View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF15975_high_1 (Length: 439)

Name: NF15975_high_1
Description: NF15975
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF15975_high_1
NF15975_high_1
[»] chr5 (10 HSPs)
chr5 (12-439)||(30071693-30072116)
chr5 (207-370)||(3040218-3040379)
chr5 (210-399)||(30735282-30735467)
chr5 (206-390)||(40519150-40519329)
chr5 (206-380)||(30700827-30700999)
chr5 (210-390)||(25493790-25493966)
chr5 (314-367)||(24402035-24402088)
chr5 (206-366)||(20359904-20360064)
chr5 (207-339)||(34280064-34280194)
chr5 (207-248)||(24402154-24402195)
[»] chr1 (14 HSPs)
chr1 (207-370)||(35413015-35413176)
chr1 (207-366)||(29657357-29657514)
chr1 (207-370)||(10061581-10061738)
chr1 (210-370)||(35149625-35149783)
chr1 (239-367)||(43537135-43537261)
chr1 (223-370)||(26469933-26470078)
chr1 (244-399)||(21540036-21540187)
chr1 (248-366)||(23906605-23906721)
chr1 (282-367)||(11470016-11470101)
chr1 (304-370)||(49313596-49313662)
chr1 (210-269)||(49401988-49402047)
chr1 (207-268)||(44958465-44958524)
chr1 (207-269)||(48852731-48852793)
chr1 (206-255)||(34475808-34475857)
[»] chr2 (19 HSPs)
chr2 (207-370)||(20142957-20143118)
chr2 (212-399)||(13716673-13716856)
chr2 (204-390)||(19945679-19945861)
chr2 (207-354)||(14131161-14131306)
chr2 (213-354)||(27007174-27007313)
chr2 (242-390)||(37714394-37714538)
chr2 (239-370)||(38320190-38320319)
chr2 (207-369)||(3167886-3168045)
chr2 (207-366)||(32975978-32976137)
chr2 (295-390)||(37899547-37899640)
chr2 (275-370)||(35457390-35457484)
chr2 (206-370)||(27407411-27407572)
chr2 (226-370)||(31645074-31645217)
chr2 (214-366)||(4434290-4434443)
chr2 (207-290)||(31264827-31264908)
chr2 (205-269)||(37899469-37899533)
chr2 (283-370)||(24183960-24184047)
chr2 (199-233)||(24184084-24184118)
chr2 (227-320)||(31845453-31845544)
[»] chr6 (8 HSPs)
chr6 (208-370)||(32871711-32871872)
chr6 (205-390)||(6784658-6784839)
chr6 (207-390)||(34713472-34713651)
chr6 (209-370)||(2130452-2130611)
chr6 (225-366)||(28867178-28867317)
chr6 (205-323)||(3855692-3855807)
chr6 (314-366)||(6519233-6519285)
chr6 (315-367)||(11301828-11301880)
[»] chr8 (9 HSPs)
chr8 (203-370)||(38585042-38585207)
chr8 (207-380)||(29414361-29414532)
chr8 (209-332)||(5718407-5718528)
chr8 (209-329)||(25124400-25124518)
chr8 (315-370)||(29543676-29543731)
chr8 (208-367)||(33543341-33543494)
chr8 (209-390)||(24068076-24068253)
chr8 (273-354)||(26415557-26415638)
chr8 (239-339)||(5686280-5686378)
[»] chr3 (10 HSPs)
chr3 (223-354)||(26442954-26443083)
chr3 (205-354)||(18271919-18272066)
chr3 (205-367)||(1632801-1632960)
chr3 (207-366)||(45852892-45853049)
chr3 (207-367)||(2671895-2672053)
chr3 (240-366)||(34905839-34905963)
chr3 (207-339)||(31192079-31192209)
chr3 (315-366)||(10593524-10593575)
chr3 (207-263)||(1713936-1713992)
chr3 (322-380)||(3169319-3169377)
[»] chr7 (12 HSPs)
chr7 (207-354)||(46413701-46413849)
chr7 (205-370)||(23611706-23611868)
chr7 (239-390)||(21882759-21882906)
chr7 (228-366)||(22631473-22631609)
chr7 (206-366)||(20125583-20125741)
chr7 (275-370)||(46297602-46297697)
chr7 (282-366)||(24250485-24250569)
chr7 (207-390)||(8123662-8123841)
chr7 (207-366)||(19511403-19511560)
chr7 (239-340)||(1985025-1985124)
chr7 (314-370)||(44600997-44601053)
chr7 (288-366)||(23730540-23730618)
[»] chr4 (17 HSPs)
chr4 (210-395)||(42504155-42504333)
chr4 (208-370)||(37762794-37762956)
chr4 (206-366)||(5288515-5288673)
chr4 (200-367)||(24060568-24060731)
chr4 (282-366)||(25817658-25817742)
chr4 (273-359)||(19482518-19482604)
chr4 (224-349)||(30220711-30220832)
chr4 (273-354)||(29065300-29065381)
chr4 (314-362)||(41545412-41545460)
chr4 (207-264)||(19663375-19663432)
chr4 (210-269)||(19663274-19663333)
chr4 (215-269)||(19482801-19482855)
chr4 (273-370)||(2765390-2765487)
chr4 (205-343)||(16528579-16528718)
chr4 (313-390)||(13218427-13218501)
chr4 (316-367)||(42108751-42108802)
chr4 (322-370)||(41485726-41485774)
[»] scaffold0194 (1 HSPs)
scaffold0194 (207-322)||(27067-27180)
[»] scaffold0018 (1 HSPs)
scaffold0018 (273-370)||(69947-70044)
[»] scaffold0122 (1 HSPs)
scaffold0122 (242-366)||(18627-18749)


Alignment Details
Target: chr5 (Bit Score: 362; Significance: 0; HSPs: 10)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 362; E-Value: 0
Query Start/End: Original strand, 12 - 439
Target Start/End: Complemental strand, 30072116 - 30071693
Alignment:
Q  12 tcatcaatatgcaaggtggaggtttgtagttatcgatttagaggaagatgtaaaatgacatggtaagaataatggatacccattgagatttgagaatcac 111  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30072116 tcatcaatatgcaaggtggaggtttgtagttatcgatttagaggaagatgtaaaatgacatggtaagaataatggatacccattgagatttgagaatcac 30072017  T
Q  112 tgaccgtgggagaagaatggttcagtcttatgagagtgagtagaaattgtgcattaacatatgtaaagtaaacaaaattaatcatcatttataatgggaa 211  Q
    ||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30072016 tgaccgtgggagaagaatggttcaaccttatgagagtgagtagaaattgtgcattaacatatgtaaagtaaacaaaattaatcatcatttataatgggaa 30071917  T
Q  212 atgatagatagagtgacaaaatttatgaagaaaatttcaagacaatgtatttgctaactctcctttcctcaattacacaccactacctcccatgatttcc 311  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||  |||||||||||||||||||||||||| |||||||||||    
T  30071916 atgatagatagagtgacaaaatttatgaagaaaattttaagacaatgtatttgctaactc--ctttcctcaattacacaccactaccttccatgatttcc 30071819  T
Q  312 aacaaataacaaatttaattggttgagaccttttcttgttaaattcttgataaaaactcccgataaataaatagcaatgatcatttataattgctggagt 411  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||    || ||||||||||||| |||||||||||||| |||||    
T  30071818 aacaaataataaatttaattggttgagaccttttcttgttaaattctagataaaaactctt--tagataaatagcaatgctcatttataattgcgggagt 30071721  T
Q  412 aggttgactaataaatgtttttagcgct 439  Q
    ||||||||||||||||||||||||||||    
T  30071720 aggttgactaataaatgtttttagcgct 30071693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 207 - 370
Target Start/End: Original strand, 3040218 - 3040379
Alignment:
Q  207 gggaaatgatagatagagtgacaaaatttatgaagaaaatttcaagacaatgtatttgctaactctcctttcctcaattacacaccactacctcccatga 306  Q
    ||||||| ||||| | ||||||||||||||| |||||||||| |||||| ||||||||||||| |  ||||||| |||||||||||| |||||||| |||    
T  3040218 gggaaataatagacacagtgacaaaatttatcaagaaaattttaagacagtgtatttgctaacac--ctttccttaattacacaccattacctcccttga 3040315  T
Q  307 tttccaacaaataacaaatttaattggttgagaccttttcttgttaaattcttgataaaaactc 370  Q
    ||| || || |||||||||||||||| ||||||| |||||||| ||||||||||||||||||||    
T  3040316 ttttcaccagataacaaatttaattgattgagacattttcttgataaattcttgataaaaactc 3040379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 210 - 399
Target Start/End: Original strand, 30735282 - 30735467
Alignment:
Q  210 aaatgatagatagagtgacaaaatttatgaagaaaatttcaagacaatgtatttgctaactctcctttcctcaattacacaccactacctcccatgattt 309  Q
    ||||||||| || ||||||||||||||| ||||||||||||| ||| ||||||||||||| ||  ||| || |||||| || || |||||||| ||||||    
T  30735282 aaatgataggtacagtgacaaaatttatcaagaaaatttcaaaacagtgtatttgctaacact--ttttcttaattacccagcattacctcccttgattt 30735379  T
Q  310 ccaacaaataacaaatttaattggttgagaccttttcttgttaaattcttgataaaaactcccgataaataaatagcaatgatcatttat 399  Q
    ||  ||||||||||||||||||| ||||||| |||||||| || |||||| |||||||||  |  || ||||||||||||| ||||||||    
T  30735380 ccgccaaataacaaatttaattgattgagacattttcttgatatattcttaataaaaactatc--tagataaatagcaatgctcatttat 30735467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 206 - 390
Target Start/End: Complemental strand, 40519329 - 40519150
Alignment:
Q  206 tgggaaatgatagatagagtgacaaaatttatgaagaaaatttcaagacaatgtatttgctaactctcctttcctcaattacacaccactacctcccatg 305  Q
    |||||||||||| ||| |||||||||| |||| |||||||||| |||||| ||||||||| ||   |  ||| || ||||||||| || |||||||| ||    
T  40519329 tgggaaatgataaatacagtgacaaaaattatcaagaaaattttaagacagtgtatttgccaatatt--ttttcttaattacacatcattacctccc-tg 40519233  T
Q  306 atttccaacaaataacaaatttaattggttgagaccttttcttgttaaattcttgataaaaactcccgataaataaatagcaatg 390  Q
    ||||||| ||||||||||||||||||||||||||| | |||||  |||||||||||||||||||| |  || |||||||||||||    
T  40519232 atttccatcaaataacaaatttaattggttgagacttattcttaataaattcttgataaaaactctc--tagataaatagcaatg 40519150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 206 - 380
Target Start/End: Original strand, 30700827 - 30700999
Alignment:
Q  206 tgggaaatgatagatagagtgacaaaatttatgaagaaaatttcaagacaatgtatttgctaactctcctttcctcaattacacaccactacctcccatg 305  Q
    ||||||||||||| |  ||||||||||||||| || ||||||| |||||| ||||||||||||| |  |||| || ||||||||| || |||||||| |     
T  30700827 tgggaaatgataggtgcagtgacaaaatttatcaaaaaaattttaagacagtgtatttgctaacac--cttttcttaattacacaacattacctccctta 30700924  T
Q  306 atttccaacaaataacaaatttaattggttgagaccttttcttgttaaattcttgataaaaactcccgataaata 380  Q
    |||| |  ||||||||||||||||||| ||||||| |||||||  || ||| |||||||||||||  ||||||||    
T  30700925 attttcgtcaaataacaaatttaattgattgagacattttcttaatatatttttgataaaaactctagataaata 30700999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 210 - 390
Target Start/End: Complemental strand, 25493966 - 25493790
Alignment:
Q  210 aaatgatagatagagtgacaaaatttatgaagaaaatttcaagacaatgtatttgctaactctcctttcctcaattacacaccactacctcccatgattt 309  Q
    |||||||||||| |||||||| || |||  |||||||||||||||| | |||||| |||  |   |||||| |||||||||||| |||||||  ||||||    
T  25493966 aaatgatagatacagtgacaacatgtatccagaaaatttcaagacagtatatttgttaataca--tttccttaattacacaccattacctcctttgattt 25493869  T
Q  310 ccaacaaataacaaatttaattggttgagaccttttcttgttaaattcttgataaaaactcccgataaataaatagcaatg 390  Q
    |  ||||| ||||||||||||||| |||||| |||||||| | |||||||||||||||||| |  || |||||||||||||    
T  25493868 ctgacaaagaacaaatttaattggctgagacattttcttgatcaattcttgataaaaactctc--tagataaatagcaatg 25493790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 314 - 367
Target Start/End: Complemental strand, 24402088 - 24402035
Alignment:
Q  314 caaataacaaatttaattggttgagaccttttcttgttaaattcttgataaaaa 367  Q
    ||||||||||||||| |||||||||| ||||||||| |||||||||||||||||    
T  24402088 caaataacaaatttatttggttgagatcttttcttgataaattcttgataaaaa 24402035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 206 - 366
Target Start/End: Complemental strand, 20360064 - 20359904
Alignment:
Q  206 tgggaaatgatagatagagtgacaaaatttatgaagaaaatttcaagacaatgtatttgctaactctcctttcctcaattacacaccactacctcccatg 305  Q
    |||||||||||||||||||||||||| | ||| |||||| |||||||||  | ||||||||||  | |||||| | |||||||||||| || ||||  ||    
T  20360064 tgggaaatgatagatagagtgacaaactgtatcaagaaagtttcaagacggtatatttgctaa--cacctttctttaattacacaccattatctcctttg 20359967  T
Q  306 atttc--caacaaataacaaatttaattggttgagaccttttcttgttaaattcttgataaaa 366  Q
    |||||   || |  ||||| |||||||||   ||||| |||||||| | ||||||||||||||    
T  20359966 atttcaggaaaatttaacagatttaattgaccgagacattttcttgatcaattcttgataaaa 20359904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 207 - 339
Target Start/End: Original strand, 34280064 - 34280194
Alignment:
Q  207 gggaaatgatagatagagtgacaaaatttatgaagaaaatttcaagacaatgtatttgctaactctcctttcctcaattacacaccactacctcccatga 306  Q
    ||||||||||||||| ||||||| ||||||| || || |||| ||| || |||||||| |||  |  ||||||| ||||||| |||| || || || | |    
T  34280064 gggaaatgatagatacagtgacagaatttatcaataatattttaagtcagtgtatttgttaa--catctttccttaattacataccattatcttccttaa 34280161  T
Q  307 tttccaacaaataacaaatttaattggttgaga 339  Q
    |||||  ||||||||||||||||||| ||||||    
T  34280162 tttccgccaaataacaaatttaattgattgaga 34280194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 207 - 248
Target Start/End: Complemental strand, 24402195 - 24402154
Alignment:
Q  207 gggaaatgatagatagagtgacaaaatttatgaagaaaattt 248  Q
    ||||||||||||||| | ||||||||||||| ||||||||||    
T  24402195 gggaaatgatagatacaatgacaaaatttatcaagaaaattt 24402154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 93; Significance: 4e-45; HSPs: 14)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 207 - 370
Target Start/End: Complemental strand, 35413176 - 35413015
Alignment:
Q  207 gggaaatgatagatagagtgacaaaatttatgaagaaaatttcaagacaatgtatttgctaactctcctttcctcaattacacaccactacctcccatga 306  Q
    ||||||||||||||| | ||||||||||||| ||||||||||||||| | |||||||| |||| |  ||||||| |||||||||| | |||||||| |||    
T  35413176 gggaaatgatagatataatgacaaaatttatcaagaaaatttcaagagagtgtatttgttaacac--ctttccttaattacacactattacctcccttga 35413079  T
Q  307 tttccaacaaataacaaatttaattggttgagaccttttcttgttaaattcttgataaaaactc 370  Q
    |||||  |||||||||||||||||||||||||||||||||||| |||||| |||||||||||||    
T  35413078 tttccgtcaaataacaaatttaattggttgagaccttttcttgataaattattgataaaaactc 35413015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 207 - 366
Target Start/End: Complemental strand, 29657514 - 29657357
Alignment:
Q  207 gggaaatgatagatagagtgacaaaatttatgaagaaaatttcaagacaatgtatttgctaactctcctttcctcaattacacaccactacctcccatga 306  Q
    ||||||||||||||| ||||||||| ||||| ||||||||||||||||| ||||||||||||  | |||||||| ||||||| | || |||||||  |||    
T  29657514 gggaaatgatagatacagtgacaaattttatcaagaaaatttcaagacagtgtatttgctaa--cacctttccttaattacatatcattacctcctttga 29657417  T
Q  307 tttccaacaaataacaaatttaattggttgagaccttttcttgttaaattcttgataaaa 366  Q
    ||| |  ||||||||||||||||||||||||||||||||||||   |||| |||||||||    
T  29657416 ttttcggcaaataacaaatttaattggttgagaccttttcttgaccaatttttgataaaa 29657357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 207 - 370
Target Start/End: Complemental strand, 10061738 - 10061581
Alignment:
Q  207 gggaaatgatagatagagtgacaaaatttatgaagaaaatttcaagacaatgtatttgctaactctcctttcctcaattacacaccactacctcccatga 306  Q
    |||||||||||||||||    |||||||||| ||||||||||||||||| | ||||||||||| |   |||||| ||||||||| || |||||||| |||    
T  10061738 gggaaatgatagataga----caaaatttatcaagaaaatttcaagacagtttatttgctaacaca--tttccttaattacacatcattacctcccttga 10061645  T
Q  307 tttccaacaaataacaaatttaattggttgagaccttttcttgttaaattcttgataaaaactc 370  Q
    ||||   ||||||||||||||||||||||||||| |||| ||| ||||||||||||||||||||    
T  10061644 tttctgtcaaataacaaatttaattggttgagacttttttttgataaattcttgataaaaactc 10061581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 210 - 370
Target Start/End: Original strand, 35149625 - 35149783
Alignment:
Q  210 aaatgatagatagagtgacaaaatttatgaagaaaatttcaagacaatgtatttgctaactctcctttcctcaattacacaccactacctcccatgattt 309  Q
    ||||||||| || ||||||||||||||| || |||||||||||| ||||||||||||||| |  ||||||| ||||| ||| || || ||||| ||||||    
T  35149625 aaatgataggtacagtgacaaaatttatcaaaaaaatttcaagagaatgtatttgctaacac--ctttccttaattatacatcattatctcccttgattt 35149722  T
Q  310 ccaacaaataacaaatttaattggttgagaccttttcttgttaaattcttgataaaaactc 370  Q
        |||||||||||||||||||||| |||  |||||||| ||||||||||||||||||||    
T  35149723 atgtcaaataacaaatttaattggttaagatattttcttgataaattcttgataaaaactc 35149783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 239 - 367
Target Start/End: Original strand, 43537135 - 43537261
Alignment:
Q  239 aagaaaatttcaagacaatgtatttgctaactctcctttcctcaattacacaccactacctcccatgatttccaacaaataacaaatttaattggttgag 338  Q
    ||||||||||||||||| |||||||| |||| |   |||| | |||||||||||| |||||||| ||||||||  |||||||||||||||||||| ||||    
T  43537135 aagaaaatttcaagacagtgtatttgttaacaca--tttctttaattacacaccattacctcccttgatttccggcaaataacaaatttaattggctgag 43537232  T
Q  339 accttttcttgttaaattcttgataaaaa 367  Q
    ||||||||||| | |||||||||||||||    
T  43537233 accttttcttgattaattcttgataaaaa 43537261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 223 - 370
Target Start/End: Complemental strand, 26470078 - 26469933
Alignment:
Q  223 agtgacaaaatttatgaagaaaatttcaagacaatgtatttgctaactctcctttcctcaattacacaccactacctcccatgatttccaacaaataaca 322  Q
    ||||| ||||||||| |||||||||| || ||| ||||||||||||| |  ||||||| |||||||||||| || || |  |||||| ||  |||||| |    
T  26470078 agtgataaaatttatcaagaaaattttaaaacagtgtatttgctaacac--ctttccttaattacacaccattatcttctttgattttcattaaataata 26469981  T
Q  323 aatttaattggttgagaccttttcttgttaaattcttgataaaaactc 370  Q
    ||||||||| |||||||| |||||||| ||||||||||||||||||||    
T  26469980 aatttaatttgttgagacattttcttgataaattcttgataaaaactc 26469933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 244 - 399
Target Start/End: Complemental strand, 21540187 - 21540036
Alignment:
Q  244 aatttcaagacaatgtatttgctaactctcctttcctcaattacacaccactacctcccatgatttccaacaaataacaaatttaattggttgagacctt 343  Q
    |||||||||||| |||||||| |||| |  ||||| | ||||||||  || || ||||| | ||||||  |||||||||||||||||||| |||||| ||    
T  21540187 aatttcaagacagtgtatttgttaacac--ctttctttaattacacttcattatctcccttaatttccgccaaataacaaatttaattggctgagacatt 21540090  T
Q  344 ttcttgttaaattcttgataaaaactcccgataaataaatagcaatgatcatttat 399  Q
    |||||| ||| |||||||||||||||| |  |||||||||||||||| || |||||    
T  21540089 ttcttgataatttcttgataaaaactctc--taaataaatagcaatgctcttttat 21540036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 248 - 366
Target Start/End: Original strand, 23906605 - 23906721
Alignment:
Q  248 tcaagacaatgtatttgctaactctcctttcctcaattacacaccactacctcccatgatttccaacaaataacaaatttaattggttgagaccttttct 347  Q
    |||||||||||||||||||||| |  ||||| | |||||||||||| |||||| | ||||||    |||||||||||||||||||| ||| || ||||||    
T  23906605 tcaagacaatgtatttgctaacac--ctttctttaattacacaccattacctctcttgatttgtggcaaataacaaatttaattggctgaaactttttct 23906702  T
Q  348 tgttaaattcttgataaaa 366  Q
    || | ||||||||||||||    
T  23906703 tgatcaattcttgataaaa 23906721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 282 - 367
Target Start/End: Complemental strand, 11470101 - 11470016
Alignment:
Q  282 aattacacaccactacctcccatgatttccaacaaataacaaatttaattggttgagaccttttcttgttaaattcttgataaaaa 367  Q
    ||||||||| || |||||||| ||||||||  |||||||||||||||||||||| |||  |||||||| ||||||||| |||||||    
T  11470101 aattacacatcattacctcccttgatttccgccaaataacaaatttaattggttaagatattttcttgataaattcttaataaaaa 11470016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 304 - 370
Target Start/End: Complemental strand, 49313662 - 49313596
Alignment:
Q  304 tgatttccaacaaataacaaatttaattggttgagaccttttcttgttaaattcttgataaaaactc 370  Q
    |||||||| || ||||||||||||||||  ||||||| |||||||| | ||||||||||||||||||    
T  49313662 tgatttccgactaataacaaatttaattaattgagacattttcttgatcaattcttgataaaaactc 49313596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 210 - 269
Target Start/End: Complemental strand, 49402047 - 49401988
Alignment:
Q  210 aaatgatagatagagtgacaaaatttatgaagaaaatttcaagacaatgtatttgctaac 269  Q
    |||||||||||| ||||||||||||||| || || |||||||  ||||||||||||||||    
T  49402047 aaatgatagatacagtgacaaaatttatcaaaaagatttcaaaccaatgtatttgctaac 49401988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 207 - 268
Target Start/End: Original strand, 44958465 - 44958524
Alignment:
Q  207 gggaaatgatagatagagtgacaaaatttatgaagaaaatttcaagacaatgtatttgctaa 268  Q
    ||||||||||||||||  ||||||||| ||| |||||||||| |||| | ||||||||||||    
T  44958465 gggaaatgatagatag--tgacaaaatgtattaagaaaatttgaagagagtgtatttgctaa 44958524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 207 - 269
Target Start/End: Complemental strand, 48852793 - 48852731
Alignment:
Q  207 gggaaatgatagatagagtgacaaaatttatgaagaaaatttcaagacaatgtatttgctaac 269  Q
    ||||||||||||||  ||||||||||||||| || ||| ||| || |||||||||||| ||||    
T  48852793 gggaaatgatagatccagtgacaaaatttatcaaaaaatttttaaaacaatgtatttgttaac 48852731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 206 - 255
Target Start/End: Complemental strand, 34475857 - 34475808
Alignment:
Q  206 tgggaaatgatagatagagtgacaaaatttatgaagaaaatttcaagaca 255  Q
    ||||||||||| |||| ||||||||||| ||| |||||||||| ||||||    
T  34475857 tgggaaatgatggatacagtgacaaaatgtattaagaaaattttaagaca 34475808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 89; Significance: 1e-42; HSPs: 19)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 207 - 370
Target Start/End: Complemental strand, 20143118 - 20142957
Alignment:
Q  207 gggaaatgatagatagagtgacaaaatttatgaagaaaatttcaagacaatgtatttgctaactctcctttcctcaattacacaccactacctcccatga 306  Q
    ||||||||||||||| ||||||||||||||| ||||||||||||||| | ||||||| ||||| |  ||||||| ||||||||| || ||||| || |||    
T  20143118 gggaaatgatagatacagtgacaaaatttatcaagaaaatttcaagatagtgtattttctaacac--ctttccttaattacacatcattaccttccttga 20143021  T
Q  307 tttccaacaaataacaaatttaattggttgagaccttttcttgttaaattcttgataaaaactc 370  Q
    |||||  ||||||| ||||||||||||||||||| |||||||| ||||||||||||||||||||    
T  20143020 tttccgccaaataataaatttaattggttgagactttttcttgataaattcttgataaaaactc 20142957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 212 - 399
Target Start/End: Original strand, 13716673 - 13716856
Alignment:
Q  212 atgatagatagagtgacaaaatttatgaagaaaatttcaagacaatgtatttgctaactctcctttcctcaattacacaccactacctcccatgatttcc 311  Q
    |||||||||| ||||||||||||||| ||||||||||||| ||| ||||||||||||| |  |||| || |||||||||| | |||||||  |||||| |    
T  13716673 atgatagatacagtgacaaaatttatcaagaaaatttcaaaacagtgtatttgctaacac--cttttcttaattacacactattacctcctttgattttc 13716770  T
Q  312 aacaaataacaaatttaattggttgagaccttttcttgttaaattcttgataaaaactcccgataaataaatagcaatgatcatttat 399  Q
      ||||| ||||||||||||||||||||| |||||||| |||||||||||||||||||| |  || ||||||||||||| || |||||    
T  13716771 gccaaatcacaaatttaattggttgagactttttcttgataaattcttgataaaaactctc--tagataaatagcaatgctcttttat 13716856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 204 - 390
Target Start/End: Original strand, 19945679 - 19945861
Alignment:
Q  204 aatgggaaatgatagatagagtgacaaaatttatgaagaaaatttcaagacaatgtatttgctaactctcctttcctcaattacacaccactacctccca 303  Q
    ||||| |||||||||||| ||||||||||||||| |||||||||| |||||| |||||||| ||| | | ||||||| |||||||||||| ||||||||     
T  19945679 aatggaaaatgatagatacagtgacaaaatttatcaagaaaattttaagacagtgtatttgttaa-tat-ctttccttaattacacaccattacctccct 19945776  T
Q  304 tgatttccaacaaataacaaatttaattggttgagaccttttcttgttaaattcttgataaaaactcccgataaataaatagcaatg 390  Q
    | ||||||  |||||||||||||||||||   ||||| |||| ||  ||||||||| |||||||||| |  ||||||||||||||||    
T  19945777 taatttccgtcaaataacaaatttaattgaccgagacatttttttaataaattcttaataaaaactctc--taaataaatagcaatg 19945861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 207 - 354
Target Start/End: Complemental strand, 14131306 - 14131161
Alignment:
Q  207 gggaaatgatagatagagtgacaaaatttatgaagaaaatttcaagacaatgtatttgctaactctcctttcctcaattacacaccactacctcccatga 306  Q
    ||||||||||||||| |||||||||||||||||||||||||| |||| | ||||||||||||  | | |||||| |||||||||||| || ||| | |||    
T  14131306 gggaaatgatagatacagtgacaaaatttatgaagaaaattttaagatagtgtatttgctaa--cacatttccttaattacacaccattatctcgcttga 14131209  T
Q  307 tttccaacaaataacaaatttaattggttgagaccttttcttgttaaa 354  Q
    |||||  ||||||||| |||||||||||  |||| |||||||| ||||    
T  14131208 tttccgccaaataacagatttaattggtccagacattttcttgataaa 14131161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 213 - 354
Target Start/End: Complemental strand, 27007313 - 27007174
Alignment:
Q  213 tgatagatagagtgacaaaatttatgaagaaaatttcaagacaatgtatttgctaactctcctttcctcaattacacaccactacctcccatgatttcca 312  Q
    ||||||||| ||||||||||||||| |||||||||| |||||| |||||||| |||| ||  |||||| || ||||||| | |||||||| ||||||||     
T  27007313 tgatagatacagtgacaaaatttatcaagaaaattttaagacagtgtatttgttaacact--tttccttaaatacacactattacctcccttgatttccg 27007216  T
Q  313 acaaataacaaatttaattggttgagaccttttcttgttaaa 354  Q
     ||||||||||||||| |||||||||||  ||||||| ||||    
T  27007215 ccaaataacaaatttatttggttgagacaatttcttgataaa 27007174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 242 - 390
Target Start/End: Complemental strand, 37714538 - 37714394
Alignment:
Q  242 aaaatttcaagacaatgtatttgctaactctcctttcctcaattacacaccactacctcccatgatttccaacaaataacaaatttaattggttgagacc 341  Q
    ||||||| ||| || ||||||||||||| |  ||||||| |||||||||||| || ||||  ||||||||| |||||||||||||||||||||||| |||    
T  37714538 aaaattttaaggcagtgtatttgctaacac--ctttccttaattacacaccattatctcctttgatttccatcaaataacaaatttaattggttgatacc 37714441  T
Q  342 ttttcttgttaaattcttgataaaaactcccgataaataaatagcaatg 390  Q
    |||||||| |||||  ||||||||||||| |  || |||||||||||||    
T  37714440 ttttcttgataaatcattgataaaaactctc--tagataaatagcaatg 37714394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 239 - 370
Target Start/End: Original strand, 38320190 - 38320319
Alignment:
Q  239 aagaaaatttcaagacaatgtatttgctaactctcctttcctcaattacacaccactacctcccatgatttccaacaaataacaaatttaattggttgag 338  Q
    |||||||||| |||||| |||||||| |||| |   |||||| | ||||||| || |||||||  ||||||||| ||||||||||||||||||||||||     
T  38320190 aagaaaattttaagacagtgtatttgataacaca--tttccttatttacacatcattacctcctttgatttccaccaaataacaaatttaattggttgaa 38320287  T
Q  339 accttttcttgttaaattcttgataaaaactc 370  Q
    | ||||||||| ||||||||||||||||||||    
T  38320288 aacttttcttgataaattcttgataaaaactc 38320319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 207 - 369
Target Start/End: Complemental strand, 3168045 - 3167886
Alignment:
Q  207 gggaaatgatagatagagtgacaaaatttatgaagaaaatttcaagacaatgtatttgctaactctcctttcctcaattacacaccactacctcccatga 306  Q
    ||||||||||||||| ||||||||||||||| ||||||||||  | | | | ||||||||||| |  ||||| | ||||||||| || ||||| |  |||    
T  3168045 gggaaatgatagata-agtgacaaaatttatcaagaaaatttttaaatagtatatttgctaacac--ctttctttaattacacatcattaccttctttga 3167949  T
Q  307 tttccaacaaataacaaatttaattggttgagaccttttcttgttaaattcttgataaaaact 369  Q
    ||||| |||||||| |||||||||||||||||||||||||||   |||||||| |||||||||    
T  3167948 tttccgacaaataataaatttaattggttgagaccttttcttaacaaattcttaataaaaact 3167886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 207 - 366
Target Start/End: Original strand, 32975978 - 32976137
Alignment:
Q  207 gggaaatgatagatagagtgacaaaatttatgaagaaaatttcaagacaatgtatttgctaactctcctttcctcaattacacaccact--acctcccat 304  Q
    ||||||||||||||| |  ||||| || ||| ||||||||||||| ||| ||||||| ||||| |  |||| || ||||||| |||| |  |||| |  |    
T  32975978 gggaaatgatagatacatcgacaatatgtatcaagaaaatttcaaaacagtgtatttactaacac--cttttcttaattacataccattttaccttcttt 32976075  T
Q  305 gatttccaacaaataacaaatttaattggttgagaccttttcttgttaaattcttgataaaa 366  Q
    ||||||| |||||||||||||||||||||||||||| |||||||| | ||||||||||||||    
T  32976076 gatttccgacaaataacaaatttaattggttgagacattttcttgatcaattcttgataaaa 32976137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 295 - 390
Target Start/End: Original strand, 37899547 - 37899640
Alignment:
Q  295 tacctcccatgatttccaacaaataacaaatttaattggttgagaccttttcttgttaaattcttgataaaaactcccgataaataaatagcaatg 390  Q
    |||||||  |||||| | |||||| |||||||||||||||||| ||||||||||| |||||| ||||||||||||| |  || |||||||||||||    
T  37899547 tacctcctttgattttcgacaaatcacaaatttaattggttgaaaccttttcttgataaatttttgataaaaactctc--tagataaatagcaatg 37899640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 275 - 370
Target Start/End: Complemental strand, 35457484 - 35457390
Alignment:
Q  275 tttcctcaattacacaccactacctcccatgatttccaacaaataacaaatttaattggttgagaccttttcttgttaaattcttgataaaaactc 370  Q
    |||||| |||||||||||| |||||||  ||||||||   |||||| ||||||||||| |||| ||||||||||  ||||||||||||||||||||    
T  35457484 tttccttaattacacaccattacctcctttgatttccgctaaataataaatttaattgattgaaaccttttctt-ataaattcttgataaaaactc 35457390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 206 - 370
Target Start/End: Complemental strand, 27407572 - 27407411
Alignment:
Q  206 tgggaaatgatagatagagtgacaaaatttatgaagaaaatttcaagacaatgtatttgctaactctcctttcctcaattacacaccactacctcccatg 305  Q
    |||||||||||||||| ||||||||| |  | ||| ||||||| |||| | ||||||||||||  |   |||||| ||||||||| || || || || ||    
T  27407572 tgggaaatgatagatacagtgacaaactcaa-gaacaaaattttaagatactgtatttgctaataca--tttccttaattacacagcattatcttccttg 27407476  T
Q  306 atttccaacaaataacaaatttaattggttgagaccttttcttgttaaattcttgataaaaactc 370  Q
    ||||||   ||||||||||||||||||| ||| | ||||||||| | ||||||||||||| ||||    
T  27407475 atttccggtaaataacaaatttaattggctgatatcttttcttgatcaattcttgataaacactc 27407411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 226 - 370
Target Start/End: Original strand, 31645074 - 31645217
Alignment:
Q  226 gacaaaatttatgaagaaaatttcaagacaatgtatttgctaactctcctttcctcaattacacaccactacctcccatgatttccaacaaataacaaat 325  Q
    |||||||||||| | |||||||| |||| ||||||||||||||| | ||||| || ||||||||| || ||| |  | ||||||||  ||||| | ||||    
T  31645074 gacaaaatttatca-gaaaattttaagagaatgtatttgctaacac-ccttttcttaattacacatcattacgtttcttgatttccgccaaattaaaaat 31645171  T
Q  326 ttaattggttgagac-cttttcttgttaaattcttgataaaaactc 370  Q
    |||||||||| ||||  |||| ||| ||||||||||||||||||||    
T  31645172 ttaattggttaagacattttttttgataaattcttgataaaaactc 31645217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 214 - 366
Target Start/End: Complemental strand, 4434443 - 4434290
Alignment:
Q  214 gatagatagagtgacaaaatttatgaagaaaatttcaagacaatgtatttgctaactctcctttcctcaattacacaccactacctcc---catgatttc 310  Q
    |||| ||| ||||||||| | ||| ||||||||||||| ||||| ||||||| ||| |   ||| || |||||||||||| |||||||   | ||||||     
T  4434443 gatatatacagtgacaaactgtattaagaaaatttcaaaacaatatatttgccaacaca--tttacttaattacacaccattacctcctcccttgatttt 4434346  T
Q  311 caacaaataacaaatttaattggttgagaccttttcttgttaaattcttgataaaa 366  Q
    |  |||||||||||||||||||  || |||||||||||| | ||||||| ||||||    
T  4434345 cggcaaataacaaatttaattgactgggaccttttcttgatcaattcttaataaaa 4434290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 207 - 290
Target Start/End: Complemental strand, 31264908 - 31264827
Alignment:
Q  207 gggaaatgatagatagagtgacaaaatttatgaagaaaatttcaagacaatgtatttgctaactctcctttcctcaattacaca 290  Q
    ||||||||||||||| ||||||||||||||| ||  |||||| |||| | ||||||||||||| ||  |||||| |||||||||    
T  31264908 gggaaatgatagatacagtgacaaaatttatcaaacaaattttaagatagtgtatttgctaacact--tttccttaattacaca 31264827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 205 - 269
Target Start/End: Original strand, 37899469 - 37899533
Alignment:
Q  205 atgggaaatgatagatagagtgacaaaatttatgaagaaaatttcaagacaatgtatttgctaac 269  Q
    ||||||||||||||||| ||||||||||| ||| |||||| |||  ||||||||||||| |||||    
T  37899469 atgggaaatgatagatacagtgacaaaatgtatcaagaaattttttagacaatgtatttactaac 37899533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 283 - 370
Target Start/End: Complemental strand, 24184047 - 24183960
Alignment:
Q  283 attacacaccactacctcccatgatttccaacaaataacaaatttaattggttgagaccttttcttgttaaattcttgataaaaactc 370  Q
    ||||||||||| ||||||   ||| ||||  ||||||| |||||||||||| ||| ||||||||||| |||||| |  ||||||||||    
T  24184047 attacacaccattacctctattgagttccggcaaataataaatttaattggctgaaaccttttcttgataaattatgaataaaaactc 24183960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 199 - 233
Target Start/End: Complemental strand, 24184118 - 24184084
Alignment:
Q  199 tttataatgggaaatgatagatagagtgacaaaat 233  Q
    ||||||||||||||||||||||| |||||||||||    
T  24184118 tttataatgggaaatgatagatacagtgacaaaat 24184084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 227 - 320
Target Start/End: Complemental strand, 31845544 - 31845453
Alignment:
Q  227 acaaaatttatgaagaaaatttcaagacaatgtatttgctaactctcctttcctcaattacacaccactacctcccatgatttccaacaaataa 320  Q
    ||||| ||||| ||||||||||  ||||| |||||||||||||    ||| ||| |||||||||||| |||||| | |||||||| ||||||||    
T  31845544 acaaattttatcaagaaaatttttagacagtgtatttgctaacat--cttaccttaattacacaccattacctctcttgatttccgacaaataa 31845453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 85; Significance: 2e-40; HSPs: 8)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 208 - 370
Target Start/End: Original strand, 32871711 - 32871872
Alignment:
Q  208 ggaaatgatagatagagtgacaaaatttatgaagaaaatttc-aagacaatgtatttgctaactctcctttcctcaattacacaccactacctcccatga 306  Q
    |||||||||||||| | ||||||||||||| ||||||||||| |||||| ||||||| |||||  |  |||||| |||||||||| | |||||||| |||    
T  32871711 ggaaatgatagatacaatgacaaaatttatcaagaaaatttctaagacagtgtatttactaacatt--tttccttaattacacactattacctcccttga 32871808  T
Q  307 tttccaacaaataacaaatttaattggttgagaccttttcttgttaaattcttgataaaaactc 370  Q
    |||||  |||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||    
T  32871809 tttccgtcaaataacaaatttaattggttgaaaccttttcttgataaattcttgataaaaactc 32871872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 205 - 390
Target Start/End: Original strand, 6784658 - 6784839
Alignment:
Q  205 atgggaaatgatagatagagtgacaaaatttatgaagaaaatttcaagacaatgtatttgctaactctcctttcctcaattacacaccactacctcccat 304  Q
    ||||||||||||||||| |||||||||||  || ||||||||||| ||| | ||||||||||||| |  |||| || |||||||||||| || ||||| |    
T  6784658 atgggaaatgatagatatagtgacaaaatgcatcaagaaaatttcgagatagtgtatttgctaacac--cttttcttaattacacaccattatctccctt 6784755  T
Q  305 gatttccaacaaataacaaatttaattggttgagaccttttcttgttaaattcttgataaaaactcccgataaataaatagcaatg 390  Q
    ||||||| ||||||||||||||||||||| ||||| ||||| ||| |||||| ||||||||||||| |  || |||||||||||||    
T  6784756 gatttccgacaaataacaaatttaattggctgagatcttttattgataaattgttgataaaaactctc--tagataaatagcaatg 6784839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 207 - 390
Target Start/End: Complemental strand, 34713651 - 34713472
Alignment:
Q  207 gggaaatgatagatagagtgacaaaatttatgaagaaaatttcaagacaatgtatttgctaactctcctttcctcaattacacaccactacctcccatga 306  Q
    ||||||||||||||| ||||||||||||||| |||||||||| |||| | |||||||| |||| |  |||| || || ||||||||| ||| |||| |||    
T  34713651 gggaaatgatagatacagtgacaaaatttatcaagaaaattttaagatagtgtatttgttaacac--cttttcttaaatacacaccattacatcccttga 34713554  T
Q  307 tttccaacaaataacaaatttaattggttgagaccttttcttgttaaattcttgataaaaactcccgataaataaatagcaatg 390  Q
    ||| |  |||||||||||||||||| ||||||||  ||||||| |||||||||||||||||||| |  | ||||||||||||||    
T  34713553 ttttcgccaaataacaaatttaattagttgagacaatttcttgataaattcttgataaaaactctc--tgaataaatagcaatg 34713472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 209 - 370
Target Start/End: Original strand, 2130452 - 2130611
Alignment:
Q  209 gaaatgatagatagagtgacaaaatttatgaagaaaatttcaagacaatgtatttgctaactctcctttcctcaattacacaccactacctcccatgatt 308  Q
    ||||||||||||| | | | ||||||||| ||||||||||||| ||  ||||||||||||| |  ||||||| |||||||||| |  ||||||  |||||    
T  2130452 gaaatgatagatataatcataaaatttatcaagaaaatttcaaaacggtgtatttgctaacac--ctttccttaattacacacaatcacctcctttgatt 2130549  T
Q  309 tccaacaaataacaaatttaattggttgagaccttttcttgttaaattcttgataaaaactc 370  Q
    |||  ||||||||||||||||||||||||||  |||||||| |||||| || || |||||||    
T  2130550 tccgccaaataacaaatttaattggttgagattttttcttgataaattttttattaaaactc 2130611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 225 - 366
Target Start/End: Complemental strand, 28867317 - 28867178
Alignment:
Q  225 tgacaaaatttatgaagaaaatttcaagacaatgtatttgctaactctcctttcctcaattacacaccactacctcccatgatttccaacaaataacaaa 324  Q
    ||||||| | ||| ||||||||||||||||||||||||||||||  |   |||||| ||||||| || | |||||||  |||||||||||||||||||||    
T  28867317 tgacaaattgtatcaagaaaatttcaagacaatgtatttgctaaaaca--tttccttaattacatactattacctcctttgatttccaacaaataacaaa 28867220  T
Q  325 tttaattggttgagaccttttcttgttaaattcttgataaaa 366  Q
    |||||||| |||| || |||||||  | ||||||||||||||    
T  28867219 tttaattgattgaaactttttcttaatcaattcttgataaaa 28867178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 205 - 323
Target Start/End: Original strand, 3855692 - 3855807
Alignment:
Q  205 atgggaaatgatagatagagtgacaaaatttatgaagaaaatttcaagacaatgtatttgctaactctcctttcctcaattacacaccactacctcccat 304  Q
    ||||||||||||||||| ||||||||||||||| ||||||||||||||||| |||| |||||||  | |||||||| |||||||||  | ||| |||| |    
T  3855692 atgggaaatgatagatacagtgacaaaatttatcaagaaaatttcaagacagtgta-ttgctaa--cacctttccttaattacacattattacatccctt 3855788  T
Q  305 gatttccaacaaataacaa 323  Q
     ||||||  ||||||||||    
T  3855789 aatttccgtcaaataacaa 3855807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 314 - 366
Target Start/End: Complemental strand, 6519285 - 6519233
Alignment:
Q  314 caaataacaaatttaattggttgagaccttttcttgttaaattcttgataaaa 366  Q
    |||||||||||||||||||  |||||| |||||||| | |||| |||||||||    
T  6519285 caaataacaaatttaattgactgagacattttcttgatcaatttttgataaaa 6519233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 315 - 367
Target Start/End: Complemental strand, 11301880 - 11301828
Alignment:
Q  315 aaataacaaatttaattggttgagaccttttcttgttaaattcttgataaaaa 367  Q
    |||||||||||| |||||  |||||||||||| || | |||||||||||||||    
T  11301880 aaataacaaattcaattgactgagaccttttcatgatcaattcttgataaaaa 11301828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 73; Significance: 3e-33; HSPs: 9)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 203 - 370
Target Start/End: Original strand, 38585042 - 38585207
Alignment:
Q  203 taatgggaaatgatagatagagtgacaaaatttatgaagaaaatttcaagacaatgtatttgctaactctcctttcctcaattacacaccactacctccc 302  Q
    ||||||||||||||||||  | ||||||||||||| |||||||||||||  |||||||||||||||| ||  |||| | |||||||||| | |||||||     
T  38585042 taatgggaaatgatagatccaatgacaaaatttatcaagaaaatttcaaagcaatgtatttgctaacact--tttctttaattacacacaattacctcct 38585139  T
Q  303 atgatttccaacaaataacaaatttaattggttgagaccttttcttgttaaattcttgataaaaactc 370  Q
     ||||||||  ||||| ||||||||||||  |||| || |||||||| ||||||||||||||||||||    
T  38585140 ttgatttccgccaaatgacaaatttaattaattgaaacattttcttgataaattcttgataaaaactc 38585207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 207 - 380
Target Start/End: Complemental strand, 29414532 - 29414361
Alignment:
Q  207 gggaaatgatagatagagtgacaaaatttatgaagaaaatttcaagacaatgtatttgctaactctcctttcctcaattacacaccactacctcccatga 306  Q
    |||||||||||||||   ||| ||||| ||| ||||||||||||| ||| || ||||| |||| |  ||||||| ||||| |||||| ||||| || |||    
T  29414532 gggaaatgatagataccttgataaaatatatcaagaaaatttcaaaacagtgcatttgttaacac--ctttccttaattaaacaccattaccttccttga 29414435  T
Q  307 tttccaacaaataacaaatttaattggttgagaccttttcttgttaaattcttgataaaaactcccgataaata 380  Q
    ||| |  |||||||||||||||||||| |||||| |||||||| | |||| |||||||||||||  ||||||||    
T  29414434 ttttcggcaaataacaaatttaattggctgagacattttcttgatcaatttttgataaaaactctagataaata 29414361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 209 - 332
Target Start/End: Original strand, 5718407 - 5718528
Alignment:
Q  209 gaaatgatagatagagtgacaaaatttatgaagaaaatttcaagacaatgtatttgctaactctcctttcctcaattacacaccactacctcccatgatt 308  Q
    ||||||||||||| | ||||||| | ||| |||||||||| |||||| ||||||||||||| |   |||||| |||||||||||| ||||| || |||||    
T  5718407 gaaatgatagatacaatgacaaactatatcaagaaaattttaagacagtgtatttgctaacaca--tttccttaattacacaccattaccttccttgatt 5718504  T
Q  309 tccaacaaataacaaatttaattg 332  Q
    ||| |||||||| |||||||||||    
T  5718505 tccgacaaataataaatttaattg 5718528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 209 - 329
Target Start/End: Complemental strand, 25124518 - 25124400
Alignment:
Q  209 gaaatgatagatagagtgacaaaatttatgaagaaaatttcaagacaatgtatttgctaactctcctttcctcaattacacaccactacctcccatgatt 308  Q
    ||||||||||||| ||||||||||||||| ||||||||||||||||| |||||||| |||    ||||| || ||||||||| || || ||| | |||||    
T  25124518 gaaatgatagatacagtgacaaaatttatcaagaaaatttcaagacagtgtatttgttaa--taccttttcttaattacacatcattatctctcttgatt 25124421  T
Q  309 tccaacaaataacaaatttaa 329  Q
    |||  |||||||||| |||||    
T  25124420 tccgccaaataacaactttaa 25124400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 315 - 370
Target Start/End: Original strand, 29543676 - 29543731
Alignment:
Q  315 aaataacaaatttaattggttgagaccttttcttgttaaattcttgataaaaactc 370  Q
    |||||||||||||||||||||||||  |||||||| |||||| |||||||||||||    
T  29543676 aaataacaaatttaattggttgagatattttcttgataaatttttgataaaaactc 29543731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 208 - 367
Target Start/End: Complemental strand, 33543494 - 33543341
Alignment:
Q  208 ggaaatgatagatagagtgacaaaatttatgaagaaaatttcaagacaatgtatttgctaactctcctttcctcaattacacaccactacctcccatgat 307  Q
    ||||||||||||||   ||||||||||||| |||||||| |||||||| | |||||| |||  | |||||  | ||||||||| || || ||||| ||||    
T  33543494 ggaaatgatagatac--tgacaaaatttatcaagaaaatatcaagacagtatatttgttaa--cacctttttttaattacaca-cattatctcccttgat 33543400  T
Q  308 ttccaacaaataacaaatttaattggttgagaccttttcttgttaaattcttgataaaaa 367  Q
    |||   |||||||||||||| |||||||||||| |||| ||  |||||| ||||||||||    
T  33543399 ttcagccaaataacaaattttattggttgagacatttt-tttataaatttttgataaaaa 33543341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 209 - 390
Target Start/End: Original strand, 24068076 - 24068253
Alignment:
Q  209 gaaatgatagatagagtgacaaaatttatgaagaaaatttcaagacaa-tgtatttgctaactctcctttcctcaattacacaccactacctcccatgat 307  Q
    ||||||||||||| ||||||||| | ||| |||||||| | |||||   ||||||| |||||    ||||||| ||||||||||||  ||||||  ||||    
T  24068076 gaaatgatagatacagtgacaaactgtattaagaaaatgttaagacttctgtatttcctaacat--ctttccttaattacacaccatcacctcctttgat 24068173  T
Q  308 ttccaacaaataacaaatttaattggttgagaccttttcttgttaaattcttgataaaaactcccgataaataaatagcaatg 390  Q
    ||    |||||||||||||||||||| |||||| |||||| | | |||||||||||||| ||| |  || |||||||||||||    
T  24068174 tttgg-caaataacaaatttaattggctgagactttttctcgatcaattcttgataaaatctctc--tagataaatagcaatg 24068253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 273 - 354
Target Start/End: Complemental strand, 26415638 - 26415557
Alignment:
Q  273 cctttcctcaattacacaccactacctcccatgatttccaacaaataacaaatttaattggttgagaccttttcttgttaaa 354  Q
    |||||||| ||||||||| || || |||   | ||||||  ||||||| |||||||||||||||||||||||||||| ||||    
T  26415638 cctttccttaattacacatcattatctcttttaatttccgtcaaataataaatttaattggttgagaccttttcttgataaa 26415557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 239 - 339
Target Start/End: Original strand, 5686280 - 5686378
Alignment:
Q  239 aagaaaatttcaagacaatgtatttgctaactctcctttcctcaattacacaccactacctcccatgatttccaacaaataacaaatttaattggttgag 338  Q
    ||||||||||||||| |  |||||||||||| |   |||| | ||||||| |  | |||||||| ||||||||  ||||||||||||||||||| |||||    
T  5686280 aagaaaatttcaagatagcgtatttgctaacaca--tttcattaattacatattattacctcccttgatttccggcaaataacaaatttaattgattgag 5686377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 73; Significance: 3e-33; HSPs: 10)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 223 - 354
Target Start/End: Complemental strand, 26443083 - 26442954
Alignment:
Q  223 agtgacaaaatttatgaagaaaatttcaagacaatgtatttgctaactctcctttcctcaattacacaccactacctcccatgatttccaacaaataaca 322  Q
    ||||||||||||||| ||||||||||||||||| |||||||| |||| |  ||||  | |||||||||||| |||||||| ||||||||  |||||||||    
T  26443083 agtgacaaaatttatcaagaaaatttcaagacagtgtatttggtaacac--cttttgttaattacacaccattacctcccttgatttccgccaaataaca 26442986  T
Q  323 aatttaattggttgagaccttttcttgttaaa 354  Q
    ||||||||||||||||||||||||||| ||||    
T  26442985 aatttaattggttgagaccttttcttgataaa 26442954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 205 - 354
Target Start/End: Original strand, 18271919 - 18272066
Alignment:
Q  205 atgggaaatgatagatagagtgacaaaatttatgaagaaaatttcaagacaatgtatttgctaactctcctttcctcaattacacaccactacctcccat 304  Q
    |||| |||||||||||| ||||||||||||||| |||||||||| |||| |  |||||||||||| |  ||||| | |||||||||||| |||||||  |    
T  18271919 atggaaaatgatagatatagtgacaaaatttatcaagaaaattttaagatagagtatttgctaacac--ctttctttaattacacaccattacctccatt 18272016  T
Q  305 gatttccaacaaataacaaatttaattggttgagaccttttcttgttaaa 354  Q
    |||||||  ||||||||||||||||||||||||||  |||||||| ||||    
T  18272017 gatttccgccaaataacaaatttaattggttgagatattttcttgataaa 18272066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 205 - 367
Target Start/End: Complemental strand, 1632960 - 1632801
Alignment:
Q  205 atgggaaatgatagatagagtgacaaaatttatgaagaaaatttcaagacaatgtatttgctaactctcctttcctcaattacacaccactacctcccat 304  Q
    ||||||||||||||||| ||||||||||||||| || |||||| ||||||| |||||||| |||  | | |||| | |||||||||||| |||||||  |    
T  1632960 atgggaaatgatagatacagtgacaaaatttatcaaaaaaattccaagacagtgtatttgttaa--cacgtttctttaattacacaccattacctccttt 1632863  T
Q  305 gatttccaacaaataacaaatttaattggttgagaccttttcttgttaaattcttgataaaaa 367  Q
    |||||||   ||||||||||||||||| |||||||| |||||||| | |||| ||||||||||    
T  1632862 gatttccgcaaaataacaaatttaattagttgagacattttcttgat-aatttttgataaaaa 1632801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 207 - 366
Target Start/End: Original strand, 45852892 - 45853049
Alignment:
Q  207 gggaaatgatagatagagtgacaaaatttatgaagaaaatttcaagacaatgtatttgctaactctcctttcctcaattacacaccactacctcccatga 306  Q
    ||||||||||||||| ||||||||| | ||| |||||||||| |||||  ||||||||||||| |  |||| || ||||||| | || || ||||| |||    
T  45852892 gggaaatgatagataaagtgacaaactgtatcaagaaaattttaagaccgtgtatttgctaacac--cttttcttaattacatatcattatctcccttga 45852989  T
Q  307 tttccaacaaataacaaatttaattggttgagaccttttcttgttaaattcttgataaaa 366  Q
    || | | ||||||| ||||||||||||||||||| |||||||| | ||||||||||||||    
T  45852990 ttgcaagcaaataataaatttaattggttgagactttttcttgattaattcttgataaaa 45853049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 207 - 367
Target Start/End: Complemental strand, 2672053 - 2671895
Alignment:
Q  207 gggaaatgatagatagagtgacaaaatttatgaagaaaatttcaagacaatgtatttgctaactctcctttcctcaattacacaccactacctcccatga 306  Q
    |||||||| | |||| ||||||||||| ||| |||||||||| |||||| |||||||| ||||    ||||||| ||||||||| || || ||||  |||    
T  2672053 gggaaatgcttgataaagtgacaaaatgtatcaagaaaattttaagacagtgtatttgttaacat--ctttccttaattacacatcattatctcctctga 2671956  T
Q  307 tttccaacaaataacaaatttaattggttgagaccttttcttgttaaattcttgataaaaa 367  Q
    ||| || | |||||||||||||||||| ||| ||||||||||| | |||||||||||||||    
T  2671955 ttttcagccaataacaaatttaattggctgacaccttttcttgatcaattcttgataaaaa 2671895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 240 - 366
Target Start/End: Complemental strand, 34905963 - 34905839
Alignment:
Q  240 agaaaatttcaagacaatgtatttgctaactctcctttcctcaattacacaccactacctcccatgatttccaacaaataacaaatttaattggttgaga 339  Q
    ||||||||| |||||| ||||||||||||| |  ||||||| ||||| ||| || |||||||  ||||||   ||||||||||||||||| ||| |||||    
T  34905963 agaaaattttaagacagtgtatttgctaacac--ctttccttaattatacatcattacctcctttgatttttgacaaataacaaatttaactggctgaga 34905866  T
Q  340 ccttttcttgttaaattcttgataaaa 366  Q
    | |||||||  | ||||||||||||||    
T  34905865 cattttcttaatcaattcttgataaaa 34905839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 207 - 339
Target Start/End: Complemental strand, 31192209 - 31192079
Alignment:
Q  207 gggaaatgatagatagagtgacaaaatttatgaagaaaatttcaagacaatgtatttgctaactctcctttcctcaattacacaccactacctcccatga 306  Q
    ||||||||||||||| ||||| ||| | ||| |||||||||| ||||||  ||||||||||| | | ||||||| |||||||||| | || ||| | | |    
T  31192209 gggaaatgatagatacagtgataaactgtatcaagaaaattttaagacagggtatttgctaa-tat-ctttccttaattacacactattatctctcttaa 31192112  T
Q  307 tttccaacaaataacaaatttaattggttgaga 339  Q
    ||| ||| |||||||||||||||||| ||||||    
T  31192111 ttttcaataaataacaaatttaattgattgaga 31192079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 315 - 366
Target Start/End: Original strand, 10593524 - 10593575
Alignment:
Q  315 aaataacaaatttaattggttgagaccttttcttgttaaattcttgataaaa 366  Q
    |||||||||||||||||||||||||| |||||| | ||||||||||||||||    
T  10593524 aaataacaaatttaattggttgagacattttctggataaattcttgataaaa 10593575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 207 - 263
Target Start/End: Original strand, 1713936 - 1713992
Alignment:
Q  207 gggaaatgatagatagagtgacaaaatttatgaagaaaatttcaagacaatgtattt 263  Q
    ||||||||||| ||| ||||| ||||||||| | ||||||||||||||| |||||||    
T  1713936 gggaaatgataaatacagtgataaaatttattaggaaaatttcaagacagtgtattt 1713992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 322 - 380
Target Start/End: Original strand, 3169319 - 3169377
Alignment:
Q  322 aaatttaattggttgagaccttttcttgttaaattcttgataaaaactcccgataaata 380  Q
    |||||||||||| | | ||||||||||| | ||||||||||||||||||  ||||||||    
T  3169319 aaatttaattggcttaaaccttttcttgatcaattcttgataaaaactctagataaata 3169377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 70; Significance: 2e-31; HSPs: 12)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 207 - 354
Target Start/End: Original strand, 46413701 - 46413849
Alignment:
Q  207 gggaaatgatagatagagtgacaaaatttatgaagaaaatttcaagacaatgtatttgctaactctcctttcctcaattacacaccactacctcccatga 306  Q
    ||||||||||||||| | ||||||||||||| || |||||||||||||| |||||||| |||  | |||||||| ||||||||| || |||||||| |||    
T  46413701 gggaaatgatagatacattgacaaaatttattaaaaaaatttcaagacagtgtatttgttaa--cacctttccttaattacacatcattacctcccttga 46413798  T
Q  307 ttt---ccaacaaataacaaatttaattggttgagaccttttcttgttaaa 354  Q
    |||   ||| ||||||||||||||||||||||||||| |||||||| ||||    
T  46413799 tttccgccaccaaataacaaatttaattggttgagacattttcttgataaa 46413849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 205 - 370
Target Start/End: Original strand, 23611706 - 23611868
Alignment:
Q  205 atgggaaatgatagatagagtgacaaaatttatgaagaaaatttcaagacaatgtatttgctaactctcctttcctcaattacacaccactacctcccat 304  Q
    ||||||||||||||||| | ||| ||||||||| ||||||||||||| ||| |||||||| |||| |  |||| || |||||||  ||| |||||| | |    
T  23611706 atgggaaatgatagatacaatgataaaatttatcaagaaaatttcaaaacagtgtatttgttaacac--ctttacttaattacat-ccattacctctctt 23611802  T
Q  305 gatttccaacaaataacaaatttaattggttgagaccttttcttgttaaattcttgataaaaactc 370  Q
    |||||||  |||||||||||||||||| |||||||| |||||||| ||||||||| ||||||||||    
T  23611803 gatttccgtcaaataacaaatttaatttgttgagacattttcttgataaattcttaataaaaactc 23611868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 239 - 390
Target Start/End: Original strand, 21882759 - 21882906
Alignment:
Q  239 aagaaaatttcaagacaatgtatttgctaactctcctttcctcaattacacaccactacctcccatgatttccaacaaataacaaatttaattggttgag 338  Q
    ||||||||||||||||| ||||||||||||| ||  |||||| |||||||||||| |||||||| ||||||||  |||||||||||||||||||| ||||    
T  21882759 aagaaaatttcaagacagtgtatttgctaacact--tttccttaattacacaccattacctcccttgatttccggcaaataacaaatttaattggctgag 21882856  T
Q  339 accttttcttgttaaattcttgataaaaactcccgataaataaatagcaatg 390  Q
    | ||||||||  | ||||||| |||||| ||| |  || |||||||||||||    
T  21882857 atcttttcttaatcaattcttcataaaatctctc--tagataaatagcaatg 21882906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 228 - 366
Target Start/End: Complemental strand, 22631609 - 22631473
Alignment:
Q  228 caaaatttatgaagaaaatttcaagacaatgtatttgctaactctcctttcctcaattacacaccactacctcccatgatttccaacaaataacaaattt 327  Q
    |||| ||||| ||||||||||||||||  |||||| |||||| |  ||||||| |||||||||| | || ||||  |||||||| |||||||||||||||    
T  22631609 caaactttatcaagaaaatttcaagacggtgtattagctaacac--ctttccttaattacacactattatctcctttgatttccgacaaataacaaattt 22631512  T
Q  328 aattggttgagaccttttcttgttaaattcttgataaaa 366  Q
    |||||| ||||| ||||||||| | ||||||| ||||||    
T  22631511 aattggctgagatcttttcttgatcaattcttaataaaa 22631473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 206 - 366
Target Start/End: Complemental strand, 20125741 - 20125583
Alignment:
Q  206 tgggaaatgatagatagagtgacaaaatttatgaagaaaatttcaagacaatgtatttgctaactctcctttcctcaattacacaccactacctcccatg 305  Q
    |||||||||||||||| | ||||||| ||||| |||||||||| |||||| ||||||||||||    |||||| | |||||||||||| || || |  |     
T  20125741 tgggaaatgatagatacaatgacaaattttatcaagaaaatttgaagacagtgtatttgctaa--tacctttctttaattacacaccattatcttcttta 20125644  T
Q  306 atttccaacaaataacaaatttaattggttgagaccttttcttgttaaattcttgataaaa 366  Q
    |||||  |||| |||||||||||||||| ||| || |||||||| | ||||||||||||||    
T  20125643 atttctgacaagtaacaaatttaattggctgacacattttcttgatcaattcttgataaaa 20125583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 275 - 370
Target Start/End: Complemental strand, 46297697 - 46297602
Alignment:
Q  275 tttcctcaattacacaccactacctcccatgatttccaacaaataacaaatttaattggttgagaccttttcttgttaaattcttgataaaaactc 370  Q
    |||||| |||||||||||| || ||||| |||||| | |||||||||||||| || ||| |||||| |||||||| ||||||||||||||||||||    
T  46297697 tttccttaattacacaccattaactcccttgattttcgacaaataacaaattaaaatggctgagacattttcttgataaattcttgataaaaactc 46297602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 282 - 366
Target Start/End: Original strand, 24250485 - 24250569
Alignment:
Q  282 aattacacaccactacctcccatgatttccaacaaataacaaatttaattggttgagaccttttcttgttaaattcttgataaaa 366  Q
    ||||||| |||| |||||||| |||||||| |||||||||||||| |||||| | ||| ||||||||| | ||||||||||||||    
T  24250485 aattacaaaccattacctcccttgatttccgacaaataacaaattaaattggataagatcttttcttgatcaattcttgataaaa 24250569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 207 - 390
Target Start/End: Complemental strand, 8123841 - 8123662
Alignment:
Q  207 gggaaatgatagatagagtgacaaaatttatgaagaaaatttcaagacaatgtatttgctaactctcctttcctcaattacacaccactacctcccatga 306  Q
    ||||||||||||||| ||| ||||||| |||  ||||||||| | |||  | ||||||||||| |  ||||| | ||||| |||  | || ||||  | |    
T  8123841 gggaaatgatagatatagtaacaaaatgtatccagaaaattttaggacggtatatttgctaacac--ctttctttaattatacattattatctccattaa 8123744  T
Q  307 tttccaacaaataacaaatttaattggttgagaccttttcttgttaaattcttgataaaaactcccgataaataaatagcaatg 390  Q
    ||||||||||||||||||||||||||  |||||| |||||||| | ||||| |||||||| ||| |  || |||||||||||||    
T  8123743 tttccaacaaataacaaatttaattgactgagacattttcttgatcaattcatgataaaatctctc--tagataaatagcaatg 8123662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 207 - 366
Target Start/End: Complemental strand, 19511560 - 19511403
Alignment:
Q  207 gggaaatgatagatagagtgacaaaatttatgaagaaaatttcaagacaatgtatttgctaactctcctttcctcaattacacaccactacctcccatga 306  Q
    ||||||||||||||  ||||| ||| ||||| || |||||||| ||||| |||||||  |||| |  ||||||| |||||| ||| | || ||||  |||    
T  19511560 gggaaatgatagatgcagtgataaattttatcaaaaaaatttcgagacagtgtatttattaacac--ctttccttaattactcactattatctccattga 19511463  T
Q  307 tttccaacaaataacaaatttaattggttgagaccttttcttgttaaattcttgataaaa 366  Q
    ||||||| |||||| |||||||||||| | | || |||||||  | ||||||||||||||    
T  19511462 tttccaaaaaataataaatttaattggctaaaactttttcttaatcaattcttgataaaa 19511403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 239 - 340
Target Start/End: Complemental strand, 1985124 - 1985025
Alignment:
Q  239 aagaaaatttcaagacaatgtatttgctaactctcctttcctcaattacacaccactacctcccatgatttccaacaaataacaaatttaattggttgag 338  Q
    |||||||||| |||| | ||||||||||||| |   |||||| ||||||| |||| ||||| || ||||||||  |||||||||||||||||||| ||||    
T  1985124 aagaaaattttaagatagtgtatttgctaacaca--tttccttaattacataccattaccttccttgatttccggcaaataacaaatttaattggctgag 1985027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 314 - 370
Target Start/End: Complemental strand, 44601053 - 44600997
Alignment:
Q  314 caaataacaaatttaattggttgagaccttttcttgttaaattcttgataaaaactc 370  Q
    ||||||||||||||||||| |||| || ||||||| | |||||||||||||||||||    
T  44601053 caaataacaaatttaattgattgaaacattttcttatcaaattcttgataaaaactc 44600997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 288 - 366
Target Start/End: Original strand, 23730540 - 23730618
Alignment:
Q  288 acaccactacctcccatgatttccaacaaataacaaatttaattggttgagaccttttcttgttaaattcttgataaaa 366  Q
    |||||| |||||| | |||||||| ||||||||| ||||||||| | ||| || |||||||| | ||||||||||||||    
T  23730540 acaccattacctctcttgatttccgacaaataacgaatttaatttgctgaaacgttttcttgatcaattcttgataaaa 23730618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 66; Significance: 5e-29; HSPs: 17)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 210 - 395
Target Start/End: Original strand, 42504155 - 42504333
Alignment:
Q  210 aaatgatagatagagtgacaaaatttatgaagaaaatttcaagacaatgtatttgctaactctcctttcctcaattacacaccactacctcccatgattt 309  Q
    |||||||||||| | ||||||||| ||| |||||||||| |||||| |||||||| |||| |  ||||||| ||||||||| || |||||||| ||||||    
T  42504155 aaatgatagatacaatgacaaaatgtatcaagaaaattttaagacagtgtatttgttaacac--ctttccttaattacacatcattacctcccttgattt 42504252  T
Q  310 ccaacaaataacaaatttaattggttgagaccttttcttgttaaattcttgataaaaactcccgataaataaatagcaatgatcat 395  Q
    ||  |||||||||||||||||||||||| | ||||||||| | |||||   |||||||||| |  || ||||||||||||| ||||    
T  42504253 ccggcaaataacaaatttaattggttgaaatcttttcttgatcaattc---ataaaaactctc--tagataaatagcaatgttcat 42504333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 208 - 370
Target Start/End: Complemental strand, 37762956 - 37762794
Alignment:
Q  208 ggaaatgatagatagagtgacaaaatttatgaagaaaatttcaagacaatgtatttgctaactctcctttcctcaattacacaccactacctcccatgat 307  Q
    |||||||||||||||||||||||||||||| || ||||||||||||||||||||||| |||| ||  |||||| ||||||||| || ||  |||  |||     
T  37762956 ggaaatgatagatagagtgacaaaatttatcaaaaaaatttcaagacaatgtatttgttaacact--tttccttaattacacatcattatttcctttgac 37762859  T
Q  308 ttccaacaaataacaaatttaattggt--tgagaccttttcttgttaaattcttgataaaaactc 370  Q
    || |  |||||||||||||||||||||  || | | |||||||| |||||||||||| |||||||    
T  37762858 tttcgtcaaataacaaatttaattggttgtgtggcattttcttgataaattcttgatgaaaactc 37762794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 206 - 366
Target Start/End: Complemental strand, 5288673 - 5288515
Alignment:
Q  206 tgggaaatgatagatagagtgacaaaatttatgaagaaaatttcaagacaatgtatttgctaactctcctttcctcaattacacaccactacctcccatg 305  Q
    |||||||||||||||||||||||||| | ||| |||||| |||||||||  | ||||||||||| |   |||  | |||||||||||| || ||||| ||    
T  5288673 tgggaaatgatagatagagtgacaaactgtatcaagaaagtttcaagacggtatatttgctaacacattttt--ttaattacacaccattatctcccttg 5288576  T
Q  306 atttccaacaaataacaaatttaattggttgagaccttttcttgttaaattcttgataaaa 366  Q
    |||| |  |||||||||||||||||||| |||||| |||||||  | ||||||| ||||||    
T  5288575 atttacggcaaataacaaatttaattggctgagacattttcttaatcaattcttaataaaa 5288515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 200 - 367
Target Start/End: Complemental strand, 24060731 - 24060568
Alignment:
Q  200 ttataatgggaaatgatagatagagtgacaaaatttatgaagaaaatttcaagacaatgtatttgctaactctcctttcctcaattacacaccactacct 299  Q
    ||||||||||||||| | | || ||||||||  | ||| |||||||||| || ||| ||||||||||||| |   |||||| |||||||||||| || ||    
T  24060731 ttataatgggaaatgcttggtacagtgacaa--tgtattaagaaaattttaaaacagtgtatttgctaacaca--tttccttaattacacaccattatct 24060636  T
Q  300 cccatgatttccaacaaataacaaatttaattggttgagaccttttcttgttaaattcttgataaaaa 367  Q
    ||| ||||||| ||| |||||||||||||||| | | |||| |||||||| | |||||||||||||||    
T  24060635 cccttgatttctaaccaataacaaatttaattagcttagacattttcttgatcaattcttgataaaaa 24060568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 282 - 366
Target Start/End: Complemental strand, 25817742 - 25817658
Alignment:
Q  282 aattacacaccactacctcccatgatttccaacaaataacaaatttaattggttgagaccttttcttgttaaattcttgataaaa 366  Q
    |||||||||||| |||||| | ||||||||  |||||||||||||||||||| ||||||||||||||| | ||||||||||||||    
T  25817742 aattacacaccattacctcacttgatttccgtcaaataacaaatttaattggctgagaccttttcttgatcaattcttgataaaa 25817658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 273 - 359
Target Start/End: Complemental strand, 19482604 - 19482518
Alignment:
Q  273 cctttcctcaattacacaccactacctcccatgatttccaacaaataacaaatttaattggttgagaccttttcttgttaaattctt 359  Q
    |||||||| |||||||||||| ||| |||| ||||||||  |||||||||||||||||||||||| |  |||||||| |||||||||    
T  19482604 cctttccttaattacacaccattacttcccttgatttccgccaaataacaaatttaattggttgaaaaattttcttgataaattctt 19482518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 224 - 349
Target Start/End: Complemental strand, 30220832 - 30220711
Alignment:
Q  224 gtgacaaaatttatgaagaaaatttcaagacaatgtatttgctaactctcctttcctcaattacacaccactacctcccatgatttccaacaaataacaa 323  Q
    |||||||||| ||| |||||||||| |||||| ||||||||||||| ||  |||||| |||||||||||| || ||||| ||||||||  | ||||||||    
T  30220832 gtgacaaaatgtatcaagaaaattttaagacagtgtatttgctaacact--tttccttaattacacaccaata-ctcccttgatttccggccaataacaa 30220736  T
Q  324 atttaattggttgagaccttttcttg 349  Q
    | |||||||| ||| |||||||||||    
T  30220735 aattaattgg-tgaaaccttttcttg 30220711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 273 - 354
Target Start/End: Original strand, 29065300 - 29065381
Alignment:
Q  273 cctttcctcaattacacaccactacctcccatgatttccaacaaataacaaatttaattggttgagaccttttcttgttaaa 354  Q
    |||||| | |||||||||||| |||||||  ||||||||  ||||||||||||||||||| ||||||| |||||||| ||||    
T  29065300 cctttctttaattacacaccattacctccattgatttccgtcaaataacaaatttaattgattgagactttttcttgataaa 29065381  T

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Target: chr4; HSP #9
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 314 - 362
Target Start/End: Complemental strand, 41545460 - 41545412
Alignment:
Q  314 caaataacaaatttaattggttgagaccttttcttgttaaattcttgat 362  Q
    ||||||||||||||||||||||||| |||||||||| ||||||||||||    
T  41545460 caaataacaaatttaattggttgaggccttttcttgataaattcttgat 41545412  T

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Target: chr4; HSP #10
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 207 - 264
Target Start/End: Complemental strand, 19663432 - 19663375
Alignment:
Q  207 gggaaatgatagatagagtgacaaaatttatgaagaaaatttcaagacaatgtatttg 264  Q
    ||||||||||||||| ||||||||||||||| |||||||||| |||| | ||||||||    
T  19663432 gggaaatgatagatacagtgacaaaatttatcaagaaaattttaagagagtgtatttg 19663375  T

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Target: chr4; HSP #11
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 210 - 269
Target Start/End: Original strand, 19663274 - 19663333
Alignment:
Q  210 aaatgatagatagagtgacaaaatttatgaagaaaatttcaagacaatgtatttgctaac 269  Q
    |||||||||||| ||||||||||||||| || ||||| |||||||| |||||||| ||||    
T  19663274 aaatgatagatacagtgacaaaatttataaaaaaaatgtcaagacagtgtatttgttaac 19663333  T

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Target: chr4; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 215 - 269
Target Start/End: Complemental strand, 19482855 - 19482801
Alignment:
Q  215 atagatagagtgacaaaatttatgaagaaaatttcaagacaatgtatttgctaac 269  Q
    ||||||| ||||||||||||||| ||||||||||||||||| | |||||| ||||    
T  19482855 atagatacagtgacaaaatttatcaagaaaatttcaagacagtttatttgttaac 19482801  T

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Target: chr4; HSP #13
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 273 - 370
Target Start/End: Original strand, 2765390 - 2765487
Alignment:
Q  273 cctttcctcaattacacaccactacctcccatgatttccaacaaataacaaatttaattggttgagaccttttcttgttaaattcttgataaaaactc 370  Q
    |||||| | ||||||||| || || ||||||||||||    | |||||||||||||||||| | ||||||||||||| | || |||| ||||||||||    
T  2765390 cctttcattaattacacatcattatctcccatgatttttggccaataacaaatttaattggcttagaccttttcttgatcaactcttaataaaaactc 2765487  T

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Target: chr4; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 205 - 343
Target Start/End: Complemental strand, 16528718 - 16528579
Alignment:
Q  205 atgggaaatgatagatagagtgacaaaatttatgaagaaaatttcaagacaatgtatttgctaactctcctttcctcaattacacaccactacc---tcc 301  Q
    ||||||||||||||||| || ||||| || ||| |||||||||| |||| | |||||||| |||| |   |||| | |||||||||||| ||     ||     
T  16528718 atgggaaatgatagatacagcgacaacatgtatcaagaaaattttaagatagtgtatttgttaacaca--tttctttaattacacaccattaatatatca 16528621  T
Q  302 catgatttccaacaaataacaaatttaattggttgagacctt 343  Q
      |||||||| ||||||||||||||||||||| |||||||||    
T  16528620 tttgatttccgacaaataacaaatttaattggctgagacctt 16528579  T

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Target: chr4; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 313 - 390
Target Start/End: Complemental strand, 13218501 - 13218427
Alignment:
Q  313 acaaataacaaatttaattggttgagaccttttcttgttaaattcttgataaaaactcccgataaataaatagcaatg 390  Q
    ||||||||||||||||||||   |||||||||||||  |||||| || |||||||||| |   |||||||||||||||    
T  13218501 acaaataacaaatttaattgaccgagaccttttcttaataaatttttaataaaaactctc---aaataaatagcaatg 13218427  T

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Target: chr4; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 316 - 367
Target Start/End: Original strand, 42108751 - 42108802
Alignment:
Q  316 aataacaaatttaattggttgagaccttttcttgttaaattcttgataaaaa 367  Q
    |||||||||||||||||| ||| || |||||||| | |||||||||||||||    
T  42108751 aataacaaatttaattggctgaaactttttcttgatcaattcttgataaaaa 42108802  T

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Target: chr4; HSP #17
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 322 - 370
Target Start/End: Complemental strand, 41485774 - 41485726
Alignment:
Q  322 aaatttaattggttgagaccttttcttgttaaattcttgataaaaactc 370  Q
    |||||||||||| | | ||||||||||| | ||||||||||||||||||    
T  41485774 aaatttaattggcttaaaccttttcttgatcaattcttgataaaaactc 41485726  T

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Target: scaffold0194 (Bit Score: 53; Significance: 3e-21; HSPs: 1)
Name: scaffold0194
Description:

Target: scaffold0194; HSP #1
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 207 - 322
Target Start/End: Original strand, 27067 - 27180
Alignment:
Q  207 gggaaatgatagatagagtgacaaaatttatgaagaaaatttcaagacaatgtatttgctaactctcctttcctcaattacacaccactacctcccatga 306  Q
    ||||||||||||||| ||||||||||||||| ||||||||||||||||| |||||||| |||  | |||||||| |||||||| | | || ||||| |||    
T  27067 gggaaatgatagatacagtgacaaaatttatcaagaaaatttcaagacagtgtatttgttaa--cacctttccttaattacactctattatctcccttga 27164  T
Q  307 tttccaacaaataaca 322  Q
    |||||  |||||||||    
T  27165 tttccgccaaataaca 27180  T

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Target: scaffold0018 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 273 - 370
Target Start/End: Original strand, 69947 - 70044
Alignment:
Q  273 cctttcctcaattacacaccactacctcccatgatttccaacaaataacaaatttaattggttgagaccttttcttgttaaattcttgataaaaactc 370  Q
    |||||||| |||||||| ||| || ||||| ||||||||  | |||||||||||||||||| ||| ||||||||||| | |||| | |||||||||||    
T  69947 cctttccttaattacaccccattatctcccttgatttccggccaataacaaatttaattggctgaaaccttttcttgatcaattttagataaaaactc 70044  T

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Target: scaffold0122 (Bit Score: 34; Significance: 0.0000000006; HSPs: 1)
Name: scaffold0122
Description:

Target: scaffold0122; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 242 - 366
Target Start/End: Complemental strand, 18749 - 18627
Alignment:
Q  242 aaaatttcaagacaatgtatttgctaactctcctttcctcaattacacaccactacctcccatgatttccaacaaataacaaatttaattggttgagacc 341  Q
    |||| ||||| ||| ||||||||||||| |   |||||| |||||| ||||| || ||||| | |||| | ||||||||||||||||||||  | ||||     
T  18749 aaaaattcaaaacagtgtatttgctaacaca--tttccttaattactcaccattatctcccttaattttcgacaaataacaaatttaattgactaagact 18652  T
Q  342 ttttcttgttaaattcttgataaaa 366  Q
    |||||||| | ||||||| ||||||    
T  18651 ttttcttgatcaattcttaataaaa 18627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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