||||||| ||| | ||||| ||||||| ||||| | | |||||||||||||||  | |||||||| |||||    
T  12340138 ttccaggttcaatctcatcctacattctttcctaatcaatattagacatgttcaggcactcaaaggcatctaaggttcaact 12340219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 16104030 - 16104071
Alignment:
Q  1 aactcacatcaactcgtgcgacaagtatcgcatttaacctaa 42  Q
    ||||||||||||||||||||||||  | ||||||||||||||    
T  16104030 aactcacatcaactcgtgcgacaaagagcgcatttaacctaa 16104071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 58 - 107
Target Start/End: Complemental strand, 20698251 - 20698202
Alignment:
Q  58 ctgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggt 107  Q
    |||||| |||||||||||||  |||||| |||||| ||||||||||||||    
T  20698251 ctgggtcactcgcgaggcgagagcctctgctcgccgtggcgagttcaggt 20698202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 106
Target Start/End: Complemental strand, 22110221 - 22110116
Alignment:
Q  1 aactcacatcaactcgtgcgacaagtatcgcatttaacctaacaaagaattctgtaactgggtaactcgcgaggcgatggcctctactcgccatggcgag 100  Q
    |||||||||||| |||||||||||   || |||| |||||||||| |  ||||||  ||    | ||||||||||||  |||||||||||| ||||||||    
T  22110221 aactcacatcaattcgtgcgacaaaggtcacattaaacctaacaaggtgttctgtccctcttgagctcgcgaggcgagagcctctactcgctatggcgag 22110122  T
Q  101 ttcagg 106  Q
    ||||||    
T  22110121 ttcagg 22110116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 137 - 200
Target Start/End: Original strand, 13442660 - 13442724
Alignment:
Q  137 ttccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaa 200  Q
    |||||||||||||||||| ||| | | ||| ||||||||||||| | | ||||||||||||||||    
T  13442660 ttccaggttcaatctcatcctacattttttcctaatcattattagacatgttcaggcactcaaaa 13442724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 58 - 102
Target Start/End: Complemental strand, 23083176 - 23083132
Alignment:
Q  58 ctgggtaactcgcgaggcgatggcctctactcgccatggcgagtt 102  Q
    |||||| | |||||||||||  |||||||||||||||||||||||    
T  23083176 ctgggtcattcgcgaggcgagagcctctactcgccatggcgagtt 23083132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 108; Significance: 3e-54; HSPs: 40)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 4 - 229
Target Start/End: Complemental strand, 38855119 - 38854893
Alignment:
Q  4 tcacatcaactcgtgcgacaagtatcgcatttaacctaa-caaagaattctgtaactgggtaactcgcgaggcgatggcctctactcgccatggcgagtt 102  Q
    |||||||||||||||||||||  ||||  |||||||||| ||| | |||||||||||||| || ||||||||||| ||||||||||||||||||||||||    
T  38855119 tcacatcaactcgtgcgacaaagatcgtgtttaacctaagcaaggcattctgtaactgggcaattcgcgaggcgagggcctctactcgccatggcgagtt 38855020  T
Q  103 caggtgtaactcccaaaaatccattcttaaactattccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaa 201  Q
    |||||||||||| | ||||| | |||||||||||||||||||| ||||| | |||  ||||||| ||||||||||||| | | |||||||||||||||||    
T  38855019 caggtgtaactctc-aaaattcgttcttaaactattccaggttaaatcttaatctccaatctttcctaatcattattagacatgttcaggcactcaaaaa 38854921  T
Q  202 cctctaaggtccaacttaaggggcaaaa 229  Q
    | |||||||| |||||||| || |||||    
T  38854920 catctaaggttcaacttaaaggtcaaaa 38854893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 1 - 229
Target Start/End: Original strand, 6520618 - 6520847
Alignment:
Q  1 aactcacatcaactcgtgcgacaagtatcgcatttaacctaacaaagaattctgtaactgggtaactcgcgaggcgatggcctctactcgccatggcgag 100  Q
    ||||||||||||||| ||| ||||  ||||||||||||||||||||| ||||||||| |||| |  | ||||||||| |||||||||||||||||||||     
T  6520618 aactcacatcaactcatgcaacaaagatcgcatttaacctaacaaagcattctgtaattgggcagtttgcgaggcgagggcctctactcgccatggcgaa 6520717  T
Q  101 ttcaggtgtaactcccaaaaatccattcttaaactattccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaa 199  Q
    ||||||| |||||| ||||||||||||||||||||||| |||||||| ||| | |||  ||||||| ||||| ||||||| | | |||||| ||||||||    
T  6520718 ttcaggtctaactctcaaaaatccattcttaaactatttcaggttcagtcttaatctccaatctttcctaattattattagacatgttcagacactcaaa 6520817  T
Q  200 aacctctaaggtccaacttaaggggcaaaa 229  Q
    ||| |||||||| |||||||| || |||||    
T  6520818 aacatctaaggttcaacttaaaggtcaaaa 6520847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 1 - 142
Target Start/End: Original strand, 21285848 - 21285989
Alignment:
Q  1 aactcacatcaactcgtgcgacaagtatcgcatttaacctaacaaagaattctgtaactgggtaactcgcgaggcgatggcctctactcgccatggcgag 100  Q
    ||||||||||||||||||||| ||  ||||||||||||||||||||| |||||||||||||| |||| ||||||||| |||||||||||||||| |||||    
T  21285848 aactcacatcaactcgtgcgataaagatcgcatttaacctaacaaagcattctgtaactgggcaacttgcgaggcgagggcctctactcgccatagcgag 21285947  T
Q  101 ttcaggtgtaactcccaaaaatccattcttaaactattccag 142  Q
    |||||||||||||||||||||| |||||||||||||||||||    
T  21285948 ttcaggtgtaactcccaaaaattcattcttaaactattccag 21285989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 27 - 233
Target Start/End: Original strand, 39834107 - 39834315
Alignment:
Q  27 atcgcatttaacctaa-caaagaattctgtaactgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactcccaaaaatcca 125  Q
    |||||||||||| ||| ||| | ||||||||| |||||| ||||||||||||  ||||||||||||||||||||||||||||| ||||| |||| || ||    
T  39834107 atcgcatttaacttaaacaaggtattctgtaaatgggtagctcgcgaggcgagagcctctactcgccatggcgagttcaggtgcaactcacaaagattca 39834206  T
Q  126 ttcttaaactattccaggttcaatctcattctagaatcttttctaatcattat--tacatagttcaggcactcaaaaacctctaaggtccaacttaaggg 223  Q
    |||||||||||||||||||||||||||| |||| ||||||| |||||||||||  |||| |||| |||||||||||||| |||||||| | |||||| ||    
T  39834207 ttcttaaactattccaggttcaatctcaatctacaatctttcctaatcattatcataca-agtttaggcactcaaaaacatctaaggttcgacttaaagg 39834305  T
Q  224 gcaaaactac 233  Q
     |||||||||    
T  39834306 tcaaaactac 39834315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 1 - 202
Target Start/End: Original strand, 21673954 - 21674157
Alignment:
Q  1 aactcacatcaactcgtgcgacaagtatcgcatttaacctaa-caaagaattctgtaactgggtaactcgcgaggcgatggcctctactcgccatggcga 99  Q
    ||||||||| |||| |||||||||  |||||||||| ||||| ||| | ||||||||||  |  || ||||||||||| |||||||||||||||||||||    
T  21673954 aactcacattaacttgtgcgacaaagatcgcatttatcctaaacaaggcattctgtaacaagtcaattcgcgaggcgagggcctctactcgccatggcga 21674053  T
Q  100 gttcaggtgtaactcccaaaaatccattcttaaactattccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaa 198  Q
    ||||||||| ||||| |||| || |||||| |||   |||||||||||||||||||||  ||||||| ||||||||||||| | | ||||||||||||||    
T  21674054 gttcaggtgcaactcacaaatattcattctaaaatctttccaggttcaatctcattctccaatctttcctaatcattattagacatgttcaggcactcaa 21674153  T
Q  199 aaac 202  Q
    ||||    
T  21674154 aaac 21674157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 1 - 202
Target Start/End: Complemental strand, 23760711 - 23760509
Alignment:
Q  1 aactcacatcaactcgtgcgacaagtatcgcatttaacctaacaaagaattctgtaactgggtaactcgcgaggcgatggcctctactcgccatggcgag 100  Q
    |||||||||||||| |||||||||  |||||||||| |||||||| | ||| ||||||| |  || ||||||||||| |||||||||||||| |||| ||    
T  23760711 aactcacatcaacttgtgcgacaaagatcgcatttatcctaacaaggcattttgtaactagtcaattcgcgaggcgagggcctctactcgccttggcaag 23760612  T
Q  101 ttcaggtgtaactcccaaaaatccattcttaaactattccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaa 199  Q
    ||||||| ||||||||| || | | |||||||||||||||||||||||||||| | |  ||| ||| ||||||||||||| | | ||||||| |||||||    
T  23760611 ttcaggtataactcccacaagttcgttcttaaactattccaggttcaatctcaatatccaatatttcctaatcattattagacatgttcaggaactcaaa 23760512  T
Q  200 aac 202  Q
    |||    
T  23760511 aac 23760509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 65 - 197
Target Start/End: Complemental strand, 19801234 - 19801101
Alignment:
Q  65 actcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactcccaaaaatccattcttaaactattccaggttcaatctcattctagaatct 164  Q
    ||||||||||||| | ||||||||||||||||||||||||||| ||||||||| || | | |||||||||||||||||||||||||| |||||  | |||    
T  19801234 actcgcgaggcgaggacctctactcgccatggcgagttcaggtataactcccacaagttcgttcttaaactattccaggttcaatcttattctctagtct 19801135  T
Q  165 tttctaatcattattacata-gttcaggcactca 197  Q
    || ||||||||||||| | | |||||||||||||    
T  19801134 ttcctaatcattattagacatgttcaggcactca 19801101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 202
Target Start/End: Complemental strand, 26355570 - 26355367
Alignment:
Q  1 aactcacatcaactcgtgcgacaagtatcgcatttaacctaa-caaagaattctgtaactgggtaactcgcgaggcgatggcctctactcgccatggcga 99  Q
    |||||||||||||| |||||||||  |||||||||||| ||| ||| | ||||||||||| | || |||| |||||||  |||||||||||||||||| |    
T  26355570 aactcacatcaacttgtgcgacaaagatcgcatttaacataaacaaggcattctgtaactagttagctcgtgaggcgagagcctctactcgccatggcaa 26355471  T
Q  100 gttcaggtgtaactcccaaaaatccattcttaaactattccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaa 198  Q
    ||||||||  || || ||||||| |||||| ||    ||||||||||||||||| |||  ||||| | ||||||||||||| | | ||||||||||||||    
T  26355470 gttcaggtacaattcacaaaaattcattctaaagtctttccaggttcaatctcaatcttcaatctctcctaatcattattagacatgttcaggcactcaa 26355371  T
Q  199 aaac 202  Q
    ||||    
T  26355370 aaac 26355367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 49 - 210
Target Start/End: Original strand, 41598482 - 41598644
Alignment:
Q  49 attctgtaactgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactcccaaaaatccattcttaaactattccaggttcaa 148  Q
    ||||||||||| ||| |||||||||||||  |||||| |||||||||||||||||||||   | |||||||  | |||||| |||   ||||||||||||    
T  41598482 attctgtaactaggtcactcgcgaggcgagagcctctgctcgccatggcgagttcaggtcagattcccaaagtttcattctaaaatctttccaggttcaa 41598581  T
Q  149 tctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaagg 210  Q
    |||||||||| | |||||  |||||||||||| | | |||||||||||||||| | |||||||    
T  41598582 tctcattctacattctttcataatcattattagacatgttcaggcactcaaaagcatctaagg 41598644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 116 - 223
Target Start/End: Complemental strand, 13507765 - 13507657
Alignment:
Q  116 caaaaatccattcttaaactattccaggttcaatctcattctagaatcttttctaatcattat--tacatagttcaggcactcaaaaacctctaaggtcc 213  Q
    |||||||||||| ||||||| | ||||||||| ||||| |||| || ||| ||||||||||||  |||||| ||||||||||||||| | |||||||| |    
T  13507765 caaaaatccatttttaaactttcccaggttcagtctcaatctaaaaacttgtctaatcattattatacata-ttcaggcactcaaaatcatctaaggttc 13507667  T
Q  214 aacttaaggg 223  Q
    ||||||||||    
T  13507666 aacttaaggg 13507657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 116 - 223
Target Start/End: Complemental strand, 13597297 - 13597189
Alignment:
Q  116 caaaaatccattcttaaactattccaggttcaatctcattctagaatcttttctaatcattat--tacatagttcaggcactcaaaaacctctaaggtcc 213  Q
    |||||||||||| ||||||| | ||||||||| ||||| |||| || ||| ||||||||||||  |||||| ||||||||||||||| | |||||||| |    
T  13597297 caaaaatccatttttaaactttcccaggttcagtctcaatctaaaaacttgtctaatcattattatacata-ttcaggcactcaaaatcatctaaggttc 13597199  T
Q  214 aacttaaggg 223  Q
    ||||||||||    
T  13597198 aacttaaggg 13597189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 115 - 233
Target Start/End: Original strand, 20499024 - 20499143
Alignment:
Q  115 ccaaaaatccattcttaaactattccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaaggtcc 213  Q
    ||||||||||||| ||||||| |  |||||||||||||| |||| || |||  ||||||||||||| | | |||||||||||||||| | ||||| || |    
T  20499024 ccaaaaatccatttttaaactttctcaggttcaatctcaatctaaaaacttacctaatcattattatacatgttcaggcactcaaaatcatctaaagttc 20499123  T
Q  214 aacttaaggggcaaaactac 233  Q
    |||| ||||| |||||||||    
T  20499124 aactcaagggtcaaaactac 20499143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 58 - 180
Target Start/End: Original strand, 22875372 - 22875494
Alignment:
Q  58 ctgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactcccaaaaatccattcttaaactattccaggttcaatctcattct 157  Q
    |||||| |||||||||||||  |||||| |||| ||||||||||||||||   | |||||||  | |||||| |||   |||||||||||| ||| ||||    
T  22875372 ctgggtcactcgcgaggcgagagcctctgctcgtcatggcgagttcaggtcagattcccaaagtttcattctaaaatctttccaggttcaacctcgttct 22875471  T
Q  158 agaatcttttctaatcattatta 180  Q
    | ||||||| |||||||||||||    
T  22875472 acaatctttcctaatcattatta 22875494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 58 - 217
Target Start/End: Original strand, 20536514 - 20536675
Alignment:
Q  58 ctgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactccca-aaaatccattcttaaactattccaggttcaatctcattc 156  Q
    |||||| |||||||||||||  ||||||||||||| ||||||||||||||   | ||||| ||  | ||||||  ||   |||||||||||||||||| |    
T  20536514 ctgggtcactcgcgaggcgagagcctctactcgccgtggcgagttcaggtcagaatcccataagtttcattctacaatctttccaggttcaatctcatcc 20536613  T
Q  157 tagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaaggtccaact 217  Q
    || | ||||| ||||||||||| | | | |||||||||||||||| | |||||||| |||||    
T  20536614 tacattctttcctaatcattatcagacatgttcaggcactcaaaagcatctaaggttcaact 20536675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 141 - 220
Target Start/End: Original strand, 21491382 - 21491462
Alignment:
Q  141 aggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaaggtccaacttaa 220  Q
    |||||||||||||||||| | ||||| ||||||||||||| | | |||||||||||||||| | |||||||| ||||||||    
T  21491382 aggttcaatctcattctacattctttcctaatcattattagacatgttcaggcactcaaaagcatctaaggttcaacttaa 21491462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 36 - 210
Target Start/End: Original strand, 23406665 - 23406841
Alignment:
Q  36 aacctaacaaagaattctgtaactgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactccca-aaaatccattcttaaac 134  Q
    |||||||||| | | |||||  |||||| |||||||||||||  ||||||||||||| ||||||||||||||   | ||||| ||  | ||||||  ||     
T  23406665 aacctaacaaggcactctgtttctgggtcactcgcgaggcgagagcctctactcgccgtggcgagttcaggtcagaatcccacaagtttcattctacaat 23406764  T
Q  135 tattccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaagg 210  Q
      |||||||| ||||||||| ||| | ||||| ||||||||||||| | | |||||||||||||||| | |||||||    
T  23406765 ctttccaggtccaatctcatcctacattctttcctaatcattattagacatgttcaggcactcaaaagcatctaagg 23406841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 140 - 217
Target Start/End: Complemental strand, 5866009 - 5865931
Alignment:
Q  140 caggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaaggtccaact 217  Q
    ||||||||||||||||||| | ||||| ||||||||||||| | | |||||||||||||||| | |||||||| |||||    
T  5866009 caggttcaatctcattctacattctttcctaatcattattagacatgttcaggcactcaaaagcatctaaggttcaact 5865931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 58 - 210
Target Start/End: Original strand, 6759563 - 6759717
Alignment:
Q  58 ctgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactcccaaaaatc-cattcttaaactattccaggttcaatctcattc 156  Q
    |||||| |||||||||||||  |||||| |||||| ||||||||||||||   | | |||||| |  |||||| |||   ||||| ||||||||||||||    
T  6759563 ctgggtcactcgcgaggcgagagcctctgctcgccgtggcgagttcaggtcagatttccaaaagtttcattctaaaatatttccaagttcaatctcattc 6759662  T
Q  157 tagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaagg 210  Q
    || | ||||| ||||||||||||| | | ||||| |||||||||| | |||||||    
T  6759663 tacattctttcctaatcattattagacatgttcaagcactcaaaagcatctaagg 6759717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 140 - 217
Target Start/End: Original strand, 17141302 - 17141380
Alignment:
Q  140 caggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaaggtccaact 217  Q
    ||||||||||||||||||| | ||||| ||||||||||||| | | |||||||||||||||| | |||||||| |||||    
T  17141302 caggttcaatctcattctacattctttcctaatcattattagacatgttcaggcactcaaaagcatctaaggttcaact 17141380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 136 - 211
Target Start/End: Complemental strand, 45130767 - 45130691
Alignment:
Q  136 attccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaaggt 211  Q
    ||||||||||||||||||| ||| | ||||| ||||||||||||| | | |||||||||||||||| | ||||||||    
T  45130767 attccaggttcaatctcatcctacattctttcctaatcattattagacatgttcaggcactcaaaagcatctaaggt 45130691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 114 - 222
Target Start/End: Complemental strand, 17266674 - 17266565
Alignment:
Q  114 cccaaaaatccattcttaaactattccaggttcaatctcattctagaatcttttctaatcattat--tacatagttcaggcactcaaaaacctctaaggt 211  Q
    |||||||||||||| ||||||| |   ||||||||||||| |||| || |||  |||||||||||  |||||| ||||||||||||||||| ||||| ||    
T  17266674 cccaaaaatccatttttaaactttcgtaggttcaatctcaatctaaaaacttgcctaatcattattatacata-ttcaggcactcaaaaacatctaaagt 17266576  T
Q  212 ccaacttaagg 222  Q
     | ||||||||    
T  17266575 tcgacttaagg 17266565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 137 - 210
Target Start/End: Complemental strand, 18878972 - 18878898
Alignment:
Q  137 ttccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaagg 210  Q
    |||||||||||||||||| ||| | ||||| ||||||||||||| | | |||||||||||||||| | |||||||    
T  18878972 ttccaggttcaatctcatcctacattctttcctaatcattattagacatgttcaggcactcaaaagcatctaagg 18878898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 114 - 222
Target Start/End: Complemental strand, 983084 - 982975
Alignment:
Q  114 cccaaaaatccattcttaaactattccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaaggtc 212  Q
    |||||||||||||| ||||||| |  |||||||||||||| |||| || |||| ||||||| || || | | |||||| ||||||||| | ||||| ||     
T  983084 cccaaaaatccatttttaaactttctcaggttcaatctcaatctaaaaactttcctaatcactaatatacatgttcagacactcaaaatcatctaaagtt 982985  T
Q  213 caacttaagg 222  Q
    ||||||||||    
T  982984 caacttaagg 982975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 114 - 200
Target Start/End: Complemental strand, 17439187 - 17439100
Alignment:
Q  114 cccaaaaatccattcttaaactattccaggttcaatctcattctagaatcttttctaatcattat--tacatagttcaggcactcaaaa 200  Q
    |||||||||||||| ||||||| | |||||||||||| || |||| || |||  |||||||||||  |||||| |||||||||||||||    
T  17439187 cccaaaaatccatttttaaactttcccaggttcaatcccaatctaaaaacttgcctaatcattattgtacata-ttcaggcactcaaaa 17439100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 185 - 256
Target Start/End: Original strand, 21286656 - 21286724
Alignment:
Q  185 gttcaggcactcaaaaacctctaaggtccaacttaaggggcaaaactactacgaaaccatgtcgactctctg 256  Q
    ||||||||||| |||||| |||||||| ||||||||||| ||||   ||||||||| ||||| |||||||||    
T  21286656 gttcaggcacttaaaaacatctaaggttcaacttaagggtcaaa---actacgaaatcatgttgactctctg 21286724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 137 - 217
Target Start/End: Complemental strand, 21918745 - 21918664
Alignment:
Q  137 ttccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaaggtccaact 217  Q
    |||||||||||||||| | ||| | ||||||||||||||||||| | | |||||||||||| ||| | |||||||| |||||    
T  21918745 ttccaggttcaatctcttcctacattcttttctaatcattattagacatgttcaggcactccaaagcatctaaggttcaact 21918664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 114 - 200
Target Start/End: Original strand, 24353463 - 24353550
Alignment:
Q  114 cccaaaaatccattcttaaactattccaggttcaatctcattctagaatcttttctaatcattat--tacatagttcaggcactcaaaa 200  Q
    ||||||||||||||  |||||| | ||||||||||||||| |||| || |||  |||||||||||  |||||| |||||||||||||||    
T  24353463 cccaaaaatccatttataaactttcccaggttcaatctcaatctaaaaacttgcctaatcattattatacata-ttcaggcactcaaaa 24353550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 50 - 211
Target Start/End: Complemental strand, 21415049 - 21414887
Alignment:
Q  50 ttctgtaactgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactcccaaaaatccattcttaaactattccaggttcaat 149  Q
    |||||||| |||  ||||||||||||||  | |||||||||||||||||||||  |||  ||  | ||  | |||||| | || ||| |||  |||||||    
T  21415049 ttctgtaattggacaactcgcgaggcgagaggctctactcgccatggcgagttagggtaaaatactcaccattccattttgaagctaatccgagttcaat 21414950  T
Q  150 ctcattctagaatcttttctaatcatta--ttacatagttcaggcactcaaaaacctctaaggt 211  Q
    ||||||||| ||||||| ||||||||||   | |||  ||||||||||||||||| ||||||||    
T  21414949 ctcattctacaatctttcctaatcattagtgtgcat-cttcaggcactcaaaaacatctaaggt 21414887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 137 - 210
Target Start/End: Original strand, 7373135 - 7373209
Alignment:
Q  137 ttccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaagg 210  Q
    ||||||||||||| |||| ||| | ||||| ||||||||||||| | | |||||||||||||||| | |||||||    
T  7373135 ttccaggttcaatttcatcctacattctttcctaatcattattagacatgttcaggcactcaaaagcatctaagg 7373209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 137 - 210
Target Start/End: Complemental strand, 18818145 - 18818071
Alignment:
Q  137 ttccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaagg 210  Q
    |||||||||||||||||| ||| | | ||| ||||||||||||| | | |||||||||||||||| | |||||||    
T  18818145 ttccaggttcaatctcatcctacattttttcctaatcattattagacatgttcaggcactcaaaagcatctaagg 18818071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 65 - 107
Target Start/End: Complemental strand, 21918808 - 21918766
Alignment:
Q  65 actcgcgaggcgatggcctctactcgccatggcgagttcaggt 107  Q
    |||||||||||||  |||||| |||||||||||||||||||||    
T  21918808 actcgcgaggcgagagcctctgctcgccatggcgagttcaggt 21918766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 141 - 210
Target Start/End: Original strand, 22627125 - 22627195
Alignment:
Q  141 aggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaagg 210  Q
    |||||||||||||| ||| | ||||| ||||||||||||| | | |||||||||||||||| | |||||||    
T  22627125 aggttcaatctcatcctacattctttcctaatcattattagacatgttcaggcactcaaaagcatctaagg 22627195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 136 - 217
Target Start/End: Original strand, 31971629 - 31971711
Alignment:
Q  136 attccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaaggtccaact 217  Q
    ||||||||||||||||||| ||| |  |||| ||||||||||||| | | |||||||||| ||||| | |||||||| |||||    
T  31971629 attccaggttcaatctcatcctacatcctttcctaatcattattagacatgttcaggcacacaaaagcatctaaggttcaact 31971711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 58 - 107
Target Start/End: Complemental strand, 18818224 - 18818175
Alignment:
Q  58 ctgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggt 107  Q
    |||||| |||||||||||||  |||||| |||||| ||||||||||||||    
T  18818224 ctgggtcactcgcgaggcgagagcctctgctcgccgtggcgagttcaggt 18818175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 137 - 217
Target Start/End: Original strand, 21255605 - 21255686
Alignment:
Q  137 ttccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaaggtccaact 217  Q
    |||||||||||||||||| ||| | ||||| ||||||||||||| | | |||  ||||||||||| | |||||||| |||||    
T  21255605 ttccaggttcaatctcatcctacattctttcctaatcattattagacatgtttgggcactcaaaagcatctaaggttcaact 21255686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 114 - 200
Target Start/End: Original strand, 37116787 - 37116874
Alignment:
Q  114 cccaaaaatccattcttaaactattccaggttcaatctcattctagaatcttttctaatcattat--tacatagttcaggcactcaaaa 200  Q
    |||||||||||||| ||| ||| |  |||||||||||||| |||| || |||  |||||||||||  |||||| |||||||||||||||    
T  37116787 cccaaaaatccatttttatactttctcaggttcaatctcaatctaaaaacttgcctaatcattattatacata-ttcaggcactcaaaa 37116874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 21255470 - 21255526
Alignment:
Q  1 aactcacatcaactcgtgcgacaagtatcgcatttaacctaacaaagaattctgtaa 57  Q
    ||||||||||||||||  ||||||  |||||||||||||||| || | |||||||||    
T  21255470 aactcacatcaactcgaacgacaaagatcgcatttaacctaaaaaggcattctgtaa 21255526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 22364913 - 22364957
Alignment:
Q  1 aactcacatcaactcgtgcgacaagtatcgcatttaacctaacaa 45  Q
    ||||||||||||||||||||||||   || |||||||||||||||    
T  22364913 aactcacatcaactcgtgcgacaaaggtcacatttaacctaacaa 22364957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 136 - 180
Target Start/End: Complemental strand, 25362887 - 25362843
Alignment:
Q  136 attccaggttcaatctcattctagaatcttttctaatcattatta 180  Q
    ||||||||||||||||||| ||| | ||||| |||||||||||||    
T  25362887 attccaggttcaatctcatcctacattctttcctaatcattatta 25362843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 66 - 106
Target Start/End: Original strand, 37116664 - 37116704
Alignment:
Q  66 ctcgcgaggcgatggcctctactcgccatggcgagttcagg 106  Q
    ||||||||||||  |||||||||||| ||||||||||||||    
T  37116664 ctcgcgaggcgagagcctctactcgctatggcgagttcagg 37116704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0116 (Bit Score: 105; Significance: 2e-52; HSPs: 2)
Name: scaffold0116
Description:

Target: scaffold0116; HSP #1
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 66 - 217
Target Start/End: Complemental strand, 43590 - 43438
Alignment:
Q  66 ctcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactcccaaaaatccattcttaaactattccaggttcaatctcattctagaatctt 165  Q
    ||||||||||||  ||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  43590 ctcgcgaggcgagagcctctactcgtcatggcgagtacaggtgtaactcccaaaaatccattcttaaactattccaggttcaatctcaatctagaatctt 43491  T
Q  166 ttctaatcattattacata-gttcaggcactcaaaaacctctaaggtccaact 217  Q
    |||||||||| |||| | | |||||||||||||||||| |||||||| |||||    
T  43490 ttctaatcataattagacatgttcaggcactcaaaaacatctaaggttcaact 43438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0116; HSP #2
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 66 - 217
Target Start/End: Complemental strand, 47510 - 47358
Alignment:
Q  66 ctcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactcccaaaaatccattcttaaactattccaggttcaatctcattctagaatctt 165  Q
    ||||||||||||  ||||||||||| |||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  47510 ctcgcgaggcgagagcctctactcgtcatggctagtacaggtgtaactcccaaaaatccattcttaaactattccaggttcaatctcaatctagaatctt 47411  T
Q  166 ttctaatcattattacata-gttcaggcactcaaaaacctctaaggtccaact 217  Q
    |||||||||| |||| | | |||||||||||||||||| |||||||| |||||    
T  47410 ttctaatcataattagacatgttcaggcactcaaaaacatctaaggttcaact 47358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 103; Significance: 2e-51; HSPs: 42)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 1 - 217
Target Start/End: Complemental strand, 22921739 - 22921521
Alignment:
Q  1 aactcacatcaactcgtgcgacaagtatcgcatttaacctaa-caaagaattctgtaactgggtaactcgcgaggcgatggcctctactcgccatggcga 99  Q
    ||||||||||||||||||||||||  ||||||||||||| || ||| | ||||||||||| || |  |||||||||||  ||||||||||||||||||||    
T  22921739 aactcacatcaactcgtgcgacaaagatcgcatttaacccaaacaaggcattctgtaactaggcagttcgcgaggcgagagcctctactcgccatggcga 22921640  T
Q  100 gttcaggtgtaactcccaaaaatccattcttaaactattccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaa 198  Q
    ||||| || |||||| ||||||| | ||||||||||||||| |||||||||||| |||  ||||||| ||||||||||||| | | ||||||||||||||    
T  22921639 gttcaagtctaactctcaaaaattcgttcttaaactattcctggttcaatctcaatctccaatctttcctaatcattattagacatgttcaggcactcaa 22921540  T
Q  199 aaacctctaaggtccaact 217  Q
    |||| |||||||| |||||    
T  22921539 aaacatctaaggttcaact 22921521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 1 - 210
Target Start/End: Complemental strand, 52927852 - 52927642
Alignment:
Q  1 aactcacatcaactcgtgcgacaagtatcgcatttaacctaacaaagaattctgtaactgggtaactcgcgaggcgatggcctctactcgccatggcgag 100  Q
    ||||||||||||||||||||||||  ||||||||||||||||||| | |||||||||||||  || ||||||||||| ||||||||||||||||||||||    
T  52927852 aactcacatcaactcgtgcgacaaagatcgcatttaacctaacaaggcattctgtaactggtcaattcgcgaggcgagggcctctactcgccatggcgag 52927753  T
Q  101 ttcaggtgtaactcccaaaaatccattcttaaactattccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaa 199  Q
    ||||||| |||||   |||||| |||||  |||   |||||||||||||||||||||  |||||||  |||||||||||| | | |||||||||||||||    
T  52927752 ttcaggtctaactttaaaaaattcattccaaaatctttccaggttcaatctcattctccaatctttcataatcattattagacatgttcaggcactcaaa 52927653  T
Q  200 aacctctaagg 210  Q
    ||| |||||||    
T  52927652 aacatctaagg 52927642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 1 - 210
Target Start/End: Original strand, 33681258 - 33681469
Alignment:
Q  1 aactcacatcaactcgtgcgacaagtatcgcatttaacctaa-caaagaattctgtaactgggtaactcgcgaggcgatggcctctactcgccatggcga 99  Q
    |||||||||||||||||| |||||  |||||||||||| ||| ||| | | ||||||||||||||| |||||||||||  |||||| |||||||||||||    
T  33681258 aactcacatcaactcgtgtgacaaagatcgcatttaacataagcaaggcactctgtaactgggtaattcgcgaggcgagagcctctgctcgccatggcga 33681357  T
Q  100 gttcaggtgtaactcccaaaaatccattcttaaactattccaggttcaatctcattctagaatcttttctaatcattatt--acatagttcaggcactca 197  Q
    ||||||||| ||||| ||||||| |||||| |||   |||||||||||||||||||||  ||||||| ||||||||||||  ||||| |||||| |||||    
T  33681358 gttcaggtgcaactcacaaaaattcattctaaaatctttccaggttcaatctcattctccaatctttcctaatcattattagacata-ttcaggaactca 33681456  T
Q  198 aaaacctctaagg 210  Q
    ||||| |||||||    
T  33681457 aaaacatctaagg 33681469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 1 - 233
Target Start/End: Complemental strand, 35981558 - 35981325
Alignment:
Q  1 aactcacatcaactcgtgcgacaagtatcgcatttaacctaa-caaagaattctgtaactgggtaactcgcgaggcgatggcctctactcgccatggcga 99  Q
    |||||||||||| |||||||||||  ||||| |||||||||| ||| | ||||||||||| | || ||||||||||||  |||||||||| |||||||||    
T  35981558 aactcacatcaattcgtgcgacaaagatcgcttttaacctaaacaaggcattctgtaactagttagctcgcgaggcgagagcctctactcaccatggcga 35981459  T
Q  100 gttcaggtgtaactcccaaaaatccattcttaaactattccaggttcaatctcattctagaatcttttctaatcattat--tacatagttcaggcactca 197  Q
    ||||||||| ||||| || |||| | |||||||||||| ||||||||||||||| |||| ||||||| |||||||| ||  |||| ||||||||||||||    
T  35981458 gttcaggtgcaactcacataaattcgttcttaaactatcccaggttcaatctcaatctacaatctttcctaatcatcatcataca-agttcaggcactca 35981360  T
Q  198 aaaacctctaaggtccaacttaaggggcaaaactac 233  Q
    ||||| || ||||| | |||||| || |||||||||    
T  35981359 aaaacatc-aaggttcgacttaaaggtcaaaactac 35981325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 15 - 233
Target Start/End: Complemental strand, 28194306 - 28194086
Alignment:
Q  15 cgtgcgacaagtatcgcatttaacctaacaaaga-attctgtaactgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaact 113  Q
    ||||||||||  ||||||| ||||||||  |||| ||| ||||| |||||| ||||||||||||  ||||||||| ||||||||||||||||||| ||||    
T  28194306 cgtgcgacaaagatcgcatgtaacctaaacaagacattttgtaaatgggtagctcgcgaggcgagagcctctacttgccatggcgagttcaggtgcaact 28194207  T
Q  114 cccaaaaatccattcttaaactattccaggttcaatctcattctagaatcttttctaatcattat--tacatagttcaggcactcaaaaacctctaaggt 211  Q
    | |||| || ||||||||||||||| |||||||||||||| |||| ||||||| |||||||| ||  |||| ||||||||||||||||||| || |||||    
T  28194206 cacaaagattcattcttaaactatttcaggttcaatctcaatctacaatctttcctaatcatcatcataca-agttcaggcactcaaaaacatccaaggt 28194108  T
Q  212 ccaacttaaggggcaaaactac 233  Q
     | |||||| || |||||||||    
T  28194107 tcgacttaaaggtcaaaactac 28194086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 1 - 180
Target Start/End: Original strand, 20637099 - 20637279
Alignment:
Q  1 aactcacatcaactcgtgcgacaagtatcgcatttaacctaacaaaga-attctgtaactgggtaactcgcgaggcgatggcctctactcgccatggcga 99  Q
    ||||||||||||||| ||||||||  ||||| ||||||||||  |||| ||||||||||||  || ||||||||||||  ||||||||||||||||||||    
T  20637099 aactcacatcaactcatgcgacaaagatcgcttttaacctaaacaagacattctgtaactgattagctcgcgaggcgagagcctctactcgccatggcga 20637198  T
Q  100 gttcaggtgtaactcccaaaaatccattcttaaactattccaggttcaatctcattctagaatcttttctaatcattatta 180  Q
    ||||||||| ||||| ||||||| | |||||||||||||||||||||||||| | |||  ||||||| |||||||| ||||    
T  20637199 gttcaggtgcaactcacaaaaattcgttcttaaactattccaggttcaatcttaatctccaatctttcctaatcatcatta 20637279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 6 - 207
Target Start/End: Original strand, 20248531 - 20248734
Alignment:
Q  6 acatcaactcgtgcgacaagtatcgcatttaacctaacaaaga-attctgtaactgggtaactcgcgaggcgatggcctctactcgccatggcgagttca 104  Q
    ||||||||| |||||||||| ||||||||||||||||  |||  ||||||||||| | || ||||||||||||| |||||||||||||||||||||||||    
T  20248531 acatcaacttgtgcgacaagaatcgcatttaacctaaataaggcattctgtaactagttagctcgcgaggcgatagcctctactcgccatggcgagttca 20248630  T
Q  105 ggtgtaactcccaaaaatccattcttaaactat-tccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaac 202  Q
    |||  |  || ||||||| ||||| |||| | | ||||||||||||||||||||   |||||| ||||||||||||| | | ||||||||||||||||||    
T  20248631 ggttcagttcacaaaaattcattc-taaagtctctccaggttcaatctcattctccgatctttcctaatcattattagacatgttcaggcactcaaaaac 20248729  T
Q  203 ctcta 207  Q
     ||||    
T  20248730 atcta 20248734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 210
Target Start/End: Original strand, 22237879 - 22238089
Alignment:
Q  1 aactcacatcaactcgtgcgacaagtatcgcatttaacctaa-caaagaattctgtaactgggtaactcgcgaggcgatggcctctactcgccatggcga 99  Q
    ||||||||||||||||||||| ||  |||||||||||||||| ||| | ||||||||||| |  || ||||||||||| |||||||||||||||||||||    
T  22237879 aactcacatcaactcgtgcgaaaaagatcgcatttaacctaaacaaggcattctgtaactagtcaattcgcgaggcgagggcctctactcgccatggcga 22237978  T
Q  100 gttcaggtgtaactcccaaaaatccattcttaaactattccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaa 198  Q
    ||||| ||| ||||| ||||| || ||||  |||   ||||||||| |||||||||||  ||||||| |||| |||||||| | | ||||||||||||||    
T  22237979 gttcaagtgcaactcacaaaattc-attccaaaatctttccaggtttaatctcattctccaatctttcctaaccattattagacatgttcaggcactcaa 22238077  T
Q  199 aaacctctaagg 210  Q
    |||  |||||||    
T  22238078 aaatatctaagg 22238089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 103 - 220
Target Start/End: Original strand, 43697712 - 43697830
Alignment:
Q  103 caggtgtaactcccaaaaatccattcttaaactattccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaa 201  Q
    |||||||||||||| |||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||| | || | | |||||||||||||||||    
T  43697712 caggtgtaactcccgaaaatccattcttaaactattccaggttaaatctcaatctagaatcttttctaatcataaatagacatgttcaggcactcaaaaa 43697811  T
Q  202 cctctaaggtccaacttaa 220  Q
    | |||||||| ||||||||    
T  43697812 catctaaggttcaacttaa 43697830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 210
Target Start/End: Original strand, 21754286 - 21754495
Alignment:
Q  1 aactcacatcaactcgtgcgacaagtatcgcatttaacctaacaaagaattctgtaactgggtaactcgcgaggcgatggcctctactcgccatggcgag 100  Q
    ||||||||||||||||||||||||| ||| ||||||||||||||| | | |||||||       |||||||||||||  |||||| ||||||||||||||    
T  21754286 aactcacatcaactcgtgcgacaaggatcacatttaacctaacaaggcagtctgtaaaacaagtactcgcgaggcgagagcctctgctcgccatggcgag 21754385  T
Q  101 ttcaggtgtaactcccaaaaatccattcttaaactatt-ccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaa 198  Q
    ||||||| | | | |  ||||| ||||| |||| | || |||||||||||||| ||||  ||||||| ||||||||||||| | | ||||||||||||||    
T  21754386 ttcaggt-tcagttcacaaaattcattc-taaagtcttcccaggttcaatctctttctccaatctttcctaatcattattagacatgttcaggcactcaa 21754483  T
Q  199 aaacctctaagg 210  Q
    |||| |||||||    
T  21754484 aaacatctaagg 21754495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 100
Target Start/End: Original strand, 49261590 - 49261690
Alignment:
Q  1 aactcacatcaactcgtgcgacaagtatcgcatttaacctaa-caaagaattctgtaactgggtaactcgcgaggcgatggcctctactcgccatggcga 99  Q
    ||||||||||||||||||||||||  ||||| |||||||||| ||| | ||||||||||||| || ||||||||||||  ||||||| ||||||||||||    
T  49261590 aactcacatcaactcgtgcgacaaagatcgcttttaacctaaacaaggcattctgtaactggttagctcgcgaggcgagagcctctattcgccatggcga 49261689  T
Q  100 g 100  Q
    |    
T  49261690 g 49261690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 56 - 210
Target Start/End: Original strand, 433312 - 433467
Alignment:
Q  56 aactgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactcccaaaaatccattcttaaactattccaggttcaatctcatt 155  Q
    |||||||| |||||||||||||  |||||| |||||||||||||||||||||   | |||||||  | |||||| |||   |||||||||||||||||||    
T  433312 aactgggtcactcgcgaggcgagagcctctgctcgccatggcgagttcaggtcagattcccaaagtttcattctaaaatctttccaggttcaatctcatt 433411  T
Q  156 ctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaagg 210  Q
    ||| | ||||| |||||||||| || | | |||||| ||||||||| | |||||||    
T  433412 ctacattctttcctaatcattaatagacatgttcagacactcaaaagcatctaagg 433467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 58 - 199
Target Start/End: Complemental strand, 50210027 - 50209885
Alignment:
Q  58 ctgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactcccaaaaatc-cattcttaaactattccaggttcaatctcattc 156  Q
    |||||| |||||||||||||  |||||| |||||| ||||||||||||||   | | |||||| |  |||||| || || ||||||||||||||||||||    
T  50210027 ctgggtcactcgcgaggcgagagcctctgctcgccgtggcgagttcaggtcagaattccaaaagtttcattctaaatct-ttccaggttcaatctcattc 50209929  T
Q  157 tagaatcttttctaatcattattacata-gttcaggcactcaaa 199  Q
    || | ||||| ||||||||||||| | | |||||||||||||||    
T  50209928 tacattctttcctaatcattattagacatgttcaggcactcaaa 50209885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 116 - 233
Target Start/End: Complemental strand, 21861250 - 21861132
Alignment:
Q  116 caaaaatccattcttaaactattccaggttcaatctcattctagaatcttttctaatcattattaca-tagttcaggcactcaaaaacctctaaggtcca 214  Q
    |||||||||||| ||||||| | ||||||||||||||| |||| || |||  ||||||||||||| | | ||||||||||||| || | ||||| |  ||    
T  21861250 caaaaatccatttttaaactttcccaggttcaatctcaatctaaaaacttgcctaatcattattatacttgttcaggcactcagaatcatctaaagatca 21861151  T
Q  215 acttaaggggcaaaactac 233  Q
    ||||||||| |||||||||    
T  21861150 acttaagggtcaaaactac 21861132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 49 - 106
Target Start/End: Original strand, 26065238 - 26065295
Alignment:
Q  49 attctgtaactgggtaactcgcgaggcgatggcctctactcgccatggcgagttcagg 106  Q
    |||||||||||||| ||||||||||||||  |||||||||||| ||||||||||||||    
T  26065238 attctgtaactgggcaactcgcgaggcgagagcctctactcgctatggcgagttcagg 26065295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 105
Target Start/End: Complemental strand, 21861439 - 21861335
Alignment:
Q  1 aactcacatcaactcgtgcgacaagtatcgcatttaacctaacaaagaattctgtaactgggtaactcgcgaggcgatggcctctactcgccatggcgag 100  Q
    |||||||||||||||||||||||| | || ||||||||||||||| | |||||||  |      || |||||||||| ||||||||||||| ||||||||    
T  21861439 aactcacatcaactcgtgcgacaaatgtcacatttaacctaacaaggcattctgtctcacaaggacacgcgaggcgagggcctctactcgctatggcgag 21861340  T
Q  101 ttcag 105  Q
    |||||    
T  21861339 ttcag 21861335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 58 - 209
Target Start/End: Original strand, 34510087 - 34510239
Alignment:
Q  58 ctgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactcccaaaaatccattcttaaactattccaggttcaatctcattct 157  Q
    |||||| ||||| |||||||  |||||| |||||| ||||||||||||||   | | |||||| | ||||||  ||   |||||||||||||||||| ||    
T  34510087 ctgggtcactcgtgaggcgagagcctctgctcgccgtggcgagttcaggtcagatttccaaaagttcattctacaatctttccaggttcaatctcatcct 34510186  T
Q  158 agaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaag 209  Q
    | | ||||| ||||||||||||| | | |||||||||||||||| | ||||||    
T  34510187 acattctttcctaatcattattagacatgttcaggcactcaaaagcatctaag 34510239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 116 - 233
Target Start/End: Complemental strand, 21895989 - 21895870
Alignment:
Q  116 caaaaatccattctt-aaactattccaggttcaatctcattctagaatcttttctaatcattattaca-tagttcaggcactcaaaaacctctaaggtcc 213  Q
    |||||||||||| || ||||| | ||||||||||||||| |||| || |||| ||||||||||||| | | ||||||||||||| || | ||||| |  |    
T  21895989 caaaaatccattttttaaactttcccaggttcaatctcaatctaaaaactttcctaatcattattatacttgttcaggcactcataatcatctaaagatc 21895890  T
Q  214 aacttaaggggcaaaactac 233  Q
    |||||||||| |||||||||    
T  21895889 aacttaagggtcaaaactac 21895870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 116 - 233
Target Start/End: Original strand, 16759091 - 16759209
Alignment:
Q  116 caaaaatccattcttaaactattccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaaggtcca 214  Q
    |||||||||||  ||||||| |  |||||||||||||| |||| || |||  ||||||||||||| |   ||| |||||||||||||| |||||||| |     
T  16759091 caaaaatccatctttaaactttctcaggttcaatctcaatctaaaaacttgcctaatcattattatacgtgtttaggcactcaaaaacatctaaggttcg 16759190  T
Q  215 acttaaggggcaaaactac 233  Q
    ||||||||| |||||||||    
T  16759191 acttaagggtcaaaactac 16759209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 136 - 217
Target Start/End: Complemental strand, 22355921 - 22355839
Alignment:
Q  136 attccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaaggtccaact 217  Q
    ||||||||||||||||||| ||| | ||||| ||||||||||||| | | |||||||||||||||| | |||||||| |||||    
T  22355921 attccaggttcaatctcatcctacattctttcctaatcattattagacatgttcaggcactcaaaagcatctaaggttcaact 22355839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 136 - 217
Target Start/End: Complemental strand, 22357607 - 22357525
Alignment:
Q  136 attccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaaggtccaact 217  Q
    ||||||||||||||||||| ||| | ||||| ||||||||||||| | | |||||||||||||||| | |||||||| |||||    
T  22357607 attccaggttcaatctcatcctacattctttcctaatcattattagacatgttcaggcactcaaaagcatctaaggttcaact 22357525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 116 - 233
Target Start/End: Original strand, 21342513 - 21342631
Alignment:
Q  116 caaaaatccattcttaaactattccaggttcaatctcattctagaatcttttctaatcattatta--catagttcaggcactcaaaaacctctaaggtcc 213  Q
    |||||||||||| | ||| | | ||||||||| ||||| |||| || |||  |||||||||||||  |||| ||||| ||||||||| | |||||||| |    
T  21342513 caaaaatccattttaaaattttcccaggttcattctcaatctaaaaacttgcctaatcattattatacata-ttcagacactcaaaatcatctaaggttc 21342611  T
Q  214 aacttaaggggcaaaactac 233  Q
    |||||||||| |||||||||    
T  21342612 aacttaagggtcaaaactac 21342631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 116 - 233
Target Start/End: Original strand, 21347378 - 21347496
Alignment:
Q  116 caaaaatccattcttaaactattccaggttcaatctcattctagaatcttttctaatcattatta--catagttcaggcactcaaaaacctctaaggtcc 213  Q
    |||||||||||| | ||| | | ||||||||| ||||| |||| || |||  |||||||||||||  |||| ||||| ||||||||| | |||||||| |    
T  21347378 caaaaatccattttaaaattttcccaggttcattctcaatctaaaaacttgcctaatcattattatacata-ttcagacactcaaaatcatctaaggttc 21347476  T
Q  214 aacttaaggggcaaaactac 233  Q
    |||||||||| |||||||||    
T  21347477 aacttaagggtcaaaactac 21347496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 59 - 210
Target Start/End: Original strand, 22532577 - 22532729
Alignment:
Q  59 tgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactcccaaaaatccattcttaaactattccaggttcaatctcattcta 158  Q
    ||||| |||||||||||||  |||||| ||| || ||||||||||| ||   | | |||||| | ||||||  ||   |||||||||||||||||| |||    
T  22532577 tgggtcactcgcgaggcgagagcctctgctcaccgtggcgagttcaagtcagatttccaaaagttcattctacaatccttccaggttcaatctcatccta 22532676  T
Q  159 gaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaagg 210  Q
     | ||||| ||||||||||||| | | |||||||||||||||| | |||||||    
T  22532677 cattctttcctaatcattattagacatgttcaggcactcaaaagcatctaagg 22532729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 114 - 197
Target Start/End: Original strand, 26065357 - 26065441
Alignment:
Q  114 cccaaaaatccattcttaaactattccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactca 197  Q
    |||||||||||||| ||||||| | ||||||||||||||| |||| || |||  ||||||||||||| | | |||||||||||||    
T  26065357 cccaaaaatccatttttaaactttcccaggttcaatctcaatctaaaaacttgcctaatcattattatacatgttcaggcactca 26065441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 136 - 217
Target Start/End: Complemental strand, 27250476 - 27250394
Alignment:
Q  136 attccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaaggtccaact 217  Q
    ||||||||||||||| ||| ||| | ||||| ||||||||||||| | | |||||||||||||||| | |||||||| |||||    
T  27250476 attccaggttcaatcccatcctacattctttcctaatcattattagacatgttcaggcactcaaaagcatctaaggttcaact 27250394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 53 - 99
Target Start/End: Complemental strand, 35260898 - 35260852
Alignment:
Q  53 tgtaactgggtaactcgcgaggcgatggcctctactcgccatggcga 99  Q
    |||||||||| |||||||||||||| ||||||||||||| |||||||    
T  35260898 tgtaactgggaaactcgcgaggcgagggcctctactcgctatggcga 35260852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 114 - 180
Target Start/End: Original strand, 50687031 - 50687097
Alignment:
Q  114 cccaaaaatccattcttaaactattccaggttcaatctcattctagaatcttttctaatcattatta 180  Q
    |||||||||||||| ||||||| | ||||||||||||||| |||| || |||  |||||||||||||    
T  50687031 cccaaaaatccatttttaaactttcccaggttcaatctcaatctaaaaacttgcctaatcattatta 50687097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 114 - 200
Target Start/End: Complemental strand, 16367968 - 16367881
Alignment:
Q  114 cccaaaaatccattcttaaactattccaggttcaatctcattctagaatcttttctaatcattat--tacatagttcaggcactcaaaa 200  Q
    |||||||||||||  ||||||| ||||||||||| ||||| |||| || |||  |||||||||||  |||||| |||||||||||||||    
T  16367968 cccaaaaatccatctttaaacttttccaggttcattctcaatctaaaaacttgcctaatcattattatacata-ttcaggcactcaaaa 16367881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 140 - 200
Target Start/End: Original strand, 20918990 - 20919051
Alignment:
Q  140 caggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaa 200  Q
    ||||||||||||||||||| | ||||| ||||||||||||| | | ||||||||||||||||    
T  20918990 caggttcaatctcattctacattctttcctaatcattattagacatgttcaggcactcaaaa 20919051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 105
Target Start/End: Original strand, 12271798 - 12271902
Alignment:
Q  1 aactcacatcaactcgtgcgacaagtatcgcatttaacctaacaaagaattctgtaactgggtaactcgcgaggcgatggcctctactcgccatggcgag 100  Q
    ||||||||||||||||||||||||   || ||||||||||||||| | |||||||  |      |||||||||||||  |||||||||||| |||| |||    
T  12271798 aactcacatcaactcgtgcgacaaaggtcacatttaacctaacaaggcattctgtctcacaaggactcgcgaggcgagagcctctactcgctatggagag 12271897  T
Q  101 ttcag 105  Q
    |||||    
T  12271898 ttcag 12271902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 49 - 105
Target Start/End: Original strand, 16758949 - 16759005
Alignment:
Q  49 attctgtaactgggtaactcgcgaggcgatggcctctactcgccatggcgagttcag 105  Q
    ||||||||||| || ||||||||||| || |||||||||| || |||||||||||||    
T  16758949 attctgtaactaggcaactcgcgaggtgagggcctctacttgctatggcgagttcag 16759005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 114 - 197
Target Start/End: Complemental strand, 35260813 - 35260729
Alignment:
Q  114 cccaaaaatccattcttaaactattccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactca 197  Q
    |||||||||||||| ||||||| |  |||||||||||||| |||| || |||  ||||||||||||| | | |||||||||||||    
T  35260813 cccaaaaatccatttttaaactttctcaggttcaatctcaatctaaaaacttgcctaatcattattatacatgttcaggcactca 35260729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 136 - 210
Target Start/End: Complemental strand, 20846966 - 20846891
Alignment:
Q  136 attccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaagg 210  Q
    ||||||||||||||||||| ||| | ||||  ||||||||||||| | | |||||||||||||||| | |||||||    
T  20846966 attccaggttcaatctcatcctacattcttacctaatcattattagacatgttcaggcactcaaaagcatctaagg 20846891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 114 - 220
Target Start/End: Complemental strand, 41049726 - 41049619
Alignment:
Q  114 cccaaaaatccattcttaaactattccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaaggtc 212  Q
    ||||||||| |||| | ||||| | ||||||||||||||| |||| || |||  |||| |||||||| | | ||||||||||||| |||| ||||||||     
T  41049726 cccaaaaattcattttcaaactttcccaggttcaatctcaatctaaaaacttgcctaaccattattatacatgttcaggcactcagaaacatctaaggtt 41049627  T
Q  213 caacttaa 220  Q
    | ||||||    
T  41049626 cgacttaa 41049619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 136 - 217
Target Start/End: Complemental strand, 38801138 - 38801056
Alignment:
Q  136 attccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaaggtccaact 217  Q
    ||||||||||||||| ||| ||| | ||||| ||||||||||||| | | ||||||||||||||| || ||||| || |||||    
T  38801138 attccaggttcaatcacatcctacattctttcctaatcattattagacatgttcaggcactcaaagacatctaaagttcaact 38801056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 65 - 107
Target Start/End: Complemental strand, 38801199 - 38801157
Alignment:
Q  65 actcgcgaggcgatggcctctactcgccatggcgagttcaggt 107  Q
    |||||||||||||  ||||||||||||| ||||||||||||||    
T  38801199 actcgcgaggcgagagcctctactcgccgtggcgagttcaggt 38801157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 58 - 107
Target Start/End: Complemental strand, 22354387 - 22354338
Alignment:
Q  58 ctgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggt 107  Q
    |||||| ||| |||||||||  ||||||||||||| ||||||||||||||    
T  22354387 ctgggtcacttgcgaggcgagagcctctactcgccgtggcgagttcaggt 22354338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 116 - 180
Target Start/End: Complemental strand, 16093572 - 16093508
Alignment:
Q  116 caaaaatccattcttaaactattccaggttcaatctcattctagaatcttttctaatcattatta 180  Q
    |||||||||||| || |||| ||||||||||||||||| |||| || |||  | |||||||||||    
T  16093572 caaaaatccattttttaacttttccaggttcaatctcaatctaaaaacttgccaaatcattatta 16093508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 16368156 - 16368112
Alignment:
Q  1 aactcacatcaactcgtgcgacaagtatcgcatttaacctaacaa 45  Q
    ||||||||||||||||||||||||   || |||||||||||||||    
T  16368156 aactcacatcaactcgtgcgacaaaggtcacatttaacctaacaa 16368112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 21896128 - 21896084
Alignment:
Q  1 aactcacatcaactcgtgcgacaagtatcgcatttaacctaacaa 45  Q
    ||||||||||||||||||||||||   || |||||||||||||||    
T  21896128 aactcacatcaactcgtgcgacaaaggtcacatttaacctaacaa 21896084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 66 - 178
Target Start/End: Original strand, 24087730 - 24087842
Alignment:
Q  66 ctcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactcccaaaaatccattcttaaactattccaggttcaatctcattctagaatctt 165  Q
    ||||||||||||  |||||||||||||| ||||||||  |||  ||| | ||| |||||||||| |  |||||||  ||||||||||| |||| ||  ||    
T  24087730 ctcgcgaggcgagagcctctactcgccacggcgagttagggtaaaacactcaagaatccattctgactctattccgagttcaatctcagtctaaaacttt 24087829  T
Q  166 ttctaatcattat 178  Q
      |||||||||||    
T  24087830 gcctaatcattat 24087842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 98; Significance: 2e-48; HSPs: 26)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 49 - 233
Target Start/End: Complemental strand, 23708441 - 23708257
Alignment:
Q  49 attctgtaactgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactcccaaaaatccattcttaaactattccaggttcaa 148  Q
    |||||||||||||||||||||| ||||||  |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| | |||||    
T  23708441 attctgtaactgggtaactcgcaaggcgagagcctctactcgctatggcgagttcaggtgtaactcccaaaaatccattcttaaactattcc-gattcaa 23708343  T
Q  149 tctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaaggtccaacttaaggggcaaaactac 233  Q
    ||||| ||||  | |||| |||||||||| |||||| |||||| ||||||||||| ||||| |  ||||| ||||| |||||||||    
T  23708342 tctcaatctacgaactttcctaatcattaatacatatgttcagacactcaaaaacatctaaagatcaactcaagggtcaaaactac 23708257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 49 - 217
Target Start/End: Original strand, 25176140 - 25176309
Alignment:
Q  49 attctgtaactgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactcccaaaaatccattcttaaactattccaggttcaa 148  Q
    |||||||||||| | |  ||||||||||| ||||||||||||||||||||||||||||| |||||| ||||||||  |||||||||||||||||||||||    
T  25176140 attctgtaactgcgcagttcgcgaggcgagggcctctactcgccatggcgagttcaggtctaactctcaaaaatctgttcttaaactattccaggttcaa 25176239  T
Q  149 tctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaaggtccaact 217  Q
    ||||| |||  || |||| |||||||| |||| | | |||||||||||||||||| |||||||| |||||    
T  25176240 tctcaatctccaacctttcctaatcataattagacatgttcaggcactcaaaaacatctaaggttcaact 25176309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 106
Target Start/End: Original strand, 23207529 - 23207634
Alignment:
Q  1 aactcacatcaactcgtgcgacaagtatcgcatttaacctaacaaagaattctgtaactgggtaactcgcgaggcgatggcctctactcgccatggcgag 100  Q
    ||||||||||||||||||||||||   || ||||||||||||||| |  ||||||||||||| ||||||| ||||||  |||||||||||| ||||||||    
T  23207529 aactcacatcaactcgtgcgacaaaggtcacatttaacctaacaaggtgttctgtaactgggcaactcgcaaggcgagagcctctactcgctatggcgag 23207628  T
Q  101 ttcagg 106  Q
    ||||||    
T  23207629 ttcagg 23207634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 200
Target Start/End: Original strand, 28406228 - 28406429
Alignment:
Q  1 aactcacatcaactcgtgcgacaagtatcgcatttaacct-aacaaagaattctgtaactgggtaactcgcgaggcgatggcctctactcgccatggcga 99  Q
    ||||||||||||||||||||||||| |||||||||||||| ||||| | ||| ||||||      ||| |||||||||  ||||||||||||||||||||    
T  28406228 aactcacatcaactcgtgcgacaaggatcgcatttaacctaaacaaggcattatgtaacacaagtacttgcgaggcgagagcctctactcgccatggcga 28406327  T
Q  100 gttcaggtgtaactcccaaaaatccattcttaaactattccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaa 198  Q
    ||||||||  |  || ||||| |  ||||| |||   || ||||||||||||||||||  ||||||| ||||| ||||||| | | ||||||||||||||    
T  28406328 gttcaggttcagttcacaaaattttattctaaaatctttacaggttcaatctcattctccaatctttcctaattattattagacatgttcaggcactcaa 28406427  T
Q  199 aa 200  Q
    ||    
T  28406428 aa 28406429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 36 - 220
Target Start/End: Original strand, 23076726 - 23076910
Alignment:
Q  36 aacctaacaaagaattctgtaactgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactcccaaaaatccattcttaaact 135  Q
    |||||||||| | | |||||  ||||||||||||||||||||  ||||||||||||| ||||||||||||||   | | |||||  | |||||| || ||    
T  23076726 aacctaacaaggcactctgtttctgggtaactcgcgaggcgagagcctctactcgccgtggcgagttcaggtcagaattccaaagtttcattctaaatct 23076825  T
Q  136 attccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaaggtccaacttaa 220  Q
     |||||||| ||||||||| ||| | ||||| ||||| ||||||| | | |||||||||||||||| | |||||||  ||||||||    
T  23076826 -ttccaggtccaatctcatcctacattctttcctaattattattagacatgttcaggcactcaaaagcatctaaggatcaacttaa 23076910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 36 - 210
Target Start/End: Original strand, 23660307 - 23660482
Alignment:
Q  36 aacctaacaaagaattctgtaactgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactcccaaaaatccattcttaaact 135  Q
    |||||||||| | | |||||  |||||| |||| ||||||||  |||||| |||||| ||||||||||||||   | ||| |||  | |||||| |||      
T  23660307 aacctaacaaggcactctgtttctgggtcactcacgaggcgagagcctctgctcgccgtggcgagttcaggtcagattccaaaagtttcattctaaaatc 23660406  T
Q  136 attccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaagg 210  Q
     |||||||||||||||||||||| | ||||| ||||||||||||| | | |||||||||||||||| | |||||||    
T  23660407 tttccaggttcaatctcattctacattctttcctaatcattattagacatgttcaggcactcaaaagcatctaagg 23660482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 58 - 210
Target Start/End: Complemental strand, 298629 - 298476
Alignment:
Q  58 ctgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactcccaaaaatc-cattcttaaactattccaggttcaatctcattc 156  Q
    |||||| |||||||||||||  ||||||||||||| ||||||||||||||   | ||||| || |  |||||| || || |||||||||||||||||| |    
T  298629 ctgggtcactcgcgaggcgagagcctctactcgccgtggcgagttcaggtcagaatcccacaagtttcattctaaatct-ttccaggttcaatctcatcc 298531  T
Q  157 tagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaagg 210  Q
    || | ||||| ||||||||||||| | | |||||||||||||||| | |||||||    
T  298530 tatattctttcctaatcattattagacatgttcaggcactcaaaagcatctaagg 298476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 210
Target Start/End: Complemental strand, 22134087 - 22133878
Alignment:
Q  1 aactcacatcaactcgtgcgacaagtatcgcatttaacctaa-caaagaattctgtaactgggtaactcgcgaggcgatggcctctactcgccatggcga 99  Q
    ||||||||||||||||||||||||  |||||||||||||||| ||| | | ||||||||      | |||||||||||  |||||| |||||||||||||    
T  22134087 aactcacatcaactcgtgcgacaaagatcgcatttaacctaaacaaggcagtctgtaacacaagtattcgcgaggcgagagcctctgctcgccatggcga 22133988  T
Q  100 gttcaggtgtaactcccaaaaatccattcttaaactattcc-aggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactca 197  Q
    |||||| |   | | |  ||||| |||||| ||| | |||| |||||||||||||||||  ||||||| ||||||||||||| | | |||||||||||||    
T  22133987 gttcagttc--agttcacaaaattcattct-aaagtcttcctaggttcaatctcattctccaatctttcctaatcattattagacatgttcaggcactca 22133891  T
Q  198 aaaacctctaagg 210  Q
    ||| | |||||||    
T  22133890 aaagcatctaagg 22133878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 140 - 217
Target Start/End: Complemental strand, 23071695 - 23071617
Alignment:
Q  140 caggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaaggtccaact 217  Q
    ||||||||||||||||||| | ||||| ||||||||||||| | | |||||||||||||||| | |||||||| |||||    
T  23071695 caggttcaatctcattctacattctttcctaatcattattagacatgttcaggcactcaaaagcatctaaggttcaact 23071617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 114 - 233
Target Start/End: Complemental strand, 18786566 - 18786446
Alignment:
Q  114 cccaaaaatccattcttaaactattccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaaggtc 212  Q
    |||||||||||||| ||||||| |  |||||||||||||| |||| || |||  ||||||| || || |   |||||||||||||||| | ||||| ||     
T  18786566 cccaaaaatccatttttaaactttctcaggttcaatctcaatctaaaaacttgcctaatcaataatatacgtgttcaggcactcaaaatcatctaaagtt 18786467  T
Q  213 caacttaaggggcaaaactac 233  Q
    ||||||||||| |||||||||    
T  18786466 caacttaagggtcaaaactac 18786446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 58 - 180
Target Start/End: Original strand, 22337422 - 22337544
Alignment:
Q  58 ctgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggt-gtaactcccaaaaatccattcttaaactattccaggttcaatctcattc 156  Q
    |||||| |||||||||||||  ||||||||||||| |||||| |||||||   |||||  |||  | |||||| || || |||||||||||||||||| |    
T  22337422 ctgggtcactcgcgaggcgagagcctctactcgccgtggcgaattcaggtcagaactcaaaaagtttcattctaaatct-ttccaggttcaatctcatcc 22337520  T
Q  157 tagaatcttttctaatcattatta 180  Q
    || | ||||| |||||||||||||    
T  22337521 tacattctttcctaatcattatta 22337544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 114 - 197
Target Start/End: Complemental strand, 22412817 - 22412733
Alignment:
Q  114 cccaaaaatccattcttaaactattccaggttcaatctcattctagaatcttttctaatcattat--tacatagttcaggcactca 197  Q
    |||||||||||||| ||||||| | ||||||||||||||| |||| || |||  |||||||||||  ||||| |||||||||||||    
T  22412817 cccaaaaatccatttttaaactttcccaggttcaatctcaatctaaaaacttgcctaatcattatcatacat-gttcaggcactca 22412733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 137 - 210
Target Start/End: Complemental strand, 22730968 - 22730894
Alignment:
Q  137 ttccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaagg 210  Q
    |||||||||||||||||| ||| | ||||| ||||||||||||| | | |||||||||||||||| | |||||||    
T  22730968 ttccaggttcaatctcatcctacattctttcctaatcattattagacatgttcaggcactcaaaagcatctaagg 22730894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 141 - 210
Target Start/End: Complemental strand, 22737911 - 22737841
Alignment:
Q  141 aggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaagg 210  Q
    |||||||||||||| ||| | ||||| ||||||||||||| ||| |||||||||||||||| | |||||||    
T  22737911 aggttcaatctcatcctacattctttcctaatcattattagatatgttcaggcactcaaaagcatctaagg 22737841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 136 - 217
Target Start/End: Complemental strand, 23654146 - 23654064
Alignment:
Q  136 attccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaaggtccaact 217  Q
    ||||||||||||||||||| ||| | ||||| ||||||||||||| | | ||||||||| |||||| | |||||||| |||||    
T  23654146 attccaggttcaatctcatcctacattctttcctaatcattattagacatgttcaggcagtcaaaagcatctaaggttcaact 23654064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 53 - 106
Target Start/End: Complemental strand, 22412953 - 22412900
Alignment:
Q  53 tgtaactgggtaactcgcgaggcgatggcctctactcgccatggcgagttcagg 106  Q
    |||||||||| ||||| ||||||||  |||||||||||| ||||||||||||||    
T  22412953 tgtaactgggcaactcacgaggcgagagcctctactcgctatggcgagttcagg 22412900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 114 - 197
Target Start/End: Original strand, 23207717 - 23207801
Alignment:
Q  114 cccaaaaatccattcttaaactattccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactca 197  Q
    |||||||||||||| ||||||| | | ||||||||||||| |||| || |||  ||||||||||||| | | |||||||||||||    
T  23207717 cccaaaaatccatttttaaactttcctaggttcaatctcaatctaaaaacttgcctaatcattattatacatgttcaggcactca 23207801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 136 - 217
Target Start/End: Original strand, 23286235 - 23286317
Alignment:
Q  136 attccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaaggtccaact 217  Q
    |||||| |||||||||||| ||| | ||||| ||||||||||||| | | |||||| ||||||||| | |||||||| |||||    
T  23286235 attccatgttcaatctcatcctacattctttcctaatcattattagacatgttcagacactcaaaagcatctaaggttcaact 23286317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 137 - 210
Target Start/End: Original strand, 27753961 - 27754035
Alignment:
Q  137 ttccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaagg 210  Q
    |||||||||||||||||| ||| | ||||| ||||||||||||| | | ||| |||||||||||| | |||||||    
T  27753961 ttccaggttcaatctcatcctacattctttcctaatcattattagacatgttgaggcactcaaaagcatctaagg 27754035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 58 - 210
Target Start/End: Complemental strand, 32451744 - 32451590
Alignment:
Q  58 ctgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactccca-aaaatccattcttaaactattccaggttcaatctcattc 156  Q
    |||||| |||||||||||||  |||||| |||||| ||||||||||||||   | ||||| ||  | ||||||  ||   ||||| |||||||||||| |    
T  32451744 ctgggtcactcgcgaggcgagagcctctgctcgccgtggcgagttcaggtcagaatcccacaagtttcattctacaatctttccatgttcaatctcatcc 32451645  T
Q  157 tagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaagg 210  Q
    || | ||| | ||||||||||||| | | |||||||||||||||| | |||||||    
T  32451644 tacattctctcctaatcattattaaacatgttcaggcactcaaaagcatctaagg 32451590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 136 - 211
Target Start/End: Complemental strand, 37863 - 37787
Alignment:
Q  136 attccaggttcaatctcattctagaatcttttc-taatcattattacata-gttcaggcactcaaaaacctctaaggt 211  Q
    ||||||||||||||||||| ||| | ||||||| |||||||||||| | | |||||||||||||||| | ||||||||    
T  37863 attccaggttcaatctcatcctaca-tcttttcctaatcattattagacatgttcaggcactcaaaagcatctaaggt 37787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 49 - 106
Target Start/End: Complemental strand, 20520014 - 20519957
Alignment:
Q  49 attctgtaactgggtaactcgcgaggcgatggcctctactcgccatggcgagttcagg 106  Q
    ||||||||||| || ||||||||||||||  |||||||| ||| ||||||| ||||||    
T  20520014 attctgtaactaggcaactcgcgaggcgagagcctctacacgctatggcgacttcagg 20519957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 136 - 180
Target Start/End: Original strand, 20309479 - 20309523
Alignment:
Q  136 attccaggttcaatctcattctagaatcttttctaatcattatta 180  Q
    ||||||||||||||||||| ||| | ||||| |||||||||||||    
T  20309479 attccaggttcaatctcatcctacattctttcctaatcattatta 20309523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 114 - 197
Target Start/End: Complemental strand, 20519874 - 20519790
Alignment:
Q  114 cccaaaaatccattcttaaactattccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactca 197  Q
    |||||||||||||| || |||| | ||| ||||||||||| |||| || |||  ||||||||||||| | | |||||||||||||    
T  20519874 cccaaaaatccattttttaactttcccatgttcaatctcaatctaaaaacttgcctaatcattattatacatgttcaggcactca 20519790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 23791526 - 23791570
Alignment:
Q  1 aactcacatcaactcgtgcgacaagtatcgcatttaacctaacaa 45  Q
    ||||||||||||||||||||||||   || |||||||||||||||    
T  23791526 aactcacatcaactcgtgcgacaaaggtcacatttaacctaacaa 23791570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 66 - 102
Target Start/End: Original strand, 31756232 - 31756268
Alignment:
Q  66 ctcgcgaggcgatggcctctactcgccatggcgagtt 102  Q
    ||||||||||||  |||||||||||||||||||||||    
T  31756232 ctcgcgaggcgagagcctctactcgccatggcgagtt 31756268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0810 (Bit Score: 94; Significance: 6e-46; HSPs: 1)
Name: scaffold0810
Description:

Target: scaffold0810; HSP #1
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 15 - 210
Target Start/End: Original strand, 3195 - 3392
Alignment:
Q  15 cgtgcgacaagtatcgcatttaacctaa-caaagaattctgtaactgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaact 113  Q
    ||||||||||  |||||||||||||||| ||| | ||||||||||| |  || || |||||||| ||||||||||||||||||||||||||||| |||||    
T  3195 cgtgcgacaaagatcgcatttaacctaaacaaggcattctgtaactagtcaattcacgaggcgagggcctctactcgccatggcgagttcaggtataact 3294  T
Q  114 cccaaaaatccattcttaaactattccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaagg 210  Q
    |||| || | | |||||||||||||||||||||||||||| |||  ||||||| ||||||||||||| | | |||||||||||||||||| |||||||    
T  3295 cccacaagttcgttcttaaactattccaggttcaatctcaatctccaatctttcctaatcattattagacatgttcaggcactcaaaaacatctaagg 3392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1984 (Bit Score: 92; Significance: 9e-45; HSPs: 1)
Name: scaffold1984
Description:

Target: scaffold1984; HSP #1
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 1 - 210
Target Start/End: Original strand, 379 - 590
Alignment:
Q  1 aactcacatcaactcgtgcgacaagtatcgcatttaacctaacaaaga-attctgtaactgggtaactcgcgaggcgatggcctctactcgccatggcga 99  Q
    ||||||||||||||||| ||||||  |||||||||||| |||  |||| ||||||||||||||| |||||||||||||  |||||| |||||||||||||    
T  379 aactcacatcaactcgtacgacaaagatcgcatttaacataagcaagacattctgtaactgggtcactcgcgaggcgagagcctctgctcgccatggcga 478  T
Q  100 gttcaggtgtaactcccaaaaatccattcttaaactattccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaa 198  Q
    ||||||||| ||||| ||||||| |||||| |||   ||||| |||||||||||||||  ||||||| ||||||||||||| | | ||| ||||||||||    
T  479 gttcaggtgcaactcacaaaaattcattctaaaatctttccaagttcaatctcattctccaatctttcctaatcattattagacatgtttaggcactcaa 578  T
Q  199 aaacctctaagg 210  Q
    |||  |||||||    
T  579 aaaagtctaagg 590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0102 (Bit Score: 92; Significance: 9e-45; HSPs: 1)
Name: scaffold0102
Description:

Target: scaffold0102; HSP #1
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 1 - 210
Target Start/End: Original strand, 19515 - 19726
Alignment:
Q  1 aactcacatcaactcgtgcgacaagtatcgcatttaacctaacaaaga-attctgtaactgggtaactcgcgaggcgatggcctctactcgccatggcga 99  Q
    |||||||||||||| |||||||||| |||||||||||| |||  |||| ||||||||||||||| | |||||||||||  |||||| |||||||||||||    
T  19515 aactcacatcaacttgtgcgacaaggatcgcatttaacataagcaagacattctgtaactgggtcattcgcgaggcgagagcctctgctcgccatggcga 19614  T
Q  100 gttcaggtgtaactcccaaaaatccattcttaaactattccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaa 198  Q
    ||||||||| ||| |  |||||| |||||| |||   |||||||||||||||||||||  |||| || ||||||||||||| | | ||||||||||||||    
T  19615 gttcaggtgcaacacataaaaattcattctaaaatctttccaggttcaatctcattctccaatccttcctaatcattattagacatgttcaggcactcaa 19714  T
Q  199 aaacctctaagg 210  Q
    |||| |||||||    
T  19715 aaacatctaagg 19726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0207 (Bit Score: 88; Significance: 2e-42; HSPs: 1)
Name: scaffold0207
Description:

Target: scaffold0207; HSP #1
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 1 - 202
Target Start/End: Complemental strand, 2515 - 2313
Alignment:
Q  1 aactcacatcaactcgtgcgacaagtatcgcatttaacctaa-caaagaattctgtaactgggtaactcgcgaggcgatggcctctactcgccatggcga 99  Q
    |||||||||||||| |||||||||  |||||||||| ||||| ||| | ||||||||||| |  || ||||||||| |||||||||||||||||||||||    
T  2515 aactcacatcaacttgtgcgacaaagatcgcatttatcctaaacaaggcattctgtaactagtcaattcgcgaggcaatggcctctactcgccatggcga 2416  T
Q  100 gttcaggtgtaactcccaaaaatccattcttaaactattccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaa 198  Q
    |||||||| ||||||||| || | | ||||| ||||| |||||||||||||||| |||  ||||||| ||||||||||||| | | ||||||||||||||    
T  2415 gttcaggtataactcccacaagtacgttctt-aactaatccaggttcaatctcaatctccaatctttcctaatcattattagacatgttcaggcactcaa 2317  T
Q  199 aaac 202  Q
    ||||    
T  2316 aaac 2313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0243 (Bit Score: 87; Significance: 9e-42; HSPs: 1)
Name: scaffold0243
Description:

Target: scaffold0243; HSP #1
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 1 - 233
Target Start/End: Complemental strand, 5993 - 5760
Alignment:
Q  1 aactcacatcaactcgtgcgacaagtatcgcatttaacctaa-caaagaattctgtaactgggtaactcgcgaggcgatggcctctactcgccatggcga 99  Q
    |||| ||||||||| | |||||||  |||||||||||||||| ||| | ||| ||||||||||||| ||||||||||| ||||||||||||| | |||||    
T  5993 aactaacatcaacttgcgcgacaaagatcgcatttaacctaaacaaggcattatgtaactgggtaattcgcgaggcgagggcctctactcgctaaggcga 5894  T
Q  100 gttcaggtgtaactcccaaaaatccattcttaaactattccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaa 198  Q
    ||||||||| || || | ||||||||| ||||||||||| | |||||||||||| |||| ||| ||| ||||||||||||| | | ||||||| ||||||    
T  5893 gttcaggtgcaaatcac-aaaatccatccttaaactattactggttcaatctcaatctacaatttttcctaatcattattatacatgttcaggtactcaa 5795  T
Q  199 aaacctctaaggtccaacttaaggggcaaaactac 233  Q
    |||| |||||| | |||||||| || |||| ||||    
T  5794 aaacatctaagattcaacttaaaggtcaaatctac 5760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0530 (Bit Score: 86; Significance: 3e-41; HSPs: 1)
Name: scaffold0530
Description:

Target: scaffold0530; HSP #1
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 1 - 233
Target Start/End: Complemental strand, 905 - 666
Alignment:
Q  1 aactcacatcaactcgtgcgacaagtatcgcatttaacctaa-caaagaattctgtaactgggtaactcgcgaggcgatggcctctactcgccatggcga 99  Q
    |||| ||||||||| | |||||||  |||||||||||||||| ||| | ||| ||||||||||||| ||||||||||| ||||||||||||| | |||||    
T  905 aactaacatcaacttgcgcgacaaagatcgcatttaacctaaacaaggcattatgtaactgggtaattcgcgaggcgagggcctctactcgctaaggcga 806  T
Q  100 gttcaggtgtaactcccaaaaatccattcttaaactattccaggt------tcaatctcattctagaatcttttctaatcattattacata-gttcaggc 192  Q
    ||||||||| ||||| | ||||||||| ||||||||||| |||||      ||||||||| |||| ||||||| ||||||||||||| | | ||||||||    
T  805 gttcaggtgcaactcac-aaaatccatccttaaactattacaggttcaatctcaatctcaatctacaatctttcctaatcattattatacatgttcaggc 707  T
Q  193 actcaaaaacctctaaggtccaacttaaggggcaaaactac 233  Q
    |||||||||| |||||| | |||||||| || |||| ||||    
T  706 actcaaaaacatctaagattcaacttaaaggtcaaatctac 666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0475 (Bit Score: 84; Significance: 5e-40; HSPs: 1)
Name: scaffold0475
Description:

Target: scaffold0475; HSP #1
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 1 - 210
Target Start/End: Original strand, 9326 - 9536
Alignment:
Q  1 aactcacatcaactcgtgcgacaagtatcgcatttaacctaacaaagaattctgtaactgggtaactcgcgaggcgatggcctctactcgccatggcgag 100  Q
    |||||||| |||||||||||||||| ||||||||||||||| ||| | ||||||||| |||||| ||||||||||||  |||||||||||||||||||||    
T  9326 aactcacaacaactcgtgcgacaaggatcgcatttaacctagcaaggcattctgtaaatgggtagctcgcgaggcgagagcctctactcgccatggcgag 9425  T
Q  101 ttcaggtgtaactcccaaaaatccattcttaaact-attccaggttcaatctcattctagaatcttttctaatcattattaca-tagttcaggcactcaa 198  Q
    |||||||  |  || ||||||| ||||| ||||||  |||||||| |||||||| |||| | ||||| |||||| |||||| | | ||||||||||||||    
T  9426 ttcaggttcagttcacaaaaattcattc-taaactctttccaggtccaatctcactctacattctttcctaatcgttattagacttgttcaggcactcaa 9524  T
Q  199 aaacctctaagg 210  Q
    || | |||||||    
T  9525 aagcatctaagg 9536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0125 (Bit Score: 76; Significance: 3e-35; HSPs: 1)
Name: scaffold0125
Description:

Target: scaffold0125; HSP #1
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 210
Target Start/End: Complemental strand, 45662 - 45450
Alignment:
Q  1 aactcacatcaactcgtgcgacaagtatcgcatttaacctaacaaaga-attctgtaactgggtaactcgcgaggcgatggcctctactcgccatggcga 99  Q
    ||||||||||||||||||||||||  |||||||||| |||||  |||| ||||||||||| | || ||||||||||||  ||||||||||||||||||||    
T  45662 aactcacatcaactcgtgcgacaaagatcgcatttatcctaaacaagacattctgtaactagttagctcgcgaggcgagagcctctactcgccatggcga 45563  T
Q  100 gttcaggtgtaactc-ccaaaaatccattcttaaactatt-ccaggttcaatctcattctagaatcttttctaatcattatt--acatagttcaggcact 195  Q
    ||||||||  || || | |||||| ||||| |||| | || ||||||||||||||||||   ||||||| ||||||||||||  ||||| ||||||||||    
T  45562 gttcaggtacaattcacaaaaaattcattc-taaagtcttaccaggttcaatctcattccccaatctttcctaatcattattagacata-ttcaggcact 45465  T
Q  196 caaaaacctctaagg 210  Q
    ||||||| |||||||    
T  45464 caaaaacatctaagg 45450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 73; Significance: 2e-33; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 210
Target Start/End: Original strand, 160934 - 161145
Alignment:
Q  1 aactcacatcaactcgtgcgacaagtatcgcatttaacctaacaaaga-attctgtaactgggtaactcgcgaggcgatggcctctactcgccatggcga 99  Q
    ||||||||||||||||||||||||  ||| |||||| |||||| |||| ||||||||||| | || |||| |||| ||  ||||||||||||||||||||    
T  160934 aactcacatcaactcgtgcgacaaagatcacatttatcctaaccaagacattctgtaactagttacctcgtgaggtgagagcctctactcgccatggcga 161033  T
Q  100 gttcaggtgtaactcccaaaaatccattcttaaactat-tccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactca 197  Q
     |||||||  |  || ||||||| ||||| |||| | | ||||||||||||||||||||  ||||||| ||||||||||||| | | |||||||||||||    
T  161034 cttcaggttcagttcacaaaaattcattc-taaagtctctccaggttcaatctcattctccaatctttcctaatcattattagacatgttcaggcactca 161132  T
Q  198 aaaacctctaagg 210  Q
    ||||| |||||||    
T  161133 aaaacatctaagg 161145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0621 (Bit Score: 71; Significance: 3e-32; HSPs: 2)
Name: scaffold0621
Description:

Target: scaffold0621; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 1 - 200
Target Start/End: Original strand, 6785 - 6987
Alignment:
Q  1 aactcacatcaactcgtgcgacaagtatcgcatttaacctaa-caaagaattctgtaactgggtaactcgcgaggcgatggcctctactcgccatggcga 99  Q
    |||||||||||||| |||||||||  |||||||||| ||||| ||| | ||| ||||||| |  || |||||||| || |||||| ||||||||||||||    
T  6785 aactcacatcaacttgtgcgacaaagatcgcatttatcctaaacaaggcattttgtaactagtcaattcgcgaggggagggcctccactcgccatggcga 6884  T
Q  100 gttcaggtgtaactccca-aaaatccattcttaaactattccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactca 197  Q
    |||||||| ||||||||| ||  | | |||||||||||||||||||||||||||| |||  ||||||| ||||| ||||||| | | || ||||||||||    
T  6885 gttcaggtataactcccacaagtttcgttcttaaactattccaggttcaatctcaatctccaatctttcctaattattattagacatgtccaggcactca 6984  T
Q  198 aaa 200  Q
    |||    
T  6985 aaa 6987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0621; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 4 - 105
Target Start/End: Original strand, 8723 - 8824
Alignment:
Q  4 tcacatcaactcgtgcgacaagtatcgcatttaacctaacaaagaattctgtaactgggtaactcgcgaggcgatggcctctactcgccatggcgagttc 103  Q
    |||||||||||||||||||||   || ||||||||||||||| | |||||||  |      ||||||||||||| ||||||||||||| |||||||||||    
T  8723 tcacatcaactcgtgcgacaaaggtcacatttaacctaacaaggcattctgtctcacaaggactcgcgaggcgagggcctctactcgctatggcgagttc 8822  T
Q  104 ag 105  Q
    ||    
T  8823 ag 8824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023 (Bit Score: 69; Significance: 5e-31; HSPs: 2)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 1 - 180
Target Start/End: Complemental strand, 40044 - 39864
Alignment:
Q  1 aactcacatcaactcgtgcgacaagtatcgcatttaacctaacaaaga-attctgtaactgggtaactcgcgaggcgatggcctctactcgccatggcga 99  Q
    ||||||||||||||||||| ||||  ||||||||||||||||  |||  ||| ||||||| | || ||||||||||||  ||||||||| |||||||| |    
T  40044 aactcacatcaactcgtgcaacaaagatcgcatttaacctaaataaggcattttgtaactagttagctcgcgaggcgagagcctctacttgccatggcaa 39945  T
Q  100 gttcaggtgtaactcccaaaaatccattcttaaactattccaggttcaatctcattctagaatcttttctaatcattatta 180  Q
    |||||||| ||||||||| || | | |||||||||||||||||||| ||| ||| |||  ||||||| |||| ||||||||    
T  39944 gttcaggtataactcccacaagttcgttcttaaactattccaggttgaatgtcaatctccaatctttcctaaccattatta 39864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #2
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 210
Target Start/End: Original strand, 101644 - 101854
Alignment:
Q  1 aactcacatcaactcgtgcgacaagtatcgcatttaacctaacaaaga-attctgtaactgggtaactcgcgaggcgatggcctctactcgccatggcga 99  Q
    ||||||||||||||||||||||||| ||| ||||||||||||  |||| | ||| ||||      |||| |||||| |  |||||| |||||||||||||    
T  101644 aactcacatcaactcgtgcgacaaggatcacatttaacctaaacaagacagtctataacacaagtactcccgaggcaagagcctctgctcgccatggcga 101743  T
Q  100 gttcaggtgtaactcccaaaaatccattcttaaactat-tccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactca 197  Q
    ||||||||  |  || ||||| || ||||| ||| | | ||||||||||||||||||||  ||||||| ||||||||||||| | | |||||||||||||    
T  101744 gttcaggtcaagttcacaaaattc-attct-aaagtctctccaggttcaatctcattctccaatctttcctaatcattattagacatgttcaggcactca 101841  T
Q  198 aaaacctctaagg 210  Q
    ||||| |||||||    
T  101842 aaaacttctaagg 101854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 66; Significance: 3e-29; HSPs: 2)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 108 - 200
Target Start/End: Original strand, 227849 - 227942
Alignment:
Q  108 gtaactcccaaaaatccattcttaaactattccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaa 200  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||| | | ||| ||||||||||||    
T  227849 gtaactcccaaaaatccattcttaaactattccaggttcaatctcaatctagaatctttcctaatcattattatacatgtttaggcactcaaaa 227942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 49 - 113
Target Start/End: Original strand, 225705 - 225769
Alignment:
Q  49 attctgtaactgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaact 113  Q
    |||||||||||  |||||||||||||| | |||||||||| |  ||||||| |||||||||||||    
T  225705 attctgtaactatgtaactcgcgaggcaagggcctctacttgttatggcgatttcaggtgtaact 225769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0555 (Bit Score: 65; Significance: 1e-28; HSPs: 2)
Name: scaffold0555
Description:

Target: scaffold0555; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 129
Target Start/End: Complemental strand, 10411 - 10283
Alignment:
Q  1 aactcacatcaactcgtgcgacaagtatcgcatttaacctaacaaagaattctgtaactgggtaactcgcgaggcgatggcctctactcgccatggcgag 100  Q
    ||||||||||||||||||| ||||  ||||||||||||||||||| | | | |||||| ||  ||||||||||||||  ||||||||||||  |||||||    
T  10411 aactcacatcaactcgtgcaacaaagatcgcatttaacctaacaaggcagtatgtaacaggacaactcgcgaggcgagagcctctactcgctttggcgag 10312  T
Q  101 ttcaggtgtaactcccaaaaatccattct 129  Q
    |||||||||||||| ||||||| ||||||    
T  10311 ttcaggtgtaactcacaaaaattcattct 10283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0555; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 151 - 211
Target Start/End: Complemental strand, 10289 - 10228
Alignment:
Q  151 tcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaaggt 211  Q
    |||||||| ||||||| ||||||||||||| | | |||||||||||||||||| ||||||||    
T  10289 tcattctaaaatctttactaatcattattagacatgttcaggcactcaaaaacatctaaggt 10228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0218 (Bit Score: 62; Significance: 7e-27; HSPs: 2)
Name: scaffold0218
Description:

Target: scaffold0218; HSP #1
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 1 - 106
Target Start/End: Complemental strand, 7946 - 7841
Alignment:
Q  1 aactcacatcaactcgtgcgacaagtatcgcatttaacctaacaaagaattctgtaactgggtaactcgcgaggcgatggcctctactcgccatggcgag 100  Q
    ||||||||||||||||||||||||  |||||||||| |||||||| | ||| |||||||||| ||||||||||||||  |||| ||||||| ||||||||    
T  7946 aactcacatcaactcgtgcgacaaagatcgcatttaccctaacaaggcattttgtaactgggcaactcgcgaggcgagagcctttactcgctatggcgag 7847  T
Q  101 ttcagg 106  Q
    ||||||    
T  7846 ttcagg 7841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0218; HSP #2
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 141 - 216
Target Start/End: Complemental strand, 29011 - 28935
Alignment:
Q  141 aggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaaggtccaac 216  Q
    |||||||||||||||||| | ||||| ||||||||||||| | | |||||||||||||||| | |||||||| ||||    
T  29011 aggttcaatctcattctacattctttcctaatcattattagacatgttcaggcactcaaaagcatctaaggttcaac 28935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0211 (Bit Score: 61; Significance: 3e-26; HSPs: 1)
Name: scaffold0211
Description:

Target: scaffold0211; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 210
Target Start/End: Complemental strand, 28681 - 28470
Alignment:
Q  1 aactcacatcaactcgtgcgacaagtatcgcatttaacctaa-caaagaattctgtaactgggtaactcgcgaggcgatggcctctactcgccatggcga 99  Q
    ||||||||||||||||||||||||  |||||||||||||||| ||| | ||||||||||      |||||||||||||  |||||| |||||||||||||    
T  28681 aactcacatcaactcgtgcgacaaagatcgcatttaacctaaacaaggcattctgtaacacaagtactcgcgaggcgagagcctctgctcgccatggcga 28582  T
Q  100 gttcaggtgtaactcccaaaaatccattcttaaactattcc-aggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactca 197  Q
    ||||||||  |  || ||||| | |||||| ||| | |||  |||||||||||||||||  ||||||| ||||||||||||| | | |||||||||||||    
T  28581 gttcaggttcagttcacaaaatttcattct-aaagtcttcgtaggttcaatctcattctccaatctttcctaatcattattagacatgttcaggcactca 28483  T
Q  198 aaaacctctaagg 210  Q
    ||| | |||||||    
T  28482 aaagcatctaagg 28470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 60; Significance: 1e-25; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 210
Target Start/End: Original strand, 132902 - 133113
Alignment:
Q  1 aactcacatcaactcgtgcgacaagtatcgcatttaacctaa-caaagaattctgtaactgggtaactcgcgaggcgatggcctctactcgccatggcga 99  Q
    ||||||||||||||||||||||||  ||| |||||||||||| ||| | ||| |||||       |||||||||||||  |||||| |||||||||||||    
T  132902 aactcacatcaactcgtgcgacaaagatcacatttaacctaaacaaggcattatgtaagacaagtactcgcgaggcgagagcctctgctcgccatggcga 133001  T
Q  100 gttcaggtgtaactcccaaaaatccattcttaaactattccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaa 198  Q
    ||||||||  |  || ||||| | |||||| ||    |||||||||||||||||||||  ||||||| ||||||||||||| | | ||||||||||||||    
T  133002 gttcaggttcagttcacaaaatttcattctaaagtctttccaggttcaatctcattctccaatctttcctaatcattattagacatgttcaggcactcaa 133101  T
Q  199 aaacctctaagg 210  Q
    |||| |||||||    
T  133102 aaacatctaagg 133113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0320 (Bit Score: 59; Significance: 4e-25; HSPs: 1)
Name: scaffold0320
Description:

Target: scaffold0320; HSP #1
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 84 - 233
Target Start/End: Original strand, 12329 - 12478
Alignment:
Q  84 ctactcgccatggcgagttcaggtgtaactcccaaaaatccattcttaaactattccaggttcaatctcattctagaatcttttctaatcattattacat 183  Q
    |||||||| ||||| | ||||| ||||||||| |||||||||||||||| |||||||||||||||||||| |||| ||||||| ||||||||||||| |     
T  12329 ctactcgctatggcaaattcagttgtaactccaaaaaatccattcttaa-ctattccaggttcaatctcaatctaaaatctttcctaatcattattatac 12427  T
Q  184 a-gttcaggcactcaaaaacctctaaggtccaacttaaggggcaaaactac 233  Q
    | |||||| ||||||||| | |||||    ||||||||||  |||||||||    
T  12428 atgttcagacactcaaaatcatctaaatatcaacttaaggatcaaaactac 12478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0839 (Bit Score: 57; Significance: 7e-24; HSPs: 1)
Name: scaffold0839
Description:

Target: scaffold0839; HSP #1
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 49 - 200
Target Start/End: Complemental strand, 1900 - 1748
Alignment:
Q  49 attctgtaactgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactcccaaaaatccattcttaaactattccaggttcaa 148  Q
    ||||||||||||||| |||||||||||||  |||||| ||||||||||||| |||||||   | | |||||  | |||||| |||   ||||||||||||    
T  1900 attctgtaactgggtcactcgcgaggcgagagcctctgctcgccatggcgaattcaggtcagatttccaaagtttcattctaaaatctttccaggttcaa 1801  T
Q  149 tctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaa 200  Q
    |||||||||| | ||||| ||||||||||||| | | ||||||||||||||||    
T  1800 tctcattctacattctttcctaatcattattagacatgttcaggcactcaaaa 1748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228 (Bit Score: 55; Significance: 1e-22; HSPs: 3)
Name: scaffold0228
Description:

Target: scaffold0228; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 58 - 210
Target Start/End: Original strand, 4814 - 4968
Alignment:
Q  58 ctgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactcccaaaaatccattcttaaactatt-ccaggttcaatctcattc 156  Q
    |||||| |||||||| ||||  |||||| |||||||||||||||||||||   | |||||||  | |||||| ||| | || ||||||||||||||||||    
T  4814 ctgggtcactcgcgaagcgagagcctctgctcgccatggcgagttcaggtcagattcccaaagtttcattctaaaaatctttccaggttcaatctcattc 4913  T
Q  157 tagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaagg 210  Q
    || | ||||||||||||||||||| | | |||||||||||||||| | |||||||    
T  4914 tacattcttttctaatcattattagacatgttcaggcactcaaaagcatctaagg 4968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 58 - 210
Target Start/End: Original strand, 12396 - 12550
Alignment:
Q  58 ctgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactcccaaaaatccattcttaaactatt-ccaggttcaatctcattc 156  Q
    |||||| |||||||| ||||  |||||| |||||||||||||||||||||   | |||||||  | |||||| ||| | || ||||||||||||||||||    
T  12396 ctgggtcactcgcgaagcgagagcctctgctcgccatggcgagttcaggtcagattcccaaagtttcattctaaaaatctttccaggttcaatctcattc 12495  T
Q  157 tagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaagg 210  Q
    || | ||||||||||||||||||| | | |||||||||||||||| | |||||||    
T  12496 tacattcttttctaatcattattagacatgttcaggcactcaaaagcatctaagg 12550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228; HSP #3
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 58 - 210
Target Start/End: Original strand, 22348 - 22502
Alignment:
Q  58 ctgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactcccaaaaatccattcttaaactatt-ccaggttcaatctcattc 156  Q
    |||||| |||||||| ||||  |||||| |||||||||||||||||||||   | |||||||  | |||||| ||| | || ||||||||||||||||||    
T  22348 ctgggtcactcgcgaagcgagagcctctgctcgccatggcgagttcaggtcagattcccaaagtttcattctaaaaatctttccaggttcaatctcattc 22447  T
Q  157 tagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaagg 210  Q
    || | ||||||||||||||||||| | | |||||||||||||||| | |||||||    
T  22448 tacattcttttctaatcattattagacatgttcaggcactcaaaagcatctaagg 22502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0150 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0150
Description:

Target: scaffold0150; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 8 - 210
Target Start/End: Original strand, 32339 - 32543
Alignment:
Q  8 atcaactcgtgcgacaagtatcgcatttaacctaa-caaagaattctgtaactgggtaactcgcgaggcgatggcctctactcgccatggcgagttcagg 106  Q
    ||||||| |||||||||  |||||||||||||||| ||| | ||| ||||||      |||||||||| ||  |||||| ||||||||||||||||||||    
T  32339 atcaactagtgcgacaaagatcgcatttaacctaaacaaggcattatgtaacacaagtactcgcgaggtgagagcctctgctcgccatggcgagttcagg 32438  T
Q  107 tgtaactcccaaaaatccattcttaaactattccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctc 205  Q
    |  |  || ||||| | |||||| ||    |||||||||||||||||||||  ||||||| ||||||||||||| | | |||||||||||||||||| ||    
T  32439 ttcagttcacaaaatttcattctaaagtctttccaggttcaatctcattctccaatctttcctaatcattattagacatgttcaggcactcaaaaacatc 32538  T
Q  206 taagg 210  Q
    |||||    
T  32539 taagg 32543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0503 (Bit Score: 52; Significance: 7e-21; HSPs: 1)
Name: scaffold0503
Description:

Target: scaffold0503; HSP #1
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 50 - 210
Target Start/End: Original strand, 12228 - 12388
Alignment:
Q  50 ttctgtaactgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactcccaaaaatccattcttaaactattccaggttcaat 149  Q
    |||||||| |||| ||||||||||| ||  ||||||||||||||||||||||||||||     ||| |||| | ||||||| || || ||||||||||||    
T  12228 ttctgtaattgggcaactcgcgaggtgagagcctctactcgccatggcgagttcaggtcagtttccaaaaagttcattctt-aattaatccaggttcaat 12326  T
Q  150 ctcattctagaatcttttctaatcattatt--acatagttcaggcactcaaaaacctctaagg 210  Q
    ||||||||| | ||||| ||||||||||||  ||||| ||||| ||||||||| | |||||||    
T  12327 ctcattctacattctttcctaatcattattaaacata-ttcagacactcaaaagcatctaagg 12388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1137 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold1137
Description:

Target: scaffold1137; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 210
Target Start/End: Complemental strand, 2173 - 1962
Alignment:
Q  1 aactcacatcaactcgtgcgacaagtatcgcatttaacct-aacaaagaattctgtaactgggtaactcgcgaggcgatggcctctactcgccatggcga 99  Q
    |||||||||| |||||||||||||| |||||||||||||| ||||| | ||||||||||      |||||||||||||  |||||| || ||||||||||    
T  2173 aactcacatccactcgtgcgacaaggatcgcatttaacctaaacaaggcattctgtaacacaagtactcgcgaggcgagagcctctgcttgccatggcga 2074  T
Q  100 gttcaggtgtaactcccaaaaatccattcttaaactattccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaa 198  Q
    ||||||||  |  || ||||| | |||||| ||    ||  | |||||||||||||||  ||||||| ||||||||||||| | | ||||||  ||||||    
T  2073 gttcaggttcagttcacaaaatttcattctaaagtctttttatgttcaatctcattctccaatctttcctaatcattattagacatgttcagtgactcaa 1974  T
Q  199 aaacctctaagg 210  Q
    |||| |||||||    
T  1973 aaacatctaagg 1962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0628 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0628
Description:

Target: scaffold0628; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 210
Target Start/End: Complemental strand, 2674 - 2464
Alignment:
Q  1 aactcacatcaactcgtgcgacaagtatcgcatttaacctaa-caaagaattctgtaactgggtaactcgcgaggcgatggcctctactcgccatggcga 99  Q
    ||||||||||||||||||||||||| ||| |||||  ||||| ||| | ||||||||||      |||||||||||||  ||||||||||||||||||||    
T  2674 aactcacatcaactcgtgcgacaaggatcacatttttcctaaacaaggcattctgtaacacaagtactcgcgaggcgagagcctctactcgccatggcga 2575  T
Q  100 gttcaggtgtaactcccaaaaatccattcttaaactattccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaa 198  Q
    |||||||| | | | |  ||| | |||||| |||   || ||||||||| ||||||||  ||||||| ||||||||||||| | | ||||||| ||||||    
T  2574 gttcaggt-tcagttcacaaatttcattctaaaatctttacaggttcaaactcattctccaatctttcctaatcattattagacatgttcaggtactcaa 2476  T
Q  199 aaacctctaagg 210  Q
    || | |||||||    
T  2475 aagcatctaagg 2464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0165 (Bit Score: 48; Significance: 2e-18; HSPs: 4)
Name: scaffold0165
Description:

Target: scaffold0165; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 114 - 232
Target Start/End: Complemental strand, 27400 - 27281
Alignment:
Q  114 cccaaaaatccattcttaaactattccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaaggtc 212  Q
    |||||||||||||||||||| | | |||||||||||||||  ||| || |||  ||||||||||||| | | |||||||||||||||| | ||||| ||     
T  27400 cccaaaaatccattcttaaaatttcccaggttcaatctcaaactaaaaacttgcctaatcattattatacatgttcaggcactcaaaatcatctaaagtt 27301  T
Q  213 caacttaaggggcaaaacta 232  Q
    ||||||||||| ||||||||    
T  27300 caacttaagggtcaaaacta 27281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0165; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 64 - 105
Target Start/End: Complemental strand, 27526 - 27485
Alignment:
Q  64 aactcgcgaggcgatggcctctactcgccatggcgagttcag 105  Q
    |||||||||||||| ||||||||||||| |||||||||||||    
T  27526 aactcgcgaggcgagggcctctactcgctatggcgagttcag 27485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0165; HSP #3
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 136 - 217
Target Start/End: Original strand, 3855 - 3937
Alignment:
Q  136 attccaggttcaatctcattctagaatcttttctaatcattatta--catagttcaggcactcaaaaacctctaaggtccaact 217  Q
    ||||||||||||||||||| ||| | ||||| |||||||||| ||  ||| |||||||||||||||  | |||||||| |||||    
T  3855 attccaggttcaatctcatcctacattctttcctaatcattactagtcat-gttcaggcactcaaagtcatctaaggttcaact 3937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0165; HSP #4
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 136 - 217
Target Start/End: Original strand, 7919 - 8001
Alignment:
Q  136 attccaggttcaatctcattctagaatcttttctaatcattatta--catagttcaggcactcaaaaacctctaaggtccaact 217  Q
    ||||||||||||||||||| ||| | ||||| |||||||||| ||  ||| |||||||||||||||  | |||||||| |||||    
T  7919 attccaggttcaatctcatcctacattctttcctaatcattactagtcat-gttcaggcactcaaagtcatctaaggttcaact 8001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0142 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0142
Description:

Target: scaffold0142; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 49 - 210
Target Start/End: Original strand, 17078 - 17240
Alignment:
Q  49 attctgtaactgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactcccaaaaatccattcttaaa-ctattccaggttca 147  Q
    ||||||||| | ||| |||||||||||||  |||||| |||||||||||||||||||||   | || ||||  |  ||||| ||| |||| |||||||||    
T  17078 attctgtaaataggtcactcgcgaggcgagagcctctgctcgccatggcgagttcaggtcatattctcaaagttttattctaaaatctat-ccaggttca 17176  T
Q  148 atctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaagg 210  Q
    ||||||||||| | ||||| ||||||||||||| | | |||||||||||||||| | |||||||    
T  17177 atctcattctacattctttcctaatcattattaaacatgttcaggcactcaaaagcatctaagg 17240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0076 (Bit Score: 47; Significance: 6e-18; HSPs: 1)
Name: scaffold0076
Description:

Target: scaffold0076; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 114 - 222
Target Start/End: Complemental strand, 24279 - 24169
Alignment:
Q  114 cccaaaaatcc-attcttaaactattccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaaggt 211  Q
    ||||||||||| ||| ||||||||||||||||||||||||| |||| || |||  ||||||||||||| |||  ||||||||||||||| | |||||| |    
T  24279 cccaaaaatcccatttttaaactattccaggttcaatctcaatctaaaagcttgcctaatcattattatatatattcaggcactcaaaatcatctaagct 24180  T
Q  212 ccaacttaagg 222  Q
     ||||||||||    
T  24179 tcaacttaagg 24169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 47; Significance: 6e-18; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 50 - 210
Target Start/End: Complemental strand, 20247 - 20087
Alignment:
Q  50 ttctgtaactgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactcccaaaaa-tccattcttaaactattccaggttcaa 148  Q
    |||||||| | || |||| |||||||||  ||||||||||||||||||||||||||||  | || ||||||| | ||||||| || || |||||||||||    
T  20247 ttctgtaattaggcaacttgcgaggcgagagcctctactcgccatggcgagttcaggt-cagcttccaaaaagttcattctt-aattaatccaggttcaa 20150  T
Q  149 tctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaagg 210  Q
    |||||||||| | ||||| ||| ||||||||| | | ||||||| |||||||| | |||||||    
T  20149 tctcattctacattctttcctactcattattaaacatgttcaggaactcaaaagcatctaagg 20087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0737 (Bit Score: 46; Significance: 3e-17; HSPs: 1)
Name: scaffold0737
Description:

Target: scaffold0737; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 106
Target Start/End: Complemental strand, 1667 - 1562
Alignment:
Q  1 aactcacatcaactcgtgcgacaagtatcgcatttaacctaacaaagaattctgtaactgggtaactcgcgaggcgatggcctctactcgccatggcgag 100  Q
    ||||||||||||||||||||||||   || ||| ||||||||||| |  |||||||| |||| | ||| ||||||||  |||||||||||| ||||||||    
T  1667 aactcacatcaactcgtgcgacaaaggtcacatgtaacctaacaaggtgttctgtaattgggcatctcacgaggcgagagcctctactcgctatggcgag 1568  T
Q  101 ttcagg 106  Q
    ||||||    
T  1567 ttcagg 1562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0122 (Bit Score: 46; Significance: 3e-17; HSPs: 1)
Name: scaffold0122
Description:

Target: scaffold0122; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 58 - 210
Target Start/End: Complemental strand, 25879 - 25726
Alignment:
Q  58 ctgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactcccaaaaatccattcttaaactattccaggttcaatctcattct 157  Q
    |||||| |||||||||||||  |||||| |||||| ||||||||||||||   | | |||||||| ||||||  ||   || ||||||||||||||| ||    
T  25879 ctgggtcactcgcgaggcgagagcctctgctcgccgtggcgagttcaggtcagatttccaaaaattcattctacaatcttttcaggttcaatctcatcct 25780  T
Q  158 agaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaagg 210  Q
    | | ||||| ||||||||||||| | | |||||||||||||||| | |||||||    
T  25779 acattctttcctaatcattattagacatgttcaggcactcaaaaccatctaagg 25726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0080 (Bit Score: 46; Significance: 3e-17; HSPs: 2)
Name: scaffold0080
Description:

Target: scaffold0080; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 106
Target Start/End: Complemental strand, 19754 - 19649
Alignment:
Q  1 aactcacatcaactcgtgcgacaagtatcgcatttaacctaacaaagaattctgtaactgggtaactcgcgaggcgatggcctctactcgccatggcgag 100  Q
    |||||| |||||| ||||||||||   || ||||||||||||||| |  ||||||||||||| ||||| ||||||||  |||||||||| | ||||||||    
T  19754 aactcatatcaacccgtgcgacaaaggtcacatttaacctaacaaggtgttctgtaactgggcaactcacgaggcgagagcctctactccctatggcgag 19655  T
Q  101 ttcagg 106  Q
    ||||||    
T  19654 ttcagg 19649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0080; HSP #2
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 37 - 107
Target Start/End: Original strand, 40198 - 40268
Alignment:
Q  37 acctaacaaagaattctgtaactgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggt 107  Q
    ||||||||| | | |||||  |||||| |||||||||||||  ||||||||||||| ||||||||||||||    
T  40198 acctaacaaggtactctgtttctgggtcactcgcgaggcgagagcctctactcgccgtggcgagttcaggt 40268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0040 (Bit Score: 46; Significance: 3e-17; HSPs: 2)
Name: scaffold0040
Description:

Target: scaffold0040; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 106
Target Start/End: Complemental strand, 103508 - 103403
Alignment:
Q  1 aactcacatcaactcgtgcgacaagtatcgcatttaacctaacaaagaattctgtaactgggtaactcgcgaggcgatggcctctactcgccatggcgag 100  Q
    ||||||||||||||||| ||||||   || ||||||||||||||| |  |||||||| |||  |||||| |||||||  |||||||||||| ||||||||    
T  103508 aactcacatcaactcgtacgacaaaggtcacatttaacctaacaaggtgttctgtaaatggacaactcgtgaggcgagagcctctactcgctatggcgag 103409  T
Q  101 ttcagg 106  Q
    ||||||    
T  103408 ttcagg 103403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0040; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 114 - 220
Target Start/End: Complemental strand, 103341 - 103234
Alignment:
Q  114 cccaaaaatccattcttaaactattccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaaggtc 212  Q
    ||||||||| |||| ||||||| | ||||||||||||||| |||| || |||  ||||||||||||| | | ||||||||||||| || ||||||||||     
T  103341 cccaaaaattcatttttaaactttcccaggttcaatctcaatctaaaaacttgcctaatcattattatacatgttcaggcactcagaatcctctaaggtt 103242  T
Q  213 caacttaa 220  Q
    | ||||||    
T  103241 cgacttaa 103234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021 (Bit Score: 46; Significance: 3e-17; HSPs: 6)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 106
Target Start/End: Complemental strand, 136237 - 136132
Alignment:
Q  1 aactcacatcaactcgtgcgacaagtatcgcatttaacctaacaaagaattctgtaactgggtaactcgcgaggcgatggcctctactcgccatggcgag 100  Q
    ||||||||||||||||| ||||||   || ||||||||||||||| |  |||| ||| |||  ||||||||||||||  |||||||||||| ||||||||    
T  136237 aactcacatcaactcgtacgacaaaggtcacatttaacctaacaaggtgttctataaatggacaactcgcgaggcgagagcctctactcgctatggcgag 136138  T
Q  101 ttcagg 106  Q
    ||||||    
T  136137 ttcagg 136132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021; HSP #2
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 106
Target Start/End: Complemental strand, 144945 - 144840
Alignment:
Q  1 aactcacatcaactcgtgcgacaagtatcgcatttaacctaacaaagaattctgtaactgggtaactcgcgaggcgatggcctctactcgccatggcgag 100  Q
    ||||||||||||||||| ||||||   || ||||||||||||||| |  |||| ||| |||  ||||||||||||||  |||||||||||| ||||||||    
T  144945 aactcacatcaactcgtacgacaaaggtcacatttaacctaacaaggtgttctataaatggacaactcgcgaggcgagagcctctactcgctatggcgag 144846  T
Q  101 ttcagg 106  Q
    ||||||    
T  144845 ttcagg 144840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021; HSP #3
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 103 - 210
Target Start/End: Original strand, 62913 - 63021
Alignment:
Q  103 caggtgtaactcccaaaaatccattcttaaactattccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaa 201  Q
    |||||| ||||| ||||||| |||||| |||   |||||||||||||||||||||  ||||||| ||||||||||||| | | ||||| |||||||||||    
T  62913 caggtgcaactcacaaaaattcattctaaaatatttccaggttcaatctcattctccaatctttcctaatcattattagacatgttcatgcactcaaaaa 63012  T
Q  202 cctctaagg 210  Q
    | |||||||    
T  63013 catctaagg 63021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021; HSP #4
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 114 - 220
Target Start/End: Complemental strand, 136049 - 135942
Alignment:
Q  114 cccaaaaatccattcttaaactattccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaaggtc 212  Q
    ||||||||| |||| ||||||| | ||||||||||||||| |||| || |||  ||||||||||||| | | ||||| ||||||| |  ||||||||||     
T  136049 cccaaaaattcatttttaaactttcccaggttcaatctcaatctaaaaacttgcctaatcattattatacatgttcaagcactcagagtcctctaaggtt 135950  T
Q  213 caacttaa 220  Q
    | ||||||    
T  135949 cgacttaa 135942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021; HSP #5
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 114 - 220
Target Start/End: Complemental strand, 144757 - 144650
Alignment:
Q  114 cccaaaaatccattcttaaactattccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaaggtc 212  Q
    ||||||||| |||| ||||||| | ||||||||||||||| |||| || |||  ||||||||||||| | | ||||| ||||||| |  ||||||||||     
T  144757 cccaaaaattcatttttaaactttcccaggttcaatctcaatctaaaaacttgcctaatcattattatacatgttcaagcactcagagtcctctaaggtt 144658  T
Q  213 caacttaa 220  Q
    | ||||||    
T  144657 cgacttaa 144650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021; HSP #6
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 58 - 107
Target Start/End: Original strand, 124891 - 124940
Alignment:
Q  58 ctgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggt 107  Q
    |||||| |||||||||||||  |||||| |||||| ||||||||||||||    
T  124891 ctgggtcactcgcgaggcgagagcctctgctcgccgtggcgagttcaggt 124940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 45; Significance: 1e-16; HSPs: 2)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 60 - 210
Target Start/End: Original strand, 2159 - 2311
Alignment:
Q  60 gggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactccca-aaaatccattcttaaactattccaggttcaatctcattcta 158  Q
    |||| ||||| |||||||| ||||||||||||||||||||||||||||   | ||||| ||  | ||||||  ||   |||||||||||||||||| |||    
T  2159 gggtcactcgtgaggcgatagcctctactcgccatggcgagttcaggtcagaatcccacaagtttcattctacaatctttccaggttcaatctcatccta 2258  T
Q  159 gaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaagg 210  Q
     | ||||| ||||||||||||| | | |||||||||||||||| | |||||||    
T  2259 cattctttcctaatcattattagacatgttcaggcactcaaaagcatctaagg 2311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 143 - 222
Target Start/End: Complemental strand, 119280 - 119200
Alignment:
Q  143 gttcaatctcattctagaatcttttctaatcattat--tacatagttcaggcactcaaaaacctctaaggtccaacttaagg 222  Q
    ||||||||||| |||| || ||| ||||||||||||  |||||| ||||||||||||||| | ||||| || ||||||||||    
T  119280 gttcaatctcaatctaaaaacttgtctaatcattattatacata-ttcaggcactcaaaatcatctaatgttcaacttaagg 119200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0278 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0278
Description:

Target: scaffold0278; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 124 - 210
Target Start/End: Original strand, 5966 - 6053
Alignment:
Q  124 cattcttaaactattccaggttcaatctcattctagaatcttttctaatcattattaca-tagttcaggcactcaaaaacctctaagg 210  Q
    |||||||||||||||||| ||||||||||| |||  ||||||| ||||||||||||| |   |||||||||||||||||| |||||||    
T  5966 cattcttaaactattccaagttcaatctcaatctccaatctttcctaatcattattagacctgttcaggcactcaaaaacatctaagg 6053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 3)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 58 - 210
Target Start/End: Complemental strand, 17029 - 16876
Alignment:
Q  58 ctgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactcccaaaaatc-cattcttaaactattccaggttcaatctcattc 156  Q
    |||||| |||||||||||||  |||||| ||| || ||||||||||||||   | | |||||| |  |||||| || || ||||||||||||||||||||    
T  17029 ctgggtcactcgcgaggcgagagcctctgctctccgtggcgagttcaggtcagaattccaaaagtttcattctaaatct-ttccaggttcaatctcattc 16931  T
Q  157 tagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaagg 210  Q
    || | ||||| ||||||||||||| | | |||||||||||||||| | |||||||    
T  16930 tacattctttcctaatcattattagacatgttcaggcactcaaaagcatctaagg 16876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 138 - 217
Target Start/End: Complemental strand, 79096 - 79016
Alignment:
Q  138 tccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaaggtccaact 217  Q
    ||||||||||||||||||||| | || || ||||||||||||| | | ||||| |||||||||| | |||||||| |||||    
T  79096 tccaggttcaatctcattctacattccttcctaatcattattaaacatgttcatgcactcaaaagcatctaaggttcaact 79016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056; HSP #3
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 50 - 94
Target Start/End: Complemental strand, 79151 - 79107
Alignment:
Q  50 ttctgtaactgggtaactcgcgaggcgatggcctctactcgccat 94  Q
    |||||||| |||| ||||||||||||||  |||||||||||||||    
T  79151 ttctgtaattgggcaactcgcgaggcgagagcctctactcgccat 79107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0413 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 2)
Name: scaffold0413
Description:

Target: scaffold0413; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 65 - 210
Target Start/End: Complemental strand, 15422 - 15276
Alignment:
Q  65 actcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactcccaaaaatccattcttaaa-ctattccaggttcaatctcattctagaatc 163  Q
    |||||||||||||  |||||| ||||| |||||||||||||||   | |||||||  | |||||| ||| |||| |||| ||||||||||||||| | ||    
T  15422 actcgcgaggcgagagcctctgctcgctatggcgagttcaggtcagattcccaaagtttcattctaaaatctat-ccagattcaatctcattctacattc 15324  T
Q  164 ttttctaatcattatt--acatagttcaggcactcaaaaacctctaagg 210  Q
    ||| ||||||||||||  ||||| ||||||||||||||| | |||||||    
T  15323 tttcctaatcattattaaacata-ttcaggcactcaaaagcatctaagg 15276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0413; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 114 - 230
Target Start/End: Original strand, 13007 - 13124
Alignment:
Q  114 cccaaaaatccattcttaaactattccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaaggtc 212  Q
    |||||||||||||| ||||||| |  |||||||||||||| |||| || |||  |||||||||| || | | | |||||||||||||| | ||||| ||     
T  13007 cccaaaaatccatttttaaactttctcaggttcaatctcaatctaaaaacttgcctaatcattaatatacatggtcaggcactcaaaatcatctaaagtt 13106  T
Q  213 caacttaaggggcaaaac 230  Q
    ||||||||||| ||||||    
T  13107 caacttaagggtcaaaac 13124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0292 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 2)
Name: scaffold0292
Description:

Target: scaffold0292; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 58 - 210
Target Start/End: Original strand, 649 - 802
Alignment:
Q  58 ctgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactcccaaaaatccattcttaaactattccaggttcaatctcattct 157  Q
    |||||| |||||||||||||  |||||||||||||  ||||||||||| |   | ||| |||  | |||||| ||    ||| |||||||||||||||||    
T  649 ctgggtcactcgcgaggcgagagcctctactcgccgcggcgagttcagttcagattccaaaagtttcattctaaattctttctaggttcaatctcattct 748  T
Q  158 agaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaagg 210  Q
    | | ||||||||||||||||||| | | |||||||||||||||| | |||||||    
T  749 acattcttttctaatcattattagacatgttcaggcactcaaaagcatctaagg 802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0292; HSP #2
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 59 - 200
Target Start/End: Original strand, 3777 - 3920
Alignment:
Q  59 tgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactcccaaaaatcc-attcttaaactattccaggttcaatctcattct 157  Q
    ||||| |||||||||||||  |||||| |||||| ||||||||||||||   | ||||| || |   |||||  ||  ||||||||||||||||||| ||    
T  3777 tgggtcactcgcgaggcgagagcctctgctcgccgtggcgagttcaggtcagaatcccacaagtttgattctacaatcattccaggttcaatctcatcct 3876  T
Q  158 agaatcttttctaatcattattacata-gttcaggcactcaaaa 200  Q
    | | ||||| ||||||||||||| | | |||||| |||||||||    
T  3877 acattctttcctaatcattattagacatgttcagacactcaaaa 3920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0235 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 2)
Name: scaffold0235
Description:

Target: scaffold0235; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 116 - 230
Target Start/End: Original strand, 14004 - 14119
Alignment:
Q  116 caaaaatccattcttaaactattccaggttcaatctcattctagaatcttttctaatcattatta--catagttcaggcactcaaaaacctctaaggtcc 213  Q
    |||||||||||| ||||||  | |||||| |||||||| |||| || |||  |||||||||||||  |||| ||||||||||||||| | |||||||| |    
T  14004 caaaaatccatttttaaacattaccaggtccaatctcaatctaaaaacttacctaatcattattatacata-ttcaggcactcaaaatcatctaaggttc 14102  T
Q  214 aacttaaggggcaaaac 230  Q
    |||||||||| ||||||    
T  14103 aacttaagggacaaaac 14119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0235; HSP #2
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 136 - 217
Target Start/End: Complemental strand, 11260 - 11178
Alignment:
Q  136 attccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaaggtccaact 217  Q
    ||||||||||||||||||| ||| | ||||| ||||||||||||| | | ||||||||||||||||   |||||||| |||||    
T  11260 attccaggttcaatctcatcctacattctttcctaatcattattagacatgttcaggcactcaaaagaatctaaggttcaact 11178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0217 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold0217
Description:

Target: scaffold0217; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 59 - 210
Target Start/End: Complemental strand, 16413 - 16260
Alignment:
Q  59 tgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactcccaaaaatc-cattcttaaactattccaggttcaatctcattct 157  Q
    ||||| |||||||||||||  |||||| |||||||||||||||||||||   | | |||||  |  |||||  |||   |||||||||||||||||||||    
T  16413 tgggtcactcgcgaggcgagagcctctgctcgccatggcgagttcaggttagatttccaaacgtttcattcgaaaatctttccaggttcaatctcattct 16314  T
Q  158 agaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaagg 210  Q
    | | ||||| ||||||||||||| | | |||||||||||||||| | |||||||    
T  16313 aaattctttcctaatcattattagacatgttcaggcactcaaaagcatctaagg 16260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0145 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold0145
Description:

Target: scaffold0145; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 58 - 210
Target Start/End: Original strand, 39067 - 39219
Alignment:
Q  58 ctgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactcccaaaaatccattcttaaactattccaggttcaatctcattct 157  Q
    |||||| |||||||||||||  |||||| |||||| ||||||||||||||   | |||  ||  | |||||  || || |||||||||||||||||||||    
T  39067 ctgggtcactcgcgaggcgagagcctctgctcgccgtggcgagttcaggtcagaatccacaagtttcattcaaaatct-ttccaggttcaatctcattct 39165  T
Q  158 agaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaagg 210  Q
    | | ||||| ||||||||||||| | | |||||||||||||||| | |||||||    
T  39166 acattctttcctaatcattattagacatgttcaggcactcaaaagcatctaagg 39219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0075 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 3)
Name: scaffold0075
Description:

Target: scaffold0075; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 114 - 229
Target Start/End: Complemental strand, 53230 - 53113
Alignment:
Q  114 cccaaaaatccattctt-aaactattccaggttcaatctcattctagaatcttttctaatcattattaca-tagttcaggcactcaaaaacctctaaggt 211  Q
    |||||||||||||| || ||||| | ||||||||||||||| |||| || |||  ||||||||||||| | | |||||||||||||||| | ||||| ||    
T  53230 cccaaaaatccattttttaaactttcccaggttcaatctcaatctaaaaacttgcctaatcattattatacttgttcaggcactcaaaatcatctaaagt 53131  T
Q  212 ccaacttaaggggcaaaa 229  Q
     ||||||||||| |||||    
T  53130 tcaacttaagggtcaaaa 53113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0075; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 65 - 105
Target Start/End: Complemental strand, 53354 - 53314
Alignment:
Q  65 actcgcgaggcgatggcctctactcgccatggcgagttcag 105  Q
    ||||||||||||| ||||||||||||| |||||||||||||    
T  53354 actcgcgaggcgagggcctctactcgctatggcgagttcag 53314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0075; HSP #3
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 8 - 217
Target Start/End: Complemental strand, 8158 - 7948
Alignment:
Q  8 atcaactcgtgcgacaagtatcgcatttaacctaa-caaagaattctgtaactgggtaactcgcgaggcgatggcctctactcgccatggcgagttcagg 106  Q
    |||||||||||||||||  |||||||||||||||| ||| | ||||||||||       ||||||||||||  |||||| ||||||||||||||||| |     
T  8158 atcaactcgtgcgacaaagatcgcatttaacctaaacaaggcattctgtaacactagtgctcgcgaggcgagagcctctgctcgccatggcgagttctgt 8059  T
Q  107 tgtaactcccaaaaatccattcttaaactattccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctc 205  Q
    |  |    |||||  | |||||| |  || |||||||||||||||||| ||| | ||||| ||||||| ||||| | | |||||||||||||||  | ||    
T  8058 tagattctccaaagtttcattctaagtct-ttccaggttcaatctcatcctacattctttcctaatcaatattagacatgttcaggcactcaaaggcatc 7960  T
Q  206 taaggtccaact 217  Q
    |||||| |||||    
T  7959 taaggttcaact 7948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0357 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 3)
Name: scaffold0357
Description:

Target: scaffold0357; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 49 - 104
Target Start/End: Complemental strand, 15921 - 15866
Alignment:
Q  49 attctgtaactgggtaactcgcgaggcgatggcctctactcgccatggcgagttca 104  Q
    |||||||||||||| |||||||||||||| ||||| ||||||| ||||||||||||    
T  15921 attctgtaactgggcaactcgcgaggcgagggcctatactcgctatggcgagttca 15866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0357; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 114 - 180
Target Start/End: Original strand, 13570 - 13636
Alignment:
Q  114 cccaaaaatccattcttaaactattccaggttcaatctcattctagaatcttttctaatcattatta 180  Q
    |||||||||||||||||||||| | ||||||||||||||| |||| || |||  |||||||||||||    
T  13570 cccaaaaatccattcttaaactttcccaggttcaatctcaatctaaaaacttgcctaatcattatta 13636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0357; HSP #3
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 114 - 211
Target Start/End: Original strand, 3133 - 3231
Alignment:
Q  114 cccaaaaatccattcttaaactattccaggttcaatctcattctagaatcttttctaatcattat--tacatagttcaggcactcaaaaacctctaaggt 211  Q
    |||||||||||||| ||||||| | ||| ||||||||||| |||| || |||  |||||||||||  |||||| ||||||||||||||| | ||||||||    
T  3133 cccaaaaatccatttttaaactttcccaagttcaatctcaatctaaaaacttgcctaatcattattgtacata-ttcaggcactcaaaatcatctaaggt 3231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 2)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 114 - 200
Target Start/End: Original strand, 80701 - 80788
Alignment:
Q  114 cccaaaaatccattcttaaactattccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaa 200  Q
    |||||||||||||| ||||||| | ||||||||||||||| |||| || |||  ||||||||||||| | | ||||||||||||||||    
T  80701 cccaaaaatccatttttaaactttcccaggttcaatctcaatctaaaaacttgcctaatcattattatacatgttcaggcactcaaaa 80788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 66 - 106
Target Start/End: Complemental strand, 128775 - 128735
Alignment:
Q  66 ctcgcgaggcgatggcctctactcgccatggcgagttcagg 106  Q
    ||||||||||||  |||||||||||| ||||||||||||||    
T  128775 ctcgcgaggcgagagcctctactcgctatggcgagttcagg 128735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1765 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold1765
Description:

Target: scaffold1765; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 1333 - 1391
Alignment:
Q  1 aactcacatcaactcgtgcgacaagtatcgcatttaacctaacaaagaattctgtaact 59  Q
    |||||||||||||||||| |||||  ||||||||||||||||||| | |||||||||||    
T  1333 aactcacatcaactcgtgtgacaaagatcgcatttaacctaacaaggcattctgtaact 1391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0627 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0627
Description:

Target: scaffold0627; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 58 - 202
Target Start/End: Original strand, 211 - 356
Alignment:
Q  58 ctgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggtgt-aactcccaaaaatccattcttaaactattccaggttcaatctcattc 156  Q
    |||||| ||||||| |||||  ||||||||||||  ||||||||||||||   |||||  |||  | |||||| || || |||||||||||||||||| |    
T  211 ctgggtcactcgcgtggcgagagcctctactcgctgtggcgagttcaggtcagaactcaaaaagtttcattctaaatct-ttccaggttcaatctcatcc 309  T
Q  157 tagaatcttttctaatcattattacata-gttcaggcactcaaaaac 202  Q
    || | ||||| ||||||||||||| | | ||||||||||||||||||    
T  310 tacattctttcctaatcattattagacatgttcaggcactcaaaaac 356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0175 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 2)
Name: scaffold0175
Description:

Target: scaffold0175; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 140 - 217
Target Start/End: Original strand, 34509 - 34587
Alignment:
Q  140 caggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaaggtccaact 217  Q
    ||||||||||||||||||| | ||||| ||||||||||||| | | |||||||||||||||| | |||||||| |||||    
T  34509 caggttcaatctcattctacattctttcctaatcattattagacatgttcaggcactcaaaagcatctaaggttcaact 34587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0175; HSP #2
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 58 - 107
Target Start/End: Original strand, 13398 - 13447
Alignment:
Q  58 ctgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggt 107  Q
    |||||| |||||||||||||  |||||| |||||| ||||||||||||||    
T  13398 ctgggtcactcgcgaggcgagagcctctgctcgccgtggcgagttcaggt 13447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0161 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0161
Description:

Target: scaffold0161; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 140 - 217
Target Start/End: Complemental strand, 2177 - 2099
Alignment:
Q  140 caggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaaggtccaact 217  Q
    ||||||||||||||||||| | ||||| ||||||||||||| | | |||||||||||||||| | |||||||| |||||    
T  2177 caggttcaatctcattctacattctttcctaatcattattagacatgttcaggcactcaaaagcatctaaggttcaact 2099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 3)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 58 - 210
Target Start/End: Original strand, 52218 - 52372
Alignment:
Q  58 ctgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactcccaaaaatc-cattcttaaactattccaggttcaatctcattc 156  Q
    |||||| |||||||||||||  |||||| |||||| ||||||||||||||   | ||||| || |  ||||||  ||   |||||||||||||||||| |    
T  52218 ctgggtcactcgcgaggcgagagcctctgctcgccgtggcgagttcaggtcagaatcccacaagtttcattctacaatctttccaggttcaatctcatcc 52317  T
Q  157 tagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaagg 210  Q
    || | ||||| ||||||||||||| | | |||||||||||||||| | |||||||    
T  52318 tacattctttcctaatcattattagacatgttcaggcactcaaaagcatctaagg 52372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 141 - 217
Target Start/End: Complemental strand, 167721 - 167644
Alignment:
Q  141 aggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaaggtccaact 217  Q
    |||||||||||||| ||| | ||||| ||||||||||||| | | |||||||||||||||| | |||||||| |||||    
T  167721 aggttcaatctcatcctaaattctttcctaatcattattagacatgttcaggcactcaaaagcatctaaggttcaact 167644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #3
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 58 - 107
Target Start/End: Complemental strand, 167794 - 167745
Alignment:
Q  58 ctgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggt 107  Q
    |||||| |||||||||||||  |||||| |||||| ||||||||||||||    
T  167794 ctgggtcactcgcgaggcgagagcctctgctcgccgtggcgagttcaggt 167745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0876 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0876
Description:

Target: scaffold0876; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 137 - 217
Target Start/End: Complemental strand, 2820 - 2739
Alignment:
Q  137 ttccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaaggtccaact 217  Q
    |||||||||||||||||| ||| | ||||| ||||||||||||| | | |||||||||||||||| | |||||||| |||||    
T  2820 ttccaggttcaatctcatcctacattctttcctaatcattattagacatgttcaggcactcaaaagcatctaaggttcaact 2739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0395 (Bit Score: 38; Significance: 0.000000000002; HSPs: 2)
Name: scaffold0395
Description:

Target: scaffold0395; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 66 - 179
Target Start/End: Complemental strand, 8298 - 8185
Alignment:
Q  66 ctcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactcccaaaaatccattcttaaactattccaggttcaatctcattctagaatctt 165  Q
    ||||||||| ||  |||||||||||||| ||||| ||  |||  ||| | ||| |||||||||| | ||||||||| |||||||||||||||| || |||    
T  8298 ctcgcgaggtgagagcctctactcgccacggcgatttagggtaaaacactcaagaatccattctgacactattccaagttcaatctcattctaaaacctt 8199  T
Q  166 ttctaatcattatt 179  Q
      ||||||||||||    
T  8198 gcctaatcattatt 8185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0395; HSP #2
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 139 - 210
Target Start/End: Complemental strand, 695 - 623
Alignment:
Q  139 ccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaagg 210  Q
    |||||||||||||| ||||| ||||||| ||||||||||||| | | |||||||||||||||| | |||||||    
T  695 ccaggttcaatctcgttctacaatctttcctaatcattattagacatgttcaggcactcaaaagcatctaagg 623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0130 (Bit Score: 38; Significance: 0.000000000002; HSPs: 2)
Name: scaffold0130
Description:

Target: scaffold0130; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 114 - 230
Target Start/End: Complemental strand, 1461 - 1344
Alignment:
Q  114 cccaaaaatccattcttaaactattccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaaggtc 212  Q
    |||||||||||||| ||||||| |  |||||||||||||| |||| || ||| ||||||||||| || | | |||||||||||||||| | ||| | ||     
T  1461 cccaaaaatccatttttaaactttctcaggttcaatctcaatctaaaaacttgtctaatcattaatatacatgttcaggcactcaaaatcatctgaagtt 1362  T
Q  213 caacttaaggggcaaaac 230  Q
    |||||| |||| ||||||    
T  1361 caactttagggtcaaaac 1344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0130; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 139 - 210
Target Start/End: Original strand, 28924 - 28996
Alignment:
Q  139 ccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaagg 210  Q
    |||||||||||||||||||| | ||||| ||||||||||||| | | ||||||| |||||||| | |||||||    
T  28924 ccaggttcaatctcattctacattctttcctaatcattattagacatgttcaggaactcaaaagcatctaagg 28996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0120 (Bit Score: 38; Significance: 0.000000000002; HSPs: 3)
Name: scaffold0120
Description:

Target: scaffold0120; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 59 - 211
Target Start/End: Complemental strand, 32772 - 32619
Alignment:
Q  59 tgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactcccaaaaatccattcttaaactattccaggttcaatctcattcta 158  Q
    ||||| ||||||||||||   |||||| |||||  |||||||||  |||| ||||| ||||||| |||||| |||   || ||||||||||||||||||     
T  32772 tgggtcactcgcgaggcgggagcctctcctcgctgtggcgagttagggtgcaactcacaaaaattcattctaaaatctttacaggttcaatctcattctc 32673  T
Q  159 gaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaaggt 211  Q
     | || || ||||||||||||| | | |||||| ||||||||| | ||||||||    
T  32672 cagtccttcctaatcattattagacatgttcagacactcaaaagcatctaaggt 32619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0120; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 59 - 211
Target Start/End: Original strand, 46233 - 46386
Alignment:
Q  59 tgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactcccaaaaatccattcttaaactattccaggttcaatctcattcta 158  Q
    ||||| ||||||||||||   |||||| |||||  |||||||||  |||| ||||| ||||||| |||||| |||   || ||||||||||||||||||     
T  46233 tgggtcactcgcgaggcgggagcctctcctcgctgtggcgagttagggtgcaactcacaaaaattcattctaaaatctttacaggttcaatctcattctc 46332  T
Q  159 gaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaaggt 211  Q
     | || || ||||||||||||| | | |||||| ||||||||| | ||||||||    
T  46333 cagtccttcctaatcattattagacatgttcagacactcaaaagcatctaaggt 46386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0120; HSP #3
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 137 - 200
Target Start/End: Original strand, 16473 - 16537
Alignment:
Q  137 ttccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaa 200  Q
    |||||||||||||||| | ||| | ||||| ||||||||||||| | | ||||||||||||||||    
T  16473 ttccaggttcaatctcgtcctacattctttcctaatcattattagacatgttcaggcactcaaaa 16537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0647 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0647
Description:

Target: scaffold0647; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 139 - 210
Target Start/End: Complemental strand, 5854 - 5782
Alignment:
Q  139 ccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaagg 210  Q
    |||||||||||||||| ||| ||||||| ||||||||||||| | | |||||||||||||||| | |||||||    
T  5854 ccaggttcaatctcatcctacaatctttcctaatcattattagacatgttcaggcactcaaaagcatctaagg 5782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0601 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0601
Description:

Target: scaffold0601; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 116 - 233
Target Start/End: Original strand, 7095 - 7213
Alignment:
Q  116 caaaaatccattcttaaactattccaggttcaatctcattctagaatcttttctaatcattat--tacatagttcaggcactcaaaaacctctaaggtcc 213  Q
    |||||||||||| ||||||| | ||||||||||||||| |||| || |||  |||||||||||  |||||| ||||| ||||||||| | |||||  | |    
T  7095 caaaaatccatttttaaactttcccaggttcaatctcaatctaaaaacttgcctaatcattattatacata-ttcagtcactcaaaatcatctaaaattc 7193  T
Q  214 aacttaaggggcaaaactac 233  Q
    |||||||||  |||||||||    
T  7194 aacttaaggttcaaaactac 7213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0598 (Bit Score: 37; Significance: 0.000000000006; HSPs: 2)
Name: scaffold0598
Description:

Target: scaffold0598; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 136 - 217
Target Start/End: Complemental strand, 799 - 717
Alignment:
Q  136 attccaggttcaatctcattctagaatcttttctaatcattatt--acatagttcaggcactcaaaaacctctaaggtccaact 217  Q
    ||||||||||||||||||| ||| | ||||| ||||||||||||  ||||| ||||||||||||||| | |||||||| |||||    
T  799 attccaggttcaatctcatcctacattctttcctaatcattattagacata-ttcaggcactcaaaagcatctaaggttcaact 717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0598; HSP #2
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 58 - 107
Target Start/End: Complemental strand, 867 - 818
Alignment:
Q  58 ctgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggt 107  Q
    |||||| |||||||||||||  |||||| |||||| ||||||||||||||    
T  867 ctgggttactcgcgaggcgagagcctctgctcgccgtggcgagttcaggt 818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0456 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0456
Description:

Target: scaffold0456; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 136 - 211
Target Start/End: Complemental strand, 10173 - 10097
Alignment:
Q  136 attccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaaggt 211  Q
    ||||||||||||||||||| ||| | ||||| ||||||||||||| | | |||||||||||||||| | ||||||||    
T  10173 attccaggttcaatctcatcctacattctttcctaatcattattagacatgttcaggcactcaaaagcatctaaggt 10097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0100 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0100
Description:

Target: scaffold0100; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 64 - 210
Target Start/End: Original strand, 20425 - 20572
Alignment:
Q  64 aactcgcgaggcgatggcctctactcgccatggcgagttcaggtgt-aactcccaaaaatccattcttaaactattccaggttcaatctcattctagaat 162  Q
    ||||||||||||||  |||||| |||| | ||||||| ||||||   |||||| |||  | |||||| || || ||||||||||||||| |||||| | |    
T  20425 aactcgcgaggcgagagcctctgctcgtcgtggcgagctcaggtcagaactccaaaagtttcattctaaatct-ttccaggttcaatcttattctacatt 20523  T
Q  163 cttttctaatcattattacata-gttcaggcactcaaaaacctctaagg 210  Q
    |||| ||||||||||||| | | |||||||||||||||| | |||||||    
T  20524 ctttcctaatcattattagacatgttcaggcactcaaaagcatctaagg 20572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0305 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0305
Description:

Target: scaffold0305; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 66 - 210
Target Start/End: Original strand, 20717 - 20863
Alignment:
Q  66 ctcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactcccaaaaatc-cattct-taaactattccaggttcaatctcattctagaatc 163  Q
    ||||||||||||  |||||| |||||| ||||||||||||||   | ||||| || |  |||||| ||| || |||||||||||||||||| ||| | ||    
T  20717 ctcgcgaggcgagagcctctgctcgccgtggcgagttcaggtcagaatcccacaagtttcattctataatct-ttccaggttcaatctcatcctacattc 20815  T
Q  164 ttttctaatcattattacata-gttcaggcactcaaaaacctctaagg 210  Q
    ||| ||||||||||||| | | |||||||||||||||| | |||||||    
T  20816 tttcctaatcattattagacatgttcaggcactcaaaagcatctaagg 20863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0123 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0123
Description:

Target: scaffold0123; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 114 - 200
Target Start/End: Original strand, 25545 - 25632
Alignment:
Q  114 cccaaaaatccattcttaaactattccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaa 200  Q
    |||||||||||||| ||||||| ||||| ||||||||||| |||| || |||  ||||||||||||| | |  |||||||||||||||    
T  25545 cccaaaaatccatttttaaacttttccaagttcaatctcaatctaaaaacttgcctaatcattattatacattttcaggcactcaaaa 25632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1257 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold1257
Description:

Target: scaffold1257; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 2088 - 2030
Alignment:
Q  1 aactcacatcaactcgtgcgacaagtatcgcatttaacct-aacaaagaattctgtaac 58  Q
    ||||||||||||||||||||||||  |||||||||||||| ||||| | ||||||||||    
T  2088 aactcacatcaactcgtgcgacaaagatcgcatttaacctaaacaaggcattctgtaac 2030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0718 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0718
Description:

Target: scaffold0718; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 136 - 217
Target Start/End: Complemental strand, 4878 - 4796
Alignment:
Q  136 attccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaaggtccaact 217  Q
    ||||||||||||||||||| ||| | ||||| ||||||||||||| | | |||||||||||||||  | |||||||| |||||    
T  4878 attccaggttcaatctcatcctacattctttcctaatcattattagacatgttcaggcactcaaaggcatctaaggttcaact 4796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0427 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0427
Description:

Target: scaffold0427; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 136 - 217
Target Start/End: Original strand, 13869 - 13951
Alignment:
Q  136 attccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaaggtccaact 217  Q
    ||||||||||||||||||| ||| |  |||| ||||||||||||| | | |||||||||||||||| | |||||||| |||||    
T  13869 attccaggttcaatctcatgctacatcctttcctaatcattattagacatgttcaggcactcaaaagcatctaaggttcaact 13951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0358 (Bit Score: 35; Significance: 0.00000000009; HSPs: 4)
Name: scaffold0358
Description:

Target: scaffold0358; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 136 - 217
Target Start/End: Original strand, 310 - 392
Alignment:
Q  136 attccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaaggtccaact 217  Q
    ||||||| ||||||||||| ||| | ||||| ||||||||||||| | | |||||||||||||||| | |||||||| |||||    
T  310 attccagattcaatctcatcctacattctttcctaatcattattagacatgttcaggcactcaaaagcatctaaggttcaact 392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0358; HSP #2
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 136 - 217
Target Start/End: Original strand, 5086 - 5168
Alignment:
Q  136 attccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaaggtccaact 217  Q
    ||||||| ||||||||||| ||| | ||||| ||||||||||||| | | |||||||||||||||| | |||||||| |||||    
T  5086 attccagattcaatctcatcctacattctttcctaatcattattagacatgttcaggcactcaaaagcatctaaggttcaact 5168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0358; HSP #3
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 59 - 107
Target Start/End: Original strand, 243 - 291
Alignment:
Q  59 tgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggt 107  Q
    ||||| ||| |||||||||  |||||| |||||||||||||||||||||    
T  243 tgggtcacttgcgaggcgagagcctctgctcgccatggcgagttcaggt 291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0358; HSP #4
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 59 - 107
Target Start/End: Original strand, 5019 - 5067
Alignment:
Q  59 tgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggt 107  Q
    ||||| ||| |||||||||  |||||| |||||||||||||||||||||    
T  5019 tgggtcacttgcgaggcgagagcctctgctcgccatggcgagttcaggt 5067  T

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Target: scaffold0352 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0352
Description:

Target: scaffold0352; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 138 - 211
Target Start/End: Complemental strand, 17742 - 17668
Alignment:
Q  138 tccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaaggt 211  Q
    ||||||||||||||||| ||| | ||||| ||||||||||||| | | |||||||||||||||| | ||||||||    
T  17742 tccaggttcaatctcatcctacattctttcctaatcattattagacatgttcaggcactcaaaagcatctaaggt 17668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0266 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0266
Description:

Target: scaffold0266; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 137 - 210
Target Start/End: Complemental strand, 18693 - 18619
Alignment:
Q  137 ttccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaagg 210  Q
    |||||||||||||||||| ||| | ||||| ||||||||||||| | | |||||||||||||||| | |||||||    
T  18693 ttccaggttcaatctcatcctacattctttcctaatcattattagacatgttcaggcactcaaaagcatctaagg 18619  T

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Target: scaffold0098 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0098
Description:

Target: scaffold0098; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 139 - 228
Target Start/End: Original strand, 29149 - 29239
Alignment:
Q  139 ccaggttcaatctcattctagaatcttttctaatcattattacatag-ttcaggcactcaaaaacctctaaggtccaacttaaggggcaaa 228  Q
    |||||| |||||||| |||| || |||  ||||||||||||| |||  ||||||||||||||| | |||||||| ||||||||||| ||||    
T  29149 ccaggtccaatctcaatctaaaaacttgcctaatcattattatatatattcaggcactcaaaatcatctaaggttcaacttaagggacaaa 29239  T

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Target: scaffold1842 (Bit Score: 34; Significance: 0.0000000004; HSPs: 2)
Name: scaffold1842
Description:

Target: scaffold1842; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 141 - 217
Target Start/End: Complemental strand, 791 - 714
Alignment:
Q  141 aggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaaggtccaact 217  Q
    |||||||||||||| ||| | ||||| ||||||||||||| | | |||||||||||||||| | |||||||| |||||    
T  791 aggttcaatctcatcctaaattctttcctaatcattattagacatgttcaggcactcaaaagcatctaaggttcaact 714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1842; HSP #2
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 58 - 107
Target Start/End: Complemental strand, 864 - 815
Alignment:
Q  58 ctgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggt 107  Q
    |||||| |||||||||||||  |||||| |||||| ||||||||||||||    
T  864 ctgggtcactcgcgaggcgagagcctctgctcgccgtggcgagttcaggt 815  T

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Target: scaffold0351 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0351
Description:

Target: scaffold0351; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 140 - 220
Target Start/End: Original strand, 16657 - 16738
Alignment:
Q  140 caggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaaggtccaacttaa 220  Q
    ||||||||||||| | ||| | ||||| ||||||||||||| | | |||||||||||||||| | |||||||| ||||||||    
T  16657 caggttcaatctcgtcctacattctttcctaatcattattagacatgttcaggcactcaaaagcatctaaggttcaacttaa 16738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0261 (Bit Score: 34; Significance: 0.0000000004; HSPs: 2)
Name: scaffold0261
Description:

Target: scaffold0261; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 140 - 210
Target Start/End: Original strand, 16047 - 16118
Alignment:
Q  140 caggttcaatctcattctagaatcttttctaatcattatt--acatagttcaggcactcaaaaacctctaagg 210  Q
    ||||||||||||||||||| | ||||| ||||||||||||  ||||| ||||||||||||||| | |||||||    
T  16047 caggttcaatctcattctacattctttcctaatcattattagacata-ttcaggcactcaaaagcatctaagg 16118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0261; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 117 - 228
Target Start/End: Complemental strand, 18021 - 17909
Alignment:
Q  117 aaaaatccattcttaaactattccaggttcaatctcattctagaatcttttctaatcattat--tacatagttcaggcactcaaaaacctctaaggtcca 214  Q
    ||||||||||| ||||||  | |||||| |||||||| |||| || |||  |||||||||||  |||||| |||| ||||||||||   |||||||| ||    
T  18021 aaaaatccatttttaaaccttcccaggtccaatctcaatctaaaaacttgcctaatcattattatacata-ttcatgcactcaaaattatctaaggttca 17923  T
Q  215 acttaaggggcaaa 228  Q
    ||||||||| ||||    
T  17922 acttaagggacaaa 17909  T

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Target: scaffold1419 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold1419
Description:

Target: scaffold1419; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 66 - 102
Target Start/End: Original strand, 338 - 374
Alignment:
Q  66 ctcgcgaggcgatggcctctactcgccatggcgagtt 102  Q
    |||||||||||| ||||||||||||||||||||||||    
T  338 ctcgcgaggcgagggcctctactcgccatggcgagtt 374  T

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Target: scaffold1403 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold1403
Description:

Target: scaffold1403; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 800 - 900
Alignment:
Q  1 aactcacatcaactcgtgcgacaagtatcgcatttaacctaacaaagaattctgtaactgggtaactcgcgaggcgatggcctctactcgccatggcgag 100  Q
    ||||||||||||||||||||||||   || ||||||||||||||| |  ||||||       || ||||||||| || ||||||||||||||||||||||    
T  800 aactcacatcaactcgtgcgacaaaggtctcatttaacctaacaaggtgttctgtctaacactagctcgcgaggtgagggcctctactcgccatggcgag 899  T
Q  101 t 101  Q
    |    
T  900 t 900  T

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Target: scaffold0221 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0221
Description:

Target: scaffold0221; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 12679 - 12623
Alignment:
Q  1 aactcacatcaactcgtgcgacaagtatcgcatttaacctaacaaagaattctgtaa 57  Q
    |||||| | |||||||||||||||| ||||||||||||||||  ||| |||||||||    
T  12679 aactcataacaactcgtgcgacaagaatcgcatttaacctaaacaagcattctgtaa 12623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0121 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0121
Description:

Target: scaffold0121; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 137 - 200
Target Start/End: Complemental strand, 8267 - 8203
Alignment:
Q  137 ttccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaa 200  Q
    |||||||||||||||||| ||| | ||||| ||||||||||||| | | ||||||||||||||||    
T  8267 ttccaggttcaatctcatcctacattctttcctaatcattattagacatgttcaggcactcaaaa 8203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0114 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0114
Description:

Target: scaffold0114; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 135 - 220
Target Start/End: Complemental strand, 15213 - 15127
Alignment:
Q  135 tattccaggttcaatctcattctagaatcttttctaatcattatt--acatagttcaggcactcaaaaacctctaaggtccaacttaa 220  Q
    |||||||||||||||||||| ||| | ||||| ||||||||||||  ||||| || |||||||||||| | |||| ||| ||||||||    
T  15213 tattccaggttcaatctcatcctacattctttcctaatcattattagacata-ttaaggcactcaaaagcatctacggttcaacttaa 15127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0540 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0540
Description:

Target: scaffold0540; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 58 - 200
Target Start/End: Complemental strand, 827 - 684
Alignment:
Q  58 ctgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactcccaaaaatccattcttaaactattccaggttcaatctcattct 157  Q
    |||||| |||||||||||||  |||||  ||| || ||||||||||||||   | | |||||| | ||||||  ||   || ||| ||||||||||||||    
T  827 ctgggtcactcgcgaggcgagagcctccgctcaccgtggcgagttcaggtcagatttccaaaagttcattctacaatcttttcagattcaatctcattct 728  T
Q  158 agaatcttttctaatcattattacata-gttcaggcactcaaaa 200  Q
    | | ||||| ||||||||||||| | | ||||||||||||||||    
T  727 acattctttcctaatcattattagacatgttcaggcactcaaaa 684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0109 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0109
Description:

Target: scaffold0109; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 117 - 233
Target Start/End: Complemental strand, 35625 - 35508
Alignment:
Q  117 aaaaatccattcttaaactattccaggttcaatctcattctagaatcttttctaatcattatta--catagttcaggcactcaaaaacctctaaggtcca 214  Q
    ||||||||| | ||||||| |  ||||| | |||||| |||| || |||  |||||||||||||  |||| ||||||||||||||| | | |||||| ||    
T  35625 aaaaatccacttttaaactttctcaggtccgatctcaatctaaaaacttgcctaatcattattatacata-ttcaggcactcaaaatcatttaaggttca 35527  T
Q  215 acttaaggggcaaaactac 233  Q
    ||||||||| |||||||||    
T  35526 acttaagggacaaaactac 35508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 117 - 180
Target Start/End: Original strand, 268094 - 268157
Alignment:
Q  117 aaaaatccattcttaaactattccaggttcaatctcattctagaatcttttctaatcattatta 180  Q
    ||||||||||| ||||||| | ||||||||||||||| |||| || |||  |||||||||||||    
T  268094 aaaaatccatttttaaactttcccaggttcaatctcaatctaaaaacttgcctaatcattatta 268157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0484 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0484
Description:

Target: scaffold0484; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 136 - 217
Target Start/End: Original strand, 1288 - 1370
Alignment:
Q  136 attccaggttcaatctcattctagaatcttttctaatcattatta-catagttcaggcactcaaaaacctctaaggtccaact 217  Q
    ||||||||||||||||||| ||| | ||||| |||||||||||||  |  |||||||||||||||  | |||||||| |||||    
T  1288 attccaggttcaatctcatcctacattctttcctaatcattattagtaatgttcaggcactcaaaggcatctaaggttcaact 1370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0403 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0403
Description:

Target: scaffold0403; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 136 - 217
Target Start/End: Original strand, 5222 - 5304
Alignment:
Q  136 attccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaaggtccaact 217  Q
    ||||||||||||||||||| ||| | ||||| ||||||||||||| | |  |||| |||||||||| | |||||||| |||||    
T  5222 attccaggttcaatctcatcctacattctttcctaatcattattagacatcttcatgcactcaaaagcatctaaggttcaact 5304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0389 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0389
Description:

Target: scaffold0389; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 140 - 217
Target Start/End: Complemental strand, 13340 - 13262
Alignment:
Q  140 caggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaaggtccaact 217  Q
    |||| |||||||||| ||| | ||||| ||||||||||||| | | |||||||||||||||| | |||||||| |||||    
T  13340 caggctcaatctcatcctacattctttcctaatcattattagacatgttcaggcactcaaaagcatctaaggttcaact 13262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0113 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 136 - 217
Target Start/End: Original strand, 32438 - 32520
Alignment:
Q  136 attccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaaggtccaact 217  Q
    ||||||||||||||||||| | | | ||||| ||| ||||||||| | | |||||||||||||||| | |||||||| |||||    
T  32438 attccaggttcaatctcatcccacattctttcctagtcattattagacatgttcaggcactcaaaagcatctaaggttcaact 32520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0088 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0088
Description:

Target: scaffold0088; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 136 - 217
Target Start/End: Original strand, 21275 - 21357
Alignment:
Q  136 attccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaaggtccaact 217  Q
    ||||||||| ||||||||| ||| | |||||  |||||||||||| | | ||||||||||| |||||| |||||||| |||||    
T  21275 attccaggtacaatctcatcctacattctttcataatcattattagacatgttcaggcactaaaaaacatctaaggttcaact 21357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 31; Significance: 0.00000002; HSPs: 2)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 137 - 210
Target Start/End: Complemental strand, 39666 - 39592
Alignment:
Q  137 ttccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaagg 210  Q
    |||||||||||||||||||||| | ||||| |||||||||| || | | ||||||| |||||||| | |||||||    
T  39666 ttccaggttcaatctcattctacattctttcctaatcattaatagacatgttcaggtactcaaaagcatctaagg 39592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 137 - 200
Target Start/End: Original strand, 40242 - 40306
Alignment:
Q  137 ttccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaa 200  Q
    |||||||||||||||||| ||  | ||||| ||||||||||||| | | ||||||||||||||||    
T  40242 ttccaggttcaatctcatcctccattctttcctaatcattattagacatgttcaggcactcaaaa 40306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0476 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0476
Description:

Target: scaffold0476; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 13017 - 13058
Alignment:
Q  1 aactcacatcaactcgtgcgacaagtatcgcatttaacctaa 42  Q
    ||||||||||||||||||||||||  || |||||||||||||    
T  13017 aactcacatcaactcgtgcgacaaagattgcatttaacctaa 13058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0141 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0141
Description:

Target: scaffold0141; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 58 - 107
Target Start/End: Original strand, 39783 - 39832
Alignment:
Q  58 ctgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggt 107  Q
    |||||| |||||||||||||  |||||| |||||| ||||||||||||||    
T  39783 ctgggtcactcgcgaggcgagagcctctgctcgccgtggcgagttcaggt 39832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 58 - 107
Target Start/End: Complemental strand, 75029 - 74980
Alignment:
Q  58 ctgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggt 107  Q
    |||||| |||||||||||||  |||||| |||||| ||||||||||||||    
T  75029 ctgggtcactcgcgaggcgagagcctctgctcgccgtggcgagttcaggt 74980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0037
Description:

Target: scaffold0037; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 22544 - 22467
Alignment:
Q  1 aactcacatcaactcgtgcgacaagtatcgcatttaacctaacaaaga-attctgtaactgggtaactcgcgaggcga 77  Q
    ||||||||||||||||||||||||  |||||||||| | |||  ||||  |||||||||||||| | |||| ||||||    
T  22544 aactcacatcaactcgtgcgacaaagatcgcatttagcataagcaagactttctgtaactgggtcattcgcaaggcga 22467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0309 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0309
Description:

Target: scaffold0309; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 59 - 107
Target Start/End: Original strand, 6917 - 6965
Alignment:
Q  59 tgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggt 107  Q
    ||||| |||||||||||||  |||||| |||||| ||||||||||||||    
T  6917 tgggtcactcgcgaggcgagagcctctgctcgccgtggcgagttcaggt 6965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0064 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0064
Description:

Target: scaffold0064; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 136 - 217
Target Start/End: Original strand, 47360 - 47442
Alignment:
Q  136 attccaggttcaatctcattctagaatcttttctaatcattatt--acatagttcaggcactcaaaaacctctaaggtccaact 217  Q
    ||||||||||||||||||| ||| | || || ||||||||||||  ||||| ||||| ||||||||| | |||||||| |||||    
T  47360 attccaggttcaatctcatcctacattcattcctaatcattattagacata-ttcagacactcaaaagcatctaaggttcaact 47442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0042
Description:

Target: scaffold0042; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 137 - 200
Target Start/End: Complemental strand, 24037 - 23973
Alignment:
Q  137 ttccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaa 200  Q
    |||||||||||||||||| ||| | | ||| ||||||||||||| | | ||||||||||||||||    
T  24037 ttccaggttcaatctcatcctacattttttcctaatcattattagacatgttcaggcactcaaaa 23973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 136 - 199
Target Start/End: Original strand, 51953 - 52017
Alignment:
Q  136 attccaggttcaatctcattctagaatcttttctaatcattattaca-tagttcaggcactcaaa 199  Q
    ||||||||||||||||| | ||| | ||||| ||||||||||||| | | |||||||||||||||    
T  51953 attccaggttcaatctcgtcctacattctttcctaatcattattagacttgttcaggcactcaaa 52017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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