View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15974_low_14 (Length: 316)
Name: NF15974_low_14
Description: NF15974
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15974_low_14 |
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Alignment Details
Target: chr2 (Bit Score: 281; Significance: 1e-157; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 281; E-Value: 1e-157
Query Start/End: Original strand, 19 - 303
Target Start/End: Complemental strand, 11378996 - 11378712
Alignment:
| Q |
19 |
agtttcataccattgacaacaacaccaaaagacgactcattcacattgtggtccacaatctcaaagggacataaatgaaacctaacaaaatagtttccat |
118 |
Q |
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| T |
11378996 |
agtttcataccattgacaacaacaccaaaagacgactcattcacattgtggtccacaatctcaaagggacataaatgaaacctaacaaaatagtttccat |
11378897 |
T |
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| Q |
119 |
gaacatctttgatagtgtaattcaaagaagctgtgaaaattctagctgttttataaagtggctcatagattgaatttccacttaatccatcagtggaagc |
218 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
11378896 |
gaacatctttgatagtgtaattcaaagaagctgtgaaaattctagctgttttataaagtggctcatagattgaatttccacttaatccatcagtggaagc |
11378797 |
T |
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| Q |
219 |
aacaacaccaggagaagaactaagggtaacattgttattaggtgccatatcaccaatccacttcctaccatcaacattcacagaa |
303 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |
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| T |
11378796 |
aacaacaccaggagaagaactaagggtaacattgttattaggtgccatatcaccaatccatttcctaccatcaacattcacagaa |
11378712 |
T |
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