View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15974_low_13 (Length: 334)
Name: NF15974_low_13
Description: NF15974
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15974_low_13 |
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Alignment Details
Target: chr4 (Bit Score: 216; Significance: 1e-118; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 216; E-Value: 1e-118
Query Start/End: Original strand, 101 - 324
Target Start/End: Complemental strand, 3304159 - 3303936
Alignment:
| Q |
101 |
ttctatgcaggaattgactatccgagaattttcctttcatcaactgaatgctaatttgctctggccaggaacttttgcatttgcagaatggttagttcaa |
200 |
Q |
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| T |
3304159 |
ttctatgcaggaattgattatccgagaattttcctttcatcaactgaatgctaatttgctctggccaggaacttttgcatttgcagaatggttagttcaa |
3304060 |
T |
|
| Q |
201 |
cacagatcatgcattgaaggacggcgtaccattgagttggggaggtattttaattactcacaaatcctttaatttatataagctataattcgcaatccta |
300 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |
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| T |
3304059 |
cacagatcatgcattgaaggacggcgtaccattgagttggggaggtattttaattactcacaaatcctttaatttatataagctataattcgcaacccta |
3303960 |
T |
|
| Q |
301 |
tttaaatcttaactcgatcctatg |
324 |
Q |
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|||||||||||||||||||||||| |
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| T |
3303959 |
tttaaatcttaactcgatcctatg |
3303936 |
T |
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