View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15976_high_27 (Length: 286)
Name: NF15976_high_27
Description: NF15976
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15976_high_27 |
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Alignment Details
Target: chr7 (Bit Score: 213; Significance: 1e-117; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 213; E-Value: 1e-117
Query Start/End: Original strand, 15 - 235
Target Start/End: Complemental strand, 4065281 - 4065061
Alignment:
| Q |
15 |
ggaatagtaataatctagtggaggtttttgtgcaaggtgttggtggtgaaagtttgataagaactagttctttaactactcgtgttggtggacttggttt |
114 |
Q |
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| T |
4065281 |
ggaatagtaataatctagtggaggtttttgtgcaaggtgttggtggtgaaagtttgataagaactagttctttaactactcgtgttggtggacttggttt |
4065182 |
T |
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| Q |
115 |
gaatggtgaaaaggaattggatcaagttgttcctccttcaccacaaggtggtggtggttcaattggttcttcttctggtacttcagaatctgagggtcaa |
214 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |
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| T |
4065181 |
gaatggtgaaaaggaattggatcaagttgttcctccttcaccacaaggtggtggtggttcaattggttcttcttcgggtacttcagaatctgagggtcaa |
4065082 |
T |
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| Q |
215 |
caacctggtcaaggtaaatga |
235 |
Q |
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|||| |||||||||||||||| |
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| T |
4065081 |
caacatggtcaaggtaaatga |
4065061 |
T |
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