View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15976_high_21 (Length: 335)
Name: NF15976_high_21
Description: NF15976
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15976_high_21 |
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Alignment Details
Target: chr7 (Bit Score: 256; Significance: 1e-142; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 256; E-Value: 1e-142
Query Start/End: Original strand, 22 - 301
Target Start/End: Original strand, 39962353 - 39962632
Alignment:
| Q |
22 |
gatgccaggagcactccatctaggagcttgaatgagcttacaagttaccttaaaggtcgttttagtgggaaacatggattaggaaaaaccagtaccttcg |
121 |
Q |
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| T |
39962353 |
gatgccaggatcactccatctaggagcttgaatgagcttacaagttaccttaaaggtcgttttagtgggaaacatggattaggaaaaaccagtaccttcg |
39962452 |
T |
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| Q |
122 |
taccaaatcaggtaattattgttgttttttgtgctccttgtatcttcattttgtatcgaaaaatacttatttgatcataaattcaaataaaattatgtaa |
221 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||| ||| |
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| T |
39962453 |
taccaaatcaggtaattattgttgttttttgtgctccttgtatcttcattttgtatcgaaaaatacttatttgatcacaaatacaaataaaattatttaa |
39962552 |
T |
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| Q |
222 |
gtgcacacacctaaataaataaatgatgtgaaaaattatttttcatcaatttttcttcatttgtataggtgtgccacaca |
301 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||| |
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| T |
39962553 |
gtgcacacacctaaataaataaatgatgtgaaaaattatttttcatcaatttttcttcatttatataggtgtgtcacaca |
39962632 |
T |
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