View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF15976_high_5 (Length: 539)

Name: NF15976_high_5
Description: NF15976
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF15976_high_5
NF15976_high_5
[»] chr7 (57 HSPs)
chr7 (1-254)||(22232395-22232648)
chr7 (1-254)||(22254091-22254344)
chr7 (1-231)||(22257355-22257585)
chr7 (1-254)||(11825124-11825376)
chr7 (1-254)||(5826477-5826729)
chr7 (44-245)||(8397972-8398171)
chr7 (116-245)||(26153376-26153505)
chr7 (99-245)||(8258093-8258239)
chr7 (120-244)||(5796760-5796885)
chr7 (1-124)||(20100741-20100864)
chr7 (138-254)||(26557736-26557854)
chr7 (138-254)||(35961337-35961455)
chr7 (137-245)||(11397828-11397939)
chr7 (138-246)||(10345413-10345523)
chr7 (1-124)||(2349556-2349680)
chr7 (148-245)||(48645714-48645813)
chr7 (148-247)||(17731067-17731168)
chr7 (1-121)||(42606378-42606498)
chr7 (138-245)||(4595777-4595886)
chr7 (138-245)||(4695718-4695827)
chr7 (116-254)||(6603662-6603800)
chr7 (138-245)||(5241937-5242048)
chr7 (138-223)||(9864535-9864620)
chr7 (151-254)||(13907569-13907673)
chr7 (174-254)||(23776170-23776251)
chr7 (172-245)||(44363605-44363678)
chr7 (138-254)||(22611495-22611610)
chr7 (202-254)||(23467014-23467066)
chr7 (169-225)||(23467066-23467122)
chr7 (1-130)||(747932-748062)
chr7 (138-245)||(4543034-4543140)
chr7 (138-254)||(11919623-11919741)
chr7 (139-254)||(13449551-13449665)
chr7 (5-108)||(8257500-8257604)
chr7 (113-254)||(16165950-16166090)
chr7 (174-255)||(18559978-18560061)
chr7 (137-254)||(23224675-23224791)
chr7 (137-241)||(37415206-37415309)
chr7 (116-240)||(44017561-44017684)
chr7 (137-245)||(45286848-45286955)
chr7 (10-106)||(2251977-2252073)
chr7 (138-245)||(4547106-4547212)
chr7 (10-106)||(23598679-23598775)
chr7 (10-106)||(26182408-26182504)
chr7 (158-245)||(24918438-24918525)
chr7 (206-245)||(13809284-13809323)
chr7 (138-246)||(8277224-8277331)
chr7 (174-254)||(18560817-18560899)
chr7 (137-245)||(45290259-45290366)
chr7 (136-197)||(2441098-2441159)
chr7 (209-253)||(13842939-13842983)
chr7 (10-109)||(709931-710029)
chr7 (180-245)||(5747422-5747486)
chr7 (203-245)||(44363675-44363717)
chr7 (210-245)||(7227835-7227870)
chr7 (42-80)||(26460602-26460639)
chr7 (188-240)||(3540937-3540988)
[»] scaffold0064 (2 HSPs)
scaffold0064 (255-521)||(4487-4753)
scaffold0064 (279-500)||(21719-21940)
[»] chr8 (41 HSPs)
chr8 (1-254)||(14188269-14188521)
chr8 (9-256)||(18695742-18695988)
chr8 (1-254)||(20262653-20262905)
chr8 (1-254)||(21049283-21049535)
chr8 (1-245)||(5964354-5964597)
chr8 (116-245)||(31986499-31986628)
chr8 (116-254)||(30645697-30645835)
chr8 (116-245)||(31981572-31981701)
chr8 (129-245)||(4868479-4868596)
chr8 (138-259)||(14421980-14422103)
chr8 (138-254)||(23644058-23644174)
chr8 (5-124)||(22654364-22654483)
chr8 (137-254)||(14589387-14589504)
chr8 (116-254)||(45155031-45155173)
chr8 (138-229)||(5980083-5980174)
chr8 (137-245)||(36710408-36710520)
chr8 (148-257)||(5538532-5538642)
chr8 (137-245)||(33883122-33883232)
chr8 (148-245)||(12583268-12583367)
chr8 (117-254)||(18825655-18825792)
chr8 (148-244)||(25231330-25231429)
chr8 (139-254)||(10664190-10664303)
chr8 (5-124)||(27863448-27863571)
chr8 (116-254)||(16953991-16954128)
chr8 (137-259)||(18824157-18824278)
chr8 (138-245)||(37681291-37681403)
chr8 (138-254)||(22173700-22173814)
chr8 (138-254)||(23597445-23597560)
chr8 (10-83)||(453694-453767)
chr8 (138-245)||(18721062-18721168)
chr8 (138-242)||(5584211-5584314)
chr8 (163-224)||(41836233-41836295)
chr8 (138-245)||(20887782-20887889)
chr8 (35-109)||(24903398-24903472)
chr8 (116-254)||(25591245-25591383)
chr8 (138-245)||(43681658-43681756)
chr8 (10-106)||(24435138-24435234)
chr8 (10-106)||(24445184-24445280)
chr8 (43-106)||(17012948-17013012)
chr8 (43-106)||(17544189-17544253)
chr8 (188-254)||(39659712-39659776)
[»] chr6 (46 HSPs)
chr6 (1-245)||(14966328-14966571)
chr6 (6-245)||(14969813-14970051)
chr6 (6-247)||(3826595-3826834)
chr6 (1-245)||(13095497-13095740)
chr6 (116-254)||(34502564-34502702)
chr6 (116-245)||(5617984-5618113)
chr6 (116-245)||(5260028-5260161)
chr6 (112-226)||(9839193-9839306)
chr6 (116-256)||(9954182-9954321)
chr6 (148-255)||(10290236-10290345)
chr6 (116-254)||(1125502-1125640)
chr6 (138-246)||(24371458-24371567)
chr6 (138-229)||(23842580-23842671)
chr6 (138-245)||(14281289-14281400)
chr6 (138-245)||(28107524-28107635)
chr6 (138-245)||(28111576-28111687)
chr6 (116-254)||(13005411-13005553)
chr6 (138-245)||(23008300-23008409)
chr6 (138-245)||(23779955-23780064)
chr6 (1-116)||(17231953-17232068)
chr6 (138-245)||(17106392-17106501)
chr6 (174-255)||(20186020-20186103)
chr6 (174-255)||(22149888-22149971)
chr6 (138-229)||(23848023-23848114)
chr6 (138-245)||(6514237-6514347)
chr6 (137-245)||(23381946-23382053)
chr6 (138-254)||(30655699-30655814)
chr6 (116-247)||(5737836-5737966)
chr6 (10-83)||(11410870-11410943)
chr6 (116-243)||(2372551-2372686)
chr6 (137-245)||(23384526-23384633)
chr6 (112-205)||(2846520-2846613)
chr6 (137-245)||(11402500-11402608)
chr6 (174-256)||(11192346-11192429)
chr6 (138-254)||(11187963-11188080)
chr6 (129-245)||(28849070-28849187)
chr6 (116-246)||(2379450-2379579)
chr6 (35-106)||(22920659-22920731)
chr6 (137-246)||(26942208-26942316)
chr6 (137-245)||(3596555-3596662)
chr6 (174-226)||(22560952-22561004)
chr6 (188-240)||(27649282-27649333)
chr6 (165-254)||(28974136-28974227)
chr6 (210-254)||(11248085-11248129)
chr6 (174-244)||(13021027-13021099)
chr6 (188-240)||(19664679-19664730)
[»] scaffold0062 (2 HSPs)
scaffold0062 (6-256)||(67598-67847)
scaffold0062 (9-256)||(52649-52895)
[»] chr4 (62 HSPs)
chr4 (1-255)||(17670410-17670663)
chr4 (1-245)||(18859876-18860119)
chr4 (113-246)||(11702352-11702485)
chr4 (116-245)||(10386156-10386285)
chr4 (117-248)||(10248039-10248170)
chr4 (137-245)||(33927211-33927320)
chr4 (138-254)||(12786362-12786480)
chr4 (116-244)||(15811909-15812041)
chr4 (137-254)||(56199092-56199211)
chr4 (138-254)||(35510231-35510349)
chr4 (148-254)||(52006285-52006393)
chr4 (138-245)||(3720600-3720709)
chr4 (138-245)||(19820954-19821063)
chr4 (137-254)||(56195765-56195884)
chr4 (137-245)||(15404854-15404965)
chr4 (116-245)||(19859274-19859407)
chr4 (138-245)||(3797587-3797697)
chr4 (138-245)||(19827661-19827770)
chr4 (154-245)||(37102981-37103074)
chr4 (154-253)||(15445120-15445221)
chr4 (137-254)||(34319684-34319800)
chr4 (138-245)||(40795252-40795361)
chr4 (116-246)||(19864166-19864300)
chr4 (116-254)||(5673113-5673250)
chr4 (154-245)||(26060758-26060852)
chr4 (138-253)||(5681670-5681783)
chr4 (137-254)||(29325062-29325178)
chr4 (137-254)||(52530700-52530816)
chr4 (138-254)||(15429610-15429728)
chr4 (138-254)||(15436224-15436342)
chr4 (162-254)||(18911770-18911861)
chr4 (137-245)||(44808731-44808838)
chr4 (116-254)||(34017550-34017687)
chr4 (116-245)||(53094727-53094862)
chr4 (138-254)||(40902840-40902955)
chr4 (154-254)||(44165048-44165147)
chr4 (116-254)||(15432299-15432436)
chr4 (137-197)||(24150913-24150973)
chr4 (116-254)||(27014480-27014617)
chr4 (137-255)||(40616572-40616689)
chr4 (151-244)||(5677192-5677285)
chr4 (138-254)||(12238499-12238614)
chr4 (138-245)||(24043902-24044011)
chr4 (10-106)||(3719412-3719508)
chr4 (116-197)||(5670795-5670876)
chr4 (137-197)||(5706633-5706693)
chr4 (10-109)||(14702012-14702111)
chr4 (174-255)||(37739525-37739607)
chr4 (163-224)||(11649244-11649306)
chr4 (148-245)||(48637757-48637853)
chr4 (174-244)||(48013163-48013235)
chr4 (166-240)||(15851450-15851524)
chr4 (138-197)||(38283302-38283361)
chr4 (174-224)||(1388144-1388194)
chr4 (138-254)||(48415278-48415397)
chr4 (138-224)||(33408124-33408203)
chr4 (42-80)||(3734450-3734487)
chr4 (185-245)||(24605007-24605073)
chr4 (42-80)||(49636468-49636505)
chr4 (42-80)||(49639761-49639798)
chr4 (209-254)||(5820813-5820857)
chr4 (188-240)||(26062703-26062754)
[»] chr2 (56 HSPs)
chr2 (6-256)||(15719041-15719290)
chr2 (9-256)||(15703737-15703983)
chr2 (1-254)||(11059897-11060148)
chr2 (1-245)||(13518401-13518643)
chr2 (113-246)||(1503198-1503331)
chr2 (113-246)||(1506402-1506535)
chr2 (1-172)||(11056439-11056608)
chr2 (1-123)||(18012040-18012162)
chr2 (116-254)||(36808208-36808348)
chr2 (118-244)||(3252534-3252658)
chr2 (148-254)||(25820608-25820716)
chr2 (138-246)||(43723932-43724042)
chr2 (137-254)||(45457383-45457502)
chr2 (138-254)||(25138692-25138810)
chr2 (138-245)||(15470690-15470799)
chr2 (116-245)||(45454073-45454206)
chr2 (137-245)||(31427314-31427425)
chr2 (138-254)||(26366146-26366264)
chr2 (138-245)||(13971675-13971784)
chr2 (148-245)||(6827013-6827112)
chr2 (154-255)||(13137136-13137238)
chr2 (137-254)||(8888857-8888973)
chr2 (137-254)||(33310887-33311003)
chr2 (116-252)||(25874381-25874516)
chr2 (116-245)||(34682897-34683027)
chr2 (116-243)||(29440695-29440821)
chr2 (116-254)||(25870984-25871121)
chr2 (116-254)||(25959457-25959594)
chr2 (116-245)||(45499135-45499263)
chr2 (138-245)||(5666750-5666858)
chr2 (116-254)||(30274536-30274674)
chr2 (117-254)||(37279445-37279580)
chr2 (116-197)||(9185248-9185329)
chr2 (138-245)||(24238594-24238700)
chr2 (10-83)||(29435856-29435929)
chr2 (163-245)||(38460590-38460674)
chr2 (137-197)||(38015739-38015799)
chr2 (137-254)||(11347662-11347778)
chr2 (10-106)||(22592620-22592715)
chr2 (138-254)||(40781704-40781822)
chr2 (116-245)||(9188429-9188557)
chr2 (116-245)||(24235300-24235428)
chr2 (116-240)||(40677541-40677664)
chr2 (138-256)||(42368464-42368582)
chr2 (206-258)||(30926844-30926895)
chr2 (138-254)||(31585696-31585813)
chr2 (193-255)||(13137257-13137320)
chr2 (133-244)||(35521138-35521249)
chr2 (165-254)||(24384925-24385015)
chr2 (188-255)||(36327107-36327172)
chr2 (154-254)||(10601091-10601190)
chr2 (180-244)||(40937309-40937372)
chr2 (188-240)||(23673358-23673409)
chr2 (166-229)||(29436025-29436088)
chr2 (209-254)||(43207651-43207698)
chr2 (42-80)||(18939031-18939068)
[»] chr5 (44 HSPs)
chr5 (6-254)||(3195196-3195442)
chr5 (1-254)||(34652525-34652776)
chr5 (10-254)||(26548200-26548441)
chr5 (10-254)||(26551759-26552000)
chr5 (20-254)||(28562130-28562362)
chr5 (20-254)||(28565698-28565930)
chr5 (45-254)||(30764379-30764586)
chr5 (45-254)||(30761560-30761767)
chr5 (116-252)||(19686393-19686529)
chr5 (116-254)||(19689776-19689914)
chr5 (111-245)||(2453500-2453634)
chr5 (137-245)||(7625342-7625453)
chr5 (138-245)||(7271268-7271377)
chr5 (148-245)||(4099299-4099398)
chr5 (20-163)||(40799777-40799919)
chr5 (154-245)||(21332448-21332541)
chr5 (138-245)||(28787093-28787202)
chr5 (138-245)||(30066561-30066670)
chr5 (1-124)||(4731729-4731852)
chr5 (138-255)||(22936706-22936822)
chr5 (112-239)||(10629427-10629555)
chr5 (154-245)||(21335467-21335560)
chr5 (138-224)||(33552371-33552457)
chr5 (138-254)||(32838119-32838235)
chr5 (137-254)||(14015906-14016022)
chr5 (137-245)||(26752477-26752584)
chr5 (138-254)||(41876521-41876636)
chr5 (138-254)||(34832014-34832131)
chr5 (137-254)||(41306293-41306409)
chr5 (10-106)||(26727052-26727148)
chr5 (137-254)||(31863955-31864072)
chr5 (112-245)||(18239276-18239415)
chr5 (136-254)||(31575655-31575773)
chr5 (138-223)||(39192580-39192665)
chr5 (197-245)||(40799728-40799776)
chr5 (138-247)||(40915931-40916039)
chr5 (175-244)||(18765507-18765577)
chr5 (154-254)||(42063186-42063287)
chr5 (138-254)||(43491997-43492112)
chr5 (158-254)||(21915383-21915480)
chr5 (174-254)||(37215317-37215396)
chr5 (166-254)||(21680634-21680721)
chr5 (188-240)||(14616442-14616493)
chr5 (188-240)||(33921395-33921446)
[»] scaffold0360 (2 HSPs)
scaffold0360 (1-245)||(6383-6626)
scaffold0360 (1-245)||(2551-2794)
[»] chr3 (80 HSPs)
chr3 (10-245)||(2279394-2279627)
chr3 (10-254)||(2784228-2784469)
chr3 (1-254)||(10963505-10963761)
chr3 (1-245)||(25888246-25888489)
chr3 (1-254)||(10959998-10960254)
chr3 (1-235)||(10967014-10967251)
chr3 (1-240)||(30157810-30158048)
chr3 (116-254)||(18883437-18883575)
chr3 (113-245)||(42354177-42354309)
chr3 (1-254)||(44508838-44509094)
chr3 (116-245)||(4250611-4250739)
chr3 (116-245)||(54735978-54736106)
chr3 (116-254)||(3306075-3306213)
chr3 (154-259)||(10885206-10885313)
chr3 (138-255)||(20728385-20728504)
chr3 (154-254)||(52200257-52200359)
chr3 (148-254)||(10902285-10902393)
chr3 (138-229)||(31549519-31549610)
chr3 (148-254)||(10881825-10881933)
chr3 (20-108)||(6173266-6173354)
chr3 (138-245)||(28007829-28007938)
chr3 (138-254)||(35412831-35412946)
chr3 (138-245)||(52309382-52309491)
chr3 (116-254)||(2873868-2874005)
chr3 (137-257)||(7486896-7487016)
chr3 (137-240)||(47051820-47051926)
chr3 (153-249)||(55034677-55034775)
chr3 (138-254)||(539152-539267)
chr3 (138-245)||(16244208-16244317)
chr3 (138-245)||(32287075-32287186)
chr3 (137-224)||(47055250-47055338)
chr3 (116-250)||(54724045-54724178)
chr3 (138-245)||(19304453-19304562)
chr3 (174-254)||(22993450-22993532)
chr3 (137-254)||(23298366-23298483)
chr3 (148-254)||(41977346-41977453)
chr3 (116-254)||(12541053-12541190)
chr3 (137-255)||(50461302-50461419)
chr3 (116-254)||(281948-282087)
chr3 (137-254)||(6434527-6434646)
chr3 (138-254)||(30691061-30691177)
chr3 (137-245)||(24125824-24125931)
chr3 (138-245)||(6922846-6922952)
chr3 (148-245)||(54461346-54461445)
chr3 (148-245)||(16184445-16184541)
chr3 (137-245)||(24129101-24129208)
chr3 (141-244)||(18542881-18542986)
chr3 (137-197)||(18641580-18641640)
chr3 (137-197)||(18644576-18644636)
chr3 (148-224)||(43809920-43809996)
chr3 (138-254)||(2775820-2775935)
chr3 (138-254)||(2779062-2779177)
chr3 (138-254)||(11190852-11190967)
chr3 (138-245)||(19301027-19301136)
chr3 (138-245)||(25585012-25585120)
chr3 (116-240)||(28327670-28327793)
chr3 (116-240)||(28330995-28331118)
chr3 (10-106)||(23374644-23374740)
chr3 (138-245)||(43927175-43927281)
chr3 (174-223)||(55031856-55031905)
chr3 (154-217)||(31857916-31857979)
chr3 (138-245)||(45896716-45896826)
chr3 (137-245)||(53816154-53816261)
chr3 (35-103)||(16314507-16314576)
chr3 (35-103)||(16414673-16414742)
chr3 (35-103)||(18495501-18495570)
chr3 (10-106)||(29233503-29233599)
chr3 (35-106)||(18515644-18515716)
chr3 (137-197)||(28266243-28266303)
chr3 (5-72)||(4225801-4225868)
chr3 (138-254)||(49742661-49742778)
chr3 (174-245)||(10106362-10106432)
chr3 (169-256)||(27298321-27298408)
chr3 (42-80)||(5886927-5886964)
chr3 (42-80)||(5896911-5896948)
chr3 (166-254)||(19869255-19869343)
chr3 (174-245)||(30219759-30219832)
chr3 (180-239)||(3292721-3292782)
chr3 (226-254)||(3840941-3840969)
chr3 (165-240)||(13979642-13979717)
[»] scaffold0014 (2 HSPs)
scaffold0014 (116-245)||(228857-228986)
scaffold0014 (116-245)||(223931-224060)
[»] scaffold0214 (3 HSPs)
scaffold0214 (116-254)||(13829-13967)
scaffold0214 (116-254)||(27845-27983)
scaffold0214 (116-254)||(20279-20417)
[»] scaffold0737 (1 HSPs)
scaffold0737 (139-254)||(7108-7224)
[»] scaffold0034 (1 HSPs)
scaffold0034 (116-254)||(48173-48311)
[»] scaffold0045 (1 HSPs)
scaffold0045 (116-245)||(89987-90119)
[»] scaffold0996 (1 HSPs)
scaffold0996 (138-246)||(1690-1802)
[»] scaffold0080 (1 HSPs)
scaffold0080 (138-245)||(27361-27470)
[»] chr1 (48 HSPs)
chr1 (116-245)||(29642994-29643125)
chr1 (138-254)||(2405761-2405879)
chr1 (116-254)||(28111276-28111413)
chr1 (1-116)||(17902694-17902809)
chr1 (10-116)||(20981466-20981571)
chr1 (1-116)||(28918472-28918587)
chr1 (138-245)||(21110921-21111030)
chr1 (10-116)||(37641974-37642079)
chr1 (120-229)||(50196740-50196849)
chr1 (116-254)||(2794447-2794584)
chr1 (137-254)||(27536298-27536414)
chr1 (138-246)||(49852900-49853010)
chr1 (138-220)||(42022880-42022962)
chr1 (116-244)||(34064936-34065064)
chr1 (148-217)||(41058095-41058164)
chr1 (10-109)||(20964562-20964660)
chr1 (137-254)||(45960512-45960628)
chr1 (154-245)||(21018230-21018323)
chr1 (137-255)||(37183630-37183747)
chr1 (116-197)||(20399072-20399154)
chr1 (10-83)||(49716478-49716551)
chr1 (10-83)||(49719960-49720033)
chr1 (137-254)||(23021687-23021803)
chr1 (137-254)||(49498268-49498384)
chr1 (138-254)||(6070725-6070840)
chr1 (154-245)||(1950222-1950312)
chr1 (138-248)||(45941668-45941779)
chr1 (160-254)||(20448096-20448189)
chr1 (160-254)||(20533863-20533956)
chr1 (137-254)||(31205078-31205194)
chr1 (10-106)||(24200160-24200256)
chr1 (176-244)||(27331550-27331619)
chr1 (116-197)||(3796650-3796731)
chr1 (166-254)||(34552438-34552525)
chr1 (174-255)||(11666759-11666841)
chr1 (116-240)||(23441053-23441176)
chr1 (188-254)||(32505857-32505921)
chr1 (191-244)||(6206184-6206236)
chr1 (185-229)||(16190203-16190246)
chr1 (166-229)||(49716647-49716710)
chr1 (166-229)||(49720129-49720192)
chr1 (188-239)||(13496168-13496218)
chr1 (138-209)||(34732171-34732242)
chr1 (42-71)||(16838886-16838915)
chr1 (42-71)||(16848816-16848845)
chr1 (174-244)||(7635923-7635995)
chr1 (166-240)||(18392669-18392744)
chr1 (138-255)||(30938327-30938445)
[»] scaffold1063 (1 HSPs)
scaffold1063 (138-245)||(2737-2846)
[»] scaffold0015 (1 HSPs)
scaffold0015 (148-255)||(198404-198513)
[»] scaffold0002 (2 HSPs)
scaffold0002 (137-252)||(118214-118331)
scaffold0002 (137-245)||(99007-99117)
[»] scaffold2073 (1 HSPs)
scaffold2073 (138-254)||(627-747)
[»] scaffold0757 (1 HSPs)
scaffold0757 (148-245)||(5612-5711)
[»] scaffold0520 (2 HSPs)
scaffold0520 (138-245)||(1312-1421)
scaffold0520 (138-190)||(8039-8091)
[»] scaffold0233 (1 HSPs)
scaffold0233 (134-254)||(10176-10296)
[»] scaffold1755 (1 HSPs)
scaffold1755 (138-219)||(383-464)
[»] scaffold0412 (1 HSPs)
scaffold0412 (137-254)||(371-491)
[»] scaffold0007 (2 HSPs)
scaffold0007 (154-223)||(248786-248855)
scaffold0007 (138-240)||(92679-92781)
[»] scaffold0005 (1 HSPs)
scaffold0005 (138-254)||(293259-293374)
[»] scaffold0381 (1 HSPs)
scaffold0381 (116-254)||(5166-5303)
[»] scaffold0250 (1 HSPs)
scaffold0250 (137-254)||(19636-19752)
[»] scaffold1809 (1 HSPs)
scaffold1809 (148-245)||(325-423)
[»] scaffold1785 (1 HSPs)
scaffold1785 (154-254)||(168-271)
[»] scaffold0175 (1 HSPs)
scaffold0175 (10-116)||(28565-28671)
[»] scaffold0035 (1 HSPs)
scaffold0035 (154-254)||(62778-62881)
[»] scaffold0962 (1 HSPs)
scaffold0962 (174-254)||(3048-3127)
[»] scaffold0012 (1 HSPs)
scaffold0012 (10-106)||(26794-26890)
[»] scaffold0427 (1 HSPs)
scaffold0427 (163-253)||(3554-3643)
[»] scaffold1048 (1 HSPs)
scaffold1048 (42-106)||(1538-1603)
[»] scaffold0690 (1 HSPs)
scaffold0690 (137-254)||(7481-7594)
[»] scaffold1208 (1 HSPs)
scaffold1208 (154-245)||(440-530)
[»] scaffold0068 (1 HSPs)
scaffold0068 (166-254)||(33730-33817)
[»] scaffold0352 (1 HSPs)
scaffold0352 (188-240)||(2632-2683)
[»] scaffold0116 (1 HSPs)
scaffold0116 (279-323)||(10885-10929)
[»] scaffold0134 (1 HSPs)
scaffold0134 (185-245)||(7530-7596)
[»] scaffold0067 (1 HSPs)
scaffold0067 (10-79)||(27468-27536)


Alignment Details
Target: chr7 (Bit Score: 226; Significance: 1e-124; HSPs: 57)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 226; E-Value: 1e-124
Query Start/End: Original strand, 1 - 254
Target Start/End: Complemental strand, 22232648 - 22232395
Alignment:
Q  1 ttaggaataaagggaggtaaactactcgtataagacaatacgggattcatcggcttaatcattcttctcaaatcatctttcaaccaacttttacttactt 100  Q
    ||||||||||||||||||||||||||| ||||| | |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22232648 ttaggaataaagggaggtaaactactcatataaaataataggggattcatcggcttaatcattcttctcaaatcatctttcaaccaacttttacttactt 22232549  T
Q  101 ttgttacacttaaatctactgcctcagacacttataaaatttacacctcctagatattaactttattgctaagttgagattaacacagtcctcgtggata 200  Q
    ||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  22232548 ttgttacacttaaatctactgcctcaggcacttataaaatttacacatcctagatattaaccttattgctaagttgagattaacacagtcctcgtggata 22232449  T
Q  201 cgaacttattttattacttcgatagttttagtacacttgctaaaatatctatca 254  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22232448 cgaacttattttattacttcgatagttttagtacacttgctaaaatatctatca 22232395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 226; E-Value: 1e-124
Query Start/End: Original strand, 1 - 254
Target Start/End: Original strand, 22254091 - 22254344
Alignment:
Q  1 ttaggaataaagggaggtaaactactcgtataagacaatacgggattcatcggcttaatcattcttctcaaatcatctttcaaccaacttttacttactt 100  Q
    ||||||||||||||||||||||||||| ||||| | |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22254091 ttaggaataaagggaggtaaactactcatataaaataataggggattcatcggcttaatcattcttctcaaatcatctttcaaccaacttttacttactt 22254190  T
Q  101 ttgttacacttaaatctactgcctcagacacttataaaatttacacctcctagatattaactttattgctaagttgagattaacacagtcctcgtggata 200  Q
    ||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  22254191 ttgttacacttaaatctactgcctcaggcacttataaaatttacacatcctagatattaaccttattgctaagttgagattaacacagtcctcgtggata 22254290  T
Q  201 cgaacttattttattacttcgatagttttagtacacttgctaaaatatctatca 254  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22254291 cgaacttattttattacttcgatagttttagtacacttgctaaaatatctatca 22254344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 1 - 231
Target Start/End: Original strand, 22257355 - 22257585
Alignment:
Q  1 ttaggaataaagggaggtaaactactcgtataagacaatacgggattcatcggcttaatcattcttctcaaatcatctttcaaccaacttttacttactt 100  Q
    ||||||||||||||||||||||||||| ||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22257355 ttaggaataaagggaggtaaactactcatataaaacaataggggattcatcggcttaatcattcttctcaaatcatctttcaaccaacttttacttactt 22257454  T
Q  101 ttgttacacttaaatctactgcctcagacacttataaaatttacacctcctagatattaactttattgctaagttgagattaacacagtcctcgtggata 200  Q
    ||||||||||||||||||||||||||| |||||||||||||||||| || ||||||||||| |||||| |||||||||||||||||||||||||||||||    
T  22257455 ttgttacacttaaatctactgcctcaggcacttataaaatttacacatcttagatattaaccttattgttaagttgagattaacacagtcctcgtggata 22257554  T
Q  201 cgaacttattttattacttcgatagttttag 231  Q
    ||| |||||||||||||||||||||||||||    
T  22257555 cgatcttattttattacttcgatagttttag 22257585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 174; E-Value: 2e-93
Query Start/End: Original strand, 1 - 254
Target Start/End: Complemental strand, 11825376 - 11825124
Alignment:
Q  1 ttaggaataaagggaggtaaactactcgtataagacaatacgggattcatcggcttaatcattcttctcaaatcatctttcaaccaacttttacttactt 100  Q
    |||| |||||||||||||||||||||| ||||  |||||| |||||||||||||||||||||  |||||||||||| ||||||| |||||||| ||||||    
T  11825376 ttagtaataaagggaggtaaactactcatatagaacaataggggattcatcggcttaatcatcattctcaaatcatatttcaac-aacttttatttactt 11825278  T
Q  101 ttgttacacttaaatctactgcctcagacacttataaaatttacacctcctagatattaactttattgctaagttgagattaacacagtcctcgtggata 200  Q
    ||  | |||  ||| |||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11825277 tttatgcacacaaacctactgcctcaggcacttataaaatttacacatcctagatattaactttattgctaagttgagattaacacagtcctcgtggata 11825178  T
Q  201 cgaacttattttattacttcgatagttttagtacacttgctaaaatatctatca 254  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  11825177 cgaacttattttattacttcgatagttttagtacacttgctaaaatatttatca 11825124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 162; E-Value: 3e-86
Query Start/End: Original strand, 1 - 254
Target Start/End: Complemental strand, 5826729 - 5826477
Alignment:
Q  1 ttaggaataaagggaggtaaactactcgtataagacaatacgggattcatcggcttaatcattcttctcaaatcatctttcaaccaacttttacttactt 100  Q
    |||| |||||||||||||||||||||| |||||  |||||  |||||||||| | ||||||| |||||| |||||||||||||| |||||||| ||||||    
T  5826729 ttagtaataaagggaggtaaactactcatataaagcaataacggattcatcgacataatcatccttctcgaatcatctttcaac-aacttttatttactt 5826631  T
Q  101 ttgttacacttaaatctactgcctcagacacttataaaatttacacctcctagatattaactttattgctaagttgagattaacacagtcctcgtggata 200  Q
    ||  | |||  ||| |||||||||||| |||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5826630 tttatgcacacaaacctactgcctcaggcacttaaaaaatttacacatcctagatattaactttattgctaagttgagattaacacagtcctcgtggata 5826531  T
Q  201 cgaacttattttattacttcgatagttttagtacacttgctaaaatatctatca 254  Q
     |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5826530 agaacttattttattacttcgatagttttagtacacttgctaaaatatctatca 5826477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 142; E-Value: 3e-74
Query Start/End: Original strand, 44 - 245
Target Start/End: Original strand, 8397972 - 8398171
Alignment:
Q  44 gattcatcggcttaatcattcttctcaaatcatctttcaaccaacttttacttacttttgttacacttaaatctactgcctcagacacttataaaattta 143  Q
    |||||||||| |||||||| ||| ||||||||||||||||| |||||||| ||||||||  | |||  ||| |||||||||||| |||||||||||||||    
T  8397972 gattcatcggtttaatcatccttttcaaatcatctttcaac-aactttta-ttactttttatccacacaaacctactgcctcaggcacttataaaattta 8398069  T
Q  144 cacctcctagatattaactttattgctaagttgagattaacacagtcctcgtggatacgaacttattttattacttcgatagttttagtacacttgctaa 243  Q
    ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8398070 cacatcctagatattaactttattgctaagttgagattaacacagtcctcgtggatacgaacttattttattacttcgatagttttagtacacttgctaa 8398169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 116 - 245
Target Start/End: Original strand, 26153376 - 26153505
Alignment:
Q  116 ctactgcctcagacacttataaaatttacacctcctagatattaactttattgctaagttgagattaacacagtcctcgtggatacgaacttattttatt 215  Q
    |||||||||||  |||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26153376 ctactgcctcatgcacttataaaatttacacatcctatatattaactttattgctaagttgagattaacacagtcctcgtggatacgaacttattttatt 26153475  T
Q  216 acttcgatagttttagtacacttgctaaaa 245  Q
    ||||||||||||||||||||||||||||||    
T  26153476 acttcgatagttttagtacacttgctaaaa 26153505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 111; E-Value: 9e-56
Query Start/End: Original strand, 99 - 245
Target Start/End: Original strand, 8258093 - 8258239
Alignment:
Q  99 ttttgttacacttaaatctactgcctcagacacttataaaatttacacctcctagatattaactttattgctaagttgagattaacacagtcctcgtgga 198  Q
    |||| ||||||  ||| ||||| |||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  8258093 ttttattacacacaaacctactacctcaggcacttataaaatttacacatcctagatattaactttattgctaagttgagattaacacagtcctcgtaga 8258192  T
Q  199 tacgaacttattttattacttcgatagttttagtacacttgctaaaa 245  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||    
T  8258193 tacgaacttattttattacttcgatagttttagtacacttgttaaaa 8258239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 106; E-Value: 8e-53
Query Start/End: Original strand, 120 - 244
Target Start/End: Original strand, 5796760 - 5796885
Alignment:
Q  120 tgcctcagacacttataaaatttacacctcctagatattaactttattgctaagttgagattaacacagtcctcgtggatacgaactta-ttttattact 218  Q
    ||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||    
T  5796760 tgccttagacacttataaaatttacacatcctagatattaactttattgctaagttgagattaacacagtcttcgtggatacgaacttatttttattact 5796859  T
Q  219 tcgatagttttagtacacttgctaaa 244  Q
    ||||||||||||||||||||||||||    
T  5796860 tcgatagttttagtacacttgctaaa 5796885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 1 - 124
Target Start/End: Original strand, 20100741 - 20100864
Alignment:
Q  1 ttaggaataaagggaggtaaactactcgtataagacaatacgggattcatcggcttaatcattcttctcaaatcatctttcaaccaacttttacttactt 100  Q
    ||||||||||||||||||||||||||| |||||  |||||  |||||||||||||||||||||| |||| ||||||||||||| ||||||||||||||||    
T  20100741 ttaggaataaagggaggtaaactactcatataaagcaatagcggattcatcggcttaatcattcatctccaatcatctttcaaacaacttttacttactt 20100840  T
Q  101 ttgttacacttaaatctactgcct 124  Q
     ||||||||| |||||||||||||    
T  20100841 gtgttacactcaaatctactgcct 20100864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 138 - 254
Target Start/End: Original strand, 26557736 - 26557854
Alignment:
Q  138 aatttacacctcctagatattaactttattgctaagttgagattaacacagtcctcgtggatacgaacttattttattacttcgata--gttttagtaca 235  Q
    |||||| || ||||| ||||| ||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||   ||||||||||    
T  26557736 aatttatacatcctaaatatttactttattgctaaattgagattaacacagtcctcgtggatatgaacttattttattacttcgatacgtttttagtaca 26557835  T
Q  236 cttgctaaaatatctatca 254  Q
    |||||||||||||||||||    
T  26557836 cttgctaaaatatctatca 26557854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 138 - 254
Target Start/End: Original strand, 35961337 - 35961455
Alignment:
Q  138 aatttacacctcctagatattaactttattgctaagttgagattaacacagtcctcgtggatacgaacttattttattacttcgat--agttttagtaca 235  Q
    |||||| || ||||| ||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||  | ||||||||||    
T  35961337 aatttatacatcctaaatatttactttattgctaaattgagattaacacagtcctcgtggatacgaacttattttattacttcgatacatttttagtaca 35961436  T
Q  236 cttgctaaaatatctatca 254  Q
    ||| |||||||||||||||    
T  35961437 ctttctaaaatatctatca 35961455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 137 - 245
Target Start/End: Complemental strand, 11397939 - 11397828
Alignment:
Q  137 aaatttacacctcctagatattaactttattgctaagttgagattaacacagtcctcgtggatacgaactt-attttattacttcgat--agttttagta 233  Q
    |||||||||| |||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||  | ||||||||    
T  11397939 aaatttacacatcctagatattaacgttattgctaaattgagattaacacagtcctcgtggatacgaacttaattttattacttcgatgcatttttagta 11397840  T
Q  234 cacttgctaaaa 245  Q
    ||||||||||||    
T  11397839 cacttgctaaaa 11397828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 138 - 246
Target Start/End: Original strand, 10345413 - 10345523
Alignment:
Q  138 aatttacacctcctagatattaactttattgctaagttgagattaacacagtcctcgtggatacgaacttattttattacttcgat--agttttagtaca 235  Q
    |||||| || ||||| ||||| ||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||  | ||||||||||    
T  10345413 aatttatacatcctaaatatttactttattgctaaattgagattaacacaatcctcgtggatacgaacttattttattacttcgatacatttttagtaca 10345512  T
Q  236 cttgctaaaat 246  Q
    |||||||||||    
T  10345513 cttgctaaaat 10345523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 1 - 124
Target Start/End: Original strand, 2349556 - 2349680
Alignment:
Q  1 ttaggaataaagggaggtaaactactcgtataagacaatacgggattcatcggcttaatcattcttctcaaatcatctttc-aaccaacttttacttact 99  Q
    |||||||||||||||||||||||| || |||||  |||||  |||||||||||||||||||||| |||| ||||||||||| ||| ||||| ||||||||    
T  2349556 ttaggaataaagggaggtaaactattcatataaagcaataacggattcatcggcttaatcattcatctccaatcatctttcgaacaaacttatacttact 2349655  T
Q  100 tttgttacacttaaatctactgcct 124  Q
    ||||||||||| ||||||| |||||    
T  2349656 tttgttacactcaaatctaatgcct 2349680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 148 - 245
Target Start/End: Original strand, 48645714 - 48645813
Alignment:
Q  148 tcctagatattaactttattgctaagttgagattaacacagtcctcgtggatacgaacttattttattacttcgat--agttttagtacacttgctaaaa 245  Q
    ||||| ||||| ||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||  | ||||||||||||||||||||    
T  48645714 tcctaaatatttactttattgctaaattgaaattaacacagtcctcgtggatacgaacttattttattacttcgatgcatttttagtacacttgctaaaa 48645813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 148 - 247
Target Start/End: Original strand, 17731067 - 17731168
Alignment:
Q  148 tcctagatattaactttattgctaagttgagattaacacagtcctcgtggatacgaacttattttattacttcgat--agttttagtacacttgctaaaa 245  Q
    ||||| ||||| |||||||||||||  |||||||||||||||||| ||||||||||||||||||||||||||||||  | ||||||||||||||||||||    
T  17731067 tcctaaatattcactttattgctaaactgagattaacacagtccttgtggatacgaacttattttattacttcgatgcatttttagtacacttgctaaaa 17731166  T
Q  246 ta 247  Q
    ||    
T  17731167 ta 17731168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 1 - 121
Target Start/End: Original strand, 42606378 - 42606498
Alignment:
Q  1 ttaggaataaagggaggtaaactactcgtataagacaatacgggattcatcggcttaatcattcttctcaaatcatctttcaaccaacttttacttactt 100  Q
    |||| ||||||||||| |||||||||| || |||  ||||  |||||||||||||||||||||| |||| ||||||||||| | |||| |||||||||||    
T  42606378 ttagtaataaagggagataaactactcatacaaggtaatagcggattcatcggcttaatcattcatctccaatcatctttcgaacaacatttacttactt 42606477  T
Q  101 ttgttacacttaaatctactg 121  Q
    |||||||||| ||||||||||    
T  42606478 ttgttacactcaaatctactg 42606498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 138 - 245
Target Start/End: Complemental strand, 4595886 - 4595777
Alignment:
Q  138 aatttacacctcctagatattaactttattgctaagttgagattaacacagtcctcgtggatacgaacttattttattacttcgat--agttttagtaca 235  Q
    |||||| || ||||| ||||| ||||||||||||| ||||||||||||||||||||||| ||| |||| |||||||||||||||||  | ||||||||||    
T  4595886 aatttatacatcctaaatatttactttattgctaaattgagattaacacagtcctcgtgaatatgaacatattttattacttcgatgcatttttagtaca 4595787  T
Q  236 cttgctaaaa 245  Q
    ||||||||||    
T  4595786 cttgctaaaa 4595777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 138 - 245
Target Start/End: Original strand, 4695718 - 4695827
Alignment:
Q  138 aatttacacctcctagatattaactttattgctaagttgagattaacacagtcctcgtggatacgaacttattttattacttcgat--agttttagtaca 235  Q
    |||||| || ||||| ||||| ||||||||||||| || ||||||||||||||||||||||||| |||||||||||||||||||||  | ||||| ||||    
T  4695718 aatttatacatcctaaatatttactttattgctaaatttagattaacacagtcctcgtggatacaaacttattttattacttcgatgcatttttaataca 4695817  T
Q  236 cttgctaaaa 245  Q
    ||||||||||    
T  4695818 cttgctaaaa 4695827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 116 - 254
Target Start/End: Original strand, 6603662 - 6603800
Alignment:
Q  116 ctactgcctcagacacttata-aaatttacacctcctagatattaactttattgctaagttgagattaacacagtcctcgtggatacgaacttattttat 214  Q
    |||||||||| |||||| | | |||||||||| |||||||||||||| |||||||||| ||||||||||||||||||||||||  ||||  |  |||||     
T  6603662 ctactgcctcggacactaaaagaaatttacacatcctagatattaacgttattgctaaattgagattaacacagtcctcgtgggaacga--tatttttac 6603759  T
Q  215 tacttcgatagt-tttagtacacttgctaaaatatctatca 254  Q
    |||||||||||| ||| |||||||||| |||||||||||||    
T  6603760 tacttcgatagtatttggtacacttgccaaaatatctatca 6603800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 138 - 245
Target Start/End: Complemental strand, 5242048 - 5241937
Alignment:
Q  138 aatttacacctcctagatattaactttattgctaagttgagattaacacagtcctcgtggatacgaactt----attttattacttcgatagttttagta 233  Q
    ||||||||| ||||||||| |||| |||||||||| ||||||||||||||||||  |||||||| |||||    |||||||||||||||| |||||||||    
T  5242048 aatttacacatcctagatagtaaccttattgctaaattgagattaacacagtccctgtggatacaaacttataaattttattacttcgatggttttagta 5241949  T
Q  234 cacttgctaaaa 245  Q
    |||||| |||||    
T  5241948 cacttgataaaa 5241937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 138 - 223
Target Start/End: Complemental strand, 9864620 - 9864535
Alignment:
Q  138 aatttacacctcctagatattaactttattgctaagttgagattaacacagtcctcgtggatacgaacttattttattacttcgat 223  Q
    ||||||||| ||||| ||||| |||||||| |||| |||||||||||||||||||| ||||||||||||||||||||| |||||||    
T  9864620 aatttacacatcctaaatatttactttatttctaaattgagattaacacagtcctcatggatacgaacttattttattgcttcgat 9864535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 151 - 254
Target Start/End: Complemental strand, 13907673 - 13907569
Alignment:
Q  151 tagatattaactttattgctaagttgagattaacacagtcctcgtggatacgaactta-ttttattacttcgatag-ttttagtacacttgctaaaatat 248  Q
    ||||||||||| |||||||||| ||||||||||||||||||| ||| ||| ||||||| |||||| ||||| |||| |||||||||||||||| ||||||    
T  13907673 tagatattaaccttattgctaaattgagattaacacagtccttgtgcatatgaacttatttttatcacttctatagtttttagtacacttgct-aaatat 13907575  T
Q  249 ctatca 254  Q
    ||||||    
T  13907574 ctatca 13907569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 174 - 254
Target Start/End: Original strand, 23776170 - 23776251
Alignment:
Q  174 ttgagattaacacagtcctcgtggatacgaacttatttt-attacttcgatagttttagtacacttgctaaaatatctatca 254  Q
    |||||||||||||||||||||| || ||||||||||||| ||||||||||||||||||||| ||||||||||| || |||||    
T  23776170 ttgagattaacacagtcctcgtagaaacgaacttatttttattacttcgatagttttagtatacttgctaaaagatttatca 23776251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 172 - 245
Target Start/End: Complemental strand, 44363678 - 44363605
Alignment:
Q  172 agttgagattaacacagtcctcgtggatacgaacttattttattacttcgatagttttagtacacttgctaaaa 245  Q
    |||||||||||||||||| |||| ||||||||||||| ||||||||||||||| |||| |||||||||||||||    
T  44363678 agttgagattaacacagttctcgaggatacgaacttactttattacttcgatatttttggtacacttgctaaaa 44363605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 138 - 254
Target Start/End: Complemental strand, 22611610 - 22611495
Alignment:
Q  138 aatttacacctcctagatattaactttattgctaagttgagattaacacagtcctcgtggatacgaacttattttattacttcgat--agttttagtaca 235  Q
    |||||| || ||||| ||||| ||| ||||||||| |||||||||||| ||||||||||  |||||||||||||||||||||||||  | ||||||||||    
T  22611610 aatttatacatcctaaatatttactatattgctaaattgagattaacaaagtcctcgtg--tacgaacttattttattacttcgatgcatttttagtaca 22611513  T
Q  236 cttgctaaaatatctatca 254  Q
    ||| |||||| ||||||||    
T  22611512 cttactaaaa-atctatca 22611495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 202 - 254
Target Start/End: Complemental strand, 23467066 - 23467014
Alignment:
Q  202 gaacttattttattacttcgatagttttagtacacttgctaaaatatctatca 254  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23467066 gaacttattttattacttcgatagttttagtacacttgctaaaatatctatca 23467014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 169 - 225
Target Start/End: Complemental strand, 23467122 - 23467066
Alignment:
Q  169 ctaagttgagattaacacagtcctcgtggatacgaacttattttattacttcgatag 225  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  23467122 ctaagttgagattaacacagtcctcgtgtatacgaacttattttattacttcgatag 23467066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 1 - 130
Target Start/End: Complemental strand, 748062 - 747932
Alignment:
Q  1 ttaggaataaagggaggtaaactactcgtataagacaatacgggattcatcggcttaatcattcttctcaaatcatctttc-aaccaacttttacttact 99  Q
    |||||||||||  |||||||||||||  |||||  |||||  ||||||||  |||||||||||| |||| ||||||||||| ||| ||||| ||||||||    
T  748062 ttaggaataaatagaggtaaactacttatataaagcaatagcggattcattagcttaatcattcatctccaatcatctttcgaacaaacttatacttact 747963  T
Q  100 tttgttacacttaaatctactgcctcagaca 130  Q
    ||||||||| | ||||||| ||||| |||||    
T  747962 tttgttacaatcaaatctattgcctaagaca 747932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 138 - 245
Target Start/End: Original strand, 4543034 - 4543140
Alignment:
Q  138 aatttacacctcctagatattaactttattgctaagttgagattaacacagtcctcgtggatacgaacttattttattacttcgatagt-tttagtacac 236  Q
    |||||| || ||||| ||||| ||||||||||||| ||||||||||||||||||||||||  ||||  |  ||||| |||||||||||| ||||||||||    
T  4543034 aatttatacatcctaaatatttactttattgctaaattgagattaacacagtcctcgtgggaacga--tatttttactacttcgatagtatttagtacac 4543131  T
Q  237 ttgctaaaa 245  Q
    |||||||||    
T  4543132 ttgctaaaa 4543140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 138 - 254
Target Start/End: Complemental strand, 11919741 - 11919623
Alignment:
Q  138 aatttacacctcctagatattaactttattgctaagttgagattaacacagtcctcgtggatacga-acttattttattacttcgatagt-tttagtaca 235  Q
    |||||| || ||||| ||||| |||||||| |||| |||||||||| |||||||||||||  || | | || ||||| |||||||||||| ||||||| |    
T  11919741 aatttatacatcctaaatatttactttatttctaaattgagattaatacagtcctcgtgggaactatattttttttactacttcgatagtatttagtaga 11919642  T
Q  236 cttgctaaaatatctatca 254  Q
    |||||||||||||||||||    
T  11919641 cttgctaaaatatctatca 11919623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 139 - 254
Target Start/End: Complemental strand, 13449665 - 13449551
Alignment:
Q  139 atttacacctcctagatattaactttattgctaagttgagattaacacagtcctcgtggatacgaacttattttattacttcgatagt-tttagtacact 237  Q
    ||||| || ||||| ||||| |||||| |||||| |||||||||||| |||||||||||  ||||  |  ||||| |||||||||||| ||| |||||||    
T  13449665 atttatacatcctaaatatttactttactgctaaattgagattaacatagtcctcgtgggaacga--tatttttactacttcgatagtatttggtacact 13449568  T
Q  238 tgctaaaatatctatca 254  Q
    |||||||||||||||||    
T  13449567 tgctaaaatatctatca 13449551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 5 - 108
Target Start/End: Complemental strand, 8257604 - 8257500
Alignment:
Q  5 gaataaagggaggtaaactactcgtataagacaatacgggattcatcggcttaatcattcttctcaaatcatctttc-aaccaacttttacttacttttg 103  Q
    ||||||||||||||||||||||| |||||  |||||  ||||||||| ||||||| |||| |||| ||||||||||| ||  ||||| || |||||||||    
T  8257604 gaataaagggaggtaaactactcatataaatcaatagcggattcatcagcttaataattcatctccaatcatctttcaaataaacttctatttacttttg 8257505  T
Q  104 ttaca 108  Q
    |||||    
T  8257504 ttaca 8257500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 113 - 254
Target Start/End: Original strand, 16165950 - 16166090
Alignment:
Q  113 aatctactgcctcagacacttata-aaatttacacctcctagatattaactttattgctaagttgagattaacacagtcctcgtggatacgaacttattt 211  Q
    ||||||||||||| | |||| | | |||||||||| |||||||||||||| |||||| ||| ||||||||||||||||||| ||||  ||||  |  |||    
T  16165950 aatctactgcctcgggcactaaaagaaatttacacatcctagatattaacgttattgataaattgagattaacacagtccttgtgggaacga--tatttt 16166047  T
Q  212 tattacttcgatagt-tttagtacacttgctaaaatatctatca 254  Q
    || |||||||||||| ||| |||||||||| |||| ||||||||    
T  16166048 tactacttcgatagtatttggtacacttgccaaaa-atctatca 16166090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 174 - 255
Target Start/End: Complemental strand, 18560061 - 18559978
Alignment:
Q  174 ttgagattaacacagtcctcgtggatacgaactt-attttattacttcgatagtttt-agtacacttgctaaaatatctatcat 255  Q
    ||||||||||||| |||||||||||  ||||||| ||| ||| |||||||||||||| |||||| |||||||||||||||||||    
T  18560061 ttgagattaacacggtcctcgtggaatcgaactttattatatgacttcgatagtttttagtacatttgctaaaatatctatcat 18559978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 137 - 254
Target Start/End: Complemental strand, 23224791 - 23224675
Alignment:
Q  137 aaatttacacctcctagatattaactttattgctaagttgagattaacacagtcctcgtggatacgaacttattttattacttcgatagt-tttagtaca 235  Q
    ||||||| || |||||  |||| || |||||||||| |||| |||||||||||||||||||   |||  ||  |||| |||||||||||| |||||||||    
T  23224791 aaatttatacatcctaattatttaccttattgctaaattgaaattaacacagtcctcgtgggagcgatatt--tttactacttcgatagtatttagtaca 23224694  T
Q  236 cttgctaaaatatctatca 254  Q
    |||||||||||||||||||    
T  23224693 cttgctaaaatatctatca 23224675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 137 - 241
Target Start/End: Complemental strand, 37415309 - 37415206
Alignment:
Q  137 aaatttacacctcctagatattaactttattgctaagttgagattaacacagtcctcgtggatacgaacttattttattacttcgatagt-tttagtaca 235  Q
    ||||||| || ||||| ||||| || |||||||||| ||||||||||||||||||||||||  ||||  |  ||||| |||||||||||| |||||||||    
T  37415309 aaatttatacatcctaaatatttaccttattgctaaattgagattaacacagtcctcgtgggaacga--tatttttactacttcgatagtatttagtaca 37415212  T
Q  236 cttgct 241  Q
    ||||||    
T  37415211 cttgct 37415206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 116 - 240
Target Start/End: Complemental strand, 44017684 - 44017561
Alignment:
Q  116 ctactgcctcagacacttataaaatttacacctcctagatattaactttattgctaagttgagattaacacagtcctcgtggatacgaacttattttatt 215  Q
    |||||||||||| |||| | | ||||||||| ||||| |||||||  |||||||||| |||| |||||||||||||||||||  ||||  |  ||||| |    
T  44017684 ctactgcctcaggcactaaaataatttacacatcctaaatattaatcttattgctaaattgaaattaacacagtcctcgtgggaacga--tatttttact 44017587  T
Q  216 acttcgatagtt-ttagtacacttgc 240  Q
    |||||||||||| || ||||||||||    
T  44017586 acttcgatagttattggtacacttgc 44017561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 137 - 245
Target Start/End: Complemental strand, 45286955 - 45286848
Alignment:
Q  137 aaatttacacctcctagatattaactttattgctaagttgagattaacacagtcctcgtggatacgaacttattttattacttcgatagt-tttagtaca 235  Q
    |||||||||| ||||| |||||||| |||||| ||| |||||||||||| ||||||||| |  ||||  |  ||||| |||||||||||| |||||||||    
T  45286955 aaatttacacatcctaaatattaaccttattgttaaattgagattaacatagtcctcgttggaacga--tatttttactacttcgatagtatttagtaca 45286858  T
Q  236 cttgctaaaa 245  Q
    ||||||||||    
T  45286857 cttgctaaaa 45286848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 10 - 106
Target Start/End: Original strand, 2251977 - 2252073
Alignment:
Q  10 aagggaggtaaactactcgtataagacaatacgggattcatcggcttaatcattcttctcaaatcatc-tttcaaccaacttttacttacttttgtta 106  Q
    |||||||||||  ||||| ||||  |||||| |||||||||||||||||||||||||||  ||||||| |||||| |||| |||| ||||||||||||    
T  2251977 aagggaggtaat-tactcatatagaacaataggggattcatcggcttaatcattcttctttaatcatcttttcaaacaacctttatttacttttgtta 2252073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 138 - 245
Target Start/End: Original strand, 4547106 - 4547212
Alignment:
Q  138 aatttacacctcctagatattaactttattgctaagttgagattaacacagtcctcgtggatacgaacttattttattacttcgatagt-tttagtacac 236  Q
    |||||| || ||||| ||||| |||||||||||||  |||||||||||||||||||||||  ||  | |  ||||| |||||||||||| ||||||||||    
T  4547106 aatttatacatcctaaatatttactttattgctaaactgagattaacacagtcctcgtgggaac--aatatttttactacttcgatagtatttagtacac 4547203  T
Q  237 ttgctaaaa 245  Q
    |||||||||    
T  4547204 ttgctaaaa 4547212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 10 - 106
Target Start/End: Complemental strand, 23598775 - 23598679
Alignment:
Q  10 aagggaggtaaactactcgtataagacaatacgggattcatcggcttaatcattcttctcaaatcatcttt-caaccaacttttacttacttttgtta 106  Q
    |||||||||||  ||||| ||||  |||||| |||||||||||||||||||||||||||  |||||||||| ||| |||| |||||||| ||||||||    
T  23598775 aagggaggtaat-tactcatatagaacaataggggattcatcggcttaatcattcttctttaatcatctttccaaacaacctttacttatttttgtta 23598679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 10 - 106
Target Start/End: Original strand, 26182408 - 26182504
Alignment:
Q  10 aagggaggtaaactactcgtataagacaatacgggattcatcggcttaatcattcttctcaaatcatc-tttcaaccaacttttacttacttttgtta 106  Q
    |||||||||||  ||||| ||||  |||||| |||||||||||||||||||||||||||  ||||||| |||||| |||| |||| ||||||||||||    
T  26182408 aagggaggtaat-tactcatatagaacaataggggattcatcggcttaatcattcttctttaatcatcttttcaaacaacctttatttacttttgtta 26182504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 158 - 245
Target Start/End: Original strand, 24918438 - 24918525
Alignment:
Q  158 taactttattgctaagttgagattaacacagtcctcgtggatacgaacttat-tttattacttcgatagttttagtacacttgctaaaa 245  Q
    |||| |||||||||| |||| ||||||| ||| |||||||||||||||||   |||||||||| ||||||||||||| |||||||||||    
T  24918438 taaccttattgctaatttga-attaacagagttctcgtggatacgaactttgatttattactttgatagttttagtatacttgctaaaa 24918525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 206 - 245
Target Start/End: Complemental strand, 13809323 - 13809284
Alignment:
Q  206 ttattttattacttcgatagttttagtacacttgctaaaa 245  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  13809323 ttattttattacttcgatagttttagtacacttgctaaaa 13809284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 138 - 246
Target Start/End: Original strand, 8277224 - 8277331
Alignment:
Q  138 aatttacacctcctagatattaactttattgctaagttgagattaacacagtcctcgtggatacgaacttattttattacttcgatagt-tttagtacac 236  Q
    |||||| || ||||| ||||| |||||||| |||| ||||||||||||||||||||||||  ||||  |  ||||| |||||||||||| ||| ||||||    
T  8277224 aatttatacatcctaaatatttactttatttctaaattgagattaacacagtcctcgtggtaacga--tatttttactacttcgatagtatttggtacac 8277321  T
Q  237 ttgctaaaat 246  Q
    |||| |||||    
T  8277322 ttgccaaaat 8277331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 174 - 254
Target Start/End: Complemental strand, 18560899 - 18560817
Alignment:
Q  174 ttgagattaacacagtcctcgtggatacgaactt-attttattacttcgatagtttt-agtacacttgctaaaatatctatca 254  Q
    |||||| |||||  ||||||| ||| || ||||| ||| |||||||||||||||||| |||||||||||||||||||||||||    
T  18560899 ttgagaataacatggtcctcgcggaaacaaactttattatattacttcgatagtttttagtacacttgctaaaatatctatca 18560817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 137 - 245
Target Start/End: Complemental strand, 45290366 - 45290259
Alignment:
Q  137 aaatttacacctcctagatattaactttattgctaagttgagattaacacagtcctcgtggatacgaacttattttattacttcgatagt-tttagtaca 235  Q
    |||||||||| ||||| |||||||| |||||| ||| |||||||||||| ||||||||| |  ||||  |  ||||| |||| ||||||| |||||||||    
T  45290366 aaatttacacatcctaaatattaaccttattgttaaattgagattaacatagtcctcgttggaacga--tatttttactactacgatagtatttagtaca 45290269  T
Q  236 cttgctaaaa 245  Q
    ||||||||||    
T  45290268 cttgctaaaa 45290259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 136 - 197
Target Start/End: Complemental strand, 2441159 - 2441098
Alignment:
Q  136 aaaatttacacctcctagatattaactttattgctaagttgagattaacacagtcctcgtgg 197  Q
    |||||||| || ||||| ||||| | ||||||||||| ||||||||||||||||||||||||    
T  2441159 aaaatttatacatcctaaatatttattttattgctaaattgagattaacacagtcctcgtgg 2441098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 209 - 253
Target Start/End: Original strand, 13842939 - 13842983
Alignment:
Q  209 ttttattacttcgatagttttagtacacttgctaaaatatctatc 253  Q
    ||||| ||||||||||||||| |||||||||||||||||||||||    
T  13842939 ttttactacttcgatagttttggtacacttgctaaaatatctatc 13842983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 10 - 109
Target Start/End: Complemental strand, 710029 - 709931
Alignment:
Q  10 aagggaggtaaactactcgtataagacaatacgggattcatcggcttaatcattcttctcaaatcatctttcaaccaacttttacttacttttgttacac 109  Q
    ||||||||||| |||||| ||||  |||||| || ||||||||||||||||||||||||  |||||| |||  | ||  |||||||||| ||||||||||    
T  710029 aagggaggtaa-ctactcatatagaacaatagggaattcatcggcttaatcattcttctttaatcattttttcaacactttttacttacgtttgttacac 709931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 180 - 245
Target Start/End: Complemental strand, 5747486 - 5747422
Alignment:
Q  180 ttaacacagtcctcgtggatacgaacttattttattacttcgatag-ttttagtacacttgctaaaa 245  Q
    ||||| ||||||||||||||||||||  ||||||||||||| |||| |||||||||| |||||||||    
T  5747486 ttaacgcagtcctcgtggatacgaac--attttattacttcaatagtttttagtacatttgctaaaa 5747422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 203 - 245
Target Start/End: Original strand, 44363675 - 44363717
Alignment:
Q  203 aacttattttattacttcgatagttttagtacacttgctaaaa 245  Q
    |||| ||||||||||||||||| ||||||||||||||||||||    
T  44363675 aactcattttattacttcgatatttttagtacacttgctaaaa 44363717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 210 - 245
Target Start/End: Original strand, 7227835 - 7227870
Alignment:
Q  210 tttattacttcgatagttttagtacacttgctaaaa 245  Q
    |||||||||||||||||||||||||| |||||||||    
T  7227835 tttattacttcgatagttttagtacagttgctaaaa 7227870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 42 - 80
Target Start/End: Original strand, 26460602 - 26460639
Alignment:
Q  42 gggattcatcggcttaatcattcttctcaaatcatcttt 80  Q
    |||||||||||||||||||||||||||| ||||||||||    
T  26460602 gggattcatcggcttaatcattcttctc-aatcatcttt 26460639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 188 - 240
Target Start/End: Complemental strand, 3540988 - 3540937
Alignment:
Q  188 gtcctcgtggatacgaacttattttattacttcgatagttttagtacacttgc 240  Q
    |||||||||||||||||||| | ||| ||||| ||||||||| ||||||||||    
T  3540988 gtcctcgtggatacgaactt-tattactactttgatagttttggtacacttgc 3540937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0064 (Bit Score: 215; Significance: 1e-118; HSPs: 2)
Name: scaffold0064
Description:

Target: scaffold0064; HSP #1
Raw Score: 215; E-Value: 1e-118
Query Start/End: Original strand, 255 - 521
Target Start/End: Complemental strand, 4753 - 4487
Alignment:
Q  255 tatatgcagcatctgatgcaacaaatcctcgagaaaaccgaacatgtactcaataagaccctttcgttggtcttcagatgccgcacagacaccatcagga 354  Q
    |||||||||| || |||||| || |||||| ||||||||||||||||||||||||||||||||||||||||| ||| |||||| ||||||||||||||||    
T  4753 tatatgcagcgtccgatgcagcagatcctcaagaaaaccgaacatgtactcaataagaccctttcgttggtcctcaaatgccgtacagacaccatcagga 4654  T
Q  355 agcgtgtcttcaacatcatccccaaatccactttccaccgaacatcctcccaacttgaaaacaccataagcaatgtttcttggctattacgtatctccca 454  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||  ||||||||     
T  4653 agcgtgtcttcaacatcatccccaaagccactttccaccgaacatcctcccaacttgaaaacaccataggcaatgtttcttggctattatatatctcccg 4554  T
Q  455 ctgcaatgaagatcatgatagtgaaaatcacatccttccttccataattttaaatgaccccatggtt 521  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4553 ctgcaatgaagatcatgatagtgaaaatcacatccttccttccataattttaaatgaccccatggtt 4487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0064; HSP #2
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 279 - 500
Target Start/End: Complemental strand, 21940 - 21719
Alignment:
Q  279 atcctcgagaaaaccgaacatgtactcaataagaccctttcgttggtcttcagatgccgcacagacaccatcaggaagcgtgtcttcaacatcatcccca 378  Q
    ||||||||| ||||||||||| |||||||| | |||||||| ||| || |||  |||||| || ||| ||||| ||||||  |||||| ||||||| | |    
T  21940 atcctcgagcaaaccgaacatatactcaatgaaaccctttcattgatcctcaagtgccgcccaaacaacatcaagaagcgcatcttcaccatcatctcaa 21841  T
Q  379 aatccactttccaccgaacatcctcccaacttgaaaacaccataagcaatgtttcttggctattacgtatctcccactgcaatgaagatcatgatagtga 478  Q
          |||||| |  |||||| ||||||||||||||| |||| | | ||||||| |||||  ||| |||||||| || | ||||| ||||||| |||||    
T  21840 ttgatgctttccgcaaaacatcttcccaacttgaaaactccatcaacgatgtttcctggcttctacatatctcccgctccgatgaaaatcatgacagtga 21741  T
Q  479 aaatcacatccttccttccata 500  Q
     |||| ||||||||||||||||    
T  21740 gaatctcatccttccttccata 21719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 178; Significance: 9e-96; HSPs: 41)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 178; E-Value: 9e-96
Query Start/End: Original strand, 1 - 254
Target Start/End: Original strand, 14188269 - 14188521
Alignment:
Q  1 ttaggaataaagggaggtaaactactcgtataagacaatacgggattcatcggcttaatcattcttctcaaatcatctttcaaccaacttttacttactt 100  Q
    ||||||||||||||||||||||||||| ||||  |||||| ||||||||||||||||||||| ||||||||||||||||| ||| |||||||  ||||||    
T  14188269 ttaggaataaagggaggtaaactactcatatagaacaataggggattcatcggcttaatcatccttctcaaatcatcttttaac-aacttttgtttactt 14188367  T
Q  101 ttgttacacttaaatctactgcctcagacacttataaaatttacacctcctagatattaactttattgctaagttgagattaacacagtcctcgtggata 200  Q
    ||  |||||  ||| |||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  14188368 tttatacacacaaacctactgcctcaggcacttataaaatttacacatcctagatattaactttattgctaagttgagattaacgcagtcctcgtggata 14188467  T
Q  201 cgaacttattttattacttcgatagttttagtacacttgctaaaatatctatca 254  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  14188468 cgaacttattttattacttcgatagttttagtacacttgctaaaatatttatca 14188521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 164; E-Value: 2e-87
Query Start/End: Original strand, 9 - 256
Target Start/End: Complemental strand, 18695988 - 18695742
Alignment:
Q  9 aaagggaggtaaactactcgtataagacaatacgggattcatcggcttaatcattcttctcaaatcatctttcaaccaacttttacttacttttgttaca 108  Q
    ||||||||||||||||||| ||||  |||||| ||||||||||||||||||||||| || | ||||||||||||| ||||||| ||||||||||||||||    
T  18695988 aaagggaggtaaactactcatatagaacaataggggattcatcggcttaatcattcatcaccaatcatctttcaaacaactttcacttacttttgttaca 18695889  T
Q  109 cttaaatctactgcctcagacacttataaaatttacacctcctagatattaactttattgctaagttgagattaacacagtcctcgtggatacgaactta 208  Q
    |  ||| ||||||||| || ||||| |||||||||||| |||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||    
T  18695888 cacaaacctactgccttaggcacttctaaaatttacacatcctagatattaactttattgctaagttgaaattaacatagtcctcgtggatacgaactta 18695789  T
Q  209 ttttattacttcgatagttttagtacacttgctaaaatatctatcata 256  Q
    |||||||||||||||||||||||| |||||||||||| ||||||||||    
T  18695788 ttttattacttcgatagttttagtgcacttgctaaaa-atctatcata 18695742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 162; E-Value: 3e-86
Query Start/End: Original strand, 1 - 254
Target Start/End: Original strand, 20262653 - 20262905
Alignment:
Q  1 ttaggaataaagggaggtaaactactcgtataagacaatacgggattcatcggcttaatcattcttctcaaatcatctttcaaccaacttttacttactt 100  Q
    |||| |||||||||||||||||||||| ||||  |||||| ||||||||||||||||||||| |||||||| |||||||||||| |||||||| ||||||    
T  20262653 ttagtaataaagggaggtaaactactcatatagaacaataggggattcatcggcttaatcatccttctcaagtcatctttcaac-aacttttatttactt 20262751  T
Q  101 ttgttacacttaaatctactgcctcagacacttataaaatttacacctcctagatattaactttattgctaagttgagattaacacagtcctcgtggata 200  Q
    ||  | |||  ||| ||||||||| || |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  20262752 tttatgcacacaaacctactgcctgaggcacttataaaatttacacatcctagatattaactttattgctaagttgagattaacacagtcttcgtggata 20262851  T
Q  201 cgaacttattttattacttcgatagttttagtacacttgctaaaatatctatca 254  Q
    |||||||| | |||||||||||||||||||||||||||| ||||||||||||||    
T  20262852 cgaacttactgtattacttcgatagttttagtacacttgttaaaatatctatca 20262905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 162; E-Value: 3e-86
Query Start/End: Original strand, 1 - 254
Target Start/End: Original strand, 21049283 - 21049535
Alignment:
Q  1 ttaggaataaagggaggtaaactactcgtataagacaatacgggattcatcggcttaatcattcttctcaaatcatctttcaaccaacttttacttactt 100  Q
    |||| |||||||||||||||||||||| ||||  |||||| ||||||||||||||||||||| |||||||| |||||||||||| |||||||| ||||||    
T  21049283 ttagtaataaagggaggtaaactactcatatagaacaataggggattcatcggcttaatcatccttctcaagtcatctttcaac-aacttttatttactt 21049381  T
Q  101 ttgttacacttaaatctactgcctcagacacttataaaatttacacctcctagatattaactttattgctaagttgagattaacacagtcctcgtggata 200  Q
    ||  | |||  ||| ||||||||| || |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  21049382 tttatgcacacaaacctactgcctgaggcacttataaaatttacacatcctagatattaactttattgctaagttgagattaacacagtcttcgtggata 21049481  T
Q  201 cgaacttattttattacttcgatagttttagtacacttgctaaaatatctatca 254  Q
    |||||||| | |||||||||||||||||||||||||||| ||||||||||||||    
T  21049482 cgaacttactgtattacttcgatagttttagtacacttgttaaaatatctatca 21049535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 153; E-Value: 8e-81
Query Start/End: Original strand, 1 - 245
Target Start/End: Original strand, 5964354 - 5964597
Alignment:
Q  1 ttaggaataaagggaggtaaactactcgtataagacaatacgggattcatcggcttaatcattcttctcaaatcatctttcaaccaacttttacttactt 100  Q
    |||| |||||| ||||||||||||||| ||||  |||||| ||||||||||||||||||||| ||||||||||||| ||||||| |||||||| ||||||    
T  5964354 ttagtaataaaaggaggtaaactactcatatagaacaataggggattcatcggcttaatcatccttctcaaatcatatttcaac-aacttttatttactt 5964452  T
Q  101 ttgttacacttaaatctactgcctcagacacttataaaatttacacctcctagatattaactttattgctaagttgagattaacacagtcctcgtggata 200  Q
    ||  | |||  ||| |||||| ||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  5964453 tttatgcacacaaacctactgtctcaggcacttataaaatttacacatcctagatattaactttattgctaagttgagattaacacagtcctcatggata 5964552  T
Q  201 cgaacttattttattacttcgatagttttagtacacttgctaaaa 245  Q
    |||||||||||||||||||||||||||||| ||||||| ||||||    
T  5964553 cgaacttattttattacttcgatagttttaatacacttactaaaa 5964597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 116 - 245
Target Start/End: Original strand, 31986499 - 31986628
Alignment:
Q  116 ctactgcctcagacacttataaaatttacacctcctagatattaactttattgctaagttgagattaacacagtcctcgtggatacgaacttattttatt 215  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  31986499 ctactgcctcagacacttataaaatttacacatcctagatattaactttattgctaagttgagattaacacagtcctcgtgcatacgaacttattttatt 31986598  T
Q  216 acttcgatagttttagtacacttgctaaaa 245  Q
    ||||||||||||||||||||||||||||||    
T  31986599 acttcgatagttttagtacacttgctaaaa 31986628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 115; E-Value: 4e-58
Query Start/End: Original strand, 116 - 254
Target Start/End: Original strand, 30645697 - 30645835
Alignment:
Q  116 ctactgcctcagacacttataaaatttacacctcctagatattaactttattgctaagttgagattaacacagtcctcgtggatacgaacttattttatt 215  Q
    |||||||||||| |||||||||||||||||| ||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30645697 ctactgcctcaggcacttataaaatttacacatcctatatatttactttattgctaagttgagattaacacagtcctcgtggatacgaacttattttatt 30645796  T
Q  216 acttcgatagttttagtacacttgctaaaatatctatca 254  Q
    ||||||||| ||||||||||||||||||||||| |||||    
T  30645797 acttcgataattttagtacacttgctaaaatatttatca 30645835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 116 - 245
Target Start/End: Original strand, 31981572 - 31981701
Alignment:
Q  116 ctactgcctcagacacttataaaatttacacctcctagatattaactttattgctaagttgagattaacacagtcctcgtggatacgaacttattttatt 215  Q
    |||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||    
T  31981572 ctactgcctcaggcacttataaaatttacacatcctagatattaactttattgctaagttgagattaacacagtcctcatagatacgaacttattttatt 31981671  T
Q  216 acttcgatagttttagtacacttgctaaaa 245  Q
    ||||||||||||||||||||||||||||||    
T  31981672 acttcgatagttttagtacacttgctaaaa 31981701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 129 - 245
Target Start/End: Original strand, 4868479 - 4868596
Alignment:
Q  129 cacttataaaatttacacctcctagatattaactttattgctaagttgagattaacacagtcctcgtggatacgaactta-ttttattacttcgatagtt 227  Q
    |||||||||||||||||| ||||| ||||||||||||||||||| |||| ||||||||| ||||||| |||||||||||| |||||||||||||||||||    
T  4868479 cacttataaaatttacacatcctaaatattaactttattgctaatttgatattaacacattcctcgttgatacgaacttatttttattacttcgatagtt 4868578  T
Q  228 ttagtacacttgctaaaa 245  Q
    ||||||||| || |||||    
T  4868579 ttagtacacatgttaaaa 4868596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 138 - 259
Target Start/End: Original strand, 14421980 - 14422103
Alignment:
Q  138 aatttacacctcctagatattaactttattgctaagttgagattaacacagtcctcgtggatacgaacttattttattacttcgat--agttttagtaca 235  Q
    |||||| || ||||| ||||| |||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||  | ||||||||||    
T  14421980 aatttatacatcctaaatatttactttattactaaattgagattaacacagtcctcgtggatacgaacttattttattacttcgatgcatttttagtaca 14422079  T
Q  236 cttgctaaaatatctatcatatat 259  Q
     |||||||||||||||||| ||||    
T  14422080 tttgctaaaatatctatcacatat 14422103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 138 - 254
Target Start/End: Original strand, 23644058 - 23644174
Alignment:
Q  138 aatttacacctcctagatattaactttattgctaagttgagattaacacagtcctcgtggatacgaacttattttattacttcgatagttttagtacact 237  Q
    |||||| || ||||| ||||| |||||||| |||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||    
T  23644058 aatttatacatcctaaatatttactttatttctaaattgagattaacacagtcctcgtggatacgaacttattttattatttcgatagttttagttcact 23644157  T
Q  238 tgctaaaatatctatca 254  Q
    ||||||||  |||||||    
T  23644158 tgctaaaaagtctatca 23644174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 5 - 124
Target Start/End: Original strand, 22654364 - 22654483
Alignment:
Q  5 gaataaagggaggtaaactactcgtataagacaatacgggattcatcggcttaatcattcttctcaaatcatctttcaaccaacttttacttacttttgt 104  Q
    ||||||||||||||||||||||| |||||  |||||   ||||||||||||||||||||| |||| ||||||||||||| |||||||||||||||| |||    
T  22654364 gaataaagggaggtaaactactcatataaagcaatagcagattcatcggcttaatcattcatctccaatcatctttcaaacaacttttacttacttgtgt 22654463  T
Q  105 tacacttaaatctactgcct 124  Q
    |||||| |||||||||||||    
T  22654464 tacactcaaatctactgcct 22654483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 137 - 254
Target Start/End: Complemental strand, 14589504 - 14589387
Alignment:
Q  137 aaatttacacctcctagatattaactttattgctaagttgagattaacacagtcctcgtggatacgaactt-attttattacttcgatagttttagtaca 235  Q
    |||||||||| ||||| | |||||| |||||||||| ||||||||||||||||||||||| |||||||||| ||||||||||||||||| ||||||||||    
T  14589504 aaatttacacatcctacacattaacattattgctaaattgagattaacacagtcctcgtgaatacgaacttaattttattacttcgataattttagtaca 14589405  T
Q  236 cttgctaaaatatctatca 254  Q
    |||||||||| ||||||||    
T  14589404 cttgctaaaa-atctatca 14589387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 116 - 254
Target Start/End: Complemental strand, 45155173 - 45155031
Alignment:
Q  116 ctactgcctcagacacttataaaatttacacctcctagatattaactttattgctaagttgagattaacacagtcctcgtggatacgaactt----attt 211  Q
    |||||||||| | |||| | | ||||||||| |||||||||||||| |||||||||| ||||||||||||| ||||  ||||||||||||||    ||||    
T  45155173 ctactgcctcgggcactaaaataatttacacatcctagatattaaccttattgctaaattgagattaacacggtccctgtggatacgaacttataaattt 45155074  T
Q  212 tattacttcgatagttttagtacacttgctaaaatatctatca 254  Q
    ||||||||||||||||||||||||||||||||||  |||||||    
T  45155073 tattacttcgatagttttagtacacttgctaaaaagtctatca 45155031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 138 - 229
Target Start/End: Complemental strand, 5980174 - 5980083
Alignment:
Q  138 aatttacacctcctagatattaactttattgctaagttgagattaacacagtcctcgtggatacgaacttattttattacttcgatagtttt 229  Q
    |||||| || ||||| ||||| ||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  5980174 aatttatacatcctaaatatttactttattgctaaattgagattaacacagtcctcgtggatacgaacttatgttattacttcgatagtttt 5980083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 137 - 245
Target Start/End: Complemental strand, 36710520 - 36710408
Alignment:
Q  137 aaatttacacctcctagatattaactttattgctaagttgagattaacacagtcctcgtggatacgaacttat----tttattacttcgatagttttagt 232  Q
    |||||||||| ||||||||||||| ||||||||||| ||||||||||||||||||  ||||||||||||||||    |||||||||| |||||| |||||    
T  36710520 aaatttacacatcctagatattaaatttattgctaaattgagattaacacagtccctgtggatacgaacttataaactttattactttgatagtcttagt 36710421  T
Q  233 acacttgctaaaa 245  Q
    |||||||||||||    
T  36710420 acacttgctaaaa 36710408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 148 - 257
Target Start/End: Complemental strand, 5538642 - 5538532
Alignment:
Q  148 tcctagatattaactttattgctaagttgagattaacacagtcctcgtggatacgaacttattttattacttcgat--agttttagtacacttgctaaaa 245  Q
    ||||| ||||| |||||||| |||| |||| ||||||||||||||| |||||||||||||||||||||||||||||  | ||||||||||||||||||||    
T  5538642 tcctaaatatttactttatttctaaattgaaattaacacagtcctcatggatacgaacttattttattacttcgatacatttttagtacacttgctaaaa 5538543  T
Q  246 tatctatcatat 257  Q
     |||||||||||    
T  5538542 -atctatcatat 5538532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 137 - 245
Target Start/End: Complemental strand, 33883232 - 33883122
Alignment:
Q  137 aaatttacacctcctagatattaactttattgctaagttgagattaacacagtcctcgtggatacgaactt-attttattacttcgat--agttttagta 233  Q
    |||||||||| ||||| |||||||| | |||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||  | ||||||||    
T  33883232 aaatttacacatcctatatattaacgt-attgctaaattgagattaacacagtcctcgtggatacgaacttaattttattacttcgatgcatttttagta 33883134  T
Q  234 cacttgctaaaa 245  Q
    ||||||||||||    
T  33883133 cacttgctaaaa 33883122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 148 - 245
Target Start/End: Original strand, 12583268 - 12583367
Alignment:
Q  148 tcctagatattaactttattgctaagttgagattaacacagtcctcgtggatacgaacttattttattacttcgat--agttttagtacacttgctaaaa 245  Q
    ||||| ||||| ||||||||||||| |||||||||||| ||||||||||||||| |||||||||||||| ||||||  | ||||||||||||||||||||    
T  12583268 tcctaaatatttactttattgctaaattgagattaacatagtcctcgtggatacaaacttattttattatttcgatacatttttagtacacttgctaaaa 12583367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 117 - 254
Target Start/End: Complemental strand, 18825792 - 18825655
Alignment:
Q  117 tactgcctcagacacttata-aaatttacacctcctagatattaactttattgctaagttgagattaacacagtcctcgtggatacgaacttattttatt 215  Q
    ||||||||||| |||| | | |||||||||| |||||||||||||| |||||||||| ||||||||||||||||||||||||  ||||  |  ||||| |    
T  18825792 tactgcctcaggcactaaaagaaatttacacatcctagatattaacgttattgctaaattgagattaacacagtcctcgtgggaacga--tatttttact 18825695  T
Q  216 acttcgatagt-tttagtacacttgctaaaatatctatca 254  Q
    ||||||||||| ||| |||||||||| |||| ||||||||    
T  18825694 acttcgatagtatttggtacacttgccaaaaaatctatca 18825655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 148 - 244
Target Start/End: Original strand, 25231330 - 25231429
Alignment:
Q  148 tcctagatattaactttattgctaagttgagattaacacagtcctcgtggatacgaacttat----tttattacttcgatagttttagtacacttgctaa 243  Q
    ||||| |||||||  |||||||||| ||||||||||||||||| | ||||||||||||||||    ||||||||||||||||||||||||||||||||||    
T  25231330 tcctaaatattaaacttattgctaaattgagattaacacagtctt-gtggatacgaacttataaaatttattacttcgatagttttagtacacttgctaa 25231428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 139 - 254
Target Start/End: Original strand, 10664190 - 10664303
Alignment:
Q  139 atttacacctcctagatattaactttattgctaagttgagattaacacagtcctcgtggatacgaacttattttattacttcgatagt-tttagtacact 237  Q
    |||||||| ||||| |||||||| |||||||||| ||||||||||||||||||||||||  ||||  |  ||||| |||||||||||| |||||||||||    
T  10664190 atttacacatcctaaatattaaccttattgctaaattgagattaacacagtcctcgtgggaacga--tatttttactacttcgatagtatttagtacact 10664287  T
Q  238 tgctaaaatatctatca 254  Q
    |||||||| ||||||||    
T  10664288 tgctaaaa-atctatca 10664303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 5 - 124
Target Start/End: Complemental strand, 27863571 - 27863448
Alignment:
Q  5 gaataaagggaggtaaa-ctactcgtataagacaatacgggattcatcggcttaatcattcttctcaaatcatctttcaaccaa---cttttacttactt 100  Q
    ||||||||||||||||| |||||| ||||   |||||  |||||||||||||||||||||| |||| ||||||||||||| |||    |||| |||||||    
T  27863571 gaataaagggaggtaaaactactcatatagagcaatagcggattcatcggcttaatcattcatctccaatcatctttcaaacaaactttttttcttactt 27863472  T
Q  101 ttgttacacttaaatctactgcct 124  Q
    |||||||||| |||||||||||||    
T  27863471 ttgttacactcaaatctactgcct 27863448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 116 - 254
Target Start/End: Original strand, 16953991 - 16954128
Alignment:
Q  116 ctactgcctcagacacttataaaatttacacctcctagatattaactttattgctaagttgagattaacacagtcctcgtggatacgaacttattttatt 215  Q
    |||||||||||| |||| | | ||||||||| ||||| |||||||| |||||| | | ||||||||||||||||||||||||  ||||  |  ||||| |    
T  16953991 ctactgcctcaggcactaaaataatttacacatcctaaatattaacgttattgttgaattgagattaacacagtcctcgtgggaacga--tatttttact 16954088  T
Q  216 acttcgatagt-tttagtacacttgctaaaatatctatca 254  Q
    ||||||||||| ||| |||||||||| |||||||||||||    
T  16954089 acttcgatagtatttggtacacttgccaaaatatctatca 16954128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 137 - 259
Target Start/End: Complemental strand, 18824278 - 18824157
Alignment:
Q  137 aaatttacacctcctagatattaactttattgctaagttgagattaacacagtcctcgtggatacgaacttattttattacttcgatagt-tttagtaca 235  Q
    |||||||||| |||||||||||||| |||||||||| ||||||||||||||||||||||||  ||||  |  ||||| |||||||||||| ||| |||||    
T  18824278 aaatttacacatcctagatattaacgttattgctaaattgagattaacacagtcctcgtgggaacga--tatttttactacttcgatagtatttggtaca 18824181  T
Q  236 cttgctaaaatatctatcatatat 259  Q
    || || |||| | |||||||||||    
T  18824180 ctagccaaaaaacctatcatatat 18824157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 138 - 245
Target Start/End: Complemental strand, 37681403 - 37681291
Alignment:
Q  138 aatttacacctcctagatattaactttattgctaagttgagattaacacagtcctc-gtggatacgaactt----attttattacttcgatagttttagt 232  Q
    ||||||||| ||||||||| |||| |||||| ||| |||||||||||||||||| | |||||||| |||||    ||||||||||||||||| | |||||    
T  37681403 aatttacacatcctagatagtaaccttattgttaaattgagattaacacagtcccctgtggatacaaacttataaattttattacttcgatattattagt 37681304  T
Q  233 acacttgctaaaa 245  Q
    |||||||||||||    
T  37681303 acacttgctaaaa 37681291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 138 - 254
Target Start/End: Complemental strand, 22173814 - 22173700
Alignment:
Q  138 aatttacacctcctagatattaactttattgctaagttgagattaacacagtcctcgtggatacgaacttattttattacttcgatagttttagtacact 237  Q
    |||||| || ||||| ||||| |||||||| |||| ||||||||||||| ||||||||||| ||||  | |||||| ||||||||||||||| |||||||    
T  22173814 aatttatacatcctaaatatttactttatttctaaattgagattaacactgtcctcgtggaaacga--taattttactacttcgatagttttggtacact 22173717  T
Q  238 tgctaaaatatctatca 254  Q
    ||| ||||  |||||||    
T  22173716 tgccaaaaattctatca 22173700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 138 - 254
Target Start/End: Original strand, 23597445 - 23597560
Alignment:
Q  138 aatttacacctcctagatattaactttattgctaagttgagattaacacagtcctcgtggatacgaacttattttattacttcgatagt-tttagtacac 236  Q
    |||||| || ||||| ||||| |||||||| |||| ||||||||||||||||||||||||  ||||  |  ||||| |||||||||||| ||||||| ||    
T  23597445 aatttatacatcctaaatatttactttatttctaaattgagattaacacagtcctcgtgggaacga--tatttttactacttcgatagtatttagtatac 23597542  T
Q  237 ttgctaaaatatctatca 254  Q
    |||||||||||| |||||    
T  23597543 ttgctaaaatatttatca 23597560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 10 - 83
Target Start/End: Original strand, 453694 - 453767
Alignment:
Q  10 aagggaggtaaactactcgtataagacaatacgggattcatcggcttaatcattcttctcaaatcatctttcaa 83  Q
    |||||||||||||||||| ||||  |||||| | ||||||||||||||||||||| |||| |||||||||||||    
T  453694 aagggaggtaaactactcatatagaacaatatgagattcatcggcttaatcattcatctccaatcatctttcaa 453767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 138 - 245
Target Start/End: Complemental strand, 18721168 - 18721062
Alignment:
Q  138 aatttacacctcctagatattaactttattgctaagttgagattaacacagtcctcgtggatacgaacttattttattacttcgatagt-tttagtacac 236  Q
    ||||||||| ||||| |||||||| |||||||||| ||||||||||||||||||||||||  ||||  |  ||||| |||||| ||||| ||||||| ||    
T  18721168 aatttacacatcctaaatattaaccttattgctaaattgagattaacacagtcctcgtgggaacga--tatttttactacttcaatagtatttagtatac 18721071  T
Q  237 ttgctaaaa 245  Q
    |||||||||    
T  18721070 ttgctaaaa 18721062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 138 - 242
Target Start/End: Complemental strand, 5584314 - 5584211
Alignment:
Q  138 aatttacacctcctagatattaactttattgctaagttgagattaacacagtcctcgtggatacgaacttattttattacttcgatagt-tttagtacac 236  Q
    ||||||||| ||||| |||||||| |||||||||| |||| ||||||||||||||||||   ||||  |  ||||| |||||||||||| ||||||||||    
T  5584314 aatttacacatcctaaatattaaccttattgctaaattgaaattaacacagtcctcgtgagaacga--tatttttactacttcgatagtatttagtacac 5584217  T
Q  237 ttgcta 242  Q
    ||||||    
T  5584216 ttgcta 5584211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 163 - 224
Target Start/End: Complemental strand, 41836295 - 41836233
Alignment:
Q  163 ttattgctaagttgagattaacacagtcctcgtggatacgaactta-ttttattacttcgata 224  Q
    |||||||||| |||||||||||||||||||| |||||||||||||| |||||||| |||||||    
T  41836295 ttattgctaaattgagattaacacagtcctcatggatacgaacttatttttattatttcgata 41836233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 138 - 245
Target Start/End: Original strand, 20887782 - 20887889
Alignment:
Q  138 aatttacacctcctagatattaactttattgctaagttgagattaacacagtcctcgtggatacgaacttattttattacttcgatagt-tttagtacac 236  Q
    |||||| || ||||| |||||  ||||||| |||| ||||||||||||||||||| ||||  ||||  || |||||||||||||||||| ||||||| ||    
T  20887782 aatttatacatcctaaatatttcctttatttctaaattgagattaacacagtccttgtgggaacgatatt-ttttattacttcgatagtatttagtatac 20887880  T
Q  237 ttgctaaaa 245  Q
    |||||||||    
T  20887881 ttgctaaaa 20887889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 35 - 109
Target Start/End: Complemental strand, 24903472 - 24903398
Alignment:
Q  35 acaatacgggattcatcggcttaatcattcttctcaaatcatctttcaaccaacttttacttacttttgttacac 109  Q
    |||||| |||||||||||||||||||||||||||  ||||||||||  | ||  |||||||||| ||||||||||    
T  24903472 acaataggggattcatcggcttaatcattcttctttaatcatcttttcaacactttttacttacgtttgttacac 24903398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 116 - 254
Target Start/End: Complemental strand, 25591383 - 25591245
Alignment:
Q  116 ctactgcctcagacacttataaaatttacacctcctagatattaactttattgctaagttgagattaacacagtcctcgtggatacgaacttattttatt 215  Q
    ||||| |||||| |||| | | ||||||||| ||||| |||||||| |||| ||||| ||||||||||||||||  ||||||  ||||  |  |||||      
T  25591383 ctactacctcaggcactaaaataatttacacatcctaaatattaaccttatcgctaaattgagattaacacagttttcgtgggaacga--tatttttacc 25591286  T
Q  216 acttcgatagt-tttagtacacttgct-aaaatatctatca 254  Q
    ||||||||| | ||||||||||||||| |||||||||||||    
T  25591285 acttcgataatatttagtacacttgctaaaaatatctatca 25591245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 138 - 245
Target Start/End: Complemental strand, 43681756 - 43681658
Alignment:
Q  138 aatttacacctcctagatattaactttattgctaagttgagattaacacagtcctcgtggatacgaacttattttattacttcgat--agttttagtaca 235  Q
    ||||||||| ||||| ||||| ||||||||||||| |||||||||||||           |||| |||||||||||||||||||||  | ||||||||||    
T  43681756 aatttacacatcctaaatatttactttattgctaaattgagattaacac-----------atacaaacttattttattacttcgatgcatttttagtaca 43681668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 10 - 106
Target Start/End: Original strand, 24435138 - 24435234
Alignment:
Q  10 aagggaggtaaactactcgtataagacaatacgggattcatcggcttaatcattcttctcaaatcatctt-tcaaccaacttttacttacttttgtta 106  Q
    |||||||||||  ||||| ||||  |||||| || ||||||||||||||||||||||||  ||||||||| |||| |||| |||| | ||||||||||    
T  24435138 aagggaggtaat-tactcatatagaacaatagggaattcatcggcttaatcattcttctttaatcatcttctcaaacaacctttattcacttttgtta 24435234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 10 - 106
Target Start/End: Original strand, 24445184 - 24445280
Alignment:
Q  10 aagggaggtaaactactcgtataagacaatacgggattcatcggcttaatcattcttctcaaatcatctt-tcaaccaacttttacttacttttgtta 106  Q
    |||||||||||  ||||| ||||  |||||| || ||||||||||||||||||||||||  ||||||||| |||| |||| |||| | ||||||||||    
T  24445184 aagggaggtaat-tactcatatagaacaatagggaattcatcggcttaatcattcttctttaatcatcttctcaaacaacctttattcacttttgtta 24445280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 43 - 106
Target Start/End: Complemental strand, 17013012 - 17012948
Alignment:
Q  43 ggattcatcggcttaatcattcttctcaaatcatc-tttcaaccaacttttacttacttttgtta 106  Q
    |||||||||||||||||| | |||||  ||||||| |||||| |||| |||||||||||||||||    
T  17013012 ggattcatcggcttaatcgtccttctttaatcatcttttcaaacaacatttacttacttttgtta 17012948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 43 - 106
Target Start/End: Original strand, 17544189 - 17544253
Alignment:
Q  43 ggattcatcggcttaatcattcttctcaaatcatc-tttcaaccaacttttacttacttttgtta 106  Q
    |||||||||||||||||| | |||||  ||||||| |||||| |||| |||||||||||||||||    
T  17544189 ggattcatcggcttaatcgtccttctttaatcatcttttcaaacaacatttacttacttttgtta 17544253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 188 - 254
Target Start/End: Complemental strand, 39659776 - 39659712
Alignment:
Q  188 gtcctcgtggatacgaacttattttattacttcgatagttttagtacacttgctaaaatatctatca 254  Q
    |||||||||||||||||||| | ||| ||||||||||||||  ||||||||||  ||||||||||||    
T  39659776 gtcctcgtggatacgaactt-tattactacttcgatagtttcggtacacttgc-caaatatctatca 39659712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 177; Significance: 4e-95; HSPs: 46)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 177; E-Value: 4e-95
Query Start/End: Original strand, 1 - 245
Target Start/End: Original strand, 14966328 - 14966571
Alignment:
Q  1 ttaggaataaagggaggtaaactactcgtataagacaatacgggattcatcggcttaatcattcttctcaaatcatctttcaaccaacttttacttactt 100  Q
    |||| |||||||||||||||||||||| ||||| |||||| ||||||||||||||||||||| ||||||||||||| ||||||| ||||| || ||||||    
T  14966328 ttagtaataaagggaggtaaactactcatataaaacaataggggattcatcggcttaatcatccttctcaaatcatatttcaac-aacttatatttactt 14966426  T
Q  101 ttgttacacttaaatctactgcctcagacacttataaaatttacacctcctagatattaactttattgctaagttgagattaacacagtcctcgtggata 200  Q
    ||  | |||  |||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14966427 tttatgcacacaaatctactgcctcaggcacttataaaatttacacatcctagatattaactttattgctaagttgagattaacacagtcctcgtggata 14966526  T
Q  201 cgaacttattttattacttcgatagttttagtacacttgctaaaa 245  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  14966527 cgaacttattttattacttcgatagttttagtacacttgctaaaa 14966571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 156; E-Value: 1e-82
Query Start/End: Original strand, 6 - 245
Target Start/End: Original strand, 14969813 - 14970051
Alignment:
Q  6 aataaagggaggtaaactactcgtataagacaatacgggattcatcggcttaatcattcttctcaaatcatctttcaaccaacttttacttacttttgtt 105  Q
    |||||||||||||||||||||  ||||| |||||| || |||||||||||||||||| ||||||||||||| ||||||| ||||| ||  |||||||  |    
T  14969813 aataaagggaggtaaactacttatataaaacaatagggtattcatcggcttaatcatccttctcaaatcatatttcaac-aacttatatatactttttat 14969911  T
Q  106 acacttaaatctactgcctcagacacttataaaatttacacctcctagatattaactttattgctaagttgagattaacacagtcctcgtggatacgaac 205  Q
     |||  |||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||    
T  14969912 gcacacaaatctactgcctcaggcacttataaaatttacacatcctagatattaactttattgctaagttgagattaacatagtcctcatggatacgaac 14970011  T
Q  206 ttattttattacttcgatagttttagtacacttgctaaaa 245  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  14970012 ttattttattacttcgatagttttagtacacttgctaaaa 14970051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 150; E-Value: 5e-79
Query Start/End: Original strand, 6 - 247
Target Start/End: Complemental strand, 3826834 - 3826595
Alignment:
Q  6 aataaagggaggtaaactactcgtataagacaatacgggattcatcggcttaatcattcttctcaaatcatctttcaaccaacttttacttacttttgtt 105  Q
    |||||||||||||||||||||| |||||  |||||  |||||||||||||||||||| ||| ||||||||||||||||| |||||||| || |||||  |    
T  3826834 aataaagggaggtaaactactcatataaagcaatagcggattcatcggcttaatcatccttttcaaatcatctttcaac-aactttta-ttgctttttat 3826737  T
Q  106 acacttaaatctactgcctcagacacttataaaatttacacctcctagatattaactttattgctaagttgagattaacacagtcctcgtggatacgaac 205  Q
     |||  ||| |||||||||||| |||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  3826736 gcacacaaacctactgcctcaggcacttataaaatttacacatcctaaatattaactttattgctaagttgagattaacacagtccttgtggatacgaac 3826637  T
Q  206 ttattttattacttcgatagttttagtacacttgctaaaata 247  Q
    |||| |||||||||||||||||||||||||||||||||||||    
T  3826636 ttatcttattacttcgatagttttagtacacttgctaaaata 3826595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 149; E-Value: 2e-78
Query Start/End: Original strand, 1 - 245
Target Start/End: Complemental strand, 13095740 - 13095497
Alignment:
Q  1 ttaggaataaagggaggtaaactactcgtataagacaatacgggattcatcggcttaatcattcttctcaaatcatctttcaaccaacttttacttactt 100  Q
    |||| |||||||||||||||||||||| ||||  |||||| ||||||||||||||||||||| ||||||||||||||||||||| |||||||| ||||||    
T  13095740 ttagtaataaagggaggtaaactactcatatagaacaataggggattcatcggcttaatcatccttctcaaatcatctttcaac-aacttttatttactt 13095642  T
Q  101 ttgttacacttaaatctactgcctcagacacttataaaatttacacctcctagatattaactttattgctaagttgagattaacacagtcctcgtggata 200  Q
    ||  | |||  ||| |||||||||||| |||||||||||||| ||  || ||||||||||||||||||||||||||||||||||| |||| |||||||||    
T  13095641 tttatgcacacaaacctactgcctcaggcacttataaaatttgcaaatcttagatattaactttattgctaagttgagattaacaaagtcatcgtggata 13095542  T
Q  201 cgaacttattttattacttcgatagttttagtacacttgctaaaa 245  Q
    | ||||||||||||||||||||||||||||||||| |||||||||    
T  13095541 caaacttattttattacttcgatagttttagtacatttgctaaaa 13095497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 116 - 254
Target Start/End: Original strand, 34502564 - 34502702
Alignment:
Q  116 ctactgcctcagacacttataaaatttacacctcctagatattaactttattgctaagttgagattaacacagtcctcgtggatacgaacttattttatt 215  Q
    |||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  34502564 ctactgcctcaggcacttataaaatttacacatcctagatattaactttattgctaagttgagattaacacagtcctcgtggatacgaacttattttact 34502663  T
Q  216 acttcgatagttttagtacacttgctaaaatatctatca 254  Q
    |||||||||||||||||||||||||||||||||||||||    
T  34502664 acttcgatagttttagtacacttgctaaaatatctatca 34502702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 116 - 245
Target Start/End: Complemental strand, 5618113 - 5617984
Alignment:
Q  116 ctactgcctcagacacttataaaatttacacctcctagatattaactttattgctaagttgagattaacacagtcctcgtggatacgaacttattttatt 215  Q
    |||||||| ||  |||||||||||||||||| || |||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  5618113 ctactgccacatgcacttataaaatttacacatcatagatattaattttattgctaagttgagattaacacagtcctcgtggatacaaacttattttatt 5618014  T
Q  216 acttcgatagttttagtacacttgctaaaa 245  Q
    ||||||||||||||||||||||||||||||    
T  5618013 acttcgatagttttagtacacttgctaaaa 5617984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 116 - 245
Target Start/End: Original strand, 5260028 - 5260161
Alignment:
Q  116 ctactgcctcagacacttataaaatttacacctcctagatattaactttattgctaagttgagattaacacagtcctcgtggatacgaactt----attt 211  Q
    |||||||||| | |||| | | ||||||||| |||||||||||||| |||||||||| |||||||||||| |||||| ||||||||||||||    ||||    
T  5260028 ctactgcctcgggcactaaaataatttacacatcctagatattaaccttattgctaaattgagattaacatagtccttgtggatacgaacttataaattt 5260127  T
Q  212 tattacttcgatagttttagtacacttgctaaaa 245  Q
    |||||||||||||||||||||||| |||||||||    
T  5260128 tattacttcgatagttttagtacatttgctaaaa 5260161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 112 - 226
Target Start/End: Complemental strand, 9839306 - 9839193
Alignment:
Q  112 aaatctactgcctcagacacttataaaatttacacctcctagatattaactttattgctaagttgagattaacacagtcctcgtggatacgaactta-tt 210  Q
    ||||||| ||||| ||||||||||||||||||||| ||||||||  |||||||||||||||||||||||||||||| ||||||||| |||||| ||| ||    
T  9839306 aaatctattgcctaagacacttataaaatttacacatcctagat--taactttattgctaagttgagattaacacaatcctcgtgggtacgaaattattt 9839209  T
Q  211 ttattacttcgatagt 226  Q
    ||||||||||||||||    
T  9839208 ttattacttcgatagt 9839193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 116 - 256
Target Start/End: Original strand, 9954182 - 9954321
Alignment:
Q  116 ctactgcctcagacacttataaaatttacacctcctagatattaactttattgctaagttgagattaacacagtcctcgtggatacgaacttattttatt 215  Q
    |||||||||||| |||| | | ||||||||| ||||| |||||||| |||||||||| ||||||||||||||||||||||||  ||||  |  ||||| |    
T  9954182 ctactgcctcaggcactaaaataatttacacatcctaaatattaaccttattgctaaattgagattaacacagtcctcgtgggaacga--tatttttact 9954279  T
Q  216 acttcgatagt-tttagtacacttgctaaaatatctatcata 256  Q
    ||||||||||| ||||||||||||||||||||||||||||||    
T  9954280 acttcgatagtatttagtacacttgctaaaatatctatcata 9954321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 148 - 255
Target Start/End: Original strand, 10290236 - 10290345
Alignment:
Q  148 tcctagatattaactttattgctaagttgagattaacacagtcctcgtggatacgaacttattttattacttcgat--agttttagtacacttgctaaaa 245  Q
    ||||| ||||| ||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||  | ||||||||||||||||||||    
T  10290236 tcctaaatattcactttattgctaaattgagattaacacagtcctcgtggatacaaacttattttattacttcgatacatttttagtacacttgctaaaa 10290335  T
Q  246 tatctatcat 255  Q
      ||||||||    
T  10290336 agtctatcat 10290345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 116 - 254
Target Start/End: Complemental strand, 1125640 - 1125502
Alignment:
Q  116 ctactgcctcagacacttata-aaatttacacctcctagatattaactttattgctaagttgagattaacacagtcctcgtggatacgaacttattttat 214  Q
    |||||||||||| |||| | | |||||||||| |||||||||||||| |||||||||| |||||||||||||||||||| |||  ||||  |  |||||     
T  1125640 ctactgcctcaggcactaaaagaaatttacacatcctagatattaacgttattgctaaattgagattaacacagtcctcatgggaacga--tatttttac 1125543  T
Q  215 tacttcgatagt-tttagtacacttgctaaaatatctatca 254  Q
    |||||||||||| ||||||||||||||||||||||||||||    
T  1125542 tacttcgatagtatttagtacacttgctaaaatatctatca 1125502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 138 - 246
Target Start/End: Original strand, 24371458 - 24371567
Alignment:
Q  138 aatttacacctcctagatattaactttattgctaagttgagattaacacagtcctcgtggatacgaactta-ttttattacttcgatagttttagtacac 236  Q
    ||||||||| || |||||| ||||  | ||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||    
T  24371458 aatttacacatcttagataataacaattttgctaaattgagattaacacagtcctcgtggatacgaacttatttttattacttcgataattttagtacac 24371557  T
Q  237 ttgctaaaat 246  Q
    ||| ||||||    
T  24371558 ttgttaaaat 24371567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 138 - 229
Target Start/End: Complemental strand, 23842671 - 23842580
Alignment:
Q  138 aatttacacctcctagatattaactttattgctaagttgagattaacacagtcctcgtggatacgaacttattttattacttcgatagtttt 229  Q
    |||||| || ||||| ||||| | ||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  23842671 aatttatacatcctaaatatttattttattgctaaattgagattaacacagtcctcgtggatacgaacttattttattatttcgatagtttt 23842580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 138 - 245
Target Start/End: Complemental strand, 14281400 - 14281289
Alignment:
Q  138 aatttacacctcctagatattaactttattgctaagttgagattaacacagtcctcgtggatacgaactt----attttattacttcgatagttttagta 233  Q
    ||||||||| |||||||||||||| |||||||||| |||||||||||||||||   |||||||| |||||    ||||||||||||| ||||||||||||    
T  14281400 aatttacacatcctagatattaaccttattgctaaattgagattaacacagtctctgtggatacaaacttataaattttattacttctatagttttagta 14281301  T
Q  234 cacttgctaaaa 245  Q
    ||||||||||||    
T  14281300 cacttgctaaaa 14281289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 138 - 245
Target Start/End: Complemental strand, 28107635 - 28107524
Alignment:
Q  138 aatttacacctcctagatattaactttattgctaagttgagattaacacagtcctcgtggatacgaactt----attttattacttcgatagttttagta 233  Q
    ||||||||| |||||||||||||| ||| |||||| |||||||||||||| |||  ||||||||||||||    ||||||||||||||||||||||||||    
T  28107635 aatttacacatcctagatattaaccttagtgctaaattgagattaacacaatccctgtggatacgaacttataaattttattacttcgatagttttagta 28107536  T
Q  234 cacttgctaaaa 245  Q
    |||||| |||||    
T  28107535 cacttgttaaaa 28107524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 138 - 245
Target Start/End: Complemental strand, 28111687 - 28111576
Alignment:
Q  138 aatttacacctcctagatattaactttattgctaagttgagattaacacagtcctcgtggatacgaactt----attttattacttcgatagttttagta 233  Q
    ||||||| | |||||||||||| | ||| |||||| ||||||||||||||||||  ||||||||||||||    ||||||||||||||||||||||||||    
T  28111687 aatttacgcatcctagatattatccttagtgctaaattgagattaacacagtccatgtggatacgaacttataaattttattacttcgatagttttagta 28111588  T
Q  234 cacttgctaaaa 245  Q
    ||||||||||||    
T  28111587 cacttgctaaaa 28111576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 116 - 254
Target Start/End: Original strand, 13005411 - 13005553
Alignment:
Q  116 ctactgcctcagacacttataaaatttacacctcctagatattaactttattgctaagttgagattaacacagtcctcgtggatacgaacttat----tt 211  Q
    |||||||||||| ||  || | |||||| || |||||||||||||  |||||||||| ||||||||||||||  ||  ||||||||||||||||    ||    
T  13005411 ctactgcctcaggcaaataaataatttaaacatcctagatattaatcttattgctaaattgagattaacacaacccatgtggatacgaacttataaattt 13005510  T
Q  212 tattacttcgatagttttagtacacttgctaaaatatctatca 254  Q
    ||||||||||||||||||||||||||||||||||  |||||||    
T  13005511 tattacttcgatagttttagtacacttgctaaaaattctatca 13005553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 138 - 245
Target Start/End: Original strand, 23008300 - 23008409
Alignment:
Q  138 aatttacacctcctagatattaactttattgctaagttgagattaacacagtcctcgtggatacgaactta-ttttattacttcgatagt-tttagtaca 235  Q
    ||||||||| ||||| ||||||||||||||||| | |||||||||||||||||||| ||||||||| ||||  |||| |||||||||||| |||||||||    
T  23008300 aatttacacatcctaaatattaactttattgcttaattgagattaacacagtcctcatggatacgatcttagatttactacttcgatagtatttagtaca 23008399  T
Q  236 cttgctaaaa 245  Q
    ||||||||||    
T  23008400 cttgctaaaa 23008409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 138 - 245
Target Start/End: Complemental strand, 23780064 - 23779955
Alignment:
Q  138 aatttacacctcctagatattaactttattgctaagttgagattaacacagtcctcgtggatacgaactta-ttttattacttcgatagt-tttagtaca 235  Q
    ||||||||| ||||| ||||||||||||||||| | |||||||||||||||||||| ||||||||| ||||  |||| |||||||||||| |||||||||    
T  23780064 aatttacacatcctaaatattaactttattgcttaattgagattaacacagtcctcatggatacgatcttagatttactacttcgatagtatttagtaca 23779965  T
Q  236 cttgctaaaa 245  Q
    ||||||||||    
T  23779964 cttgctaaaa 23779955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 17231953 - 17232068
Alignment:
Q  1 ttaggaataaagggaggtaaactactcgtataagacaatacgggattcatcggcttaatcattcttctcaaatcatctttcaaccaacttttacttactt 100  Q
    |||| |||||||||||||||||||||  ||||  |||||| |||||||||||||||||||| || |||| |||||||||| || ||||||| | ||||||    
T  17231953 ttagtaataaagggaggtaaactacttatatagaacaataggggattcatcggcttaatcactcatctccaatcatcttttaaacaactttcatttactt 17232052  T
Q  101 ttgttacacttaaatc 116  Q
    |||||||||| |||||    
T  17232053 ttgttacactcaaatc 17232068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 138 - 245
Target Start/End: Complemental strand, 17106501 - 17106392
Alignment:
Q  138 aatttacacctcctagatattaactttattgctaagttgagattaacacagtcctcgtggatacgaacttattttattacttcgat--agttttagtaca 235  Q
    |||||| || ||||| ||||| |||||||||  || ||||||||||||| ||| ||||||||||||||||||||||||||||||||  | ||||||||||    
T  17106501 aatttatacatcctaaatatttactttattgtgaaattgagattaacactgtcttcgtggatacgaacttattttattacttcgatacatttttagtaca 17106402  T
Q  236 cttgctaaaa 245  Q
    ||||||||||    
T  17106401 cttgctaaaa 17106392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 174 - 255
Target Start/End: Original strand, 20186020 - 20186103
Alignment:
Q  174 ttgagattaacacagtcctcgtggatacgaacttattttattacttcgat--agttttagtacacttgctaaaatatctatcat 255  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||  | ||||||| ||||||||||||  ||||||||    
T  20186020 ttgagattaacacagtcctcgtggatacgaacttattttattacttcgatacatttttagtgcacttgctaaaaagtctatcat 20186103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 174 - 255
Target Start/End: Complemental strand, 22149971 - 22149888
Alignment:
Q  174 ttgagattaacacagtcctcgtggatacgaacttattttattacttcgat--agttttagtacacttgctaaaatatctatcat 255  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||  | ||||||| ||||||||||||  ||||||||    
T  22149971 ttgagattaacacagtcctcgtggatacgaacttattttattacttcgatacatttttagtgcacttgctaaaaagtctatcat 22149888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 138 - 229
Target Start/End: Original strand, 23848023 - 23848114
Alignment:
Q  138 aatttacacctcctagatattaactttattgctaagttgagattaacacagtcctcgtggatacgaacttattttattacttcgatagtttt 229  Q
    |||||| || ||||| ||||| |||||| || ||| |||||||||||||||||||||||||||||||||||||||||||  |||||||||||    
T  23848023 aatttatacatcctaaatatttactttagtgttaaattgagattaacacagtcctcgtggatacgaacttattttattatgtcgatagtttt 23848114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 138 - 245
Target Start/End: Original strand, 6514237 - 6514347
Alignment:
Q  138 aatttacacctcctagatattaactttattgctaagttgagattaacacagtcctcgtggatacgaacttat----tttattacttcgatagttttagta 233  Q
    ||||||||| |||||||||||| ||| |||   || ||||||||||||||||||| || |||||||||||||    ||||||||||||||||||||||||    
T  6514237 aatttacacatcctagatattacctt-attataaaattgagattaacacagtccttgtagatacgaacttataaattttattacttcgatagttttagta 6514335  T
Q  234 cacttgctaaaa 245  Q
    ||||||||||||    
T  6514336 cacttgctaaaa 6514347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 137 - 245
Target Start/End: Complemental strand, 23382053 - 23381946
Alignment:
Q  137 aaatttacacctcctagatattaactttattgctaagttgagattaacacagtcctcgtggatacgaacttattttattacttcgatagt-tttagtaca 235  Q
    ||||||| || ||||| ||||| ||||||||||||| ||||||||||||||||||||||||  ||||  |  |||||||||||||||||| |||||||||    
T  23382053 aaatttatacatcctaaatatttactttattgctaaattgagattaacacagtcctcgtgggaacga--tatttttattacttcgatagtatttagtaca 23381956  T
Q  236 cttgctaaaa 245  Q
    ||||||||||    
T  23381955 cttgctaaaa 23381946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 138 - 254
Target Start/End: Original strand, 30655699 - 30655814
Alignment:
Q  138 aatttacacctcctagatattaactttattgctaagttgagattaacacagtcctcgtggatacgaacttattttattacttcgatagt-tttagtacac 236  Q
    |||||| || ||||| ||||| |||||||| |||| ||||||||||||||||||| ||||  ||||  |  |||||||||||||||||| ||||||||||    
T  30655699 aatttatacatcctaaatatttactttatttctaaattgagattaacacagtccttgtgggaacga--tatttttattacttcgatagtatttagtacac 30655796  T
Q  237 ttgctaaaatatctatca 254  Q
    ||||||||||||||||||    
T  30655797 ttgctaaaatatctatca 30655814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 116 - 247
Target Start/End: Complemental strand, 5737966 - 5737836
Alignment:
Q  116 ctactgcctcagacacttataaaatttacacctcctagatattaactttattgctaagttgagattaacacagtcctcgtggatacgaacttattttatt 215  Q
    |||||||||||| || | | | ||||||||| |||||||||||||| |||||||||| ||||||||||||||||||| | ||| ||||  |  ||||| |    
T  5737966 ctactgcctcaggcattaaaataatttacacatcctagatattaaccttattgctaaattgagattaacacagtccttgcggaaacga--tatttttact 5737869  T
Q  216 acttcgatagt-tttagtacacttgctaaaata 247  Q
    ||||||||||| ||||||||||||| |||||||    
T  5737868 acttcgatagtatttagtacacttgataaaata 5737836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 10 - 83
Target Start/End: Original strand, 11410870 - 11410943
Alignment:
Q  10 aagggaggtaaactactcgtataagacaatacgggattcatcggcttaatcattcttctcaaatcatctttcaa 83  Q
    |||||||||||||||||| ||||| |||||| ||||||||||||||||||||||| |||| |||||||||||||    
T  11410870 aagggaggtaaactactcatataaaacaataggggattcatcggcttaatcattcatctccaatcatctttcaa 11410943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 116 - 243
Target Start/End: Original strand, 2372551 - 2372686
Alignment:
Q  116 ctactgcctcagacacttataaaatttacacctcctagatattaactttattgctaagttgagattaacacagtcctcgtggat----acgaactt---- 207  Q
    ||||| |||| |||||| | | ||||||||  |||||||||||||| |||||||||| |||||||||||||||||   ||||||    || |||||        
T  2372551 ctacttcctcggacactaaaataatttacaaatcctagatattaaccttattgctaaattgagattaacacagtctctgtggatacaaacaaacttataa 2372650  T
Q  208 attttattacttcgatagttttagtacacttgctaa 243  Q
    ||||||||||||||||||||||||||||||||||||    
T  2372651 attttattacttcgatagttttagtacacttgctaa 2372686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 137 - 245
Target Start/End: Complemental strand, 23384633 - 23384526
Alignment:
Q  137 aaatttacacctcctagatattaactttattgctaagttgagattaacacagtcctcgtggatacgaacttattttattacttcgatagt-tttagtaca 235  Q
    ||||||| || ||||| ||||| |||||||| |||| |||| |||||||||||||||||||  ||||  |  |||||||||||||||||| |||||||||    
T  23384633 aaatttatacatcctaaatatttactttatttctaaattgaaattaacacagtcctcgtgggaacga--tatttttattacttcgatagtatttagtaca 23384536  T
Q  236 cttgctaaaa 245  Q
    ||||||||||    
T  23384535 cttgctaaaa 23384526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 112 - 205
Target Start/End: Original strand, 2846520 - 2846613
Alignment:
Q  112 aaatctactgcctcagacacttataaaatttacacctcctagatattaactttattgctaagttgagattaacacagtcctcgtggatacgaac 205  Q
    ||||||||||||||||||||  | | ||||||||| ||||||||| |||| |||||||||   ||||||||||||| |||| ||||||||||||    
T  2846520 aaatctactgcctcagacaccaaaataatttacacatcctagatagtaaccttattgctagactgagattaacacaatccttgtggatacgaac 2846613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 137 - 245
Target Start/End: Original strand, 11402500 - 11402608
Alignment:
Q  137 aaatttacacctcctagatattaactttattgctaagttgagattaacacagtcctcgtggatacgaacttattttattacttcgatagt-tttagtaca 235  Q
    |||||||||| ||||| || ||||| ||||||||||  |||||||||||||||||| ||||  ||||  || |||||||||||||||| | |||||||||    
T  11402500 aaatttacacatcctaaattttaaccttattgctaaactgagattaacacagtccttgtgggaacgatatt-ttttattacttcgataatatttagtaca 11402598  T
Q  236 cttgctaaaa 245  Q
    ||||||||||    
T  11402599 cttgctaaaa 11402608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 174 - 256
Target Start/End: Complemental strand, 11192429 - 11192346
Alignment:
Q  174 ttgagattaacacagtcctcgtggatacgaactt-attttattacttcgatag-ttttagtacacttgctaaaatatctatcata 256  Q
    ||||||||||||| || |||||||| |||||||| ||| |||||||||||||| |||||||||||||||| ||||||||||||||    
T  11192429 ttgagattaacacggtactcgtggaaacgaacttaattgtattacttcgatagtttttagtacacttgct-aaatatctatcata 11192346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 138 - 254
Target Start/End: Complemental strand, 11188080 - 11187963
Alignment:
Q  138 aatttacacctcctagatattaactttattgctaagttgagattaacacagtcctcgtggatacgaacttattttattacttcgatagt-tttagtacac 236  Q
    |||||| || ||||| ||||| |||||||| |||| ||||||||||||||||||| ||||  ||||  || ||||| |||||||||||| |||||| |||    
T  11188080 aatttatacatcctaaatatttactttatttctaaattgagattaacacagtccttgtgggaacgatatt-ttttactacttcgatagtatttagtgcac 11187982  T
Q  237 ttgct-aaaatatctatca 254  Q
    ||||| |||||||||||||    
T  11187981 ttgctaaaaatatctatca 11187963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 129 - 245
Target Start/End: Original strand, 28849070 - 28849187
Alignment:
Q  129 cacttataaaatttacacctcctagatattaactttattgctaagttgagattaacacagtcctcgtggatacgaacttattt-tattacttcgatagtt 227  Q
    ||||| ||||||||| ||  | |||||| ||||  ||||||||| |||||||||||| |||| || ||||||| || ||| || |||||||| |||||||    
T  28849070 cacttgtaaaatttatacaccatagataataaccatattgctaatttgagattaacatagtcatcatggatactaatttaattgtattactttgatagtt 28849169  T
Q  228 ttagtacacttgctaaaa 245  Q
    |||| |||||||||||||    
T  28849170 ttagcacacttgctaaaa 28849187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 116 - 246
Target Start/End: Original strand, 2379450 - 2379579
Alignment:
Q  116 ctactgcctcagacacttataaaatttacacctcctagatattaactttattgctaagttgagattaacacagtcctcgtggatacgaacttattttatt 215  Q
    |||||||||||| |||| | | ||||||||| || || |||||||| |||||||||| ||||||||||||  ||||||||||  ||||  |  ||||| |    
T  2379450 ctactgcctcaggcactaaaataatttacacatcttaaatattaaccttattgctaaattgagattaacagtgtcctcgtgggaacga--tatttttact 2379547  T
Q  216 acttcgatagt-tttagtacacttgctaaaat 246  Q
    ||||||||||| ||| |||||||||| |||||    
T  2379548 acttcgatagtatttggtacacttgccaaaat 2379579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 35 - 106
Target Start/End: Original strand, 22920659 - 22920731
Alignment:
Q  35 acaatacgggattcatcggcttaatcattcttctcaaatcatc-tttcaaccaacttttacttacttttgtta 106  Q
    |||||| |||||||||||||||||||||||||||  ||||||| |||||| |||| |||| ||||||||||||    
T  22920659 acaataggggattcatcggcttaatcattcttctttaatcatcttttcaaacaacctttatttacttttgtta 22920731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 137 - 246
Target Start/End: Complemental strand, 26942316 - 26942208
Alignment:
Q  137 aaatttacacctcctagatattaactttattgctaagttgagattaacacagtcctcgtggatacgaacttattttattacttcgatagt-tttagtaca 235  Q
    ||||||| || ||||| ||||| ||||||||| ||| |||||||||||||||||| |||||  ||  | |  ||||| |||||||||||| |||||||||    
T  26942316 aaatttatacatcctaaatatttactttattgataatttgagattaacacagtccacgtgggaac--aatatttttactacttcgatagtatttagtaca 26942219  T
Q  236 cttgctaaaat 246  Q
    |||||||||||    
T  26942218 cttgctaaaat 26942208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 137 - 245
Target Start/End: Complemental strand, 3596662 - 3596555
Alignment:
Q  137 aaatttacacctcctagatattaactttattgctaagttgagattaacacagtcctcgtggatacgaacttattttattacttcgatagt-tttagtaca 235  Q
    ||||||| || ||||| ||||| || |||||||||| ||||||||||||||||| | ||||  ||||  |  ||||| |||||||||||| ||||||| |    
T  3596662 aaatttatacatcctaaatatttaccttattgctaaattgagattaacacagtctttgtgggaacga--tatttttactacttcgatagtatttagtaaa 3596565  T
Q  236 cttgctaaaa 245  Q
    ||||||||||    
T  3596564 cttgctaaaa 3596555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 174 - 226
Target Start/End: Complemental strand, 22561004 - 22560952
Alignment:
Q  174 ttgagattaacacagtcctcgtggatacgaacttattttattacttcgatagt 226  Q
    |||||||||||| |||||| ||||  |||| ||||||||||||||||||||||    
T  22561004 ttgagattaacagagtccttgtgggaacgatcttattttattacttcgatagt 22560952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 188 - 240
Target Start/End: Original strand, 27649282 - 27649333
Alignment:
Q  188 gtcctcgtggatacgaacttattttattacttcgatagttttagtacacttgc 240  Q
    |||||||||||| ||| ||||||| |||||||||||||||||||| |||||||    
T  27649282 gtcctcgtggattcgatcttattt-attacttcgatagttttagttcacttgc 27649333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 165 - 254
Target Start/End: Complemental strand, 28974227 - 28974136
Alignment:
Q  165 attgctaagttgagattaaca-cagtcctcgtggatacgaacttatt-ttattacttcgatagttttag-tacacttgctaaaatatctatca 254  Q
    ||||||||||||| ||||||| || |||||||||||||  | ||||| ||||||||||||||||||| | |||||||||  ||||||||||||    
T  28974227 attgctaagttgacattaacaacaatcctcgtggatacagatttattattattacttcgatagttttggatacacttgc-caaatatctatca 28974136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 210 - 254
Target Start/End: Original strand, 11248085 - 11248129
Alignment:
Q  210 tttattacttcgatagttttagtacacttgctaaaatatctatca 254  Q
    |||||||||| ||||||||||||||||||| |||||  |||||||    
T  11248085 tttattacttagatagttttagtacacttggtaaaaagtctatca 11248129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 174 - 244
Target Start/End: Complemental strand, 13021099 - 13021027
Alignment:
Q  174 ttgagattaacacagtcctcgtggatacgaactt-attttattacttcgatag-ttttagtacacttgctaaa 244  Q
    ||||||||||||| ||||||||||| || || || |||  ||||||||||| | |||||||||||||||||||    
T  13021099 ttgagattaacacggtcctcgtggaaacaaatttaattgcattacttcgatggtttttagtacacttgctaaa 13021027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 188 - 240
Target Start/End: Complemental strand, 19664730 - 19664679
Alignment:
Q  188 gtcctcgtggatacgaacttattttattacttcgatagttttagtacacttgc 240  Q
    |||||||||||||| || |||||| ||||||||||||||||| || |||||||    
T  19664730 gtcctcgtggatacaaatttattt-attacttcgatagttttggttcacttgc 19664679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0062 (Bit Score: 167; Significance: 3e-89; HSPs: 2)
Name: scaffold0062
Description:

Target: scaffold0062; HSP #1
Raw Score: 167; E-Value: 3e-89
Query Start/End: Original strand, 6 - 256
Target Start/End: Complemental strand, 67847 - 67598
Alignment:
Q  6 aataaagggaggtaaactactcgtataagacaatacgggattcatcggcttaatcattcttctcaaatcatctttcaaccaacttttacttacttttgtt 105  Q
    |||||||||||||||||| ||| ||||  |||||| ||||||||||||||||||||||| |||| ||||||||||||| ||||||| |||||||||||||    
T  67847 aataaagggaggtaaactgctcatatagaacaataggggattcatcggcttaatcattcatctccaatcatctttcaaacaactttcacttacttttgtt 67748  T
Q  106 acacttaaatctactgcctcagacacttataaaatttacacctcctagatattaactttattgctaagttgagattaacacagtcctcgtggatacgaac 205  Q
    ||||  ||| ||||||||| || ||||| |||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  67747 acacacaaacctactgccttaggcacttctaaaatttacacatcctagatattaactttattgccaagttgagattaacacagtcctcgtggatacgaac 67648  T
Q  206 ttattttattacttcgatagttttagtacacttgctaaaatatctatcata 256  Q
    ||||||||||||||| |||||||||||||||||| ||||| ||||||||||    
T  67647 ttattttattacttccatagttttagtacacttggtaaaa-atctatcata 67598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0062; HSP #2
Raw Score: 164; E-Value: 2e-87
Query Start/End: Original strand, 9 - 256
Target Start/End: Complemental strand, 52895 - 52649
Alignment:
Q  9 aaagggaggtaaactactcgtataagacaatacgggattcatcggcttaatcattcttctcaaatcatctttcaaccaacttttacttacttttgttaca 108  Q
    ||||||||||||||||||| ||||  |||||| ||||||||||||||||||||||| || | ||||||||||||| ||||||| ||||||||||||||||    
T  52895 aaagggaggtaaactactcatatagaacaataggggattcatcggcttaatcattcatcaccaatcatctttcaaacaactttcacttacttttgttaca 52796  T
Q  109 cttaaatctactgcctcagacacttataaaatttacacctcctagatattaactttattgctaagttgagattaacacagtcctcgtggatacgaactta 208  Q
    |  ||| ||||||||| || ||||| |||||||||||| |||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||    
T  52795 cacaaacctactgccttaggcacttctaaaatttacacatcctagatattaactttattgctaagttgaaattaacatagtcctcgtggatacgaactta 52696  T
Q  209 ttttattacttcgatagttttagtacacttgctaaaatatctatcata 256  Q
    |||||||||||||||||||||||| |||||||||||| ||||||||||    
T  52695 ttttattacttcgatagttttagtgcacttgctaaaa-atctatcata 52649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 167; Significance: 3e-89; HSPs: 62)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 167; E-Value: 3e-89
Query Start/End: Original strand, 1 - 255
Target Start/End: Original strand, 17670410 - 17670663
Alignment:
Q  1 ttaggaataaagggaggtaaactactcgtataagacaatacgggattcatcggcttaatcattcttctcaaatcatctttcaaccaacttttacttactt 100  Q
    |||| |||||||||||||||||||||| |||||  |||||  |||||||||||| ||||||| |||||| |||||||||||||| |||||||| ||||||    
T  17670410 ttagtaataaagggaggtaaactactcatataaagcaatagcggattcatcggcataatcatccttctcgaatcatctttcaac-aacttttatttactt 17670508  T
Q  101 ttgttacacttaaatctactgcctcagacacttataaaatttacacctcctagatattaactttattgctaagttgagattaacacagtcctcgtggata 200  Q
    ||  | |||  ||| |||||||||||| |||||| ||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  17670509 tttatgcacacaaacctactgcctcaggcacttacaaaatttacacatcctagatattaactttattgctaagttgagattaacatagtcctcgtggata 17670608  T
Q  201 cgaacttattttattacttcgatagttttagtacacttgctaaaatatctatcat 255  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17670609 cgaacttattttattacttcgatagttttagtacacttgctaaaatatctatcat 17670663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 161; E-Value: 1e-85
Query Start/End: Original strand, 1 - 245
Target Start/End: Original strand, 18859876 - 18860119
Alignment:
Q  1 ttaggaataaagggaggtaaactactcgtataagacaatacgggattcatcggcttaatcattcttctcaaatcatctttcaaccaacttttacttactt 100  Q
    ||||||||||| ||||||||||| ||| |||||  ||||| || |||||||||||||||||| |||||||||||||||| |||| |||||||| ||||||    
T  18859876 ttaggaataaaaggaggtaaacttctcatataaagcaatagggaattcatcggcttaatcatccttctcaaatcatcttccaac-aacttttatttactt 18859974  T
Q  101 ttgttacacttaaatctactgcctcagacacttataaaatttacacctcctagatattaactttattgctaagttgagattaacacagtcctcgtggata 200  Q
    ||  | |||  ||| |||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18859975 tttatgcacacaaacctactgcctcaggcacttataaaatttacacatcctagatattaactttattgctaagttgagattaacacagtcctcgtggata 18860074  T
Q  201 cgaacttattttattacttcgatagttttagtacacttgctaaaa 245  Q
    |||||||||||||||||||||||| ||||||||||||||||||||    
T  18860075 cgaacttattttattacttcgatatttttagtacacttgctaaaa 18860119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 113 - 246
Target Start/End: Complemental strand, 11702485 - 11702352
Alignment:
Q  113 aatctactgcctcagacacttataaaatttacacctcctagatattaactttattgctaagttgagattaacacagtcctcgtggatacgaacttatttt 212  Q
    ||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  11702485 aatctactgcctcaggcacttataaaatttacacatcctagatattaactttattgctaagttgagattaacacagtcttcgtggatacgaacttatttt 11702386  T
Q  213 attacttcgatagttttagtacacttgctaaaat 246  Q
    ||||||||||||||||||||||||||||||||||    
T  11702385 attacttcgatagttttagtacacttgctaaaat 11702352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 118; E-Value: 6e-60
Query Start/End: Original strand, 116 - 245
Target Start/End: Original strand, 10386156 - 10386285
Alignment:
Q  116 ctactgcctcagacacttataaaatttacacctcctagatattaactttattgctaagttgagattaacacagtcctcgtggatacgaacttattttatt 215  Q
    ||||||||||||| ||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10386156 ctactgcctcagaaacttataaaatttacacatcctaaatattaactttattgctaagttgagattaacacagtcctcgtggatacgaacttattttatt 10386255  T
Q  216 acttcgatagttttagtacacttgctaaaa 245  Q
    ||||||||||||||||||||||||||||||    
T  10386256 acttcgatagttttagtacacttgctaaaa 10386285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 116; E-Value: 9e-59
Query Start/End: Original strand, 117 - 248
Target Start/End: Original strand, 10248039 - 10248170
Alignment:
Q  117 tactgcctcagacacttataaaatttacacctcctagatattaactttattgctaagttgagattaacacagtcctcgtggatacgaacttattttatta 216  Q
    |||||||||| ||||||||||||||||||| ||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||    
T  10248039 tactgcctcatacacttataaaatttacacatcctagatattaactttattgctagtttgagattaacacagtcctcgtggatacgaacttattttatta 10248138  T
Q  217 cttcgatagttttagtacacttgctaaaatat 248  Q
    ||||||||||||||||||||||||||||||||    
T  10248139 cttcgatagttttagtacacttgctaaaatat 10248170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 137 - 245
Target Start/End: Original strand, 33927211 - 33927320
Alignment:
Q  137 aaatttacacctcctagatattaactttattgctaagttgagattaacacagtcctcgtggatacgaactt-attttattacttcgatagttttagtaca 235  Q
    |||||||||| |||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  33927211 aaatttacacatcctagatattaacgttattgctaaattgagattaacacagtcctcgtggatacgaacttaattttattacttcgatagttttagtaca 33927310  T
Q  236 cttgctaaaa 245  Q
    ||||||||||    
T  33927311 cttgctaaaa 33927320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 138 - 254
Target Start/End: Original strand, 12786362 - 12786480
Alignment:
Q  138 aatttacacctcctagatattaactttattgctaagttgagattaacacagtcctcgtggatacgaacttattttattacttcgat--agttttagtaca 235  Q
    |||||| || ||||| ||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||  | ||||||||||    
T  12786362 aatttatacatcctaaatattcactttattgctaaattgagattaacacagtcctcgtggatacgaacttattttattacttcgatacatttttagtaca 12786461  T
Q  236 cttgctaaaatatctatca 254  Q
    |||||||||||||||||||    
T  12786462 cttgctaaaatatctatca 12786480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 116 - 244
Target Start/End: Complemental strand, 15812041 - 15811909
Alignment:
Q  116 ctactgcctcagacacttata-aaatttacacctcctagatattaactttattgctaagttgagattaacacagtcctcgtggatacgaactt-atttta 213  Q
    |||||||||||| |||| | | |||||||||| |||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||| ||||||    
T  15812041 ctactgcctcaggcactaaaacaaatttacacttcctagatattaacgttattgctaaattgagattaacacagtcctcgtggatacgaacttaatttta 15811942  T
Q  214 ttacttcgat--agttttagtacacttgctaaa 244  Q
    ||||||||||  | |||||||||||||||||||    
T  15811941 ttacttcgatgcatttttagtacacttgctaaa 15811909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 137 - 254
Target Start/End: Original strand, 56199092 - 56199211
Alignment:
Q  137 aaatttacacctcctagatattaactttattgctaagttgagattaacacagtcctcgtggatacgaactt-attttattacttcgat--agttttagta 233  Q
    |||||||||| |||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||  | ||||||||    
T  56199092 aaatttacacatcctagatattaacgttattgctaaattgagattaacacagtcctcgtggatacgaacttaattttattacttcgatgcatttttagta 56199191  T
Q  234 cacttgctaaaatatctatca 254  Q
    |||||||||||| ||||||||    
T  56199192 cacttgctaaaa-atctatca 56199211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 138 - 254
Target Start/End: Original strand, 35510231 - 35510349
Alignment:
Q  138 aatttacacctcctagatattaactttattgctaagttgagattaacacagtcctcgtggatacgaacttattttattacttcgat--agttttagtaca 235  Q
    |||||| || ||||| ||||| ||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||| |||  | ||||||||||    
T  35510231 aatttatacatcctaaatattcactttattgctaaattgagattaacacagtcctcgtggatacgaatttattttattacttggatacatttttagtaca 35510330  T
Q  236 cttgctaaaatatctatca 254  Q
    |||||||||||||||||||    
T  35510331 cttgctaaaatatctatca 35510349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 148 - 254
Target Start/End: Complemental strand, 52006393 - 52006285
Alignment:
Q  148 tcctagatattaactttattgctaagttgagattaacacagtcctcgtggatacgaacttattttattacttcgat--agttttagtacacttgctaaaa 245  Q
    ||||| ||||| ||||||| ||||| |||||||||||||||||||||||||||| |||||||||||||||||||||  | ||||||||||||||||||||    
T  52006393 tcctaaatatttactttatcgctaaattgagattaacacagtcctcgtggatacaaacttattttattacttcgattcatttttagtacacttgctaaaa 52006294  T
Q  246 tatctatca 254  Q
    |||||||||    
T  52006293 tatctatca 52006285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 138 - 245
Target Start/End: Original strand, 3720600 - 3720709
Alignment:
Q  138 aatttacacctcctagatattaactttattgctaagttgagattaacacagtcctcgtggatacgaacttattttattacttcgat--agttttagtaca 235  Q
    |||||| || ||||| ||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||  | ||||||||||    
T  3720600 aatttatacatcctaaatatttactttattgctaaattgagattaacacagtcctcgtggatacgaacttattttattacttcgatacatttttagtaca 3720699  T
Q  236 cttgctaaaa 245  Q
     |||||||||    
T  3720700 tttgctaaaa 3720709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 138 - 245
Target Start/End: Original strand, 19820954 - 19821063
Alignment:
Q  138 aatttacacctcctagatattaactttattgctaagttgagattaacacagtcctcgtggatacgaacttattttattacttcgat--agttttagtaca 235  Q
    |||||| || ||||| ||||| ||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||  | ||||||||||    
T  19820954 aatttatacatcctaaatatttactttattgctaaattgagattaacacaatcctcgtggatacgaacttattttattacttcgatacatttttagtaca 19821053  T
Q  236 cttgctaaaa 245  Q
    ||||||||||    
T  19821054 cttgctaaaa 19821063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 137 - 254
Target Start/End: Original strand, 56195765 - 56195884
Alignment:
Q  137 aaatttacacctcctagatattaactttattgctaagttgagattaacacagtcctcgtggatacgaactt-attttattacttcgat--agttttagta 233  Q
    |||||||||| |||||||||||||| |||||||||| |||||||||||||| |||||||| |||||||||| ||||||||||||||||  | ||||||||    
T  56195765 aaatttacacatcctagatattaacgttattgctaaattgagattaacacaatcctcgtgaatacgaacttaattttattacttcgatgcatttttagta 56195864  T
Q  234 cacttgctaaaatatctatca 254  Q
    |||||||||||| ||||||||    
T  56195865 cacttgctaaaa-atctatca 56195884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 137 - 245
Target Start/End: Complemental strand, 15404965 - 15404854
Alignment:
Q  137 aaatttacacctcctagatattaactttattgctaagttgagattaacacagtcctcgtggatacgaactt-attttattacttcgat--agttttagta 233  Q
    |||||||||| |||||||||||||| |||||||||| ||||||||||||||||| |||||||||||||||| ||||||||||||||||  |  |||||||    
T  15404965 aaatttacacatcctagatattaacgttattgctaaattgagattaacacagtcgtcgtggatacgaacttaattttattacttcgatgcatatttagta 15404866  T
Q  234 cacttgctaaaa 245  Q
    ||||||||||||    
T  15404865 cacttgctaaaa 15404854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 116 - 245
Target Start/End: Complemental strand, 19859407 - 19859274
Alignment:
Q  116 ctactgcctcagacacttataaaatttacacctcctagatattaactttattgctaagttgagattaacacagtcctcgtggatacgaactt----attt 211  Q
    ||||||||||||||||| | | ||||||||| |||||||||||||| |||||||||| ||||||||||| ||||||   |||||||||||||    ||||    
T  19859407 ctactgcctcagacactaaaataatttacacatcctagatattaaccttattgctaaattgagattaactcagtccctttggatacgaacttataaattt 19859308  T
Q  212 tattacttcgatagttttagtacacttgctaaaa 245  Q
    ||||||||| |||||||||||||||||| |||||    
T  19859307 tattacttctatagttttagtacacttgttaaaa 19859274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 138 - 245
Target Start/End: Complemental strand, 3797697 - 3797587
Alignment:
Q  138 aatttacacctcctagatattaactttattgctaagttgagattaacacagtcctcgtggatacgaactt-attttattacttcgat--agttttagtac 234  Q
    |||||| || ||||| ||||| ||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||  | |||||||||    
T  3797697 aatttatacatcctaaatatttactttattgctaaattgagattaacacagtcctcgtggatacgaacttaattttattacttcgatgcatttttagtac 3797598  T
Q  235 acttgctaaaa 245  Q
    |||||||||||    
T  3797597 acttgctaaaa 3797587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 138 - 245
Target Start/End: Original strand, 19827661 - 19827770
Alignment:
Q  138 aatttacacctcctagatattaactttattgctaagttgagattaacacagtcctcgtggatacgaacttattttattacttc--gatagttttagtaca 235  Q
    |||||| || ||||| ||||| ||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||  || | ||||||||||    
T  19827661 aatttatacatcctaaatatttactttattgctaaattgagattaacacaatcctcgtggatacgaacttattttattacttcgagacatttttagtaca 19827760  T
Q  236 cttgctaaaa 245  Q
    ||||||||||    
T  19827761 cttgctaaaa 19827770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 154 - 245
Target Start/End: Complemental strand, 37103074 - 37102981
Alignment:
Q  154 atattaactttattgctaagttgagattaacacagtcctcgtggatacgaacttattttattacttcgat--agttttagtacacttgctaaaa 245  Q
    ||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||  | ||||||||||||||||||||    
T  37103074 atatttactttattgctaaattgagattaacacagtcctcgtggatacgaacttattttattactttgatgcatttttagtacacttgctaaaa 37102981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 154 - 253
Target Start/End: Complemental strand, 15445221 - 15445120
Alignment:
Q  154 atattaactttattgctaagttgagattaacacagtcctcgtggatacgaactta-ttttattacttcgatagt-tttagtacacttgctaaaatatcta 251  Q
    ||||| ||||||||||||| ||||||||||  ||||||||||||||||||||||| ||||| |||||||||||| |||||||||||||||||||||||||    
T  15445221 atatttactttattgctaaattgagattaaatcagtcctcgtggatacgaacttatttttactacttcgatagtatttagtacacttgctaaaatatcta 15445122  T
Q  252 tc 253  Q
    ||    
T  15445121 tc 15445120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 137 - 254
Target Start/End: Complemental strand, 34319800 - 34319684
Alignment:
Q  137 aaatttacacctcctagatattaactttattgctaagttgagattaacacagtcctcgtggatacgaacttattttattacttcgatagt-tttagtaca 235  Q
    |||||||||| ||||| |||||||| |||||||||| ||||||||||||||||||||||||  ||||  |  ||||| |||||||||||| |||||||||    
T  34319800 aaatttacacatcctaaatattaaccttattgctaaattgagattaacacagtcctcgtgggaacga--tatttttactacttcgatagtatttagtaca 34319703  T
Q  236 cttgctaaaatatctatca 254  Q
    |||||||||||||||||||    
T  34319702 cttgctaaaatatctatca 34319684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 138 - 245
Target Start/End: Original strand, 40795252 - 40795361
Alignment:
Q  138 aatttacacctcctagatattaactttattgctaagttgagattaacacagtcctcgtggatacgaacttattttattacttcgat--agttttagtaca 235  Q
    |||||| || ||||| ||||| ||||||||||||| ||||||||||||||||| |||||||||| |||| ||||||||||||||||  | ||||||||||    
T  40795252 aatttatacatcctaaatatttactttattgctaaattgagattaacacagtcttcgtggatacaaactaattttattacttcgatacatttttagtaca 40795351  T
Q  236 cttgctaaaa 245  Q
    ||||||||||    
T  40795352 cttgctaaaa 40795361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 116 - 246
Target Start/End: Complemental strand, 19864300 - 19864166
Alignment:
Q  116 ctactgcctcagacacttataaaatttacacctcctagatattaactttattgctaagttgagattaacacagtcctcgtggatacgaactt----attt 211  Q
    |||||||||| | |||| | | ||||||||| |||||||||||||| |||||||||| ||||||||||||| ||||   || ||||||||||    ||||    
T  19864300 ctactgcctctggcactaaaataatttacacatcctagatattaaccttattgctaaattgagattaacacggtccctctgaatacgaacttataaattt 19864201  T
Q  212 tattacttcgatagttttagtacacttgctaaaat 246  Q
    ||||||||||||||||||||||||||||| |||||    
T  19864200 tattacttcgatagttttagtacacttgcaaaaat 19864166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 116 - 254
Target Start/End: Original strand, 5673113 - 5673250
Alignment:
Q  116 ctactgcctcagacacttataaaatttacacctcctagatattaactttattgctaagttgagattaacacagtcctcgtggatacgaacttattttatt 215  Q
    |||||||||||| || | | | ||||||||| ||||| |||||||| |||||||||| ||||||||||||||||||||||||  ||||  |  ||||| |    
T  5673113 ctactgcctcaggcattaaaataatttacacatcctaaatattaaccttattgctaaattgagattaacacagtcctcgtgggaacga--tatttttact 5673210  T
Q  216 acttcgatagt-tttagtacacttgctaaaatatctatca 254  Q
    ||||||||| | ||||||||||||||||||||||||||||    
T  5673211 acttcgataatatttagtacacttgctaaaatatctatca 5673250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 154 - 245
Target Start/End: Original strand, 26060758 - 26060852
Alignment:
Q  154 atattaactttattgctaagttgagattaacacagtcctcgtggatacgaactta-ttttattacttcgat--agttttagtacacttgctaaaa 245  Q
    |||||||| |||||||||| |||||||||||| |||||||||||||||||||||| |||||||||||||||  | ||||||||||||||||||||    
T  26060758 atattaaccttattgctaacttgagattaacatagtcctcgtggatacgaacttatttttattacttcgatacatttttagtacacttgctaaaa 26060852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 138 - 253
Target Start/End: Original strand, 5681670 - 5681783
Alignment:
Q  138 aatttacacctcctagatattaactttattgctaagttgagattaacacagtcctcgtggatacgaacttattttattacttcgat--agttttagtaca 235  Q
    |||||| || ||||| ||||| |||||||||||    ||||||||| ||||||||||||||||| |||||||||||||||||||||  | ||||||||||    
T  5681670 aatttatacatcctaaatatttactttattgct----tgagattaatacagtcctcgtggatacaaacttattttattacttcgatgcatttttagtaca 5681765  T
Q  236 cttgctaaaatatctatc 253  Q
    |||||||||| |||||||    
T  5681766 cttgctaaaaaatctatc 5681783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 137 - 254
Target Start/End: Original strand, 29325062 - 29325178
Alignment:
Q  137 aaatttacacctcctagatattaactttattgctaagttgagattaacacagtcctcgtggatacgaacttattttattacttcgatagt-tttagtaca 235  Q
    |||||||||| |||||||||||||| |||||||||| ||||||||||||||||||||||||  ||||  |  ||||| |||||||||||| ||| |||||    
T  29325062 aaatttacacatcctagatattaacgttattgctaaattgagattaacacagtcctcgtgggaacga--tatttttactacttcgatagtatttggtaca 29325159  T
Q  236 cttgctaaaatatctatca 254  Q
    ||||| ||||||| |||||    
T  29325160 cttgccaaaatatttatca 29325178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 137 - 254
Target Start/End: Complemental strand, 52530816 - 52530700
Alignment:
Q  137 aaatttacacctcctagatattaactttattgctaagttgagattaacacagtcctcgtggatacgaacttattttattacttcgatagt-tttagtaca 235  Q
    |||||||||| || ||||||||||| |||||||||| ||||||||||||||||||||||||  ||||  |  ||||| |||||||||||| ||| ||||     
T  52530816 aaatttacacatcttagatattaacgttattgctaaattgagattaacacagtcctcgtgggaacga--tatttttactacttcgatagtatttggtacg 52530719  T
Q  236 cttgctaaaatatctatca 254  Q
    |||||||||||||||||||    
T  52530718 cttgctaaaatatctatca 52530700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 138 - 254
Target Start/End: Complemental strand, 15429728 - 15429610
Alignment:
Q  138 aatttacacctcctagatattaactttattgctaagttgagattaacacagtcctcgtggatacgaactta-ttttattacttcgatagt-tttagtaca 235  Q
    |||||| || ||||| ||||| ||||||||| ||| ||||||||||  ||||||||||||||||||||||| ||||| |||||||||||| |||| |||     
T  15429728 aatttatacatcctaaatatttactttattgataaattgagattaaatcagtcctcgtggatacgaacttatttttactacttcgatagtatttaatacg 15429629  T
Q  236 cttgctaaaatatctatca 254  Q
    ||||||||||| |||||||    
T  15429628 cttgctaaaatgtctatca 15429610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 138 - 254
Target Start/End: Complemental strand, 15436342 - 15436224
Alignment:
Q  138 aatttacacctcctagatattaactttattgctaagttgagattaacacagtcctcgtggatacgaactta-ttttattacttcgatagt-tttagtaca 235  Q
    |||||| || ||||| ||||| ||||||||| ||| ||||||||||  ||||||||||||||||||||||| ||||| |||||||||||| |||| |||     
T  15436342 aatttatacatcctaaatatttactttattgataaattgagattaaatcagtcctcgtggatacgaacttatttttactacttcgatagtatttaatacg 15436243  T
Q  236 cttgctaaaatatctatca 254  Q
    ||||||||||| |||||||    
T  15436242 cttgctaaaatgtctatca 15436224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 162 - 254
Target Start/End: Original strand, 18911770 - 18911861
Alignment:
Q  162 tttattgctaagttgagattaacacagtcctcgtggatacgaacttattttattacttcgatagt-tttagtacacttgctaaaatatctatca 254  Q
    ||||||||||| ||||||||||||||||||||||||| ||||  |  ||||| |||||||||||| ||||||||||||||||||||||||||||    
T  18911770 tttattgctaaattgagattaacacagtcctcgtggaaacga--tatttttactacttcgatagtatttagtacacttgctaaaatatctatca 18911861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 137 - 245
Target Start/End: Complemental strand, 44808838 - 44808731
Alignment:
Q  137 aaatttacacctcctagatattaactttattgctaagttgagattaacacagtcctcgtggatacgaacttattttattacttcgatagt-tttagtaca 235  Q
    |||||||||| ||||| |||||||| |||||||||| ||||||||||||||||||||||||  ||||  |  ||||| |||||||||||| |||||||||    
T  44808838 aaatttacacatcctaaatattaaccttattgctaaattgagattaacacagtcctcgtgggaacga--tatttttactacttcgatagtatttagtaca 44808741  T
Q  236 cttgctaaaa 245  Q
    ||||||||||    
T  44808740 cttgctaaaa 44808731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 116 - 254
Target Start/End: Complemental strand, 34017687 - 34017550
Alignment:
Q  116 ctactgcctcagacacttataaaatttacacctcctagatattaactttattgctaagttgagattaacacagtcctcgtggatacgaacttattttatt 215  Q
    |||||||||||| || | | | ||||||||| ||||| |||||||| |||||||||| |||||||||||||||| |||| ||  ||||  |  ||||| |    
T  34017687 ctactgcctcaggcattaaaataatttacacatcctaaatattaaccttattgctaaattgagattaacacagtgctcgcgggaacga--tatttttact 34017590  T
Q  216 acttcgatagt-tttagtacacttgctaaaatatctatca 254  Q
    ||||||||||| |||| |||||||||||||||||||||||    
T  34017589 acttcgatagtatttaatacacttgctaaaatatctatca 34017550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 116 - 245
Target Start/End: Original strand, 53094727 - 53094862
Alignment:
Q  116 ctactgcctcagacacttataaaatttacacctcctagatattaactttattgctaagttgagattaacacagtcctcgtggatacgaacttat----tt 211  Q
    |||||| |||||||||| | | ||||||||| ||||| ||||||||  ||||||||| ||||||||||||||||||  ||||||||||||||||    ||    
T  53094727 ctactgtctcagacactaaaataatttacacatcctatatattaaccatattgctaaattgagattaacacagtccctgtggatacgaacttataaagtt 53094826  T
Q  212 tattacttcgat--agttttagtacacttgctaaaa 245  Q
    ||||||||||||  | || || ||||||||||||||    
T  53094827 tattacttcgattcatttataatacacttgctaaaa 53094862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 138 - 254
Target Start/End: Complemental strand, 40902955 - 40902840
Alignment:
Q  138 aatttacacctcctagatattaactttattgctaagttgagattaacacagtcctcgtggatacgaacttattttattacttcgatagt-tttagtacac 236  Q
    |||||| || ||||| ||||| |||||||| |||| ||||||||||||||||||||||||  ||||  |  ||||| |||||||||||| ||||||||||    
T  40902955 aatttatacatcctaaatatttactttattactaaattgagattaacacagtcctcgtgggaacga--tatttttactacttcgatagtatttagtacac 40902858  T
Q  237 ttgctaaaatatctatca 254  Q
    |||||||||||| |||||    
T  40902857 ttgctaaaatatttatca 40902840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 154 - 254
Target Start/End: Original strand, 44165048 - 44165147
Alignment:
Q  154 atattaactttattgctaagttgagattaacacagtcctcgtggatacgaacttattttattacttcgatag--ttttagtacacttgctaaaatatcta 251  Q
    ||||| |||||||| |||| ||||||||||  ||||||||    |||||||||||||||||||||||||||   ||||||||||||||||||||||||||    
T  44165048 atatttactttattactaaattgagattaaatcagtcctca---atacgaacttattttattacttcgatacatttttagtacacttgctaaaatatcta 44165144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 116 - 254
Target Start/End: Original strand, 15432299 - 15432436
Alignment:
Q  116 ctactgcctcagacacttataaaatttacacctcctagatattaactttattgctaagttgagattaacacagtcctcgtggatacgaacttattttatt 215  Q
    |||||||||||| || | | | ||||||||| ||||| |||||||| |||||||||| ||||||||||||||||||||||||  ||||  |  |||||      
T  15432299 ctactgcctcaggcattaaaataatttacacatcctaaatattaaccttattgctaaattgagattaacacagtcctcgtgggaacga--tatttttaca 15432396  T
Q  216 acttcgatagt-tttagtacacttgctaaaatatctatca 254  Q
    ||||||||| | ||| ||||||||||||||| ||||||||    
T  15432397 acttcgataatattttgtacacttgctaaaaaatctatca 15432436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 137 - 197
Target Start/End: Original strand, 24150913 - 24150973
Alignment:
Q  137 aaatttacacctcctagatattaactttattgctaagttgagattaacacagtcctcgtgg 197  Q
    |||||||||| |||||||||||||| |||||||||| ||||||||||||||||||||||||    
T  24150913 aaatttacacatcctagatattaacgttattgctaaattgagattaacacagtcctcgtgg 24150973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 116 - 254
Target Start/End: Original strand, 27014480 - 27014617
Alignment:
Q  116 ctactgcctcagacacttataaaatttacacctcctagatattaactttattgctaagttgagattaacacagtcctcgtggatacgaacttattttatt 215  Q
    |||||||||||| |||| | | |||||| || ||||| ||||| |||||||| |||| ||||||||||||||||||||||||  ||||  |  ||||| |    
T  27014480 ctactgcctcaggcactaaaataatttatacatcctaaatatttactttatttctaaattgagattaacacagtcctcgtggtaacga--tatttttact 27014577  T
Q  216 acttcgatagt-tttagtacacttgctaaaatatctatca 254  Q
    |||||||| || |||||| |||||||||||| ||||||||    
T  27014578 acttcgatggtatttagtgcacttgctaaaaaatctatca 27014617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 137 - 255
Target Start/End: Complemental strand, 40616689 - 40616572
Alignment:
Q  137 aaatttacacctcctagatattaactttattgctaagttgagattaacacagtcctcgtggatacgaacttattttattacttcgatagt-tttagtaca 235  Q
    |||||||||| ||||| |||| ||| |||||||||| ||||||||||||||||||||||||  ||||  |  ||||| |||||||||||| ||| |||||    
T  40616689 aaatttacacatcctaaatatcaacgttattgctaaattgagattaacacagtcctcgtgggaacga--tatttttactacttcgatagtatttggtaca 40616592  T
Q  236 cttgctaaaatatctatcat 255  Q
    ||||| ||||||| ||||||    
T  40616591 cttgccaaaatatttatcat 40616572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 151 - 244
Target Start/End: Complemental strand, 5677285 - 5677192
Alignment:
Q  151 tagatattaactttattgctaagttgagattaacacagtcctcgtggatacgaactta-ttttattacttcgatagttttagtacacttgctaaa 244  Q
    ||||||||||| |||||||||| |||||||| ||||| ||||||||||||||||| || |||||||||||||||||  ||| ||| |||||||||    
T  5677285 tagatattaaccttattgctaaattgagatt-acacaatcctcgtggatacgaacatatttttattacttcgatagaattactactcttgctaaa 5677192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 138 - 254
Target Start/End: Original strand, 12238499 - 12238614
Alignment:
Q  138 aatttacacctcctagatattaactttattgctaagttgagattaacacagtcctcgtggatacgaacttattttattacttcgatagt-tttagtacac 236  Q
    |||||| || ||||| ||||| ||||||||||||| |||||||||| |||||| ||||||  ||||  |  ||||| ||||||||| || ||||||||||    
T  12238499 aatttatacatcctaaatatttactttattgctaaattgagattaatacagtcatcgtgggaacga--tatttttactacttcgatggtatttagtacac 12238596  T
Q  237 ttgctaaaatatctatca 254  Q
    ||||||||||||||||||    
T  12238597 ttgctaaaatatctatca 12238614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 138 - 245
Target Start/End: Complemental strand, 24044011 - 24043902
Alignment:
Q  138 aatttacacctcctagatattaactttattgctaagttgagattaacacagtcctcgtggatacgaacttattttattacttcgat--agttttagtaca 235  Q
    |||||| || ||||| ||||| ||||||||||||| |||||||||||||||||||  || |||| |||||||||||||||| | ||  | ||||||||||    
T  24044011 aatttatacatcctaaatatttactttattgctaaattgagattaacacagtccttatgaatacaaacttattttattactgcaatacatttttagtaca 24043912  T
Q  236 cttgctaaaa 245  Q
    ||| ||||||    
T  24043911 cttactaaaa 24043902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 10 - 106
Target Start/End: Complemental strand, 3719508 - 3719412
Alignment:
Q  10 aagggaggtaaactactcgtataagacaatacgggattcatcggcttaatcattcttctcaaatcatc-tttcaaccaacttttacttacttttgtta 106  Q
    |||||||||||  ||||| ||||  |||||| |||||||||||||||||||||||||||  ||||||| |||||| |||| |||||||||||||||||    
T  3719508 aagggaggtaat-tactcatatagaacaataggggattcatcggcttaatcattcttctttaatcatcttttcaaacaacctttacttacttttgtta 3719412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 116 - 197
Target Start/End: Original strand, 5670795 - 5670876
Alignment:
Q  116 ctactgcctcagacacttataaaatttacacctcctagatattaactttattgctaagttgagattaacacagtcctcgtgg 197  Q
    |||||||||||| || | | | ||||||||| ||||| |||||||| |||||||||| ||||||||||||||||||||||||    
T  5670795 ctactgcctcaggcattaaaataatttacacatcctaaatattaaccttattgctaaattgagattaacacagtcctcgtgg 5670876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 137 - 197
Target Start/End: Original strand, 5706633 - 5706693
Alignment:
Q  137 aaatttacacctcctagatattaactttattgctaagttgagattaacacagtcctcgtgg 197  Q
    |||||||||| || ||||||||||| |||||||||| ||||||||||||||||||||||||    
T  5706633 aaatttacacatcttagatattaaccttattgctaaattgagattaacacagtcctcgtgg 5706693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 10 - 109
Target Start/End: Original strand, 14702012 - 14702111
Alignment:
Q  10 aagggaggtaaactactcgtataagacaatacgggattcatcggcttaatcattcttctcaaatcatc-tttcaaccaacttttacttacttttgttaca 108  Q
    ||||||||||| |||||| || |  |||||| |||||||||||||||||||||||||||  ||||||| |||||| || ||||||||||| |||||||||    
T  14702012 aagggaggtaa-ctactcatacagaacaataggggattcatcggcttaatcattcttctttaatcatcttttcaaacaccttttacttacgtttgttaca 14702110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 174 - 255
Target Start/End: Complemental strand, 37739607 - 37739525
Alignment:
Q  174 ttgagattaacacagtcctcgtggatacgaactt-attttattacttcgatag-ttttagtacacttgctaaaatatctatcat 255  Q
    ||||||||||||| ||||||||||| |||||||| ||| |||||||||||||| ||||| |||||||||| |||||||||||||    
T  37739607 ttgagattaacacggtcctcgtggaaacgaacttaattgtattacttcgatagtttttaatacacttgct-aaatatctatcat 37739525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 163 - 224
Target Start/End: Complemental strand, 11649306 - 11649244
Alignment:
Q  163 ttattgctaagttgagattaacacagtcctcgtggatacgaactta-ttttattacttcgata 224  Q
    |||||||||| |||||||||||||||||||| |||||||||||||| |||||||| |||||||    
T  11649306 ttattgctaaattgagattaacacagtcctcatggatacgaacttatttttattatttcgata 11649244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 148 - 245
Target Start/End: Original strand, 48637757 - 48637853
Alignment:
Q  148 tcctagatattaactttattgctaagttgagattaacacagtcctcgtggatacgaacttattttattacttcgatagt-tttagtacacttgctaaaa 245  Q
    ||||| ||||| || |||||||||| ||| ||||||||||||||||||||  ||||  |  ||||| |||||||||||| |||||||||||||||||||    
T  48637757 tcctaaatatttaccttattgctaaattgggattaacacagtcctcgtgggaacga--tatttttactacttcgatagtatttagtacacttgctaaaa 48637853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 174 - 244
Target Start/End: Complemental strand, 48013235 - 48013163
Alignment:
Q  174 ttgagattaacacagtcctcgtggatacgaactt-attttattacttcgatag-ttttagtacacttgctaaa 244  Q
    |||| |||||||| ||||||||||| || ||||| ||| |||||||||||||| |||||||||||||||||||    
T  48013235 ttgaaattaacacggtcctcgtggaaacaaactttattatattacttcgatagtttttagtacacttgctaaa 48013163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 166 - 240
Target Start/End: Original strand, 15851450 - 15851524
Alignment:
Q  166 ttgctaagttgagattaaca-cagtcctcgtggatacgaacttattttattacttcgatagttttagtacacttgc 240  Q
    ||||||||| || ||||||| | |||||||||||||||||||| |  |||||||||||||||||| ||||||||||    
T  15851450 ttgctaagtagaaattaacaacggtcctcgtggatacgaactt-tactattacttcgatagttttggtacacttgc 15851524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 138 - 197
Target Start/End: Complemental strand, 38283361 - 38283302
Alignment:
Q  138 aatttacacctcctagatattaactttattgctaagttgagattaacacagtcctcgtgg 197  Q
    |||||| || ||||| ||||| |||||||| |||| ||||||||||||||||||||||||    
T  38283361 aatttatacatcctaaatatttactttatttctaaattgagattaacacagtcctcgtgg 38283302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 174 - 224
Target Start/End: Original strand, 1388144 - 1388194
Alignment:
Q  174 ttgagattaacacagtcctcgtggatacgaacttattttattacttcgata 224  Q
    ||||||||||||||||||| || || |||| ||||||||||||||||||||    
T  1388144 ttgagattaacacagtccttgttgaaacgatcttattttattacttcgata 1388194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 138 - 254
Target Start/End: Complemental strand, 48415397 - 48415278
Alignment:
Q  138 aatttacacctcctagatattaactttattgctaagttgagattaacacagtcctcgtggatacga-acttattttattacttcgata--gttttagtac 234  Q
    |||||| || ||||| ||||| |||| ||| |||| ||||||||||||||||||| |||   |||| | || ||||||||||||||||   |||||||||    
T  48415397 aatttatacatcctaaatatttactt-atttctaaattgagattaacacagtccttgtgagaacgatattttttttattacttcgatatgtttttagtac 48415299  T
Q  235 acttgct-aaaatatctatca 254  Q
    ||||||| |||||||||||||    
T  48415298 acttgctaaaaatatctatca 48415278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 138 - 224
Target Start/End: Complemental strand, 33408203 - 33408124
Alignment:
Q  138 aatttacacctcctagatattaactttattgctaagttgagattaacacagtcctcgtggatacgaacttattttattacttcgata 224  Q
    |||||| || ||||| ||||| ||||||||||||| |||||||||||||| |       ||||| ||||||||||||||||||||||    
T  33408203 aatttatacatcctaaatatttactttattgctaaattgagattaacacaat-------gatacaaacttattttattacttcgata 33408124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 42 - 80
Target Start/End: Original strand, 3734450 - 3734487
Alignment:
Q  42 gggattcatcggcttaatcattcttctcaaatcatcttt 80  Q
    |||||||||||||||||||||||||||| ||||||||||    
T  3734450 gggattcatcggcttaatcattcttctc-aatcatcttt 3734487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 185 - 245
Target Start/End: Complemental strand, 24605073 - 24605007
Alignment:
Q  185 acagtcctcgtggatacgaactt----attttattacttcg--atagttttagtacacttgctaaaa 245  Q
    |||||||| ||||||||||||||    ||||||||||||||  ||| ||||||||||||||||||||    
T  24605073 acagtccttgtggatacgaacttatagattttattacttcgatatatttttagtacacttgctaaaa 24605007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 42 - 80
Target Start/End: Complemental strand, 49636505 - 49636468
Alignment:
Q  42 gggattcatcggcttaatcattcttctcaaatcatcttt 80  Q
    |||||||||||||||||||||||||||| ||||||||||    
T  49636505 gggattcatcggcttaatcattcttctc-aatcatcttt 49636468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 42 - 80
Target Start/End: Complemental strand, 49639798 - 49639761
Alignment:
Q  42 gggattcatcggcttaatcattcttctcaaatcatcttt 80  Q
    |||||||||||||||||||||||||||| ||||||||||    
T  49639798 gggattcatcggcttaatcattcttctc-aatcatcttt 49639761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 209 - 254
Target Start/End: Original strand, 5820813 - 5820857
Alignment:
Q  209 ttttattacttcgatagttttagtacacttgctaaaatatctatca 254  Q
    |||||||||||||||| |||||||||||||| ||||| ||||||||    
T  5820813 ttttattacttcgataattttagtacacttgttaaaa-atctatca 5820857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 188 - 240
Target Start/End: Complemental strand, 26062754 - 26062703
Alignment:
Q  188 gtcctcgtggatacgaacttattttattacttcgatagttttagtacacttgc 240  Q
    ||||||||||||||||| ||| ||||||| |||||||||||| || |||||||    
T  26062754 gtcctcgtggatacgaattta-tttattatttcgatagttttggttcacttgc 26062703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 167; Significance: 3e-89; HSPs: 56)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 167; E-Value: 3e-89
Query Start/End: Original strand, 6 - 256
Target Start/End: Complemental strand, 15719290 - 15719041
Alignment:
Q  6 aataaagggaggtaaactactcgtataagacaatacgggattcatcggcttaatcattcttctcaaatcatctttcaaccaacttttacttacttttgtt 105  Q
    |||||||||||||||||| ||| ||||  |||||| ||||||||||||||||||||||| |||| ||||||||||||| ||||||| |||||||||||||    
T  15719290 aataaagggaggtaaactgctcatatagaacaataggggattcatcggcttaatcattcatctccaatcatctttcaaacaactttcacttacttttgtt 15719191  T
Q  106 acacttaaatctactgcctcagacacttataaaatttacacctcctagatattaactttattgctaagttgagattaacacagtcctcgtggatacgaac 205  Q
    ||||  ||| ||||||||| || ||||| |||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  15719190 acacacaaacctactgccttaggcacttctaaaatttacacatcctagatattaactttattgccaagttgagattaacacagtcctcgtggatacgaac 15719091  T
Q  206 ttattttattacttcgatagttttagtacacttgctaaaatatctatcata 256  Q
    ||||||||||||||| |||||||||||||||||| ||||| ||||||||||    
T  15719090 ttattttattacttccatagttttagtacacttggtaaaa-atctatcata 15719041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 164; E-Value: 2e-87
Query Start/End: Original strand, 9 - 256
Target Start/End: Complemental strand, 15703983 - 15703737
Alignment:
Q  9 aaagggaggtaaactactcgtataagacaatacgggattcatcggcttaatcattcttctcaaatcatctttcaaccaacttttacttacttttgttaca 108  Q
    ||||||||||||||||||| ||||  |||||| ||||||||||||||||||||||| || | ||||||||||||| ||||||| ||||||||||||||||    
T  15703983 aaagggaggtaaactactcatatagaacaataggggattcatcggcttaatcattcatcaccaatcatctttcaaacaactttcacttacttttgttaca 15703884  T
Q  109 cttaaatctactgcctcagacacttataaaatttacacctcctagatattaactttattgctaagttgagattaacacagtcctcgtggatacgaactta 208  Q
    |  ||| ||||||||| || ||||| |||||||||||| |||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||    
T  15703883 cacaaacctactgccttaggcacttctaaaatttacacatcctagatattaactttattgctaagttgaaattaacatagtcctcgtggatacgaactta 15703784  T
Q  209 ttttattacttcgatagttttagtacacttgctaaaatatctatcata 256  Q
    |||||||||||||||||||||||| |||||||||||| ||||||||||    
T  15703783 ttttattacttcgatagttttagtgcacttgctaaaa-atctatcata 15703737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 162; E-Value: 3e-86
Query Start/End: Original strand, 1 - 254
Target Start/End: Original strand, 11059897 - 11060148
Alignment:
Q  1 ttaggaataaagggaggtaaactactcgtataagacaatacgggattcatcggcttaatcattcttctcaaatcatctttcaaccaacttttacttactt 100  Q
    ||||||||||||||||||||||| ||| |||||  ||||| |||||||||||| |||||||| ||| ||||||||||||||||| |||||||| || |||    
T  11059897 ttaggaataaagggaggtaaacttctcatataaagcaataggggattcatcggtttaatcatccttttcaaatcatctttcaac-aactttta-ttgctt 11059994  T
Q  101 ttgttacacttaaatctactgcctcagacacttataaaatttacacctcctagatattaactttattgctaagttgagattaacacagtcctcgtggata 200  Q
    ||  | |||  ||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  11059995 tttatgcacacaaacctactgcctcagacacttataaaatttacacatcctagatattaactttattgctaagttgagattaacacagttctcgtggata 11060094  T
Q  201 cgaacttattttattacttcgatagttttagtacacttgctaaaatatctatca 254  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||| |||||    
T  11060095 cgaacttattttattacttcgatagttttagtacatttgctaaaatatttatca 11060148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 161; E-Value: 1e-85
Query Start/End: Original strand, 1 - 245
Target Start/End: Original strand, 13518401 - 13518643
Alignment:
Q  1 ttaggaataaagggaggtaaactactcgtataagacaatacgggattcatcggcttaatcattcttctcaaatcatctttcaaccaacttttacttactt 100  Q
    ||||||||||||||||||||||| ||| |||||  |||||  ||||||||||| |||||||| ||| ||||||||||||||||| |||||||| ||||||    
T  13518401 ttaggaataaagggaggtaaacttctcatataaagcaatagaggattcatcggtttaatcatccttttcaaatcatctttcaac-aactttta-ttactt 13518498  T
Q  101 ttgttacacttaaatctactgcctcagacacttataaaatttacacctcctagatattaactttattgctaagttgagattaacacagtcctcgtggata 200  Q
    ||  | |||  ||| ||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13518499 tttatgcacacaaacctactgcctcaaacacttataaaatttacacatcctagatattaactttattgctaagttgagattaacacagtcctcgtggata 13518598  T
Q  201 cgaacttattttattacttcgatagttttagtacacttgctaaaa 245  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  13518599 cgaacttattttattacttcgatagttttagtacacttgctaaaa 13518643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 126; E-Value: 1e-64
Query Start/End: Original strand, 113 - 246
Target Start/End: Complemental strand, 1503331 - 1503198
Alignment:
Q  113 aatctactgcctcagacacttataaaatttacacctcctagatattaactttattgctaagttgagattaacacagtcctcgtggatacgaacttatttt 212  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  1503331 aatctactgcctcagacacttataaaatttacacatcctagatattaactttattgctaagttgagattaacacagtcctcgtggatacgaatttatttt 1503232  T
Q  213 attacttcgatagttttagtacacttgctaaaat 246  Q
    ||||||||||||||||||||||||||||||||||    
T  1503231 attacttcgatagttttagtacacttgctaaaat 1503198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 126; E-Value: 1e-64
Query Start/End: Original strand, 113 - 246
Target Start/End: Complemental strand, 1506535 - 1506402
Alignment:
Q  113 aatctactgcctcagacacttataaaatttacacctcctagatattaactttattgctaagttgagattaacacagtcctcgtggatacgaacttatttt 212  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  1506535 aatctactgcctcagacacttataaaatttacacatcctagatattaactttattgctaagttgagattaacacagtcctcgtggatacgaatttatttt 1506436  T
Q  213 attacttcgatagttttagtacacttgctaaaat 246  Q
    ||||||||||||||||||||||||||||||||||    
T  1506435 attacttcgatagttttagtacacttgctaaaat 1506402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 1 - 172
Target Start/End: Original strand, 11056439 - 11056608
Alignment:
Q  1 ttaggaataaagggaggtaaactactcgtataagacaatacgggattcatcggcttaatcattcttctcaaatcatctttcaaccaacttttacttactt 100  Q
    ||||||||||||||||||||||| ||| |||||  ||||| |||||||||||| |||||||| ||| |||||||||||||||| ||||||||| ||||||    
T  11056439 ttaggaataaagggaggtaaacttctcatataaagcaataggggattcatcggtttaatcatccttttcaaatcatctttcaa-caactttta-ttactt 11056536  T
Q  101 ttgttacacttaaatctactgcctcagacacttataaaatttacacctcctagatattaactttattgctaa 172  Q
    ||  | |||  ||| |||||||||||| |||||||||||||||||| |||||||||||||||||||||||||    
T  11056537 tttatgcacacaaacctactgcctcaggcacttataaaatttacacatcctagatattaactttattgctaa 11056608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 1 - 123
Target Start/End: Original strand, 18012040 - 18012162
Alignment:
Q  1 ttaggaataaagggaggtaaactactcgtataagacaatacgggattcatcggcttaatcattcttctcaaatcatctttcaaccaacttttacttactt 100  Q
    ||||||||||||||||||||||||||| |||||  |||||  |||||||||||||||||||||| |||| ||||||||||| | ||||||||||||||||    
T  18012040 ttaggaataaagggaggtaaactactcatataaaccaatagcggattcatcggcttaatcattcatctccaatcatctttcgaacaacttttacttactt 18012139  T
Q  101 ttgttacacttaaatctactgcc 123  Q
    |||||||||| ||||||||||||    
T  18012140 ttgttacactcaaatctactgcc 18012162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 116 - 254
Target Start/End: Complemental strand, 36808348 - 36808208
Alignment:
Q  116 ctactgcctcagacacttataaaatttacacctcctagatattaactttattgctaagttgagattaacacagtcctcgtggatacgaactt-attttat 214  Q
    |||||||||||  |||||||||||||||||| |||||||||||||| |||||||||| |||||||||| ||||||||||||||||||||||| |||||||    
T  36808348 ctactgcctcaatcacttataaaatttacacatcctagatattaaccttattgctaaattgagattaatacagtcctcgtggatacgaacttaattttat 36808249  T
Q  215 tacttcg--atagttttagtacacttgctaaaatatctatca 254  Q
    |||||||  ||||||| | |||||||||||||| ||||||||    
T  36808248 tacttcgatatagtttaaatacacttgctaaaa-atctatca 36808208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 118 - 244
Target Start/End: Original strand, 3252534 - 3252658
Alignment:
Q  118 actgcctcagacacttataaaatttacacctcctagatattaactttattgctaagttgagattaacacagtcctcgtggatacgaacttattttattac 217  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||| |||||||| || ||    |||||||||    
T  3252534 actgcctcagacacttataaaatttacacatcctagatattaactttattgctatgttgagattaacacagttctcgtggaaacaaa---tttttattac 3252630  T
Q  218 ttcgatag-ttttagtacacttgctaaa 244  Q
    |||||||| |||||||||||||||||||    
T  3252631 ttcgatagtttttagtacacttgctaaa 3252658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 148 - 254
Target Start/End: Complemental strand, 25820716 - 25820608
Alignment:
Q  148 tcctagatattaactttattgctaagttgagattaacacagtcctcgtggatacgaacttattttattacttcgat--agttttagtacacttgctaaaa 245  Q
    ||||| ||||| ||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||  | ||||||||||||||||||||    
T  25820716 tcctaaatatttactttattgctaaattgaaattaacacagtcctcgtggatacgaacttattttattacttcgatgcatttttagtacacttgctaaaa 25820617  T
Q  246 tatctatca 254  Q
    |||||||||    
T  25820616 tatctatca 25820608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 138 - 246
Target Start/End: Original strand, 43723932 - 43724042
Alignment:
Q  138 aatttacacctcctagatattaactttattgctaagttgagattaacacagtcctcgtggatacgaacttattttattacttcg--atagttttagtaca 235  Q
    |||||| || ||||| ||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||  ||| ||||||||||    
T  43723932 aatttatacatcctaaatatttactttattgctaaattgagattaacacagtcctcgtggatacgaacttattttattacttcgatatatttttagtaca 43724031  T
Q  236 cttgctaaaat 246  Q
    |||||||||||    
T  43724032 cttgctaaaat 43724042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 137 - 254
Target Start/End: Original strand, 45457383 - 45457502
Alignment:
Q  137 aaatttacacctcctagatattaactttattgctaagttgagattaacacagtcctcgtggatacgaactt-attttattacttcgat--agttttagta 233  Q
    |||||||||| |||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||  |  |||||||    
T  45457383 aaatttacacatcctagatattaacgttattgctaaattgagattaacacagtcctcgtggatacgaacttaattttattacttcgatgcatatttagta 45457482  T
Q  234 cacttgctaaaatatctatca 254  Q
    |||||||||||| ||||||||    
T  45457483 cacttgctaaaa-atctatca 45457502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 138 - 254
Target Start/End: Complemental strand, 25138810 - 25138692
Alignment:
Q  138 aatttacacctcctagatattaactttattgctaagttgagattaacacagtcctcgtggatacgaacttattttattacttcg--atagttttagtaca 235  Q
    |||||| || |||||  |||| ||||||||||||| |||||||||||||| | |||||||||||||||||||||||||||||||  ||| ||||||||||    
T  25138810 aatttatacatcctaagtatttactttattgctaaattgagattaacacatttctcgtggatacgaacttattttattacttcgatatatttttagtaca 25138711  T
Q  236 cttgctaaaatatctatca 254  Q
    |||||||||||||||||||    
T  25138710 cttgctaaaatatctatca 25138692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 138 - 245
Target Start/End: Original strand, 15470690 - 15470799
Alignment:
Q  138 aatttacacctcctagatattaactttattgctaagttgagattaacacagtcctcgtggatacgaacttattttattacttcgat--agttttagtaca 235  Q
    ||||||||| ||||| |||||||| |||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||  | |||||||||     
T  15470690 aatttacacatcctaaatattaaccttattgctaaattgaaattaacacagtcctcgtggatacgaacttattttattacttcgatacatttttagtacc 15470789  T
Q  236 cttgctaaaa 245  Q
    ||||||||||    
T  15470790 cttgctaaaa 15470799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 116 - 245
Target Start/End: Original strand, 45454073 - 45454206
Alignment:
Q  116 ctactgcctcagacacttata-aaatttacacctcctagatattaactttattgctaagttgagattaacacagtcctcgtggatacgaactt-atttta 213  Q
    |||||||||||| |||| | | |||||||||| |||||||||||||| |||||||||| |||||||||||||||||||||||||||| ||||| ||||||    
T  45454073 ctactgcctcaggcactaaaacaaatttacacatcctagatattaacgttattgctaaattgagattaacacagtcctcgtggatacaaacttaatttta 45454172  T
Q  214 ttacttcgat--agttttagtacacttgctaaaa 245  Q
    ||||||||||  |  |||||||||||||||||||    
T  45454173 ttacttcgatgcatatttagtacacttgctaaaa 45454206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 137 - 245
Target Start/End: Complemental strand, 31427425 - 31427314
Alignment:
Q  137 aaatttacacctcctagatattaactttattgctaagttgagattaacacagtcctcgtggatacgaactt-attttattacttcgat--agttttagta 233  Q
    |||||||||| ||||| |||||||| |||||||||| ||||||||||||||||| |||||||||||||||| ||||||||||||||||  | ||||||||    
T  31427425 aaatttacacatcctaaatattaaccttattgctaaattgagattaacacagtcttcgtggatacgaacttaattttattacttcgatgcatttttagta 31427326  T
Q  234 cacttgctaaaa 245  Q
    ||||||||||||    
T  31427325 cacttgctaaaa 31427314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 138 - 254
Target Start/End: Original strand, 26366146 - 26366264
Alignment:
Q  138 aatttacacctcctagatattaactttattgctaagttgagattaacacagtcctcgtggatacgaacttattttattacttcgat--agttttagtaca 235  Q
    |||||| || ||||| ||||| ||||||||||  | ||||||||||||||||||||||||||||||||||||||||||||||||||  | ||||||||||    
T  26366146 aatttatacatcctaaatatttactttattgccgaattgagattaacacagtcctcgtggatacgaacttattttattacttcgatgcatttttagtaca 26366245  T
Q  236 cttgctaaaatatctatca 254  Q
    ||| ||||| |||||||||    
T  26366246 cttactaaagtatctatca 26366264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 138 - 245
Target Start/End: Complemental strand, 13971784 - 13971675
Alignment:
Q  138 aatttacacctcctagatattaactttattgctaagttgagattaacacagtcctcgtggatacgaacttattttattacttcgat--agttttagtaca 235  Q
    |||||| || ||||| ||||| ||||||||||||| |||||||||||| ||||||||||||||| |||||||||||||||||||||  | ||||||||||    
T  13971784 aatttatacatcctaaatattcactttattgctaaattgagattaacaaagtcctcgtggataccaacttattttattacttcgatgcatttttagtaca 13971685  T
Q  236 cttgctaaaa 245  Q
    ||||||||||    
T  13971684 cttgctaaaa 13971675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 148 - 245
Target Start/End: Original strand, 6827013 - 6827112
Alignment:
Q  148 tcctagatattaactttattgctaagttgagattaacacagtcctcgtggatacgaacttattttattacttcgat--agttttagtacacttgctaaaa 245  Q
    ||||| ||||| ||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||| |||  | ||||||||||||||||||||    
T  6827013 tcctaaatatttactttattgctaaattgagattaacacagtcctcgtggatatgaacttattttattactttgatgcaattttagtacacttgctaaaa 6827112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 154 - 255
Target Start/End: Original strand, 13137136 - 13137238
Alignment:
Q  154 atattaactttattgctaagttgagattaacacagtcctcgtggatacgaacttattttattacttcgat--agttttagtacacttgctaaaatatcta 251  Q
    ||||| ||||||||||||| |||||||||| |||||||||||||||||||||||||||||||| ||||||  | |||||||||||||||||||| |||||    
T  13137136 atatttactttattgctaaattgagattaagacagtcctcgtggatacgaacttattttattatttcgatgcatttttagtacacttgctaaaa-atcta 13137234  T
Q  252 tcat 255  Q
    ||||    
T  13137235 tcat 13137238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 137 - 254
Target Start/End: Original strand, 8888857 - 8888973
Alignment:
Q  137 aaatttacacctcctagatattaactttattgctaagttgagattaacacagtcctcgtggatacgaacttattttattacttcgatagt-tttagtaca 235  Q
    |||||||||| ||||| |||||||| |||||||||| ||||||||||||||||||||||||  ||||  |  ||||| |||||||||||| |||||||||    
T  8888857 aaatttacacatcctaaatattaaccttattgctaaattgagattaacacagtcctcgtgggaacga--tatttttactacttcgatagtatttagtaca 8888954  T
Q  236 cttgctaaaatatctatca 254  Q
    |||||||||||||||||||    
T  8888955 cttgctaaaatatctatca 8888973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 137 - 254
Target Start/End: Original strand, 33310887 - 33311003
Alignment:
Q  137 aaatttacacctcctagatattaactttattgctaagttgagattaacacagtcctcgtggatacgaacttattttattacttcgatagt-tttagtaca 235  Q
    |||||||||| |||||||||||||| |||||||||| ||||||||||||||||||||||||  ||||  |  ||||| |||||||||||| ||| |||||    
T  33310887 aaatttacacatcctagatattaacgttattgctaaattgagattaacacagtcctcgtgggaacga--tatttttactacttcgatagtatttggtaca 33310984  T
Q  236 cttgctaaaatatctatca 254  Q
    ||||| |||||||||||||    
T  33310985 cttgccaaaatatctatca 33311003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 116 - 252
Target Start/End: Original strand, 25874381 - 25874516
Alignment:
Q  116 ctactgcctcagacacttataaaatttacacctcctagatattaactttattgctaagttgagattaacacagtcctcgtggatacgaacttattttatt 215  Q
    ||||||||||||||| | | | ||||||||| ||||| |||||||| |||||||||| ||||||||||||||||||||||||  ||  | |  ||||| |    
T  25874381 ctactgcctcagacattaaaataatttacacatcctaaatattaaccttattgctaaattgagattaacacagtcctcgtgggaac--aatatttttact 25874478  T
Q  216 acttcgatagt-tttagtacacttgctaaaatatctat 252  Q
    ||||||||||| |||||||||||||||||| |||||||    
T  25874479 acttcgatagtatttagtacacttgctaaattatctat 25874516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 116 - 245
Target Start/End: Original strand, 34682897 - 34683027
Alignment:
Q  116 ctactgcctcagacacttataaaatttacacctcctagatattaactttattgctaagttgagattaacacagtcctcgtggatacgaactta-ttttat 214  Q
    ||||||||||||||||| | | ||||||  | ||||||||||||||  ||||||||| ||||||||| || |||||||||||||||||||||| ||||||    
T  34682897 ctactgcctcagacactaaaataatttattcatcctagatattaacactattgctaaattgagattaccatagtcctcgtggatacgaacttatttttat 34682996  T
Q  215 tacttcgatagttttagtacacttgctaaaa 245  Q
    || ||| ||||  |||||||||||| |||||    
T  34682997 tatttctatagaattagtacacttgttaaaa 34683027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 116 - 243
Target Start/End: Original strand, 29440695 - 29440821
Alignment:
Q  116 ctactgcctcagacacttataaaatttacacctcctagatattaactttattgctaagttgagattaacacagtcctcgtggatacgaacttattttatt 215  Q
    |||||||||||| || | | | ||||||||| ||||| |||||||| |||||||||| ||||||||||||||||||||||||| ||||  |  ||||| |    
T  29440695 ctactgcctcaggcattaaaataatttacacatcctaaatattaaccttattgctaaattgagattaacacagtcctcgtggaaacga--tatttttact 29440792  T
Q  216 acttcgatagt-tttagtacacttgctaa 243  Q
    ||||||||||| |||||||||||||||||    
T  29440793 acttcgatagtatttagtacacttgctaa 29440821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 116 - 254
Target Start/End: Original strand, 25870984 - 25871121
Alignment:
Q  116 ctactgcctcagacacttataaaatttacacctcctagatattaactttattgctaagttgagattaacacagtcctcgtggatacgaacttattttatt 215  Q
    |||||||||||| || | | | ||||||||| ||||| |||||||| |||||||||| |||||||||||||||||||||| |  ||||  |  ||||| |    
T  25870984 ctactgcctcaggcattaaaataatttacacatcctaaatattaaccttattgctaaattgagattaacacagtcctcgtaggaacga--tatttttact 25871081  T
Q  216 acttcgatagt-tttagtacacttgctaaaatatctatca 254  Q
    ||||||||||| |||||||||||||||||| |||||||||    
T  25871082 acttcgatagtatttagtacacttgctaaattatctatca 25871121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 116 - 254
Target Start/End: Complemental strand, 25959594 - 25959457
Alignment:
Q  116 ctactgcctcagacacttataaaatttacacctcctagatattaactttattgctaagttgagattaacacagtcctcgtggatacgaacttattttatt 215  Q
    |||||||||||  |||| | | ||||||||| ||||| || ||||| |||||||||| ||||||||||||||||| ||||||  ||||  |  ||||| |    
T  25959594 ctactgcctcaagcactaaaataatttacacatcctaaatgttaaccttattgctaaattgagattaacacagtcatcgtgggaacga--tatttttact 25959497  T
Q  216 acttcgatagt-tttagtacacttgctaaaatatctatca 254  Q
    ||||||||||| ||||||||||||||||||||||||||||    
T  25959496 acttcgatagtatttagtacacttgctaaaatatctatca 25959457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 116 - 245
Target Start/End: Complemental strand, 45499263 - 45499135
Alignment:
Q  116 ctactgcctcagacacttataaaatttacacctcctagatattaactttattgctaagttgagattaacacagtcctcgtggatacgaacttattttatt 215  Q
    |||||||||||| || | | | ||||||||| ||||| |||||||| |||||||||| ||||||||||||||||||||||||  ||||  |  ||||| |    
T  45499263 ctactgcctcaggcattaaaataatttacacatcctaaatattaaccttattgctaaattgagattaacacagtcctcgtgggaacga--tatttttact 45499166  T
Q  216 acttcgatagt-tttagtacacttgctaaaa 245  Q
    ||||||||||| |||||||||||||||||||    
T  45499165 acttcgatagtatttagtacacttgctaaaa 45499135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 138 - 245
Target Start/End: Original strand, 5666750 - 5666858
Alignment:
Q  138 aatttacacctcctagatattaactttattgctaagttgagattaacacagtcctcgtggatacgaacttattttattacttcg--atagttttagtaca 235  Q
    |||||| || ||||| |||||| |||||||||||| ||||||| ||| |||||||||| |||||||||||||||||||||||||  ||| ||||| ||||    
T  5666750 aatttatacatcctaaatatta-ctttattgctaaattgagatcaacgcagtcctcgtagatacgaacttattttattacttcgatatatttttaataca 5666848  T
Q  236 cttgctaaaa 245  Q
    ||||||||||    
T  5666849 cttgctaaaa 5666858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 116 - 254
Target Start/End: Complemental strand, 30274674 - 30274536
Alignment:
Q  116 ctactgcctcagacacttata-aaatttacacctcctagatattaactttattgctaagttgagattaacacagtcctcgtggatacgaacttattttat 214  Q
    |||||||||||| |||| | | ||||||| || ||||| ||||| || |||||||||| |||||||||||||||||||| |||  ||||  |  |||||     
T  30274674 ctactgcctcagtcactaaaagaaatttatacatcctatatatttacgttattgctaaattgagattaacacagtcctcatgggaacga--tatttttac 30274577  T
Q  215 tacttcgatagt-tttagtacacttgctaaaatatctatca 254  Q
    |||||||||||| ||||||||||||||||||||||||||||    
T  30274576 tacttcgatagtatttagtacacttgctaaaatatctatca 30274536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 117 - 254
Target Start/End: Complemental strand, 37279580 - 37279445
Alignment:
Q  117 tactgcctcagacacttataaaatttacacctcctagatattaactttattgctaagttgagattaacacagtcctcgtggatacgaacttattttatta 216  Q
    ||||||||||| |||| | | ||||||||| ||||| ||||||||||||||||| | ||||||||||||||||||||||||  ||||  |  ||||| ||    
T  37279580 tactgcctcaggcactaaaataatttacacatcctaaatattaactttattgctgaattgagattaacacagtcctcgtgggaacga--tatttttacta 37279483  T
Q  217 cttcgatagtt-ttagtacacttgctaaaatatctatca 254  Q
    ||||||||||| || |||||||||| |||| ||||||||    
T  37279482 cttcgatagttattggtacacttgccaaaa-atctatca 37279445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 116 - 197
Target Start/End: Complemental strand, 9185329 - 9185248
Alignment:
Q  116 ctactgcctcagacacttataaaatttacacctcctagatattaactttattgctaagttgagattaacacagtcctcgtgg 197  Q
    |||||||||||| |||| | | ||||||||| ||||| ||||||||||||||||| | ||||||||||||||||||||||||    
T  9185329 ctactgcctcaggcactaaaataatttacacatcctaaatattaactttattgctgaattgagattaacacagtcctcgtgg 9185248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 138 - 245
Target Start/End: Original strand, 24238594 - 24238700
Alignment:
Q  138 aatttacacctcctagatattaactttattgctaagttgagattaacacagtcctcgtggatacgaacttattttattacttcgatagt-tttagtacac 236  Q
    ||||||||| |||||  ||||||| |||||||||| ||||||||||||||||||||||||  ||||  |  ||||| |||||||||||| ||||||||||    
T  24238594 aatttacacatcctaagtattaaccttattgctaaattgagattaacacagtcctcgtgggaacga--tatttttactacttcgatagtatttagtacac 24238691  T
Q  237 ttgctaaaa 245  Q
    |||||||||    
T  24238692 ttgctaaaa 24238700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 10 - 83
Target Start/End: Original strand, 29435856 - 29435929
Alignment:
Q  10 aagggaggtaaactactcgtataagacaatacgggattcatcggcttaatcattcttctcaaatcatctttcaa 83  Q
    |||||||||||||||||| ||||  |||||| ||||||||||||||||||||||| |||| |||||||||||||    
T  29435856 aagggaggtaaactactcatatagaacaataggggattcatcggcttaatcattcatctccaatcatctttcaa 29435929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 163 - 245
Target Start/End: Complemental strand, 38460674 - 38460590
Alignment:
Q  163 ttattgctaagttgagattaacacagtcctcgtggatacgaacttattttattacttcga--tagttttagtacacttgctaaaa 245  Q
    |||||| || ||||||||||||||||||||||| ||||| ||||||||||| ||||||||  || ||||||||||||||||||||    
T  38460674 ttattgatatgttgagattaacacagtcctcgtagatacaaacttattttactacttcgatgtatttttagtacacttgctaaaa 38460590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 137 - 197
Target Start/End: Original strand, 38015739 - 38015799
Alignment:
Q  137 aaatttacacctcctagatattaactttattgctaagttgagattaacacagtcctcgtgg 197  Q
    |||||||||| |||||||||||||| |||||||||| ||||||||||||||||||||||||    
T  38015739 aaatttacacatcctagatattaacgttattgctaaattgagattaacacagtcctcgtgg 38015799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 137 - 254
Target Start/End: Complemental strand, 11347778 - 11347662
Alignment:
Q  137 aaatttacacctcctagatattaactttattgctaagttgagattaacacagtcctcgtggatacgaacttattttattacttcgatagt-tttagtaca 235  Q
    ||||||| || |||||  |||| || |||||||||| ||||||||||||||||||||||||  ||||  |  ||||| ||||| |||||| |||||||||    
T  11347778 aaatttatacatcctaattatttaccttattgctaaattgagattaacacagtcctcgtgggaacga--tatttttactactttgatagtatttagtaca 11347681  T
Q  236 cttgctaaaatatctatca 254  Q
    |||||||||||||||||||    
T  11347680 cttgctaaaatatctatca 11347662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 10 - 106
Target Start/End: Original strand, 22592620 - 22592715
Alignment:
Q  10 aagggaggtaaactactcgtataagacaatacgggattcatcggcttaatcattcttctcaaatcatctttcaaccaacttttacttacttttgtta 106  Q
    |||||||||||  ||||| ||||  |||||| ||||||||||||||||||||| |||||  ||||||||||||| |||| |||| ||||||||||||    
T  22592620 aagggaggtaat-tactcatatagaacaataggggattcatcggcttaatcatccttctttaatcatctttcaaacaacctttaattacttttgtta 22592715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 138 - 254
Target Start/End: Original strand, 40781704 - 40781822
Alignment:
Q  138 aatttacacctcctagatattaactttattgctaagttgagattaacacagtcctcgtggatacgaacttattttattacttcgata--gttttagtaca 235  Q
    |||||| || ||||| ||||| |||||||| |||| ||||||||||||||||||| ||||  ||||  || ||||||||||||||||   ||||||||||    
T  40781704 aatttatacatcctaaatatttactttatttctaaattgagattaacacagtccttgtgggaacgatatt-ttttattacttcgatacgtttttagtaca 40781802  T
Q  236 cttgct-aaaatatctatca 254  Q
    |||||| |||||||||||||    
T  40781803 cttgctaaaaatatctatca 40781822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 116 - 245
Target Start/End: Complemental strand, 9188557 - 9188429
Alignment:
Q  116 ctactgcctcagacacttataaaatttacacctcctagatattaactttattgctaagttgagattaacacagtcctcgtggatacgaacttattttatt 215  Q
    |||||||||||| |||| | | ||||||||| ||||| |||||||| |||||||| | |||||||||||||||| |||||||  ||||  |  ||||| |    
T  9188557 ctactgcctcaggcactaaaataatttacacatcctaaatattaaccttattgctgaattgagattaacacagtactcgtgggaacga--tatttttact 9188460  T
Q  216 acttcgatagt-tttagtacacttgctaaaa 245  Q
    ||||||||||| ||| |||||||||| ||||    
T  9188459 acttcgatagtatttggtacacttgccaaaa 9188429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 116 - 245
Target Start/End: Original strand, 24235300 - 24235428
Alignment:
Q  116 ctactgcctcagacacttataaaatttacacctcctagatattaactttattgctaagttgagattaacacagtcctcgtggatacgaacttattttatt 215  Q
    |||||||||| | |||| | | ||||||||| |||||  ||||||| |||||||||| ||||||||||||||||||||||||  ||||  |  ||||| |    
T  24235300 ctactgcctcgggcactaaaataatttacacatcctaagtattaaccttattgctaaattgagattaacacagtcctcgtgggaacga--tatttttact 24235397  T
Q  216 acttcgatagt-tttagtacacttgctaaaa 245  Q
    ||||||||||| |||| || |||||||||||    
T  24235398 acttcgatagtatttaataaacttgctaaaa 24235428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 116 - 240
Target Start/End: Complemental strand, 40677664 - 40677541
Alignment:
Q  116 ctactgcctcagacacttataaaatttacacctcctagatattaactttattgctaagttgagattaacacagtcctcgtggatacgaacttattttatt 215  Q
    |||||||||||| |||| | | ||||||||| ||||| |||||||  |||||||||| |||| |||||||||||||||||||  ||||  |  ||||| |    
T  40677664 ctactgcctcaggcactaaaataatttacacatcctaaatattaatcttattgctaaattgaaattaacacagtcctcgtgggaacga--tatttttact 40677567  T
Q  216 acttcgatagtt-ttagtacacttgc 240  Q
    |||||||||||| || ||||||||||    
T  40677566 acttcgatagttattggtacacttgc 40677541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 138 - 256
Target Start/End: Complemental strand, 42368582 - 42368464
Alignment:
Q  138 aatttacacctcctagatattaactttattgctaagttgagattaacacagtcctcgtggatacgaacttattttattacttcgatagt-tttagtacac 236  Q
    |||||| || ||||| ||||| |||||||| |||| ||||||||||||||||  | ||||  ||||  ||  ||||||||||||||||| ||||||||||    
T  42368582 aatttatacatcctaaatatttactttatttctaaattgagattaacacagtttttgtgggaacgatatt--tttattacttcgatagtatttagtacac 42368485  T
Q  237 ttgct-aaaatatctatcata 256  Q
    ||||| |||||||||||||||    
T  42368484 ttgctaaaaatatctatcata 42368464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 206 - 258
Target Start/End: Original strand, 30926844 - 30926895
Alignment:
Q  206 ttattttattacttcgatagttttagtacacttgctaaaatatctatcatata 258  Q
    ||||||||||||||||||||||||| |||||||||||||| ||||||||||||    
T  30926844 ttattttattacttcgatagttttaatacacttgctaaaa-atctatcatata 30926895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 138 - 254
Target Start/End: Complemental strand, 31585813 - 31585696
Alignment:
Q  138 aatttacacctcctagatattaactttattgctaagttgagattaacacagtcctcgtggatacgaactta--ttttattacttcgata--gttttagta 233  Q
    |||||| || ||||||||||| |||||||| |||| |||||||||||||||| || ||||    |||| ||  ||||||||||||||||   ||||||||    
T  31585813 aatttatacatcctagatatttactttatttctaaattgagattaacacagttcttgtgg----gaacatattttttattacttcgatacgtttttagta 31585718  T
Q  234 cacttgct-aaaatatctatca 254  Q
    |||||||| |||||||||||||    
T  31585717 cacttgctaaaaatatctatca 31585696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 193 - 255
Target Start/End: Original strand, 13137257 - 13137320
Alignment:
Q  193 cgtggatacgaacttattttattacttcgat--agttttagtacacttgctaaaatatctatcat 255  Q
    |||||||||||||||||||||||| ||||||  | |||||||||||||||||||| |||||||||    
T  13137257 cgtggatacgaacttattttattatttcgatgcatttttagtacacttgctaaaa-atctatcat 13137320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 133 - 244
Target Start/End: Complemental strand, 35521249 - 35521138
Alignment:
Q  133 tataaaatttacacctcctagatattaactttattgctaagttgagattaacacagtcctcgtggatacgaacttat-tttattacttcgatagttttag 231  Q
    |||||| |||| || ||| ||||| ||||  ||||||||| |||| |||||| |||| ||||| |||||||| |||| |||||||||||||||  || ||    
T  35521249 tataaattttatacatccgagataataacaatattgctaaattgatattaacgcagttctcgtagatacgaatttatatttattacttcgataaatt-ag 35521151  T
Q  232 tacacttgctaaa 244  Q
    |||||||||||||    
T  35521150 tacacttgctaaa 35521138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 165 - 254
Target Start/End: Complemental strand, 24385015 - 24384925
Alignment:
Q  165 attgctaagttgagattaaca-cagtcctcgtggatacgaactta-ttttattacttcgatagttttagtacacttgctaaaatatctatca 254  Q
    |||||||||| || ||||| | ||||| ||||| ||||||| ||| ||||||||||||||||||||| ||||||||||  ||||||||||||    
T  24385015 attgctaagtagaaattaataacagtcatcgtgaatacgaatttaattttattacttcgatagttttggtacacttgc-caaatatctatca 24384925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 188 - 255
Target Start/End: Original strand, 36327107 - 36327172
Alignment:
Q  188 gtcctcgtggatacgaacttattttattacttcgatagttttagtacacttgctaaaatatctatcat 255  Q
    ||||||||||||||||| |||||| ||||||||||||||||| || |||||||  |||||||||||||    
T  36327107 gtcctcgtggatacgaatttattt-attacttcgatagttttggttcacttgc-caaatatctatcat 36327172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 154 - 254
Target Start/End: Original strand, 10601091 - 10601190
Alignment:
Q  154 atattaactttattgctaagttgagattaacacagtcctcgtggatacgaacttattttattacttcgatagt-tttagtacacttgctaaaatatctat 252  Q
    ||||| ||||||||||||| |||| ||||||||||||||||||   ||||  |  ||||| |||||||||||| ||| |||||||||| ||||||| |||    
T  10601091 atatttactttattgctaaattgaaattaacacagtcctcgtgtgaacga--tatttttactacttcgatagtatttggtacacttgccaaaatatttat 10601188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 180 - 244
Target Start/End: Original strand, 40937309 - 40937372
Alignment:
Q  180 ttaacacagtcctcgtggatacgaacttattttattacttcgatag-ttttagtacacttgctaaa 244  Q
    ||||| ||||||||||||||| ||||  |||||||||||||||||| |||||||||| ||||||||    
T  40937309 ttaacgcagtcctcgtggatatgaac--attttattacttcgatagcttttagtacatttgctaaa 40937372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 188 - 240
Target Start/End: Complemental strand, 23673409 - 23673358
Alignment:
Q  188 gtcctcgtggatacgaacttattttattacttcgatagttttagtacacttgc 240  Q
    ||||||||||||||||| |||||| ||||||||||||||||| || |||||||    
T  23673409 gtcctcgtggatacgaatttattt-attacttcgatagttttggttcacttgc 23673358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 166 - 229
Target Start/End: Original strand, 29436025 - 29436088
Alignment:
Q  166 ttgctaagttgagattaaca-cagtcctcgtggatacgaacttattttattacttcgatagtttt 229  Q
    ||||||||| || ||||||| | |||||||||||||||||||| | |||||||||||||||||||    
T  29436025 ttgctaagtagaaattaacaacggtcctcgtggatacgaactt-tattattacttcgatagtttt 29436088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 209 - 254
Target Start/End: Complemental strand, 43207698 - 43207651
Alignment:
Q  209 ttttattacttcgatag--ttttagtacacttgctaaaatatctatca 254  Q
    ||||||||||||||||   |||||||||||||||||||||||||||||    
T  43207698 ttttattacttcgatacgtttttagtacacttgctaaaatatctatca 43207651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 42 - 80
Target Start/End: Original strand, 18939031 - 18939068
Alignment:
Q  42 gggattcatcggcttaatcattcttctcaaatcatcttt 80  Q
    |||||||||||||||||||||||||||| ||||||||||    
T  18939031 gggattcatcggcttaatcattcttctc-aatcatcttt 18939068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 165; Significance: 5e-88; HSPs: 44)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 165; E-Value: 5e-88
Query Start/End: Original strand, 6 - 254
Target Start/End: Original strand, 3195196 - 3195442
Alignment:
Q  6 aataaagggaggtaaactactcgtataagacaatacgggattcatcggcttaatcattcttctcaaatcatctttcaaccaacttttacttacttttgtt 105  Q
    |||||||||||||||||||||| |||||  |||||  | |||||||||||||||||| ||| ||||||||||||||||| |||||||| ||||||||  |    
T  3195196 aataaagggaggtaaactactcatataaagcaatagcgcattcatcggcttaatcatccttttcaaatcatctttcaac-aactttta-ttactttttat 3195293  T
Q  106 acacttaaatctactgcctcagacacttataaaatttacacctcctagatattaactttattgctaagttgagattaacacagtcctcgtggatacgaac 205  Q
     |||  ||| |||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3195294 gcacacaaacctactgcctcaggcacttataaaatttacacatcctagatattaactttattgctaagttgagattaacacagtcctcgtggatacgaac 3195393  T
Q  206 ttattttattacttcgatagttttagtacacttgctaaaatatctatca 254  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||    
T  3195394 ttattttattacttcgatagttttagtacacttgctaaaatatttatca 3195442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 158; E-Value: 8e-84
Query Start/End: Original strand, 1 - 254
Target Start/End: Complemental strand, 34652776 - 34652525
Alignment:
Q  1 ttaggaataaagggaggtaaactactcgtataagacaatacgggattcatcggcttaatcattcttctcaaatcatctttcaaccaacttttacttactt 100  Q
    |||| |||||| ||||||||||||||| |||||  |||||  |||||||||||||||||||| ||| ||||||||||||||||| |||||||| || |||    
T  34652776 ttagtaataaatggaggtaaactactcatataaagcaatagcggattcatcggcttaatcatccttttcaaatcatctttcaac-aactttta-ttgctt 34652679  T
Q  101 ttgttacacttaaatctactgcctcagacacttataaaatttacacctcctagatattaactttattgctaagttgagattaacacagtcctcgtggata 200  Q
    ||  | |||  ||| |||||| ||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  34652678 tttatgcacacaaacctactgtctcaggcacttataaaatttacacatcctagatattaactttattgctaagttgagattaacacagtcctcgtggata 34652579  T
Q  201 cgaacttattttattacttcgatagttttagtacacttgctaaaatatctatca 254  Q
    | ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  34652578 caaacttattttattacttcgatagttttagtacacttgctaaaatatctatca 34652525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 149; E-Value: 2e-78
Query Start/End: Original strand, 10 - 254
Target Start/End: Original strand, 26548200 - 26548441
Alignment:
Q  10 aagggaggtaaactactcgtataagacaatacgggattcatcggcttaatcattcttctcaaatcatctttcaaccaacttttacttacttttgttacac 109  Q
    ||||||||||| |||||| ||||  |||||| ||||||||||||||||||||| ||||||||||||||||| ||| |||||| |  |||||||  |||||    
T  26548200 aagggaggtaa-ctactcatatagaacaataggggattcatcggcttaatcatccttctcaaatcatcttttaac-aacttt-atatactttttatacac 26548296  T
Q  110 ttaaatctactgcctcagacacttataaaatttacacctcctagatattaactttattgctaagttgagattaacacagtcctcgtggatacgaacttat 209  Q
      ||| |||||||||||| |||||||||| ||||||| ||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  26548297 acaaacctactgcctcaggcacttataaagtttacacatcctagatactaactttattgctaagttaagattaacacagtcctcgtggatacgaacttat 26548396  T
Q  210 tttattacttcgatagttttagtacacttgctaaaatatctatca 254  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  26548397 tttattacttcgatagttttagtacacttgctaaaatatctatca 26548441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 149; E-Value: 2e-78
Query Start/End: Original strand, 10 - 254
Target Start/End: Original strand, 26551759 - 26552000
Alignment:
Q  10 aagggaggtaaactactcgtataagacaatacgggattcatcggcttaatcattcttctcaaatcatctttcaaccaacttttacttacttttgttacac 109  Q
    ||||||||||| |||||| ||||  |||||| ||||||||||||||||||||| ||||||||||||||||| ||| |||||| |  |||||||  |||||    
T  26551759 aagggaggtaa-ctactcatatagaacaataggggattcatcggcttaatcatccttctcaaatcatcttttaac-aacttt-atatactttttatacac 26551855  T
Q  110 ttaaatctactgcctcagacacttataaaatttacacctcctagatattaactttattgctaagttgagattaacacagtcctcgtggatacgaacttat 209  Q
      ||| |||||||||||| |||||||||| ||||||| ||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  26551856 acaaacctactgcctcaggcacttataaagtttacacatcctagatactaactttattgctaagttaagattaacacagtcctcgtggatacgaacttat 26551955  T
Q  210 tttattacttcgatagttttagtacacttgctaaaatatctatca 254  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  26551956 tttattacttcgatagttttagtacacttgctaaaatatctatca 26552000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 147; E-Value: 3e-77
Query Start/End: Original strand, 20 - 254
Target Start/End: Complemental strand, 28562362 - 28562130
Alignment:
Q  20 aactactcgtataagacaatacgggattcatcggcttaatcattcttctcaaatcatctttcaaccaacttttacttacttttgttacacttaaatctac 119  Q
    |||||||| ||||  |||||| ||||||||||||||||||||| ||||||||||||||||| ||| |||||| |  |||||||  |||||  ||| ||||    
T  28562362 aactactcatatagaacaataggggattcatcggcttaatcatccttctcaaatcatcttttaac-aacttt-atatactttttatacacacaaacctac 28562265  T
Q  120 tgcctcagacacttataaaatttacacctcctagatattaactttattgctaagttgagattaacacagtcctcgtggatacgaacttattttattactt 219  Q
    |||||||| |||||||||| ||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  28562264 tgcctcaggcacttataaagtttacacatcctagatactaactttattgctaagttgagattaacacagtcctcgtggatacgaacctattttattactt 28562165  T
Q  220 cgatagttttagtacacttgctaaaatatctatca 254  Q
    |||||||||||||||||||||||||||||||||||    
T  28562164 cgatagttttagtacacttgctaaaatatctatca 28562130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 147; E-Value: 3e-77
Query Start/End: Original strand, 20 - 254
Target Start/End: Complemental strand, 28565930 - 28565698
Alignment:
Q  20 aactactcgtataagacaatacgggattcatcggcttaatcattcttctcaaatcatctttcaaccaacttttacttacttttgttacacttaaatctac 119  Q
    |||||||| ||||  |||||| ||||||||||||||||||||| ||||||||||||||||| ||| |||||| |  |||||||  |||||  ||| ||||    
T  28565930 aactactcatatagaacaataggggattcatcggcttaatcatccttctcaaatcatcttttaac-aacttt-atatactttttatacacacaaacctac 28565833  T
Q  120 tgcctcagacacttataaaatttacacctcctagatattaactttattgctaagttgagattaacacagtcctcgtggatacgaacttattttattactt 219  Q
    |||||||| |||||||||| ||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  28565832 tgcctcaggcacttataaagtttacacatcctagatactaactttattgctaagttgagattaacacagtcctcgtggatacgaacctattttattactt 28565733  T
Q  220 cgatagttttagtacacttgctaaaatatctatca 254  Q
    |||||||||||||||||||||||||||||||||||    
T  28565732 cgatagttttagtacacttgctaaaatatctatca 28565698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 146; E-Value: 1e-76
Query Start/End: Original strand, 45 - 254
Target Start/End: Original strand, 30764379 - 30764586
Alignment:
Q  45 attcatcggcttaatcattcttctcaaatcatctttcaaccaacttttacttacttttgttacacttaaatctactgcctcagacacttataaaatttac 144  Q
    |||||||||||||||||| ||| ||||||||||||||||| |||||||| || |||||  | |||  ||| |||||||||||| ||||||||||||||||    
T  30764379 attcatcggcttaatcatccttttcaaatcatctttcaac-aactttta-ttgctttttatgcacacaaacctactgcctcaggcacttataaaatttac 30764476  T
Q  145 acctcctagatattaactttattgctaagttgagattaacacagtcctcgtggatacgaacttattttattacttcgatagttttagtacacttgctaaa 244  Q
    || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30764477 acatcctagatattaactttattgctaagttgagattaacacagtcctcgtggatacgaacttattttattacttcgatagttttagtacacttgctaaa 30764576  T
Q  245 atatctatca 254  Q
    |||| |||||    
T  30764577 atatttatca 30764586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 142; E-Value: 3e-74
Query Start/End: Original strand, 45 - 254
Target Start/End: Original strand, 30761560 - 30761767
Alignment:
Q  45 attcatcggcttaatcattcttctcaaatcatctttcaaccaacttttacttacttttgttacacttaaatctactgcctcagacacttataaaatttac 144  Q
    |||||||||||||||||| ||| ||||||||||||||||| |||||||| || |||||  | |||  ||| |||||||||||||||||||||||||||||    
T  30761560 attcatcggcttaatcatccttttcaaatcatctttcaac-aactttta-ttgctttttatgcacacaaacctactgcctcagacacttataaaatttac 30761657  T
Q  145 acctcctagatattaactttattgctaagttgagattaacacagtcctcgtggatacgaacttattttattacttcgatagttttagtacacttgctaaa 244  Q
    || ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  30761658 acatcctagatattaactttattgttaagttgagattaacacagtcctcgtggatacgaacttattttattacttcgatagttttagtacacttgctgaa 30761757  T
Q  245 atatctatca 254  Q
    |||| |||||    
T  30761758 atatttatca 30761767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 125; E-Value: 4e-64
Query Start/End: Original strand, 116 - 252
Target Start/End: Original strand, 19686393 - 19686529
Alignment:
Q  116 ctactgcctcagacacttataaaatttacacctcctagatattaactttattgctaagttgagattaacacagtcctcgtggatacgaacttattttatt 215  Q
    |||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  19686393 ctactgcctcaggcacttataaaatttacacatcctagatattaactttattgctaagttgagattaacacagtcctcgtggatacgaacttattttact 19686492  T
Q  216 acttcgatagttttagtacacttgctaaaatatctat 252  Q
    |||||||||||||||||||||||||||||||||||||    
T  19686493 acttcgatagttttagtacacttgctaaaatatctat 19686529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 116 - 254
Target Start/End: Original strand, 19689776 - 19689914
Alignment:
Q  116 ctactgcctcagacacttataaaatttacacctcctagatattaactttattgctaagttgagattaacacagtcctcgtggatacgaacttattttatt 215  Q
    |||||||||||| |||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |    
T  19689776 ctactgcctcaggcacttataaaatctacacatcctagatattaactttattgctaagttgagattaacacagtgctcgtggatacgaacttattttact 19689875  T
Q  216 acttcgatagttttagtacacttgctaaaatatctatca 254  Q
    |||||||||||||||||||||||||||||||||||||||    
T  19689876 acttcgatagttttagtacacttgctaaaatatctatca 19689914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 111; E-Value: 9e-56
Query Start/End: Original strand, 111 - 245
Target Start/End: Original strand, 2453500 - 2453634
Alignment:
Q  111 taaatctactgcctcagacacttataaaatttacacctcctagatattaactttattgctaagttgagattaacacagtcctcgtggatacgaacttatt 210  Q
    |||| |||||||||||| |||||||||||||||||  ||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  2453500 taaacctactgcctcaggcacttataaaatttacatatcctaaatattaactttattgctaagttgagattaacacagtcctcgtggatacaaacttatt 2453599  T
Q  211 ttattacttcgatagttttagtacacttgctaaaa 245  Q
    |||||||||||||||||||||||||||||||||||    
T  2453600 ttattacttcgatagttttagtacacttgctaaaa 2453634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 137 - 245
Target Start/End: Original strand, 7625342 - 7625453
Alignment:
Q  137 aaatttacacctcctagatattaactttattgctaagttgagattaacacagtcctcgtggatacgaac-ttattttattacttcgat--agttttagta 233  Q
    |||||||||| |||||||||||||| |||||||||| |||||||||||||||||||||||||||||||| |||||||| |||||||||  | ||||||||    
T  7625342 aaatttacacatcctagatattaacgttattgctaaattgagattaacacagtcctcgtggatacgaactttattttactacttcgatgcatttttagta 7625441  T
Q  234 cacttgctaaaa 245  Q
    ||||||||||||    
T  7625442 cacttgctaaaa 7625453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 138 - 245
Target Start/End: Original strand, 7271268 - 7271377
Alignment:
Q  138 aatttacacctcctagatattaactttattgctaagttgagattaacacagtcctcgtggatacgaacttattttattacttcgat--agttttagtaca 235  Q
    |||||| || ||||| ||||| | ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||  | ||||||||||    
T  7271268 aatttatacatcctaaatatttattttattgctaaattgagattaacacagtcctcgtggatacgaacttattttattacttcgatacatttttagtaca 7271367  T
Q  236 cttgctaaaa 245  Q
    ||||||||||    
T  7271368 cttgctaaaa 7271377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 148 - 245
Target Start/End: Complemental strand, 4099398 - 4099299
Alignment:
Q  148 tcctagatattaactttattgctaagttgagattaacacagtcctcgtggatacgaacttattttattacttcgat--agttttagtacacttgctaaaa 245  Q
    ||||| ||||| ||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||  | ||||||||||||||||||||    
T  4099398 tcctaaatatttactttattgctaaattgatattaacacagtcctcgtggatacgaacttattttattacttcgatgcatttttagtacacttgctaaaa 4099299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 20 - 163
Target Start/End: Complemental strand, 40799919 - 40799777
Alignment:
Q  20 aactactcgtataagacaatacgggattcatcggcttaatcattcttctcaaatcatctttcaaccaacttttacttacttttgttacacttaaatctac 119  Q
    |||||||| ||||  |||||| ||||||||||||||||||||| |||||||||||||||||||| ||| ||||| ||||||||  | |||  ||| ||||    
T  40799919 aactactcatatagaacaataggggattcatcggcttaatcatccttctcaaatcatctttcaa-caaattttatttactttttatgcacacaaacctac 40799821  T
Q  120 tgcctcagacacttataaaatttacacctcctagatattaactt 163  Q
    ||||||||  ||||||||||||||||  ||||||||||||||||    
T  40799820 tgcctcaggaacttataaaatttacatatcctagatattaactt 40799777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 154 - 245
Target Start/End: Complemental strand, 21332541 - 21332448
Alignment:
Q  154 atattaactttattgctaagttgagattaacacagtcctcgtggatacgaacttattttattacttcgat--agttttagtacacttgctaaaa 245  Q
    ||||| ||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||  | ||||||||||||||||||||    
T  21332541 atatttactttattgctaaattgaaattaacacagtcctcgtggatacgaacttattttattacttcgatacatttttagtacacttgctaaaa 21332448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 138 - 245
Target Start/End: Complemental strand, 28787202 - 28787093
Alignment:
Q  138 aatttacacctcctagatattaactttattgctaagttgagattaacacagtcctcgtggatacgaacttattttattacttcgat--agttttagtaca 235  Q
    |||||| || ||||| ||||| ||||||||||||| |||||| |||||| ||||||||||||||||||||||||||||||||||||  | ||||||||||    
T  28787202 aatttatacatcctaaatatttactttattgctaaattgagactaacacggtcctcgtggatacgaacttattttattacttcgatacatttttagtaca 28787103  T
Q  236 cttgctaaaa 245  Q
    ||||||||||    
T  28787102 cttgctaaaa 28787093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 138 - 245
Target Start/End: Original strand, 30066561 - 30066670
Alignment:
Q  138 aatttacacctcctagatattaactttattgctaagttgagattaacacagtcctcgtggatacgaacttattttattacttcgat--agttttagtaca 235  Q
    |||||| || ||||| ||||| ||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||  | ||||||||||    
T  30066561 aatttatacatcctaaatatttactttattgctaaattgagattaacacagtcctcgtggatacgaacctattttattacttcgatgcatttttagtaca 30066660  T
Q  236 cttgctaaaa 245  Q
     |||||||||    
T  30066661 tttgctaaaa 30066670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 1 - 124
Target Start/End: Complemental strand, 4731852 - 4731729
Alignment:
Q  1 ttaggaataaagggaggtaaactactcgtataagacaatacgggattcatcggcttaatcattcttctcaaatcatctttcaaccaacttttacttactt 100  Q
    |||||||||||||||  |||| ||||| |||||  |||||  ||||||||| ||||||||| || |||| |||||||||||||  |||||||||||||||    
T  4731852 ttaggaataaagggatttaaattactcatataaagcaatagtggattcatcagcttaatcactcatctccaatcatctttcaaataacttttacttactt 4731753  T
Q  101 ttgttacacttaaatctactgcct 124  Q
    |||||||||| |||||||||||||    
T  4731752 ttgttacactcaaatctactgcct 4731729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 138 - 255
Target Start/End: Complemental strand, 22936822 - 22936706
Alignment:
Q  138 aatttacacctcctagatattaactttattgctaagttgagattaacacagtcctcgtggatacgaacttattttattacttcgatagt-tttagtacac 236  Q
    ||||||||| ||||| ||||| ||||||||||||| ||||||||||||||||||||||||  ||||  |  ||||| |||||||||||| ||||||||||    
T  22936822 aatttacacatcctaaatatttactttattgctaaattgagattaacacagtcctcgtgggaacga--tatttttactacttcgatagtatttagtacac 22936725  T
Q  237 ttgctaaaatatctatcat 255  Q
    |||||||||||||||||||    
T  22936724 ttgctaaaatatctatcat 22936706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 112 - 239
Target Start/End: Original strand, 10629427 - 10629555
Alignment:
Q  112 aaatctactgcctcagacacttataaaatttacacctcctagatattaactttattgctaagttgagattaacacagtcctcgtggatacgaacttattt 211  Q
    ||||||||||||| || || | | | ||||||||| ||||| ||| ||| ||||||| ||| |||||||||||||||||||| ||||||| |||||||||    
T  10629427 aaatctactgccttaggcattaaaataatttacacatcctaaataataattttattgttaaattgagattaacacagtcctcatggatacaaacttattt 10629526  T
Q  212 tattacttcgatagt-tttagtacacttg 239  Q
    ||||||||||||||| ||| |||||||||    
T  10629527 tattacttcgatagtatttggtacacttg 10629555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 154 - 245
Target Start/End: Complemental strand, 21335560 - 21335467
Alignment:
Q  154 atattaactttattgctaagttgagattaacacagtcctcgtggatacgaacttattttattacttcgat--agttttagtacacttgctaaaa 245  Q
    ||||| ||||||||||||| |||| ||||||||||||||||||||||| |||||||||||||||||||||  | |||||||||||||| |||||    
T  21335560 atatttactttattgctaaattgaaattaacacagtcctcgtggatacaaacttattttattacttcgatacatttttagtacacttgttaaaa 21335467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 138 - 224
Target Start/End: Original strand, 33552371 - 33552457
Alignment:
Q  138 aatttacacctcctagatattaactttattgctaagttgagattaacacagtcctcgtggatacgaacttattttattacttcgata 224  Q
    |||||| || ||||| ||||| ||| ||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33552371 aatttatacatcctaaatatttactctattgttaaattgagattaacacagtcctcgtggatacgaacttattttattacttcgata 33552457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 138 - 254
Target Start/End: Original strand, 32838119 - 32838235
Alignment:
Q  138 aatttacacctcctagatattaactttattgctaagttgagattaacacagtcctcgtggatacgaacttattttattacttcgat--agttttagtaca 235  Q
    ||||||||| ||||| |||||||| |||||| ||| ||||||||||||||||||||||||| ||||  |  |||||||||||||||  | ||||||||||    
T  32838119 aatttacacatcctaaatattaaccttattgataaattgagattaacacagtcctcgtggaaacga--tatttttattacttcgatacatttttagtaca 32838216  T
Q  236 cttgctaaaatatctatca 254  Q
    ||||||||||||| |||||    
T  32838217 cttgctaaaatatttatca 32838235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 137 - 254
Target Start/End: Complemental strand, 14016022 - 14015906
Alignment:
Q  137 aaatttacacctcctagatattaactttattgctaagttgagattaacacagtcctcgtggatacgaacttattttattacttcgata-gttttagtaca 235  Q
    |||||||||| |||||||||||||| |||||||||| ||||||||||||||||||||||||| ||||  |  ||||| |||||||||| | ||| |||||    
T  14016022 aaatttacacatcctagatattaacgttattgctaaattgagattaacacagtcctcgtggaaacga--tatttttactacttcgataggatttggtaca 14015925  T
Q  236 cttgctaaaatatctatca 254  Q
    ||||| |||| ||||||||    
T  14015924 cttgccaaaaaatctatca 14015906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 137 - 245
Target Start/End: Complemental strand, 26752584 - 26752477
Alignment:
Q  137 aaatttacacctcctagatattaactttattgctaagttgagattaacacagtcctcgtggatacgaacttattttattacttcgatagt-tttagtaca 235  Q
    |||||||||| || ||||||||||| |||||||||| |||||||||||||||| |||||||  ||||  |  ||||| |||||||||||| |||||||||    
T  26752584 aaatttacacatcttagatattaacgttattgctaaattgagattaacacagtactcgtggggacga--tatttttactacttcgatagtatttagtaca 26752487  T
Q  236 cttgctaaaa 245  Q
    ||||||||||    
T  26752486 cttgctaaaa 26752477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 138 - 254
Target Start/End: Complemental strand, 41876636 - 41876521
Alignment:
Q  138 aatttacacctcctagatattaactttattgctaagttgagattaacacagtcctcgtggatacgaacttattttattacttcgatagt-tttagtacac 236  Q
    |||||| || ||||| ||||| |||||||| |||| ||||||||||||||||||||||||  ||||  |  ||||| |||||||||||| ||||||||||    
T  41876636 aatttatacatcctaaatatttactttatttctaaattgagattaacacagtcctcgtgggaacga--tatttttactacttcgatagtatttagtacac 41876539  T
Q  237 ttgctaaaatatctatca 254  Q
    ||||||||| ||||||||    
T  41876538 ttgctaaaaaatctatca 41876521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 138 - 254
Target Start/End: Original strand, 34832014 - 34832131
Alignment:
Q  138 aatttacacctcctagatattaactttattgctaagttgagattaacacagtcctcgtggatacgaacttattttattacttcgata--gttttagtaca 235  Q
    |||||| || ||||| ||||| |||||||| |||| ||||||||||||||||||| ||||  ||||  || ||||||||||||||||   ||||||||||    
T  34832014 aatttatacatcctaaatatttactttatttctaaattgagattaacacagtccttgtgggaacgatatt-ttttattacttcgatacgtttttagtaca 34832112  T
Q  236 cttgctaaaatatctatca 254  Q
    ||||||||| |||||||||    
T  34832113 cttgctaaagtatctatca 34832131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 137 - 254
Target Start/End: Complemental strand, 41306409 - 41306293
Alignment:
Q  137 aaatttacacctcctagatattaactttattgctaagttgagattaacacagtcctcgtggatacgaacttattttattacttcgatagt-tttagtaca 235  Q
    |||||| ||| ||||| ||||| || |||||||||| ||||||||||||||||||||||||  ||||  |  ||||| |||||||||||| |||||| ||    
T  41306409 aaattttcacatcctaaatatttaccttattgctaaattgagattaacacagtcctcgtgggaacga--tatttttactacttcgatagtatttagtgca 41306312  T
Q  236 cttgctaaaatatctatca 254  Q
    |||||||||| ||||||||    
T  41306311 cttgctaaaaaatctatca 41306293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 10 - 106
Target Start/End: Original strand, 26727052 - 26727148
Alignment:
Q  10 aagggaggtaaactactcgtataagacaatacgggattcatcggcttaatcattcttctcaaatcatc-tttcaaccaacttttacttacttttgtta 106  Q
    |||||||||||  ||||| ||||  |||||| |||||||||||||||||||||||||||  ||||||| |||||| |||| |||||||||||||||||    
T  26727052 aagggaggtaat-tactcatatagaacaataggggattcatcggcttaatcattcttctttaatcatcttttcaaacaacctttacttacttttgtta 26727148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 137 - 254
Target Start/End: Original strand, 31863955 - 31864072
Alignment:
Q  137 aaatttacacctcctagatattaactttattgctaagttgagattaacacagtcctcgtggatacgaacttattttattacttcgatagt-tttagtaca 235  Q
    ||||||| || ||||| ||||| ||||||||||||| ||||||||||| ||||||||||||  ||||  |  ||||| |||||| ||||| |||||||||    
T  31863955 aaatttatacatcctaaatatttactttattgctaaattgagattaactcagtcctcgtgggaacga--tatttttactacttcaatagtatttagtaca 31864052  T
Q  236 cttgct-aaaatatctatca 254  Q
    |||||| |||||||||||||    
T  31864053 cttgctaaaaatatctatca 31864072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 112 - 245
Target Start/End: Complemental strand, 18239415 - 18239276
Alignment:
Q  112 aaatctactgcctcagacacttataaaatttacacctcctagatattaactttattgctaagttgagattaacacagtcctcgtggatacgaactt---- 207  Q
    ||||||||||||| || |||  | | ||||||||| ||||||| | |||| |||||||||  |||||||||||| |||||  ||||||||||||||        
T  18239415 aaatctactgccttaggcaccaaaataatttacacatcctagacagtaaccttattgctagattgagattaacatagtccatgtggatacgaacttataa 18239316  T
Q  208 attttattacttcgat--agttttagtacacttgctaaaa 245  Q
    ||||||||||||||||  | ||||| ||||||||||||||    
T  18239315 attttattacttcgattcatttttaatacacttgctaaaa 18239276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 136 - 254
Target Start/End: Original strand, 31575655 - 31575773
Alignment:
Q  136 aaaatttacacctcctagatattaactttattgctaagttgagattaacacagtcctcgtggatacgaactta-ttttattacttcgatagttttagtac 234  Q
    ||||||||||  ||||||||| |||| |||||| | | |||||||||| || ||||| ||||| ||||||||| ||||||||||||||||   |||||||    
T  31575655 aaaatttacatatcctagataataacgttattgttcaattgagattaatacggtccttgtggaaacgaacttatttttattacttcgataaaattagtac 31575754  T
Q  235 acttgctaaaatatctatca 254  Q
    ||||| | ||||||||||||    
T  31575755 acttg-ttaaatatctatca 31575773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 138 - 223
Target Start/End: Original strand, 39192580 - 39192665
Alignment:
Q  138 aatttacacctcctagatattaactttattgctaagttgagattaacacagtcctcgtggatacgaacttattttattacttcgat 223  Q
    |||||| || ||||| ||||| | ||||||||||| |||||||||| |||||| ||||| |||||||||| |||||||| ||||||    
T  39192580 aatttatacatcctaaatatttaatttattgctaaattgagattaatacagtcttcgtgaatacgaacttcttttattaattcgat 39192665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 197 - 245
Target Start/End: Complemental strand, 40799776 - 40799728
Alignment:
Q  197 gatacgaacttattttattacttcgatagttttagtacacttgctaaaa 245  Q
    |||||||||||||||||||||||||||| |||||| |||||||||||||    
T  40799776 gatacgaacttattttattacttcgatatttttagcacacttgctaaaa 40799728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 138 - 247
Target Start/End: Complemental strand, 40916039 - 40915931
Alignment:
Q  138 aatttacacctcctagatattaactttattgctaagttgagattaacacagtcctcgtggatacgaacttattttattacttcgatagt-tttagtacac 236  Q
    ||||||||| ||||| |||||||| |||||||||| |||||||||||||||||||   ||  | ||  |  ||||| |||||||||||| ||||||||||    
T  40916039 aatttacacatcctaaatattaaccttattgctaaattgagattaacacagtcctaaagggaatga--tatttttactacttcgatagtatttagtacac 40915942  T
Q  237 ttgctaaaata 247  Q
    |||||||||||    
T  40915941 ttgctaaaata 40915931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 175 - 244
Target Start/End: Complemental strand, 18765577 - 18765507
Alignment:
Q  175 tgagattaacacagtcctcgtggatacgaactta-ttttattacttcgatagttttagtacacttgctaaa 244  Q
    ||||||||||||||||||||| ||||||||||||  |||||||||||||||   |||||| ||||||||||    
T  18765577 tgagattaacacagtcctcgtagatacgaacttagatttattacttcgataaaattagtatacttgctaaa 18765507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 154 - 254
Target Start/End: Original strand, 42063186 - 42063287
Alignment:
Q  154 atattaactttattgctaagttgagattaacacagtcctcgtggatacgaacttattttattacttcgatag---ttttagtacacttgctaaaatatct 250  Q
    ||||| ||||||||||| | |||||||||||| |||||||||||  ||||  |  ||||| |||||||||||   |||||||||||||||||||| ||||    
T  42063186 atatttactttattgctgaattgagattaacatagtcctcgtgggaacga--tatttttactacttcgatagtatttttagtacacttgctaaaaaatct 42063283  T
Q  251 atca 254  Q
    ||||    
T  42063284 atca 42063287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 138 - 254
Target Start/End: Original strand, 43491997 - 43492112
Alignment:
Q  138 aatttacacctcctagatattaactttattgctaagttgagattaacacagtcctcgtggatacgaacttattttattacttcgatagt-tttagtacac 236  Q
    |||||| || ||||| ||||| ||||||||||||| ||||||||||||| ||||| ||||  ||||  |  ||||| |||||||||||| |||||||||     
T  43491997 aatttatacatcctaaatatttactttattgctaaattgagattaacacggtccttgtgggaacga--tatttttactacttcgatagtatttagtacat 43492094  T
Q  237 ttgctaaaatatctatca 254  Q
    |||||||||  |||||||    
T  43492095 ttgctaaaaattctatca 43492112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 158 - 254
Target Start/End: Original strand, 21915383 - 21915480
Alignment:
Q  158 taactttattgctaagttgagattaacacagtcctcgtggatacgaactt-attttattacttcgatag-ttttagtacacttgctaaaatatctatca 254  Q
    |||| |||||||| | ||||||||||||| |||||| || | |||||||| ||| | ||||||| |||| |||||||||||||||| ||||||||||||    
T  21915383 taacgttattgcttacttgagattaacacggtcctcatgaaaacgaacttaattgttttacttcaatagtttttagtacacttgct-aaatatctatca 21915480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 174 - 254
Target Start/End: Original strand, 37215317 - 37215396
Alignment:
Q  174 ttgagattaacacagtcctcgtggatacgaacttattttattacttcgatagt-tttagtacacttgctaaaatatctatca 254  Q
    ||||||||||||||||||||||||  ||||  |  ||||| |||||||| ||| ||||||||||||||||||| ||||||||    
T  37215317 ttgagattaacacagtcctcgtgggaacga--tatttttactacttcgacagtatttagtacacttgctaaaaaatctatca 37215396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 166 - 254
Target Start/End: Original strand, 21680634 - 21680721
Alignment:
Q  166 ttgctaagttgagattaaca-cagtcctcgtggatacgaacttattttattacttcgatagttttagtacacttgctaaaatatctatca 254  Q
    ||||||||| || ||||||| | |||||||||||||| ||||| | ||| ||||||||||||||| ||||||||||  ||||||||||||    
T  21680634 ttgctaagtagaaattaacaacggtcctcgtggatacaaactt-tattactacttcgatagttttggtacacttgc-caaatatctatca 21680721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 188 - 240
Target Start/End: Complemental strand, 14616493 - 14616442
Alignment:
Q  188 gtcctcgtggatacgaacttattttattacttcgatagttttagtacacttgc 240  Q
    ||||||||||||||||| |||||| ||||||||||||||||| || |||||||    
T  14616493 gtcctcgtggatacgaatttattt-attacttcgatagttttggttcacttgc 14616442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 188 - 240
Target Start/End: Original strand, 33921395 - 33921446
Alignment:
Q  188 gtcctcgtggatacgaacttattttattacttcgatagttttagtacacttgc 240  Q
    |||||||||||||||||||| | ||| ||||||||||||||| ||||||||||    
T  33921395 gtcctcgtggatacgaactt-tattactacttcgatagttttggtacacttgc 33921446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0360 (Bit Score: 161; Significance: 1e-85; HSPs: 2)
Name: scaffold0360
Description:

Target: scaffold0360; HSP #1
Raw Score: 161; E-Value: 1e-85
Query Start/End: Original strand, 1 - 245
Target Start/End: Original strand, 6383 - 6626
Alignment:
Q  1 ttaggaataaagggaggtaaactactcgtataagacaatacgggattcatcggcttaatcattcttctcaaatcatctttcaaccaacttttacttactt 100  Q
    |||| |||||||||||||||||||||| |||||  |||||  |||||||||||||||||||||||||||||||||||||||||| |||||||| ||| ||    
T  6383 ttagtaataaagggaggtaaactactcatataaagcaatagcggattcatcggcttaatcattcttctcaaatcatctttcaac-aacttttatttattt 6481  T
Q  101 ttgttacacttaaatctactgcctcagacacttataaaatttacacctcctagatattaactttattgctaagttgagattaacacagtcctcgtggata 200  Q
    || |  |||  ||| |||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6482 ttttagcacacaaacctactgccacagacacttataaaatttacacatcctagatattaactttattgctaagttgagattaacacagtcctcgtggata 6581  T
Q  201 cgaacttattttattacttcgatagttttagtacacttgctaaaa 245  Q
    |||| ||||||||||||||||||| |||||||||||||| |||||    
T  6582 cgaatttattttattacttcgatatttttagtacacttggtaaaa 6626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0360; HSP #2
Raw Score: 149; E-Value: 2e-78
Query Start/End: Original strand, 1 - 245
Target Start/End: Original strand, 2551 - 2794
Alignment:
Q  1 ttaggaataaagggaggtaaactactcgtataagacaatacgggattcatcggcttaatcattcttctcaaatcatctttcaaccaacttttacttactt 100  Q
    |||| |||||||||||||||||||||| |||||  |||||  |||||||||||||||||||| ||||||||||||||||||||| |||||||| ||| ||    
T  2551 ttagtaataaagggaggtaaactactcatataaagcaatagcggattcatcggcttaatcatccttctcaaatcatctttcaac-aacttttatttattt 2649  T
Q  101 ttgttacacttaaatctactgcctcagacacttataaaatttacacctcctagatattaactttattgctaagttgagattaacacagtcctcgtggata 200  Q
    || |  ||   ||| |||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  2650 ttttagcagacaaacctactgcctcaggcacttataaaatttacacatcctagatattaactttattgctaagttgagattaacacagtccttgtggata 2749  T
Q  201 cgaacttattttattacttcgatagttttagtacacttgctaaaa 245  Q
    |||||||||||||||||||||||| ||| |||||||||| |||||    
T  2750 cgaacttattttattacttcgatattttaagtacacttggtaaaa 2794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 160; Significance: 5e-85; HSPs: 80)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 160; E-Value: 5e-85
Query Start/End: Original strand, 10 - 245
Target Start/End: Complemental strand, 2279627 - 2279394
Alignment:
Q  10 aagggaggtaaactactcgtataagacaatacgggattcatcggcttaatcattcttctcaaatcatctttcaaccaacttttacttacttttgttacac 109  Q
    ||||||||||| |||||| ||||  |||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||  | |||    
T  2279627 aagggaggtaa-ctactcatatagaacaataggggattcatcggcttaatcattcttctcaaatcatctttcaac-aacttttatttactttttatgcac 2279530  T
Q  110 ttaaatctactgcctcagacacttataaaatttacacctcctagatattaactttattgctaagttgagattaacacagtcctcgtggatacgaacttat 209  Q
      ||| |||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2279529 acaaacctactgcctcaggcacttataaaatttacacatcctagatattaactttattgctaagttgagattaacacagtcctcgtggatacgaacttat 2279430  T
Q  210 tttattacttcgatagttttagtacacttgctaaaa 245  Q
    |||||||||||||||||||||||| ||||| |||||    
T  2279429 tttattacttcgatagttttagtatacttgataaaa 2279394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 153; E-Value: 8e-81
Query Start/End: Original strand, 10 - 254
Target Start/End: Original strand, 2784228 - 2784469
Alignment:
Q  10 aagggaggtaaactactcgtataagacaatacgggattcatcggcttaatcattcttctcaaatcatctttcaaccaacttttacttacttttgttacac 109  Q
    ||||||||||| |||||| ||||  |||||| ||||||||||||||||||||| ||||||||||||||||| ||| |||||| |  |||||||  |||||    
T  2784228 aagggaggtaa-ctactcatatagaacaataagggattcatcggcttaatcatccttctcaaatcatcttttaac-aacttt-atatactttttatacac 2784324  T
Q  110 ttaaatctactgcctcagacacttataaaatttacacctcctagatattaactttattgctaagttgagattaacacagtcctcgtggatacgaacttat 209  Q
      ||| |||||||||||| |||||||||| ||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2784325 acaaacctactgcctcaggcacttataaagtttacacatcctagatactaactttattgctaagttgagattaacacagtcctcgtggatacgaacttat 2784424  T
Q  210 tttattacttcgatagttttagtacacttgctaaaatatctatca 254  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  2784425 tttattacttcgatagttttagtacacttgctaaaatatctatca 2784469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 153; E-Value: 8e-81
Query Start/End: Original strand, 1 - 254
Target Start/End: Original strand, 10963505 - 10963761
Alignment:
Q  1 ttaggaataaagggaggtaaactactcgtataagacaatacgggattcatcggcttaatcattcttctcaaatcatctttcaaccaacttttacttactt 100  Q
    |||| |||||||||||||||||||||| |||||  |||||  |||||||||||| ||||||| |||||| |||||||||||||| |||||||| ||||||    
T  10963505 ttagtaataaagggaggtaaactactcatataaagcaatagcggattcatcggcataatcatccttctcgaatcatctttcaac-aacttttatttactt 10963603  T
Q  101 ttgttacacttaaatctactgcctcagacacttataaaatttacacctcctagatattaactttattgctaagttgagattaacacagtcctcgtggata 200  Q
    ||  | |||  ||| |||||||||||| |||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10963604 tttatgcacacaaacctactgcctcaggcacttacaaaatttacacatcctagatattaactttattgctaagttgagattaacacagtcctcgtggata 10963703  T
Q  201 cgaactta----ttttattacttcgatagttttagtacacttgctaaaatatctatca 254  Q
    ||||||||    |||||||||||||||||||||||||| |||||||||||||||||||    
T  10963704 cgaacttattatttttattacttcgatagttttagtacgcttgctaaaatatctatca 10963761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 153; E-Value: 8e-81
Query Start/End: Original strand, 1 - 245
Target Start/End: Complemental strand, 25888489 - 25888246
Alignment:
Q  1 ttaggaataaagggaggtaaactactcgtataagacaatacgggattcatcggcttaatcattcttctcaaatcatctttcaaccaacttttacttactt 100  Q
    ||||||||||||||||||||||||||| |||||  |||||  |||||||||||||||||||| ||||||||||||||||||||| |||||||| ||| ||    
T  25888489 ttaggaataaagggaggtaaactactcatataaagcaatagcggattcatcggcttaatcatccttctcaaatcatctttcaac-aacttttatttattt 25888391  T
Q  101 ttgttacacttaaatctactgcctcagacacttataaaatttacacctcctagatattaactttattgctaagttgagattaacacagtcctcgtggata 200  Q
    ||  | |||  ||| |||||||||||  |||||||||||||||||| || |||||||||| |||||||||||||||||||||||||||||||||| ||||    
T  25888390 tttatgcacacaaacctactgcctcacgcacttataaaatttacacatcatagatattaattttattgctaagttgagattaacacagtcctcgtcgata 25888291  T
Q  201 cgaacttattttattacttcgatagttttagtacacttgctaaaa 245  Q
    ||||||||||||||||||||||||||||||||| |||||||||||    
T  25888290 cgaacttattttattacttcgatagttttagtatacttgctaaaa 25888246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 149; E-Value: 2e-78
Query Start/End: Original strand, 1 - 254
Target Start/End: Original strand, 10959998 - 10960254
Alignment:
Q  1 ttaggaataaagggaggtaaactactcgtataagacaatacgggattcatcggcttaatcattcttctcaaatcatctttcaaccaacttttacttactt 100  Q
    |||| |||||||||||||||||||||| |||||  |||||  |||||||||||| ||||||| |||||| |||||||||||||| |||||||| ||||||    
T  10959998 ttagtaataaagggaggtaaactactcatataaagcaatagcggattcatcggcataatcatccttctcgaatcatctttcaac-aacttttatttactt 10960096  T
Q  101 ttgttacacttaaatctactgcctcagacacttataaaatttacacctcctagatattaactttattgctaagttgagattaacacagtcctcgtggata 200  Q
    ||  | |||  ||| ||||| |||||| |||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10960097 tttatgcacacaaacctactacctcaggcacttacaaaatttacacatcctagatattaactttattgctaagttgagattaacacagtcctcgtggata 10960196  T
Q  201 cgaactta----ttttattacttcgatagttttagtacacttgctaaaatatctatca 254  Q
    ||||||||    |||||||||||||||||||||||||| |||||||||||||||||||    
T  10960197 cgaacttattatttttattacttcgatagttttagtacgcttgctaaaatatctatca 10960254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 134; E-Value: 2e-69
Query Start/End: Original strand, 1 - 235
Target Start/End: Original strand, 10967014 - 10967251
Alignment:
Q  1 ttaggaataaagggaggtaaactactcgtataagacaatacgggattcatcggcttaatcattcttctcaaatcatctttcaaccaacttttacttactt 100  Q
    |||| |||||||||||||||||||||| |||||  |||||  |||| ||||||| ||||||| |||||| |||||||||||||| |||||||| ||||||    
T  10967014 ttagtaataaagggaggtaaactactcatataaagcaatagcggatgcatcggcataatcatccttctcgaatcatctttcaac-aacttttatttactt 10967112  T
Q  101 ttgttacacttaaatctactgcctcagacacttataaaatttacacctcctagatattaactttattgctaagttgagattaacacagtcctcgtggata 200  Q
    ||  | |||  ||| |||||||||||| |||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10967113 tttatgcacacaaacctactgcctcaggcacttacaaaatttacacatcctagatattaactttattgctaagttgagattaacacagtcctcgtggata 10967212  T
Q  201 cgaactta----ttttattacttcgatagttttagtaca 235  Q
    ||||||||    |||||||||||||||||||||||||||    
T  10967213 cgaacttattatttttattacttcgatagttttagtaca 10967251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 133; E-Value: 7e-69
Query Start/End: Original strand, 1 - 240
Target Start/End: Complemental strand, 30158048 - 30157810
Alignment:
Q  1 ttaggaataaagggaggtaaactactcgtataagacaatacgggattcatcggcttaatcattcttctcaaatcatctttcaaccaacttttacttactt 100  Q
    ||||||||||||||||||||||| ||| |||||  ||||| | |||||||||| ||||| || ||| ||||||||||||||||| ||| |||| ||||||    
T  30158048 ttaggaataaagggaggtaaacttctcatataaagcaataagagattcatcggtttaataatccttttcaaatcatctttcaac-aacattta-ttactt 30157951  T
Q  101 ttgttacacttaaatctactgcctcagacacttataaaatttacacctcctagatattaactttattgctaagttgagattaacacagtcctcgtggata 200  Q
    ||  | |||  ||| ||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30157950 tttatgcacacaaacctactgcctcagacaattataaaatttacacatcctagatattaactttattgctaagttgagattaacacagtcctcgtggata 30157851  T
Q  201 cgaacttattttattacttcgatagtt-ttagtacacttgc 240  Q
    |||||||| |||||||||||||||||| || ||||||||||    
T  30157850 cgaacttaatttattacttcgatagttattggtacacttgc 30157810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 116 - 254
Target Start/End: Original strand, 18883437 - 18883575
Alignment:
Q  116 ctactgcctcagacacttataaaatttacacctcctagatattaactttattgctaagttgagattaacacagtcctcgtggatacgaacttattttatt 215  Q
    |||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |    
T  18883437 ctactgcctcaggcacttataaaatttacacatcctagatattaactttattgctaagttgagattaacacagtcctcgtgaatacgaacttattttact 18883536  T
Q  216 acttcgatagttttagtacacttgctaaaatatctatca 254  Q
    |||| ||||||||||||||||||||||||||||||||||    
T  18883537 actttgatagttttagtacacttgctaaaatatctatca 18883575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 113 - 245
Target Start/End: Complemental strand, 42354309 - 42354177
Alignment:
Q  113 aatctactgcctcagacacttataaaatttacacctcctagatattaactttattgctaagttgagattaacacagtcctcgtggatacgaacttatttt 212  Q
    ||||||||||||||| |||||||||||||||||| ||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||    
T  42354309 aatctactgcctcaggcacttataaaatttacacatcctagatattaactttattgttaagttgagattgacacagtcctcgtggatacgaacttatttt 42354210  T
Q  213 attacttcgatagttttagtacacttgctaaaa 245  Q
    |||||||||||||||||||||||||||||||||    
T  42354209 attacttcgatagttttagtacacttgctaaaa 42354177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 113; E-Value: 6e-57
Query Start/End: Original strand, 1 - 254
Target Start/End: Original strand, 44508838 - 44509094
Alignment:
Q  1 ttaggaataaagggaggtaaactactcgtataagacaatacgggattcatcggcttaatcattcttctcaaatcatctttcaaccaacttttacttactt 100  Q
    |||| |||||||||||||||||||||| |||||  |||||  |||||||||||||||||||| ||| ||||||||||||||||| |||||||| ||  ||    
T  44508838 ttagtaataaagggaggtaaactactcatataaagcaatagcggattcatcggcttaatcatccttttcaaatcatctttcaac-aactttta-ttgttt 44508935  T
Q  101 ttgttacacttaaatctactgcctcagacacttataaaatttacacctcctagatattaactttattgctaagttgagattaacacagtc------ctcg 194  Q
    ||  | |||  ||| |||||||||||| |||||||||| ||||||| || |||||||||||||||||||||||| |||||| |||||| |      ||||    
T  44508936 tttatgcacacaaacctactgcctcaggcacttataaattttacacatcatagatattaactttattgctaagt-gagattgacacagacacagccctcg 44509034  T
Q  195 tggatacgaacttattttattacttcgatagttttagtacacttgctaaaatatctatca 254  Q
    ||||||| |||||||||||||||||||||||||||||||||||| ||||||||| |||||    
T  44509035 tggatacaaacttattttattacttcgatagttttagtacacttactaaaatatttatca 44509094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 106; E-Value: 8e-53
Query Start/End: Original strand, 116 - 245
Target Start/End: Original strand, 4250611 - 4250739
Alignment:
Q  116 ctactgcctcagacacttataaaatttacacctcctagatattaactttattgctaagttgagattaacacagtcctcgtggatacgaacttattttatt 215  Q
    ||||||| |||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||    
T  4250611 ctactgcttcaggcacttataaaatttacacatcctagatattaactttattgctaagttgagattaacacagtcctcgtgg-tacgaatttattttatt 4250709  T
Q  216 acttcgatagttttagtacacttgctaaaa 245  Q
    ||||||||||||||||||||||||||||||    
T  4250710 acttcgatagttttagtacacttgctaaaa 4250739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 116 - 245
Target Start/End: Complemental strand, 54736106 - 54735978
Alignment:
Q  116 ctactgcctcagacacttataaaatttacacctcctagatattaactttattgctaagttgagattaacacagtcctcgtggatacgaacttattttatt 215  Q
    |||||||||| | |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||     
T  54736106 ctactgcctcgg-cacttataaaatttacacatcctagatattaactttattgctaagttgagattaacacaatcctcgtggatacgaacttattttata 54736008  T
Q  216 acttcgatagttttagtacacttgctaaaa 245  Q
    ||||||||| ||||| ||||||||||||||    
T  54736007 acttcgataattttaatacacttgctaaaa 54735978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 116 - 254
Target Start/End: Original strand, 3306075 - 3306213
Alignment:
Q  116 ctactgcctcagacacttataaaatttacacctcctagatattaactttattgctaagttgagattaacacagtcctcgtggatacgaacttattttatt 215  Q
    |||||||||||| || | | | ||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||    
T  3306075 ctactgcctcaggcattaaaataatttacacatcctagatattaactttattgctaggttgagattaacacagtcctcgtggatacgaacttaatttatt 3306174  T
Q  216 acttcgatagtt-ttagtacacttgctaaaatatctatca 254  Q
    |||||||||||| || ||||||||||  ||||||||||||    
T  3306175 acttcgatagttattggtacacttgc-caaatatctatca 3306213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 154 - 259
Target Start/End: Original strand, 10885206 - 10885313
Alignment:
Q  154 atattaactttattgctaagttgagattaacacagtcctcgtggatacgaacttattttattacttcgat--agttttagtacacttgctaaaatatcta 251  Q
    ||||| ||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||| |||  | ||||||||||||||||||||||||||    
T  10885206 atatttactttattgctaaattgagattaacacagtcctcgtggatacaaacttattttattactttgatgcatttttagtacacttgctaaaatatcta 10885305  T
Q  252 tcatatat 259  Q
    ||||||||    
T  10885306 tcatatat 10885313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 138 - 255
Target Start/End: Complemental strand, 20728504 - 20728385
Alignment:
Q  138 aatttacacctcctagatattaactttattgctaagttgagattaacacagtcctcgtggatacgaacttattttattacttcgat--agttttagtaca 235  Q
    |||||| || ||||| ||||| ||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||  | ||||||||||    
T  20728504 aatttatacatcctaaatattcactttattgctaaattgagattaacacagtcctcatggatacgaacttattttattacttcgattcatttttagtaca 20728405  T
Q  236 cttgctaaaatatctatcat 255  Q
    |||| |||||||||||||||    
T  20728404 cttgttaaaatatctatcat 20728385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 154 - 254
Target Start/End: Original strand, 52200257 - 52200359
Alignment:
Q  154 atattaactttattgctaagttgagattaacacagtcctcgtggatacgaacttattttattacttcgat--agttttagtacacttgctaaaatatcta 251  Q
    ||||| ||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||  | ||||| ||||||||||||||||||||    
T  52200257 atatttactttattgctaaattgaaattaacacagtcctcgtggatacgaacttattttattacttcgatacatttttaatacacttgctaaaatatcta 52200356  T
Q  252 tca 254  Q
    |||    
T  52200357 tca 52200359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 148 - 254
Target Start/End: Original strand, 10902285 - 10902393
Alignment:
Q  148 tcctagatattaactttattgctaagttgagattaacacagtcctcgtggatacgaacttattttattacttcgat--agttttagtacacttgctaaaa 245  Q
    ||||| ||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||  | ||||||||||||||||||||    
T  10902285 tcctaaatatttactttattgctaaattgagattaacacagtcctcgtggatacgaacttattttattacttagatacatttttagtacacttgctaaaa 10902384  T
Q  246 tatctatca 254  Q
     | ||||||    
T  10902385 aagctatca 10902393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 138 - 229
Target Start/End: Original strand, 31549519 - 31549610
Alignment:
Q  138 aatttacacctcctagatattaactttattgctaagttgagattaacacagtcctcgtggatacgaacttattttattacttcgatagtttt 229  Q
    |||||| || ||||| ||||| ||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  31549519 aatttatacatcctaaatatttactttattgctaaattgagattaacacagtcatcgtggatacgaacttattttattacttcgatagtttt 31549610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 148 - 254
Target Start/End: Original strand, 10881825 - 10881933
Alignment:
Q  148 tcctagatattaactttattgctaagttgagattaacacagtcctcgtggatacgaacttattttattacttcgat--agttttagtacacttgctaaaa 245  Q
    ||||| ||||| ||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||  | ||||||||||| ||||||||    
T  10881825 tcctaaatatttactttattgctaaattgatattaacacagtcctcgtggatacgaacttattttattacttcgatacatttttagtacacatgctaaaa 10881924  T
Q  246 tatctatca 254  Q
      |||||||    
T  10881925 attctatca 10881933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 20 - 108
Target Start/End: Complemental strand, 6173354 - 6173266
Alignment:
Q  20 aactactcgtataagacaatacgggattcatcggcttaatcattcttctcaaatcatctttcaaccaacttttacttacttttgttaca 108  Q
    |||||||| ||||  |||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||    
T  6173354 aactactcatatagaacaataggggattcatcggcttaatcattcttctcaaatcatctttcaaacaacttttacttacttctgttaca 6173266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 138 - 245
Target Start/End: Complemental strand, 28007938 - 28007829
Alignment:
Q  138 aatttacacctcctagatattaactttattgctaagttgagattaacacagtcctcgtggatacgaacttattttattacttcgat--agttttagtaca 235  Q
    |||||| || ||||| ||||| ||||||||||||| |||||||||||| |||||||||||||||||||||||||||| ||||||||  |  |||||||||    
T  28007938 aatttatacatcctaaatatttactttattgctaaattgagattaacatagtcctcgtggatacgaacttattttatcacttcgatgcatatttagtaca 28007839  T
Q  236 cttgctaaaa 245  Q
    ||||||||||    
T  28007838 cttgctaaaa 28007829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 138 - 254
Target Start/End: Original strand, 35412831 - 35412946
Alignment:
Q  138 aatttacacctcctagatattaactttattgctaagttgagattaacacagtcctcgtggatacgaacttattttattacttcgatagt-tttagtacac 236  Q
    ||||||||| ||||| ||||| ||||||||||||| ||||||||||||||||||||||||  ||||  |  ||||| |||||||||||| ||||||||||    
T  35412831 aatttacacatcctaaatatttactttattgctaaattgagattaacacagtcctcgtgggaacga--tatttttactacttcgatagtatttagtacac 35412928  T
Q  237 ttgctaaaatatctatca 254  Q
    ||||||||||||||||||    
T  35412929 ttgctaaaatatctatca 35412946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 138 - 245
Target Start/End: Complemental strand, 52309491 - 52309382
Alignment:
Q  138 aatttacacctcctagatattaactttattgctaagttgagattaacacagtcctcgtggatacgaacttattttattacttcgat--agttttagtaca 235  Q
    |||||| || ||||| ||||| ||||||||||||| |||| |||||||  ||||||||||||||||||||||||||||||||||||  | ||||||||||    
T  52309491 aatttatacatcctaaatatttactttattgctaaattgaaattaacattgtcctcgtggatacgaacttattttattacttcgatacatttttagtaca 52309392  T
Q  236 cttgctaaaa 245  Q
    ||||||||||    
T  52309391 cttgctaaaa 52309382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 116 - 254
Target Start/End: Original strand, 2873868 - 2874005
Alignment:
Q  116 ctactgcctcagacacttataaaatttacacctcctagatattaactttattgctaagttgagattaacacagtcctcgtggatacgaacttattttatt 215  Q
    |||||||||||| || | | | ||||||||| ||||| |||||||| |||||||||| || |||||||||||||||||||||  ||||  |  ||||| |    
T  2873868 ctactgcctcaggcattaaaataatttacacatcctaaatattaacattattgctaaattaagattaacacagtcctcgtgggaacga--tatttttact 2873965  T
Q  216 acttcgatagt-tttagtacacttgctaaaatatctatca 254  Q
    ||||||||||| ||||||||||||||||||||||||||||    
T  2873966 acttcgatagtatttagtacacttgctaaaatatctatca 2874005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 137 - 257
Target Start/End: Original strand, 7486896 - 7487016
Alignment:
Q  137 aaatttacacctcctagatattaactttattgctaagttgagattaacacagtcctcgtggatacgaacttattttattacttcgatagt-tttagtaca 235  Q
    |||||||||| ||||| |||||||| |||||||||| ||||||||||||||||||| ||||  ||||  |  |||||||||||||||||| |||||||||    
T  7486896 aaatttacacatcctaaatattaaccttattgctaaattgagattaacacagtccttgtgggaacga--tatttttattacttcgatagtatttagtaca 7486993  T
Q  236 cttgct-aaaatatctatcatat 257  Q
    |||||| ||||||||||||||||    
T  7486994 cttgctaaaaatatctatcatat 7487016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 137 - 240
Target Start/End: Original strand, 47051820 - 47051926
Alignment:
Q  137 aaatttacacctcctagatattaactttattgctaagttgagattaacacagtcctcgtggatacgaactt-attttattacttcgat--agttttagta 233  Q
    |||||||||| | |||||||||||  |||||||||| |||||||||||| ||||||||||||||||||||| ||||||||||||||||  | ||||||||    
T  47051820 aaatttacacatgctagatattaatgttattgctaaattgagattaacatagtcctcgtggatacgaacttaattttattacttcgatgcatttttagta 47051919  T
Q  234 cacttgc 240  Q
    |||||||    
T  47051920 cacttgc 47051926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 153 - 249
Target Start/End: Complemental strand, 55034775 - 55034677
Alignment:
Q  153 gatattaactttattgctaagttgagattaacacagtcctcgtggatacgaacttattttattacttcgat--agttttagtacacttgctaaaatatc 249  Q
    |||||| ||||||||||||| |||| ||||||| ||| || ||||||||||||||||||||||||||||||  | ||||||||||||||||||||||||    
T  55034775 gatatttactttattgctaaattgaaattaacatagttcttgtggatacgaacttattttattacttcgatgcatttttagtacacttgctaaaatatc 55034677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 138 - 254
Target Start/End: Original strand, 539152 - 539267
Alignment:
Q  138 aatttacacctcctagatattaactttattgctaagttgagattaacacagtcctcgtggatacgaacttattttattacttcgatagt-tttagtacac 236  Q
    ||||||||| ||||| |||||||| |||||||||| ||||||||||||||||||||||||  ||||  |  ||||| |||||||||||| ||||||| ||    
T  539152 aatttacacatcctaaatattaaccttattgctaaattgagattaacacagtcctcgtgggaacga--tatttttactacttcgatagtatttagtatac 539249  T
Q  237 ttgctaaaatatctatca 254  Q
    ||||||||||||||||||    
T  539250 ttgctaaaatatctatca 539267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 138 - 245
Target Start/End: Original strand, 16244208 - 16244317
Alignment:
Q  138 aatttacacctcctagatattaactttattgctaagttgagattaacacagtcctcgtggatacgaacttattttattacttcga--tagttttagtaca 235  Q
    |||||| || ||||| ||||| |||||||| |||| ||||||||||||| ||||||||| |||| ||||||||||||||||||||  || ||||||||||    
T  16244208 aatttatacatcctaaatatttactttattactaaattgagattaacacggtcctcgtgtatacaaacttattttattacttcgatgtatttttagtaca 16244307  T
Q  236 cttgctaaaa 245  Q
    ||||||||||    
T  16244308 cttgctaaaa 16244317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 138 - 245
Target Start/End: Complemental strand, 32287186 - 32287075
Alignment:
Q  138 aatttacacctcctagatattaactttattgctaagttgagattaacacagtcctcgtggatacgaactt----attttattacttcgatagttttagta 233  Q
    ||||||||| |||||||||||||| |||||||||| |||||||||||||||| |   ||||||| |||||    ||||||||||||||||||||||||||    
T  32287186 aatttacacatcctagatattaaccttattgctaaattgagattaacacagttcctatggatacaaacttataaattttattacttcgatagttttagta 32287087  T
Q  234 cacttgctaaaa 245  Q
    |||||| |||||    
T  32287086 cacttgttaaaa 32287075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 137 - 224
Target Start/End: Original strand, 47055250 - 47055338
Alignment:
Q  137 aaatttacacctcctagatattaactttattgctaagttgagattaacacagtcctcgtggatacgaa-cttattttattacttcgata 224  Q
    |||||||||| |||||||||||||| ||||| |||| |||||||||||||| |||||||||||||||| || |||||||||||||||||    
T  47055250 aaatttacacatcctagatattaacgttatttctaaattgagattaacacaatcctcgtggatacgaacctaattttattacttcgata 47055338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 116 - 250
Target Start/End: Original strand, 54724045 - 54724178
Alignment:
Q  116 ctactgcctcagacacttataaaatttacacctcctagatattaactttattgctaagttgagattaacacagtcctcgtggatacgaacttattttatt 215  Q
    |||||||||||| |||| | | ||||||||| ||||| ||||||||||||||||||| |||| |||||||| ||||||||||  ||||  |  ||||| |    
T  54724045 ctactgcctcaggcactaaaataatttacacatcctaaatattaactttattgctaaattgaaattaacacggtcctcgtgggaacga--tatttttact 54724142  T
Q  216 acttcgatagt-tttagtacacttgctaaaatatct 250  Q
    ||||||||| | ||||||||||||||||||||||||    
T  54724143 acttcgataatatttagtacacttgctaaaatatct 54724178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 138 - 245
Target Start/End: Complemental strand, 19304562 - 19304453
Alignment:
Q  138 aatttacacctcctagatattaactttattgctaagttgagattaacacagtcctcgtggatacgaacttattttattacttcgat--agttttagtaca 235  Q
    ||||||||| ||||  ||||||||  ||||||| | || ||||||||| ||||||||||||||| |||||||||||||||||||||  | ||||||||||    
T  19304562 aatttacacatcctcaatattaaccatattgctgaattaagattaacagagtcctcgtggatacaaacttattttattacttcgatgcaattttagtaca 19304463  T
Q  236 cttgctaaaa 245  Q
    ||||||||||    
T  19304462 cttgctaaaa 19304453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 174 - 254
Target Start/End: Complemental strand, 22993532 - 22993450
Alignment:
Q  174 ttgagattaacacagtcctcgtggatacgaactt-attttattacttcgatagtttt-agtacacttgctaaaatatctatca 254  Q
    |||||||||||||  |||||||||| |||||||| |||||||||||||||||||||| |||||||||||||||||||||||||    
T  22993532 ttgagattaacacgatcctcgtggaaacgaactttattttattacttcgatagtttttagtacacttgctaaaatatctatca 22993450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 137 - 254
Target Start/End: Complemental strand, 23298483 - 23298366
Alignment:
Q  137 aaatttacacctcctagatattaactttattgctaagttgagattaacacagtcctcgtggatacgaacttattttattacttcgat--agttttagtac 234  Q
    |||||||||| ||||| ||||| || |||||||||| ||||||||||||||||||||||||  ||||  |  ||||| |||||||||  | |||||||||    
T  23298483 aaatttacacatcctaaatatttaccttattgctaaattgagattaacacagtcctcgtgggaacga--tatttttactacttcgatacatttttagtac 23298386  T
Q  235 acttgctaaaatatctatca 254  Q
    ||||||||||||||||||||    
T  23298385 acttgctaaaatatctatca 23298366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 148 - 254
Target Start/End: Original strand, 41977346 - 41977453
Alignment:
Q  148 tcctagatattaactttattgctaagttgagattaacacagtcctcgtggatacgaacttattttattacttcgat--agttttagtacacttgctaaaa 245  Q
    ||||| ||||| | ||||||||||| || ||||||||||||||||||| ||||| |||||||||||||||||||||  | ||||| ||||||||||||||    
T  41977346 tcctaaatatttattttattgctaaattaagattaacacagtcctcgtagatacaaacttattttattacttcgatacatttttaatacacttgctaaaa 41977445  T
Q  246 tatctatca 254  Q
     ||||||||    
T  41977446 -atctatca 41977453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 116 - 254
Target Start/End: Complemental strand, 12541190 - 12541053
Alignment:
Q  116 ctactgcctcagacacttataaaatttacacctcctagatattaactttattgctaagttgagattaacacagtcctcgtggatacgaacttattttatt 215  Q
    |||||||||||| || | | | ||||||||| ||||| |||||||| |||||||||| |||||||||||||||||||| |||  ||||  |  ||||| |    
T  12541190 ctactgcctcaggcattaaaataatttacacatcctaaatattaaccttattgctaaattgagattaacacagtcctcatgggaacga--tatttttact 12541093  T
Q  216 acttcgatagt-tttagtacacttgctaaaatatctatca 254  Q
    ||||| ||||| |||||||||||||||| |||||||||||    
T  12541092 acttcaatagtatttagtacacttgctacaatatctatca 12541053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 137 - 255
Target Start/End: Complemental strand, 50461419 - 50461302
Alignment:
Q  137 aaatttacacctcctagatattaactttattgctaagttgagattaacacagtcctcgtggatacgaacttattttattacttcgatagt-tttagtaca 235  Q
    |||||||||  || ||||||||||| |||||||||| ||||||||||||||||||||||||  ||||  |  ||||| |||||||||||| ||| |||||    
T  50461419 aaatttacatatcatagatattaacgttattgctaaattgagattaacacagtcctcgtgggaacga--tatttttactacttcgatagtatttggtaca 50461322  T
Q  236 cttgctaaaatatctatcat 255  Q
    ||||| ||||||||||||||    
T  50461321 cttgccaaaatatctatcat 50461302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 116 - 254
Target Start/End: Complemental strand, 282087 - 281948
Alignment:
Q  116 ctactgcctcagacacttataaaatttacacctcctagatattaactttattgctaagttgagattaacacagtcctcgtggatacgaactta-ttttat 214  Q
    |||||||||  | ||||||||| |||||| | ||||||||| |||   ||||||||| |||||||||||||||||||| ||||||||||||||   ||||    
T  282087 ctactgcctagggcacttataacatttactcatcctagataataatcatattgctaatttgagattaacacagtcctcttggatacgaacttagaattat 281988  T
Q  215 tacttcgatagttttagtacacttgctaaaatatctatca 254  Q
    |||||||||||  ||| ||||| || | ||||||||||||    
T  281987 tacttcgatagaattaatacacctgtttaaatatctatca 281948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 137 - 254
Target Start/End: Complemental strand, 6434646 - 6434527
Alignment:
Q  137 aaatttacacctcctagatattaactttattgctaagttgagattaacacagtcctcgtggatacga-acttattttattacttcgatagt-tttagtac 234  Q
    |||||||||| || || |||||||| |||||| ||| ||||||||||||||||||||||||  |||| | || | |||||||||||||||| |||||| |    
T  6434646 aaatttacacatcataaatattaaccttattgttaaattgagattaacacagtcctcgtgggaacgatatttttattattacttcgatagtatttagtgc 6434547  T
Q  235 acttgctaaaatatctatca 254  Q
    ||||||||||| ||||||||    
T  6434546 acttgctaaaaaatctatca 6434527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 138 - 254
Target Start/End: Original strand, 30691061 - 30691177
Alignment:
Q  138 aatttacacctcctagatattaactttattgctaagttgagattaacacagtcctcgtggatacgaacttattttattacttcgatagt-tttagtacac 236  Q
    ||||||||| ||||| |||||||| |||||||||| ||||||||||||||||||||||||  ||||  |  ||||| |||||||||||| |||||| |||    
T  30691061 aatttacacatcctaaatattaaccttattgctaaattgagattaacacagtcctcgtgggaacga--tatttttactacttcgatagtatttagtgcac 30691158  T
Q  237 ttgctaaaa-tatctatca 254  Q
    ||||||||| |||||||||    
T  30691159 ttgctaaaattatctatca 30691177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 137 - 245
Target Start/End: Original strand, 24125824 - 24125931
Alignment:
Q  137 aaatttacacctcctagatattaactttattgctaagttgagattaacacagtcctcgtggatacgaacttattttattacttcgatagt-tttagtaca 235  Q
    ||||||| || ||||| ||||| ||||||||||||| ||||||||||||||||||||||||  ||||  |  ||||| |||||||||||| |||||||||    
T  24125824 aaatttatacatcctaaatatttactttattgctaaattgagattaacacagtcctcgtgggaacga--tatttttactacttcgatagtatttagtaca 24125921  T
Q  236 cttgctaaaa 245  Q
    ||||||||||    
T  24125922 cttgctaaaa 24125931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 138 - 245
Target Start/End: Original strand, 6922846 - 6922952
Alignment:
Q  138 aatttacacctcctagatattaactttattgctaagttgagattaacacagtcctcgtggatacgaacttattttattacttcgatagt-tttagtacac 236  Q
    ||||||||| ||||| ||||||||||||||||||| ||||||||||||||||| ||||||  ||||  |  ||||| |||||||||||| ||||||| ||    
T  6922846 aatttacacatcctaaatattaactttattgctaaattgagattaacacagtcttcgtgggaacga--tatttttactacttcgatagtatttagtatac 6922943  T
Q  237 ttgctaaaa 245  Q
    |||||||||    
T  6922944 ttgctaaaa 6922952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 148 - 245
Target Start/End: Original strand, 54461346 - 54461445
Alignment:
Q  148 tcctagatattaactttattgctaagttgagattaacacagtcctcgtggatacgaacttattttattacttcgat--agttttagtacacttgctaaaa 245  Q
    ||||| ||||| ||||||||||||| |||||||||| ||| || |||| |||||||||||||||||||||||||||  |  |||| ||||||||||||||    
T  54461346 tcctaaatatttactttattgctaaattgagattaatacattcttcgtagatacgaacttattttattacttcgatgcatgtttaatacacttgctaaaa 54461445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 148 - 245
Target Start/End: Complemental strand, 16184541 - 16184445
Alignment:
Q  148 tcctagatattaactttattgctaagttgagattaacacagtcctcgtggatacgaacttattttattacttcgatagt-tttagtacacttgctaaaa 245  Q
    ||||| ||||| |||||||| |||| ||||||||||||||||||||||||| ||||  |  ||||| |||||||||||| |||||||||||||||||||    
T  16184541 tcctaaatatttactttatttctaaattgagattaacacagtcctcgtggaaacga--tatttttactacttcgatagtatttagtacacttgctaaaa 16184445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 137 - 245
Target Start/End: Original strand, 24129101 - 24129208
Alignment:
Q  137 aaatttacacctcctagatattaactttattgctaagttgagattaacacagtcctcgtggatacgaacttattttattacttcgatagt-tttagtaca 235  Q
    ||||||| || ||||| ||||| ||||||||||||| ||||||||||||||||||||| ||  ||||  |  ||||| |||||||||||| |||||||||    
T  24129101 aaatttatacatcctaaatatttactttattgctaaattgagattaacacagtcctcgagggaacga--tatttttactacttcgatagtatttagtaca 24129198  T
Q  236 cttgctaaaa 245  Q
    ||||||||||    
T  24129199 cttgctaaaa 24129208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 141 - 244
Target Start/End: Original strand, 18542881 - 18542986
Alignment:
Q  141 ttacacctcctagatattaactttattgct-aagttgagattaacacagtcctcgtggatacgaactt-attttattacttcgatagttttagtacactt 238  Q
    |||||| ||||| ||| |||| |||||| | || ||||||||||||| |||||| |||| |||||||| ||||||||| |||||||||||||||||||||    
T  18542881 ttacacatcctatataataacgttattgtttaaattgagattaacacggtcctcatggaaacgaacttgattttattaattcgatagttttagtacactt 18542980  T
Q  239 gctaaa 244  Q
    | ||||    
T  18542981 gttaaa 18542986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 137 - 197
Target Start/End: Complemental strand, 18641640 - 18641580
Alignment:
Q  137 aaatttacacctcctagatattaactttattgctaagttgagattaacacagtcctcgtgg 197  Q
    |||||||||| || ||||||||||| |||||||||| ||||||||||||||||||||||||    
T  18641640 aaatttacacatcttagatattaaccttattgctaaattgagattaacacagtcctcgtgg 18641580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 137 - 197
Target Start/End: Complemental strand, 18644636 - 18644576
Alignment:
Q  137 aaatttacacctcctagatattaactttattgctaagttgagattaacacagtcctcgtgg 197  Q
    |||||||||| || ||||||||||| |||||||||| ||||||||||||||||||||||||    
T  18644636 aaatttacacatcttagatattaaccttattgctaaattgagattaacacagtcctcgtgg 18644576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 148 - 224
Target Start/End: Original strand, 43809920 - 43809996
Alignment:
Q  148 tcctagatattaactttattgctaagttgagattaacacagtcctcgtggatacgaacttattttattacttcgata 224  Q
    ||||| ||||| ||||||||||||| || | ||||||||||||| |||| |||||||||||||||| ||||||||||    
T  43809920 tcctaaatatttactttattgctaaattaaaattaacacagtccccgtgaatacgaacttattttactacttcgata 43809996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 138 - 254
Target Start/End: Original strand, 2775820 - 2775935
Alignment:
Q  138 aatttacacctcctagatattaactttattgctaagttgagattaacacagtcctcgtggatacgaacttattttattacttcgatagt-tttagtacac 236  Q
    |||||| || ||||| ||||| |||||||| |||| ||||||||||||||||||| ||||  ||||  |  |||||||||||||||||| ||||||||||    
T  2775820 aatttatacatcctaaatatttactttatttctaaattgagattaacacagtccttgtgggaacga--tatttttattacttcgatagtatttagtacac 2775917  T
Q  237 ttgctaaaatatctatca 254  Q
    ||||  ||| ||||||||    
T  2775918 ttgcacaaaaatctatca 2775935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 138 - 254
Target Start/End: Original strand, 2779062 - 2779177
Alignment:
Q  138 aatttacacctcctagatattaactttattgctaagttgagattaacacagtcctcgtggatacgaacttattttattacttcgatagt-tttagtacac 236  Q
    |||||| || ||||| ||||| |||||||| |||| ||||||||||||||||||| ||||  ||||  |  |||||||||||||||||| ||||||||||    
T  2779062 aatttatacatcctaaatatttactttatttctaaattgagattaacacagtccttgtgggaacga--tatttttattacttcgatagtatttagtacac 2779159  T
Q  237 ttgctaaaatatctatca 254  Q
    ||||  ||| ||||||||    
T  2779160 ttgcacaaaaatctatca 2779177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 138 - 254
Target Start/End: Original strand, 11190852 - 11190967
Alignment:
Q  138 aatttacacctcctagatattaactttattgctaagttgagattaacacagtcctcgtggatacgaacttattttattacttcgatagt-tttagtacac 236  Q
    ||||||||| |||||  ||||||| ||||| |||| |||||||||| ||||| |||||||  ||||  ||  |||| |||||||||||| ||||||||||    
T  11190852 aatttacacatcctaagtattaaccttattactaaattgagattaatacagttctcgtgggaacgatatt--tttactacttcgatagtatttagtacac 11190949  T
Q  237 ttgctaaaatatctatca 254  Q
    || |||||||||||||||    
T  11190950 ttactaaaatatctatca 11190967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 138 - 245
Target Start/End: Complemental strand, 19301136 - 19301027
Alignment:
Q  138 aatttacacctcctagatattaactttattgctaagttgagattaacacagtcctcgtggatacgaacttattttattacttcgat--agttttagtaca 235  Q
    ||||||||| ||||  ||||||||  ||||| | | |||||||||||||| | ||| |||||||||||||||||||||||||||||  | ||| ||||||    
T  19301136 aatttacacatcctgaatattaaccatattgttgaattgagattaacacaatgctcatggatacgaacttattttattacttcgatgcattttgagtaca 19301037  T
Q  236 cttgctaaaa 245  Q
    ||| ||||||    
T  19301036 cttactaaaa 19301027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 138 - 245
Target Start/End: Original strand, 25585012 - 25585120
Alignment:
Q  138 aatttacacctcctagatattaactttattgctaagttgagattaacacagtcctcgtggatacgaacttattttattacttcgata--gttttagtaca 235  Q
    |||||| || ||||| ||||| |||||||| ||||||| |||||||||||||||| ||||  ||||  || ||||||||||||||||   ||||||||||    
T  25585012 aatttatacatcctaaatatttactttatttctaagttaagattaacacagtccttgtgggaacgatatt-ttttattacttcgatacgtttttagtaca 25585110  T
Q  236 cttgctaaaa 245  Q
    ||||||||||    
T  25585111 cttgctaaaa 25585120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 116 - 240
Target Start/End: Original strand, 28327670 - 28327793
Alignment:
Q  116 ctactgcctcagacacttataaaatttacacctcctagatattaactttattgctaagttgagattaacacagtcctcgtggatacgaacttattttatt 215  Q
    |||||||||||| |||| | | ||||||||| ||||| |||||||  |||||||||| |||| |||||||||||||||||||  ||||  |  ||||| |    
T  28327670 ctactgcctcaggcactaaaataatttacacatcctaaatattaatcttattgctaaattgaaattaacacagtcctcgtgggaacga--tatttttact 28327767  T
Q  216 acttcgatagtt-ttagtacacttgc 240  Q
    |||||||||||| || ||||||||||    
T  28327768 acttcgatagttattggtacacttgc 28327793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 116 - 240
Target Start/End: Original strand, 28330995 - 28331118
Alignment:
Q  116 ctactgcctcagacacttataaaatttacacctcctagatattaactttattgctaagttgagattaacacagtcctcgtggatacgaacttattttatt 215  Q
    |||||||||||| |||| | | ||||||||| ||||| |||||||  |||||||||| |||| |||||||||||||||||||  ||||  |  ||||| |    
T  28330995 ctactgcctcaggcactaaaataatttacacatcctaaatattaatcttattgctaaattgaaattaacacagtcctcgtgggaacga--tatttttact 28331092  T
Q  216 acttcgatagtt-ttagtacacttgc 240  Q
    |||||||||||| || ||||||||||    
T  28331093 acttcgatagttattggtacacttgc 28331118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 10 - 106
Target Start/End: Complemental strand, 23374740 - 23374644
Alignment:
Q  10 aagggaggtaaactactcgtataagacaatacgggattcatcggcttaatcattcttctcaaatcatc-tttcaaccaacttttacttacttttgtta 106  Q
    |||||||||||  ||||| ||||  |||||| |||||||||||||||||||||||||||  ||||||| |||||| |||| |||| ||||||||||||    
T  23374740 aagggaggtaat-tactcatatagaacaataggggattcatcggcttaatcattcttctttaatcatcttttcaaacaacctttatttacttttgtta 23374644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 138 - 245
Target Start/End: Original strand, 43927175 - 43927281
Alignment:
Q  138 aatttacacctcctagatattaactttattgctaagttgagattaacacagtcctcgtggatacgaacttattttattacttcgatagt-tttagtacac 236  Q
    |||||| || ||||| ||||| |||||||| |||| ||||||||||||||||||||||||  ||||  |  ||||| ||||| |||||| ||||||||||    
T  43927175 aatttatacatcctaaatatttactttatttctaaattgagattaacacagtcctcgtgggaacga--tatttttactactttgatagtatttagtacac 43927272  T
Q  237 ttgctaaaa 245  Q
    |||||||||    
T  43927273 ttgctaaaa 43927281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 174 - 223
Target Start/End: Complemental strand, 55031905 - 55031856
Alignment:
Q  174 ttgagattaacacagtcctcgtggatacgaacttattttattacttcgat 223  Q
    |||| |||||||| ||||||||||||||||||||||||||||||||||||    
T  55031905 ttgaaattaacactgtcctcgtggatacgaacttattttattacttcgat 55031856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 154 - 217
Target Start/End: Original strand, 31857916 - 31857979
Alignment:
Q  154 atattaactttattgctaagttgagattaacacagtcctcgtggatacgaacttattttattac 217  Q
    ||||| ||||||||||||| |||||||||||||| ||| ||||||||  |||||||||||||||    
T  31857916 atatttactttattgctaaattgagattaacacaatccgcgtggataataacttattttattac 31857979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 138 - 245
Target Start/End: Original strand, 45896716 - 45896826
Alignment:
Q  138 aatttacacctcctagatattaactttattgctaagttgagattaacacagtcctcgtggatacg--aacttattttattacttcgatagt-tttagtac 234  Q
    |||||| || ||||| ||||| |||||||| |||| ||||||||||||||||||| ||||  |||  |  || |||||||||||||||||| |||||||     
T  45896716 aatttatacatcctaaatatttactttatttctaaattgagattaacacagtccttgtggggacgatatttttttttattacttcgatagtatttagtat 45896815  T
Q  235 acttgctaaaa 245  Q
    |||||||||||    
T  45896816 acttgctaaaa 45896826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 137 - 245
Target Start/End: Original strand, 53816154 - 53816261
Alignment:
Q  137 aaatttacacctcctagatattaactttattgctaagttgagattaacacagtcctcgtggatacgaacttattttattacttcgatagt-tttagtaca 235  Q
    |||||||||| ||||| |||||||| |||||| ||| |||||||||||| ||||||||| |  ||||  |  ||||| |||| ||||||| |||||||||    
T  53816154 aaatttacacatcctaaatattaaccttattgttaaattgagattaacatagtcctcgttggaacga--tatttttactactacgatagtatttagtaca 53816251  T
Q  236 cttgctaaaa 245  Q
    ||||||||||    
T  53816252 cttgctaaaa 53816261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 35 - 103
Target Start/End: Complemental strand, 16314576 - 16314507
Alignment:
Q  35 acaatacgggattcatcggcttaatcattcttctcaaatcatc-tttcaaccaacttttacttacttttg 103  Q
    |||||| |||||||||||||||||||||||||||  ||||||| |||||| |||| |||| |||||||||    
T  16314576 acaataggggattcatcggcttaatcattcttctttaatcatcttttcaaacaacctttatttacttttg 16314507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 35 - 103
Target Start/End: Complemental strand, 16414742 - 16414673
Alignment:
Q  35 acaatacgggattcatcggcttaatcattcttctcaaatcatc-tttcaaccaacttttacttacttttg 103  Q
    |||||| |||||||||||||||||||||||||||  ||||||| |||||| |||| |||| |||||||||    
T  16414742 acaataggggattcatcggcttaatcattcttctttaatcatcttttcaaacaacctttatttacttttg 16414673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 35 - 103
Target Start/End: Complemental strand, 18495570 - 18495501
Alignment:
Q  35 acaatacgggattcatcggcttaatcattcttctcaaatcatc-tttcaaccaacttttacttacttttg 103  Q
    |||||| |||||||||||||||||||||||||||  ||||||| |||||| |||| |||| |||||||||    
T  18495570 acaataggggattcatcggcttaatcattcttctttaatcatcttttcaaacaacctttatttacttttg 18495501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 10 - 106
Target Start/End: Complemental strand, 29233599 - 29233503
Alignment:
Q  10 aagggaggtaaactactcgtataagacaatacgggattcatcggcttaatcattcttctcaaatcatc-tttcaaccaacttttacttacttttgtta 106  Q
    |||||||||||  ||||| ||||  |||||| |||||||||||||||||||||| ||||  ||||||| |||||| |||| |||| ||||||||||||    
T  29233599 aagggaggtaat-tactcatatagaacaataggggattcatcggcttaatcattattctttaatcatcttttcaaacaacctttatttacttttgtta 29233503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 35 - 106
Target Start/End: Complemental strand, 18515716 - 18515644
Alignment:
Q  35 acaatacgggattcatcggcttaatcattcttctcaaatcatc-tttcaaccaacttttacttacttttgtta 106  Q
    |||||| |||||||||||| ||||||||||||||  ||||||| |||||| |||| |||| ||||||||||||    
T  18515716 acaataggggattcatcggattaatcattcttctttaatcatcttttcaaacaacctttatttacttttgtta 18515644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 137 - 197
Target Start/End: Original strand, 28266243 - 28266303
Alignment:
Q  137 aaatttacacctcctagatattaactttattgctaagttgagattaacacagtcctcgtgg 197  Q
    |||||||||| ||||| ||||| |  |||||||||| ||||||||||||||||||||||||    
T  28266243 aaatttacacatcctaaatatttagcttattgctaaattgagattaacacagtcctcgtgg 28266303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 5 - 72
Target Start/End: Complemental strand, 4225868 - 4225801
Alignment:
Q  5 gaataaagggaggtaaactactcgtataagacaatacgggattcatcggcttaatcattcttctcaaa 72  Q
    ||||||||||||||| ||||||| ||||  ||||||  ||||||| |||||||||||||| |||||||    
T  4225868 gaataaagggaggtagactactcatatagaacaatagcggattcaccggcttaatcattcatctcaaa 4225801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 138 - 254
Target Start/End: Complemental strand, 49742778 - 49742661
Alignment:
Q  138 aatttacacctcctagatattaactttattgctaagttgagattaacacagtcctcgtggatacgaacttattttattacttcgata--gttttagtaca 235  Q
    |||||| || ||||| ||||| |||||||| |||| ||||||||||||||||||| ||    ||||  || ||||||||||||||||   ||||||||||    
T  49742778 aatttatacatcctaaatatttactttatttctaaattgagattaacacagtccttgtaagaacgatatt-ttttattacttcgatacgtttttagtaca 49742680  T
Q  236 cttgctaaaatatctatca 254  Q
    ||||||||||  |||||||    
T  49742679 cttgctaaaaattctatca 49742661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 174 - 245
Target Start/End: Complemental strand, 10106432 - 10106362
Alignment:
Q  174 ttgagattaacacagtcctcgtggatacgaacttattttattacttcgatagt-tttagtacacttgctaaaa 245  Q
    ||||||||||||||||||||||||  ||||  |  ||||| |||||||||||| |||||||||||||||||||    
T  10106432 ttgagattaacacagtcctcgtgggaacga--tatttttactacttcgatagtatttagtacacttgctaaaa 10106362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 169 - 256
Target Start/End: Complemental strand, 27298408 - 27298321
Alignment:
Q  169 ctaagttgagattaacacagtcctcgtggatacgaactta-ttttattacttcgatagttttagtacacttgctaaaatatctatcata 256  Q
    |||| |||||||||||||| ||| |||||||||||||| |   ||||||||||||||   |||||||| ||||| ||||||||||||||    
T  27298408 ctaaattgagattaacacaatccccgtggatacgaactcagaattattacttcgataaaattagtacagttgct-aaatatctatcata 27298321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 42 - 80
Target Start/End: Complemental strand, 5886964 - 5886927
Alignment:
Q  42 gggattcatcggcttaatcattcttctcaaatcatcttt 80  Q
    |||||||||||||||||||||||||||| ||||||||||    
T  5886964 gggattcatcggcttaatcattcttctc-aatcatcttt 5886927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 42 - 80
Target Start/End: Complemental strand, 5896948 - 5896911
Alignment:
Q  42 gggattcatcggcttaatcattcttctcaaatcatcttt 80  Q
    |||||||||||||||||||||||||||| ||||||||||    
T  5896948 gggattcatcggcttaatcattcttctc-aatcatcttt 5896911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 166 - 254
Target Start/End: Original strand, 19869255 - 19869343
Alignment:
Q  166 ttgctaagttgagattaaca-cagtcctcgtggatacgaacttattttattacttcgatag-ttttagtacacttgctaaaatatctatca 254  Q
    ||||||||| || ||||||| | |||||||||||||||||||| | ||| ||||| ||||| |||||||||||||||  ||||||||||||    
T  19869255 ttgctaagtagaaattaacaacggtcctcgtggatacgaactt-tattactactttgatagattttagtacacttgc-caaatatctatca 19869343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 174 - 245
Target Start/End: Complemental strand, 30219832 - 30219759
Alignment:
Q  174 ttgagattaacacagtcctcgtggatacgaacttattttattacttcgat--agttttagtacacttgctaaaa 245  Q
    |||||||||| |||||| | ||||  ||||| ||||||||||||||||||  | |||||||| |||||||||||    
T  30219832 ttgagattaaaacagtctttgtgggaacgaatttattttattacttcgatgcatttttagtaaacttgctaaaa 30219759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 180 - 239
Target Start/End: Complemental strand, 3292782 - 3292721
Alignment:
Q  180 ttaacacagtcctcgtggatacgaacttat-tttattacttcgatagtttt-agtacacttg 239  Q
    |||||||||||||||||||||| | ||| | |||| ||||||||||||||| ||||||||||    
T  3292782 ttaacacagtcctcgtggatacaatcttttctttactacttcgatagttttcagtacacttg 3292721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #79
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 226 - 254
Target Start/End: Original strand, 3840941 - 3840969
Alignment:
Q  226 ttttagtacacttgctaaaatatctatca 254  Q
    |||||||||||||||||||||||||||||    
T  3840941 ttttagtacacttgctaaaatatctatca 3840969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #80
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 165 - 240
Target Start/End: Original strand, 13979642 - 13979717
Alignment:
Q  165 attgctaagttgagattaaca-cagtcctcgtggatacgaacttattttattacttcgatagttttagtacacttgc 240  Q
    |||||| ||| || ||||||| |||||||||||||| |||  |||||| ||||||||||||||||| || |||||||    
T  13979642 attgctgagtagaaattaacagcagtcctcgtggattcgattttattt-attacttcgatagttttggttcacttgc 13979717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 122; Significance: 2e-62; HSPs: 2)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 116 - 245
Target Start/End: Original strand, 228857 - 228986
Alignment:
Q  116 ctactgcctcagacacttataaaatttacacctcctagatattaactttattgctaagttgagattaacacagtcctcgtggatacgaacttattttatt 215  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  228857 ctactgcctcagacacttataaaatttacacatcctagatattaactttattgctaagttgagattaacacagtcctcgtgcatacgaacttattttatt 228956  T
Q  216 acttcgatagttttagtacacttgctaaaa 245  Q
    ||||||||||||||||||||||||||||||    
T  228957 acttcgatagttttagtacacttgctaaaa 228986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014; HSP #2
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 116 - 245
Target Start/End: Original strand, 223931 - 224060
Alignment:
Q  116 ctactgcctcagacacttataaaatttacacctcctagatattaactttattgctaagttgagattaacacagtcctcgtggatacgaacttattttatt 215  Q
    |||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||    
T  223931 ctactgcctcaggcacttataaaatttacacatcctagatattaactttattgctaagttgagattaacacagtcctcatagatacgaacttattttatt 224030  T
Q  216 acttcgatagttttagtacacttgctaaaa 245  Q
    ||||||||||||||||||||||||||||||    
T  224031 acttcgatagttttagtacacttgctaaaa 224060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0214 (Bit Score: 119; Significance: 1e-60; HSPs: 3)
Name: scaffold0214
Description:

Target: scaffold0214; HSP #1
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 116 - 254
Target Start/End: Original strand, 13829 - 13967
Alignment:
Q  116 ctactgcctcagacacttataaaatttacacctcctagatattaactttattgctaagttgagattaacacagtcctcgtggatacgaacttattttatt 215  Q
    ||||||||||||||||||||||||||||| | ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13829 ctactgcctcagacacttataaaatttacgcatcctagaaattaactttattgctaagttgagattaacacagtcctcgtggatacgaacttattttatt 13928  T
Q  216 acttcgatagttttagtacacttgctaaaatatctatca 254  Q
    |||||||||||| | ||||||||||||||||||||||||    
T  13929 acttcgatagttcttgtacacttgctaaaatatctatca 13967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0214; HSP #2
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 116 - 254
Target Start/End: Original strand, 27845 - 27983
Alignment:
Q  116 ctactgcctcagacacttataaaatttacacctcctagatattaactttattgctaagttgagattaacacagtcctcgtggatacgaacttattttatt 215  Q
    ||||||||||||||||||||||||||||| | ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27845 ctactgcctcagacacttataaaatttacgcatcctagaaattaactttattgctaagttgagattaacacagtcctcgtggatacgaacttattttatt 27944  T
Q  216 acttcgatagttttagtacacttgctaaaatatctatca 254  Q
    |||||||||||| | ||||||||||||||||||||||||    
T  27945 acttcgatagttcttgtacacttgctaaaatatctatca 27983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0214; HSP #3
Raw Score: 115; E-Value: 4e-58
Query Start/End: Original strand, 116 - 254
Target Start/End: Original strand, 20279 - 20417
Alignment:
Q  116 ctactgcctcagacacttataaaatttacacctcctagatattaactttattgctaagttgagattaacacagtcctcgtggatacgaacttattttatt 215  Q
    |||||||||||  |||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  20279 ctactgcctcaagcacttataaaatttacacatcctagaaattaactttattgctaagttgagattaacacagtcctcgtggatatgaacttattttatt 20378  T
Q  216 acttcgatagttttagtacacttgctaaaatatctatca 254  Q
    |||||| ||||||||||||||||||||||||||||||||    
T  20379 acttcggtagttttagtacacttgctaaaatatctatca 20417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0737 (Bit Score: 101; Significance: 8e-50; HSPs: 1)
Name: scaffold0737
Description:

Target: scaffold0737; HSP #1
Raw Score: 101; E-Value: 8e-50
Query Start/End: Original strand, 139 - 254
Target Start/End: Complemental strand, 7224 - 7108
Alignment:
Q  139 atttacacctcctagatattaactttattgctaagttgagattaacacagtcctcgtggatacgaactta-ttttattacttcgatagttttagtacact 237  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  7224 atttacacatcctagatattaactttattgctaagttgagattaacaccgtcctcgtggatacgaacttatttttattacttcgatagttttagtacact 7125  T
Q  238 tgctaaaatatctatca 254  Q
    |||||||||||||||||    
T  7124 tgctaaaatatctatca 7108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 88; Significance: 5e-42; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 116 - 254
Target Start/End: Complemental strand, 48311 - 48173
Alignment:
Q  116 ctactgcctcagacacttataaaatttacacctcctagatattaactttattgctaagttgagattaacacagtcctcgtggatacgaacttat-tttat 214  Q
    ||||||||||||| ||||||||||| ||||| |||| | ||||||| |||||||||| ||||||||||||||||| |||||||||||||||||| |||||    
T  48311 ctactgcctcagaaacttataaaatatacacatcctcgttattaaccttattgctaaattgagattaacacagtcatcgtggatacgaacttatatttat 48212  T
Q  215 tacttcgatagttttagtacacttgctaaaatatctatca 254  Q
    |||||| |||||||||||||||||||| ||||||||||||    
T  48211 tacttcaatagttttagtacacttgct-aaatatctatca 48173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0045 (Bit Score: 82; Significance: 2e-38; HSPs: 1)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 116 - 245
Target Start/End: Original strand, 89987 - 90119
Alignment:
Q  116 ctactgcctcagacacttata-aaatttacacctcctagatattaactttattgctaagttgagattaacacagtcctcgtggatacgaacttattttat 214  Q
    |||||||||||| |||| | | |||||||||| |||||||||||||| |||||||||| |||||||||||||||||||||||||||| ||||||||||||    
T  89987 ctactgcctcaggcactaaaacaaatttacacatcctagatattaacgttattgctaaattgagattaacacagtcctcgtggatacaaacttattttat 90086  T
Q  215 tacttcgat--agttttagtacacttgctaaaa 245  Q
    |||||||||  | ||||||||||||||||||||    
T  90087 tacttcgatgcatttttagtacacttgctaaaa 90119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0996 (Bit Score: 80; Significance: 3e-37; HSPs: 1)
Name: scaffold0996
Description:

Target: scaffold0996; HSP #1
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 138 - 246
Target Start/End: Complemental strand, 1802 - 1690
Alignment:
Q  138 aatttacacctcctagatattaactttattgctaagttgagattaacacagtcctcgtggatacgaactt----attttattacttcgatagttttagta 233  Q
    ||||||||| |||||||||||||| |||||||||| ||||||||||||||||||| ||||||||||||||    ||||||||||||||||||||||||||    
T  1802 aatttacacatcctagatattaaccttattgctaaattgagattaacacagtccttgtggatacgaacttataaattttattacttcgatagttttagta 1703  T
Q  234 cacttgctaaaat 246  Q
    |||||||||||||    
T  1702 cacttgctaaaat 1690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0080 (Bit Score: 79; Significance: 1e-36; HSPs: 1)
Name: scaffold0080
Description:

Target: scaffold0080; HSP #1
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 138 - 245
Target Start/End: Original strand, 27361 - 27470
Alignment:
Q  138 aatttacacctcctagatattaactttattgctaagttgagattaacacagtcctcgtggatacgaacttattttattacttcgat--agttttagtaca 235  Q
    ||||||||| ||||| ||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||  | ||||||||||    
T  27361 aatttacacatcctaaatatttactttattgctaaattgagattaacacagtcctcgtggatacgaacttattttattacttcgatgcatttttagtaca 27460  T
Q  236 cttgctaaaa 245  Q
    ||||||||||    
T  27461 cttgctaaaa 27470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 77; Significance: 2e-35; HSPs: 48)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 116 - 245
Target Start/End: Complemental strand, 29643125 - 29642994
Alignment:
Q  116 ctactgcctcagacacttataaaatttacacctcctagatattaactttattgctaagttgagattaacacagtcctcgtggatacgaacttattttatt 215  Q
    |||||||||| |||||| | | ||||||||| || |||| | ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  29643125 ctactgcctcggacactaaaataatttacacatcttagaaaataactttattgctaaattgagattaacacagtcctcgtggatacgaacttattttatt 29643026  T
Q  216 acttcgat--agttttagtacacttgctaaaa 245  Q
    ||||| ||  | ||||||||||||||||||||    
T  29643025 acttcaatgcatttttagtacacttgctaaaa 29642994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 138 - 254
Target Start/End: Original strand, 2405761 - 2405879
Alignment:
Q  138 aatttacacctcctagatattaactttattgctaagttgagattaacacagtcctcgtggatacgaacttattttattacttcgat--agttttagtaca 235  Q
    |||||| || ||||| ||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||  | ||||||||||    
T  2405761 aatttatacatcctaaatatttactttattgctaaattgagattaacacagtcctcgtggatacgaacttattttattacttcgatacatttttagtaca 2405860  T
Q  236 cttgctaaaatatctatca 254  Q
    ||||||||||  |||||||    
T  2405861 cttgctaaaaattctatca 2405879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 116 - 254
Target Start/End: Original strand, 28111276 - 28111413
Alignment:
Q  116 ctactgcctcagacacttataaaatttacacctcctagatattaactttattgctaagttgagattaacacagtcctcgtggatacgaacttattttatt 215  Q
    ||||||||||||||||| | | ||||||||| ||||| |||||||| |||||||||| ||||||||||||||||||||||||  ||||  |  ||||| |    
T  28111276 ctactgcctcagacactaaaataatttacacatcctaaatattaaccttattgctaaattgagattaacacagtcctcgtgggaacga--tatttttact 28111373  T
Q  216 acttcgatagt-tttagtacacttgctaaaatatctatca 254  Q
    ||||||||||| ||||||||||||||||||||||||||||    
T  28111374 acttcgatagtatttagtacacttgctaaaatatctatca 28111413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 17902809 - 17902694
Alignment:
Q  1 ttaggaataaagggaggtaaactactcgtataagacaatacgggattcatcggcttaatcattcttctcaaatcatctttcaaccaacttttacttactt 100  Q
    |||| ||||||| |||||||||||||| ||||  |||||| ||||||||||||||||||||||| |||| ||||||||||||| ||||||| ||||||||    
T  17902809 ttagtaataaagagaggtaaactactcatatagaacaataggggattcatcggcttaatcattcatctccaatcatctttcaaacaactttcacttactt 17902710  T
Q  101 ttgttacacttaaatc 116  Q
    |||||||||| |||||    
T  17902709 ttgttacactcaaatc 17902694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 10 - 116
Target Start/End: Original strand, 20981466 - 20981571
Alignment:
Q  10 aagggaggtaaactactcgtataagacaatacgggattcatcggcttaatcattcttctcaaatcatctttcaaccaacttttacttacttttgttacac 109  Q
    ||||||||||| |||||| ||||  |||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||    
T  20981466 aagggaggtaa-ctactcatatagaacaataggggattcatcggcttaatcattcttctcaaatcatctttcaaacaacttttacttacttctgttacac 20981564  T
Q  110 ttaaatc 116  Q
    | |||||    
T  20981565 tcaaatc 20981571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 28918472 - 28918587
Alignment:
Q  1 ttaggaataaagggaggtaaactactcgtataagacaatacgggattcatcggcttaatcattcttctcaaatcatctttcaaccaacttttacttactt 100  Q
    |||| |||||||||||||||||||||| ||||| |||||| ||||||||||||||| ||||| | | || ||||||||||||| |||||||||||| |||    
T  28918472 ttagaaataaagggaggtaaactactcatataaaacaataggggattcatcggcttgatcatccatttccaatcatctttcaaacaacttttactttctt 28918571  T
Q  101 ttgttacacttaaatc 116  Q
    |||||||||| |||||    
T  28918572 ttgttacactcaaatc 28918587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 138 - 245
Target Start/End: Complemental strand, 21111030 - 21110921
Alignment:
Q  138 aatttacacctcctagatattaactttattgctaagttgagattaacacagtcctcgtggatacgaacttattttattacttcgat--agttttagtaca 235  Q
    |||||| || ||||| ||||| ||||||||||||| |||||| ||||||||||||||||||||||||| |||||||||||||||||  | ||||||||||    
T  21111030 aatttatacatcctaaatatttactttattgctaaattgagagtaacacagtcctcgtggatacgaacatattttattacttcgatgcatttttagtaca 21110931  T
Q  236 cttgctaaaa 245  Q
    ||||||||||    
T  21110930 cttgctaaaa 21110921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 10 - 116
Target Start/End: Original strand, 37641974 - 37642079
Alignment:
Q  10 aagggaggtaaactactcgtataagacaatacgggattcatcggcttaatcattcttctcaaatcatctttcaaccaacttttacttacttttgttacac 109  Q
    ||||||||||| |||||| ||||  |||||| ||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||| ||||||||    
T  37641974 aagggaggtaa-ctactcatatagaacaataggggattcatcggcttaatcattcttctcaaatcatctttcaaataacttttacttacttctgttacac 37642072  T
Q  110 ttaaatc 116  Q
    | |||||    
T  37642073 tcaaatc 37642079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 120 - 229
Target Start/End: Complemental strand, 50196849 - 50196740
Alignment:
Q  120 tgcctcagacacttataaaatttacacctcctagatattaactttattgctaagttgagattaac-acagtcctcgtggatacgaacttattttattact 218  Q
    ||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||| || |||||||||||||| || || | ||||||||    
T  50196849 tgcctcagacacttaaaaaatttacacatcctagatattaactttattgctaagttgagattaacaacggtcctcgtggatac-aaattttattattact 50196751  T
Q  219 tcgatagtttt 229  Q
    || ||||||||    
T  50196750 tcaatagtttt 50196740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 116 - 254
Target Start/End: Original strand, 2794447 - 2794584
Alignment:
Q  116 ctactgcctcagacacttataaaatttacacctcctagatattaactttattgctaagttgagattaacacagtcctcgtggatacgaacttattttatt 215  Q
    ||||||||||||||| | | | ||||||||| ||||| |||||||| |||||||||| ||||||||||||||||||||||||  ||||  |  ||||| |    
T  2794447 ctactgcctcagacattaaaataatttacacatcctaaatattaaccttattgctaaattgagattaacacagtcctcgtgggaacga--tatttttact 2794544  T
Q  216 acttcgatagt-tttagtacacttgctaaaatatctatca 254  Q
    ||||||||||| ||||||||||||||||||| ||||||||    
T  2794545 acttcgatagtatttagtacacttgctaaaagatctatca 2794584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 137 - 254
Target Start/End: Complemental strand, 27536414 - 27536298
Alignment:
Q  137 aaatttacacctcctagatattaactttattgctaagttgagattaacacagtcctcgtggatacgaacttattttattacttcgatagt-tttagtaca 235  Q
    |||||||||| ||||| |||||||| |||||||||| |||||||||||||||||||||||   ||||  |  ||||| |||||||||||| |||||||||    
T  27536414 aaatttacacatcctaaatattaaccttattgctaaattgagattaacacagtcctcgtgtgaacga--tatttttactacttcgatagtatttagtaca 27536317  T
Q  236 cttgctaaaatatctatca 254  Q
    |||||||||||||||||||    
T  27536316 cttgctaaaatatctatca 27536298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 138 - 246
Target Start/End: Complemental strand, 49853010 - 49852900
Alignment:
Q  138 aatttacacctcctagatattaactttattgctaagttgagattaacacagtcctcgtggatacgaacttattttattacttcgat--agttttagtaca 235  Q
    |||||| || ||||| ||||| ||||||||||||| |||||||||||||| ||||| || || |||||||||||||||||||||||  | ||||||||||    
T  49853010 aatttatacatcctaaatatttactttattgctaaattgagattaacacaatcctcatgaatgcgaacttattttattacttcgatacatttttagtaca 49852911  T
Q  236 cttgctaaaat 246  Q
    |||||||||||    
T  49852910 cttgctaaaat 49852900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 138 - 220
Target Start/End: Original strand, 42022880 - 42022962
Alignment:
Q  138 aatttacacctcctagatattaactttattgctaagttgagattaacacagtcctcgtggatacgaacttattttattacttc 220  Q
    |||||| || ||||| ||||| ||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  42022880 aatttatacatcctaaatatttactttattgttaaattgagattaacacagtcctcgtggatacgaacttattttattacttc 42022962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 116 - 244
Target Start/End: Complemental strand, 34065064 - 34064936
Alignment:
Q  116 ctactgcctcagacacttataaaatttacacctcctagatattaactttattgctaagttgagattaacacagtcctcgtggatacgaac-ttattttat 214  Q
    ||||||||||   |||||||||||||||||| ||||| ||||||||||||||||| |||||||||||||||| || || ||||||||||| ||  |||||    
T  34065064 ctactgcctcgagcacttataaaatttacacatcctaaatattaactttattgct-agttgagattaacacaatcttcatggatacgaactttgatttat 34064966  T
Q  215 tacttcgatagttttagtacacttgctaaa 244  Q
    ||||| |||| ||| ||||||||| |||||    
T  34064965 tactttgataatttcagtacacttcctaaa 34064936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 148 - 217
Target Start/End: Complemental strand, 41058164 - 41058095
Alignment:
Q  148 tcctagatattaactttattgctaagttgagattaacacagtcctcgtggatacgaacttattttattac 217  Q
    ||||| ||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  41058164 tcctaaatatttactttattgctaaattgagattaacacagtcctcgtggatacgaacttattttattac 41058095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 10 - 109
Target Start/End: Original strand, 20964562 - 20964660
Alignment:
Q  10 aagggaggtaaactactcgtataagacaatacgggattcatcggcttaatcattcttctcaaatcatctttcaaccaacttttacttacttttgttacac 109  Q
    ||||||||||| |||||| ||||  |||||| ||| |||||| ||||||||||||||| ||||||||||||||| |||||||||||||||| ||||||||    
T  20964562 aagggaggtaa-ctactcatatagaacaatagggggttcatcagcttaatcattcttcgcaaatcatctttcaaacaacttttacttacttctgttacac 20964660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 137 - 254
Target Start/End: Complemental strand, 45960628 - 45960512
Alignment:
Q  137 aaatttacacctcctagatattaactttattgctaagttgagattaacacagtcctcgtggatacgaacttattttattacttcgatagt-tttagtaca 235  Q
    |||||||||| |||||||||||||| |||||||||| ||||||||||||||||||||||||  ||||  |  ||||| |||||||||||| ||| |||||    
T  45960628 aaatttacacatcctagatattaacgttattgctaaattgagattaacacagtcctcgtgggaacga--tatttttactacttcgatagtatttggtaca 45960531  T
Q  236 cttgctaaaatatctatca 254  Q
    ||||| ||||| |||||||    
T  45960530 cttgccaaaatttctatca 45960512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 154 - 245
Target Start/End: Complemental strand, 21018323 - 21018230
Alignment:
Q  154 atattaactttattgctaagttgagattaacacagtcctcgtggatacgaacttattttattacttcgat--agttttagtacacttgctaaaa 245  Q
    ||||| ||||||||| ||| ||||| ||||||||||||||||||||||||||||||||||||||||||||  | ||||||||||| || |||||    
T  21018323 atatttactttattgttaaattgaggttaacacagtcctcgtggatacgaacttattttattacttcgatgcatttttagtacacctgttaaaa 21018230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 137 - 255
Target Start/End: Complemental strand, 37183747 - 37183630
Alignment:
Q  137 aaatttacacctcctagatattaactttattgctaagttgagattaacacagtcctcgtggatacgaacttattttattacttcgatagt-tttagtaca 235  Q
    |||||||||| |||||||||||||| |||||||||| ||||||||||||||||||||||||| |   | |  ||||| |||||||||||| | | |||||    
T  37183747 aaatttacacatcctagatattaacattattgctaaattgagattaacacagtcctcgtggaaa--taatatttttactacttcgatagtatatggtaca 37183650  T
Q  236 cttgctaaaatatctatcat 255  Q
    ||||| ||||||||||||||    
T  37183649 cttgccaaaatatctatcat 37183630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 116 - 197
Target Start/End: Original strand, 20399072 - 20399154
Alignment:
Q  116 ctactgcctcagacacttata-aaatttacacctcctagatattaactttattgctaagttgagattaacacagtcctcgtgg 197  Q
    |||||||||||| |||| | | |||||||||| ||||||||||||||||||||||||| |||||||||||||||| |||||||    
T  20399072 ctactgcctcaggcactaaaagaaatttacacatcctagatattaactttattgctaaattgagattaacacagttctcgtgg 20399154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 10 - 83
Target Start/End: Original strand, 49716478 - 49716551
Alignment:
Q  10 aagggaggtaaactactcgtataagacaatacgggattcatcggcttaatcattcttctcaaatcatctttcaa 83  Q
    |||||||||||||||||| ||||  |||||| ||||||||||||||||||||||| |||| |||||||||||||    
T  49716478 aagggaggtaaactactcatatagaacaataggggattcatcggcttaatcattcatctccaatcatctttcaa 49716551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 10 - 83
Target Start/End: Original strand, 49719960 - 49720033
Alignment:
Q  10 aagggaggtaaactactcgtataagacaatacgggattcatcggcttaatcattcttctcaaatcatctttcaa 83  Q
    |||||||||||||||||| ||||  |||||| ||||||||||||||||||||||| |||| |||||||||||||    
T  49719960 aagggaggtaaactactcatatagaacaataggggattcatcggcttaatcattcatctccaatcatctttcaa 49720033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 137 - 254
Target Start/End: Complemental strand, 23021803 - 23021687
Alignment:
Q  137 aaatttacacctcctagatattaactttattgctaagttgagattaacacagtcctcgtggatacgaacttattttattacttcgatagt-tttagtaca 235  Q
    ||||||| || ||||| ||||| |||| |||||||| |||||||||||| ||||||| |||  ||||  |  ||||| |||||||||||| |||||||||    
T  23021803 aaatttatacatcctaaatatttacttgattgctaaattgagattaacagagtcctcatgggaacga--tatttttactacttcgatagtatttagtaca 23021706  T
Q  236 cttgctaaaatatctatca 254  Q
    |||||||||||||||||||    
T  23021705 cttgctaaaatatctatca 23021687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 137 - 254
Target Start/End: Complemental strand, 49498384 - 49498268
Alignment:
Q  137 aaatttacacctcctagatattaactttattgctaagttgagattaacacagtcctcgtggatacgaacttattttattacttcgatagt-tttagtaca 235  Q
    |||||||||| ||||| ||||| || |||||||||| |||||||||||||| |||||||||  ||||  |  ||||| |||||||| ||| ||||||||     
T  49498384 aaatttacacatcctaaatatttaccttattgctaaattgagattaacacaatcctcgtgggaacga--tatttttactacttcgacagtatttagtacg 49498287  T
Q  236 cttgctaaaatatctatca 254  Q
    |||||||||||||||||||    
T  49498286 cttgctaaaatatctatca 49498268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 138 - 254
Target Start/End: Complemental strand, 6070840 - 6070725
Alignment:
Q  138 aatttacacctcctagatattaactttattgctaagttgagattaacacagtcctcgtggatacgaacttattttattacttcgata-gttttagtacac 236  Q
    |||||| || ||||| ||||| |||||||| |||| |||||||||||||| |||| ||||  ||||  |  |||||||||||||||| |||||| |||||    
T  6070840 aatttatacatcctaaatatttactttatttctaaattgagattaacacaatccttgtgggaacga--tgtttttattacttcgatacgttttattacac 6070743  T
Q  237 ttgctaaaatatctatca 254  Q
    ||||||||||||||||||    
T  6070742 ttgctaaaatatctatca 6070725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 154 - 245
Target Start/End: Complemental strand, 1950312 - 1950222
Alignment:
Q  154 atattaactttattgctaagttgagattaacacagtcctcgtggatacgaacttattttattacttcgatagt-tttagtacacttgctaaaa 245  Q
    ||||| ||||||||||||| ||||||||||||||||||||||||  ||||  |  ||||| |||||||||||| |||||||||||||||||||    
T  1950312 atatttactttattgctaaattgagattaacacagtcctcgtgggaacga--tatttttactacttcgatagtatttagtacacttgctaaaa 1950222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 138 - 248
Target Start/End: Original strand, 45941668 - 45941779
Alignment:
Q  138 aatttacacctcctagatattaactttattgctaagttgagattaacacagtcctcgtggatacgaacttattttattacttcgat--agttttagtaca 235  Q
    |||||| || ||||| ||||| |||||||| |||| ||||||||||||||||||| ||||  ||||  || |||||||||||||||  | ||||||||||    
T  45941668 aatttatacatcctaaatatttactttatttctaaattgagattaacacagtccttgtgggaacgatatt-ttttattacttcgatacatttttagtaca 45941766  T
Q  236 cttgctaaaatat 248  Q
    |||||||||||||    
T  45941767 cttgctaaaatat 45941779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 160 - 254
Target Start/End: Original strand, 20448096 - 20448189
Alignment:
Q  160 actttattgctaagttgagattaacacagtcctcgtggatacgaacttattttattacttcgatagt-tttagtacacttgctaaaatatctatca 254  Q
    ||||||||||||| ||||||||||||||||||| ||||  ||||  |  ||||| |||||||||||| |||||||||||||||||| |||||||||    
T  20448096 actttattgctaaattgagattaacacagtccttgtgggaacga--tatttttactacttcgatagtatttagtacacttgctaaagtatctatca 20448189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 160 - 254
Target Start/End: Original strand, 20533863 - 20533956
Alignment:
Q  160 actttattgctaagttgagattaacacagtcctcgtggatacgaacttattttattacttcgatagt-tttagtacacttgctaaaatatctatca 254  Q
    ||||||||||||| ||||||||||||||||||| ||||  ||||  |  ||||| |||||||||||| |||||||||||||||||| |||||||||    
T  20533863 actttattgctaaattgagattaacacagtccttgtgggaacga--tatttttactacttcgatagtatttagtacacttgctaaagtatctatca 20533956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 137 - 254
Target Start/End: Original strand, 31205078 - 31205194
Alignment:
Q  137 aaatttacacctcctagatattaactttattgctaagttgagattaacacagtcctcgtggatacgaacttattttattacttcgatagt-tttagtaca 235  Q
    |||||||||  || ||||||| ||| |||||||||| ||||||||||||||||||||||||  ||||  |  ||||| |||||| ||||| ||| |||||    
T  31205078 aaatttacaaatcatagatataaacgttattgctaaattgagattaacacagtcctcgtgggaacga--tatttttactacttcaatagtatttggtaca 31205175  T
Q  236 cttgctaaaatatctatca 254  Q
    ||||| |||||||||||||    
T  31205176 cttgccaaaatatctatca 31205194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 10 - 106
Target Start/End: Complemental strand, 24200256 - 24200160
Alignment:
Q  10 aagggaggtaaactactcgtataagacaatacgggattcatcggcttaatcattcttctcaaatcatc-tttcaaccaacttttacttacttttgtta 106  Q
    |||||||||||  ||||| ||||  |||||| |||||||||||||||||||||||||||  ||||||| |||||| |||| |||| ||||||||||||    
T  24200256 aagggaggtaat-tactcatatagaacaataggggattcatcggcttaatcattcttctttaatcatcttttcaaacaacctttatttacttttgtta 24200160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 176 - 244
Target Start/End: Complemental strand, 27331619 - 27331550
Alignment:
Q  176 gagattaacacagtcctcgtggatacgaactt-attttattacttcgatagttttagtacacttgctaaa 244  Q
    ||||||||||| ||||||||||| | |||||| ||| |||||||||||||||||||| ||||||||||||    
T  27331619 gagattaacacggtcctcgtggaaatgaactttattatattacttcgatagttttaggacacttgctaaa 27331550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 116 - 197
Target Start/End: Complemental strand, 3796731 - 3796650
Alignment:
Q  116 ctactgcctcagacacttataaaatttacacctcctagatattaactttattgctaagttgagattaacacagtcctcgtgg 197  Q
    |||||||||||  |||| | | ||||||||| ||||| |||||||  |||||||| | ||||||||||||||||||||||||    
T  3796731 ctactgcctcatgcactaaaataatttacacatcctaaatattaaacttattgctgaattgagattaacacagtcctcgtgg 3796650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 166 - 254
Target Start/End: Complemental strand, 34552525 - 34552438
Alignment:
Q  166 ttgctaagttgagattaaca-cagtcctcgtggatacgaacttattttattacttcgatagttttagtacacttgctaaaatatctatca 254  Q
    ||||||||| || ||||||| | |||||||||||||||||||| | ||| ||||||||||||||| ||||||||| | ||||||||||||    
T  34552525 ttgctaagtagaaattaacaacggtcctcgtggatacgaactt-tattactacttcgatagttttggtacacttg-tcaaatatctatca 34552438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 174 - 255
Target Start/End: Complemental strand, 11666841 - 11666759
Alignment:
Q  174 ttgagattaacacagtcctcgtggatacgaactt--attttattacttcgatagttttagtacacttgctaaaatatctatcat 255  Q
    |||| |||| ||| ||||| ||||| ||||||||  |||||||||||||||||||||| ||| ||||||||||| |||||||||    
T  11666841 ttgatattatcacggtccttgtggaaacgaactttaattttattacttcgatagttttggtagacttgctaaaa-atctatcat 11666759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 116 - 240
Target Start/End: Complemental strand, 23441176 - 23441053
Alignment:
Q  116 ctactgcctcagacacttataaaatttacacctcctagatattaactttattgctaagttgagattaacacagtcctcgtggatacgaacttattttatt 215  Q
    |||||||||||| |||| | | ||||||||| ||||| |||||||  ||||||| || |||| ||||||||||||| |||||  ||||  |  ||||| |    
T  23441176 ctactgcctcaggcactaaaataatttacacatcctaaatattaatcttattgccaaattgaaattaacacagtccccgtgggaacga--tatttttact 23441079  T
Q  216 acttcgatagtt-ttagtacacttgc 240  Q
    |||||||||||| || ||||||||||    
T  23441078 acttcgatagttattggtacacttgc 23441053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 188 - 254
Target Start/End: Complemental strand, 32505921 - 32505857
Alignment:
Q  188 gtcctcgtggatacgaacttattttattacttcgatagttttagtacacttgctaaaatatctatca 254  Q
    |||||||||||||||| ||||||| ||||||||||||||||| || |||||||  ||||||||||||    
T  32505921 gtcctcgtggatacgatcttattt-attacttcgatagttttggttcacttgc-caaatatctatca 32505857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 191 - 244
Target Start/End: Original strand, 6206184 - 6206236
Alignment:
Q  191 ctcgtggatacgaacttattttattacttcgatagttttagtacacttgctaaa 244  Q
    ||||||||||||||||| | ||| |||||||||| |||||||||||||||||||    
T  6206184 ctcgtggatacgaactt-tattactacttcgataattttagtacacttgctaaa 6206236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 185 - 229
Target Start/End: Complemental strand, 16190246 - 16190203
Alignment:
Q  185 acagtcctcgtggatacgaacttattttattacttcgatagtttt 229  Q
    |||||||||||||||||||| ||| ||||||||||||||||||||    
T  16190246 acagtcctcgtggatacgaattta-tttattacttcgatagtttt 16190203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 166 - 229
Target Start/End: Original strand, 49716647 - 49716710
Alignment:
Q  166 ttgctaagttgagattaaca-cagtcctcgtggatacgaacttattttattacttcgatagtttt 229  Q
    ||||||||| || ||||||| | |||||||||||||||||||| | |||||||||||||||||||    
T  49716647 ttgctaagtagaaattaacaacggtcctcgtggatacgaactt-tattattacttcgatagtttt 49716710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 166 - 229
Target Start/End: Original strand, 49720129 - 49720192
Alignment:
Q  166 ttgctaagttgagattaaca-cagtcctcgtggatacgaacttattttattacttcgatagtttt 229  Q
    ||||||||| || ||||||| | |||||||||||||||||||| | |||||||||||||||||||    
T  49720129 ttgctaagtagaaattaacaacggtcctcgtggatacgaactt-tattattacttcgatagtttt 49720192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 188 - 239
Target Start/End: Original strand, 13496168 - 13496218
Alignment:
Q  188 gtcctcgtggatacgaacttattttattacttcgatagttttagtacacttg 239  Q
    ||||||||||||||||| |||||| ||||||||||||||||| || ||||||    
T  13496168 gtcctcgtggatacgaatttattt-attacttcgatagttttggttcacttg 13496218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 138 - 209
Target Start/End: Complemental strand, 34732242 - 34732171
Alignment:
Q  138 aatttacacctcctagatattaactttattgctaagttgagattaacacagtcctcgtggatacgaacttat 209  Q
    ||||||||| ||||| |||||| | |||||| ||| |||||||||||||||||   |||||||| |||||||    
T  34732242 aatttacacatcctatatattagccttattgttaaattgagattaacacagtctctgtggatacaaacttat 34732171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 42 - 71
Target Start/End: Complemental strand, 16838915 - 16838886
Alignment:
Q  42 gggattcatcggcttaatcattcttctcaa 71  Q
    ||||||||||||||||||||||||||||||    
T  16838915 gggattcatcggcttaatcattcttctcaa 16838886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 42 - 71
Target Start/End: Complemental strand, 16848845 - 16848816
Alignment:
Q  42 gggattcatcggcttaatcattcttctcaa 71  Q
    ||||||||||||||||||||||||||||||    
T  16848845 gggattcatcggcttaatcattcttctcaa 16848816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 174 - 244
Target Start/End: Original strand, 7635923 - 7635995
Alignment:
Q  174 ttgagattaacacagtcctcgtggatacgaactt-attttattacttcgatagtttt-agtacacttgctaaa 244  Q
    ||||||||||||| ||||| || || || ||||| ||| |||||||| ||||||||| |||||||||||||||    
T  7635923 ttgagattaacacggtccttgtagaaacaaactttattatattactttgatagtttttagtacacttgctaaa 7635995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 166 - 240
Target Start/End: Original strand, 18392669 - 18392744
Alignment:
Q  166 ttgctaagttgagattaaca-cagtcctcgtggatacgaacttattttattacttcgatag-ttttagtacacttgc 240  Q
    ||||||||| || ||||||| | |||||||||||||||||||| | ||| ||||||||||| |||| ||||||||||    
T  18392669 ttgctaagtagaaattaacaacggtcctcgtggatacgaactt-tattactacttcgatagcttttggtacacttgc 18392744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 138 - 255
Target Start/End: Complemental strand, 30938445 - 30938327
Alignment:
Q  138 aatttacacctcctagatattaactttattgctaagttgagattaacacagtcctcgtggatacgaactta--ttttattacttcgatagttttagtaca 235  Q
    ||||||||| ||||||||| |||| |||||| |||  | |||||||| || || |  | |||| |||||||  |||||||||||| ||||  ||||||||    
T  30938445 aatttacacatcctagatagtaaccttattgttaatctaagattaacgcaatctttatagatatgaacttaatttttattacttcaatagaattagtaca 30938346  T
Q  236 cttgctaaaatatctatcat 255  Q
    ||| || |||||||||||||    
T  30938345 cttact-aaatatctatcat 30938327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1063 (Bit Score: 75; Significance: 3e-34; HSPs: 1)
Name: scaffold1063
Description:

Target: scaffold1063; HSP #1
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 138 - 245
Target Start/End: Original strand, 2737 - 2846
Alignment:
Q  138 aatttacacctcctagatattaactttattgctaagttgagattaacacagtcctcgtggatacgaacttattttattacttcgat--agttttagtaca 235  Q
    |||||| || ||||| ||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||  | ||||||||||    
T  2737 aatttatacatcctaaatatttactttattgctaaattgagattaacacagtcctcgtggatacgaacttattttattacttcgatgcatttttagtaca 2836  T
Q  236 cttgctaaaa 245  Q
    ||||||||||    
T  2837 cttgctaaaa 2846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015 (Bit Score: 75; Significance: 3e-34; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 148 - 255
Target Start/End: Original strand, 198404 - 198513
Alignment:
Q  148 tcctagatattaactttattgctaagttgagattaacacagtcctcgtggatacgaacttattttattacttcgat--agttttagtacacttgctaaaa 245  Q
    ||||| ||||| ||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||| |||  | ||||||||||||||||||||    
T  198404 tcctaaatatttactttattgctaaattgaaattaacacagtcctcgtggatacgaacttattttattactttgatgcatttttagtacacttgctaaaa 198503  T
Q  246 tatctatcat 255  Q
    ||||||||||    
T  198504 tatctatcat 198513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 74; Significance: 1e-33; HSPs: 2)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 137 - 252
Target Start/End: Complemental strand, 118331 - 118214
Alignment:
Q  137 aaatttacacctcctagatattaactttattgctaagttgagattaacacagtcctcgtggatacgaactta-ttttattacttcgatag-ttttagtac 234  Q
    |||||||||| ||||||||| ||||||||||| | | |||||||||||||| |||||||||||||||||||| ||||||||||||||||| |||||||||    
T  118331 aaatttacacatcctagataataactttattgttgaattgagattaacacaatcctcgtggatacgaacttatttttattacttcgatagtttttagtac 118232  T
Q  235 acttgctaaaatatctat 252  Q
    ||||| ||||||||||||    
T  118231 acttgttaaaatatctat 118214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002; HSP #2
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 137 - 245
Target Start/End: Complemental strand, 99117 - 99007
Alignment:
Q  137 aaatttacacctcctagatattaactttattgctaagttgagattaacacagtcctcgtggatacgaactta-ttttattacttcgat-agttttagtac 234  Q
    |||||||||| || |||||| ||||||||||||||| |||||||||||||  ||||||| |||||||| ||| ||||||||||||||| | |||||||||    
T  99117 aaatttacacatcatagataataactttattgctaaattgagattaacaccatcctcgtagatacgaaattatttttattacttcgataatttttagtac 99018  T
Q  235 acttgctaaaa 245  Q
    |||||||||||    
T  99017 acttgctaaaa 99007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold2073 (Bit Score: 72; Significance: 2e-32; HSPs: 1)
Name: scaffold2073
Description:

Target: scaffold2073; HSP #1
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 138 - 254
Target Start/End: Complemental strand, 747 - 627
Alignment:
Q  138 aatttacacctcctagatattaactttattgctaagttgagattaacacagtcctcgtggatacgaactt----attttattacttcgatagttttagta 233  Q
    ||||||||| |||||||||||||| |||||||||| ||||||||||||||||||  ||||||||||||||    ||||||| ||||||||||||||||||    
T  747 aatttacacatcctagatattaaccttattgctaaattgagattaacacagtccctgtggatacgaacttgtaaattttatcacttcgatagttttagta 648  T
Q  234 cacttgctaaaatatctatca 254  Q
    ||||||||||||  |||||||    
T  647 cacttgctaaaaagtctatca 627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0757 (Bit Score: 69; Significance: 1e-30; HSPs: 1)
Name: scaffold0757
Description:

Target: scaffold0757; HSP #1
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 148 - 245
Target Start/End: Original strand, 5612 - 5711
Alignment:
Q  148 tcctagatattaactttattgctaagttgagattaacacagtcctcgtggatacgaacttattttattacttcgat--agttttagtacacttgctaaaa 245  Q
    ||||| ||||| |||||||| |||| |||||||||| |||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||    
T  5612 tcctaaatatttactttattactaaattgagattaaaacagtcctcgtggatacgaacttattttattacttcgatgcagttttagtacacttgctaaaa 5711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0520 (Bit Score: 67; Significance: 2e-29; HSPs: 2)
Name: scaffold0520
Description:

Target: scaffold0520; HSP #1
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 138 - 245
Target Start/End: Complemental strand, 1421 - 1312
Alignment:
Q  138 aatttacacctcctagatattaactttattgctaagttgagattaacacagtcctcgtggatacgaacttattttattacttcgat--agttttagtaca 235  Q
    |||||| || ||||| ||||| ||||||||||||| |||||||||||| |||||||||||| ||||||||||||||||||||||||  | ||||||||||    
T  1421 aatttatacgtcctaaatatttactttattgctaaattgagattaacagagtcctcgtggacacgaacttattttattacttcgatgcatttttagtaca 1322  T
Q  236 cttgctaaaa 245  Q
    ||||||||||    
T  1321 cttgctaaaa 1312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0520; HSP #2
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 138 - 190
Target Start/End: Complemental strand, 8091 - 8039
Alignment:
Q  138 aatttacacctcctagatattaactttattgctaagttgagattaacacagtc 190  Q
    |||||| || ||||| ||||| ||||||||||||| |||||||||||||||||    
T  8091 aatttatacatcctaaatatttactttattgctaaattgagattaacacagtc 8039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0233 (Bit Score: 58; Significance: 4e-24; HSPs: 1)
Name: scaffold0233
Description:

Target: scaffold0233; HSP #1
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 134 - 254
Target Start/End: Original strand, 10176 - 10296
Alignment:
Q  134 ataaaatttacacctcctagatattaactttattgctaagttgagattaacacagtcctcgtggatacgaactta-ttttattacttcgatagttttagt 232  Q
    ||||| ||||||| ||||| ||| ||||  ||||||||| |||||||||| | |||||||||||| || |||||| ||||||||||| ||||||||||||    
T  10176 ataaactttacacatcctatataataaccatattgctaaattgagattaatagagtcctcgtggaaacaaacttatttttattactttgatagttttagt 10275  T
Q  233 acacttgctaaaatatctatca 254  Q
    ||||||||| ||||||||||||    
T  10276 acacttgct-aaatatctatca 10296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1755 (Bit Score: 54; Significance: 9e-22; HSPs: 1)
Name: scaffold1755
Description:

Target: scaffold1755; HSP #1
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 138 - 219
Target Start/End: Original strand, 383 - 464
Alignment:
Q  138 aatttacacctcctagatattaactttattgctaagttgagattaacacagtcctcgtggatacgaacttattttattactt 219  Q
    |||||| || ||||| ||||| ||| ||||||||| |||||||||||||||||||||||||||| |||||||||||||||||    
T  383 aatttatacatcctaaatatttactatattgctaaattgagattaacacagtcctcgtggatacaaacttattttattactt 464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0412 (Bit Score: 54; Significance: 9e-22; HSPs: 1)
Name: scaffold0412
Description:

Target: scaffold0412; HSP #1
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 137 - 254
Target Start/End: Original strand, 371 - 491
Alignment:
Q  137 aaatttacacctcctagatattaactttattgctaagttgagattaacacagtcctcgtggatacg--aacttattttattacttcgatagt-tttagta 233  Q
    |||||||||| |||||||||||||| |||||||||| ||||||||||||||||||||||||  |||  |  || ||||| |||||| ||||| ||| |||    
T  371 aaatttacacatcctagatattaacgttattgctaaattgagattaacacagtcctcgtgggaacgatatttttttttactacttcaatagtatttggta 470  T
Q  234 cacttgctaaaatatctatca 254  Q
    ||||||| |||||||||||||    
T  471 cacttgccaaaatatctatca 491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 54; Significance: 9e-22; HSPs: 2)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 154 - 223
Target Start/End: Original strand, 248786 - 248855
Alignment:
Q  154 atattaactttattgctaagttgagattaacacagtcctcgtggatacgaacttattttattacttcgat 223  Q
    ||||| ||||||||||||| ||||||| ||||||||||||||||| ||||||||||||||||||||||||    
T  248786 atatttactttattgctaaattgagatcaacacagtcctcgtggacacgaacttattttattacttcgat 248855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007; HSP #2
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 138 - 240
Target Start/End: Original strand, 92679 - 92781
Alignment:
Q  138 aatttacacctcctagatattaa-ctttattgctaagttgagattaacacagtcctcgtggatacgaacttattttattacttcgatagtt-ttagtaca 235  Q
    ||||||||| ||||| ||| ||| ||||||||| ||||||||| |||||||||||||||||  ||||  |  ||||| ||||||||||||| || |||||    
T  92679 aatttacacatcctaaataataaactttattgccaagttgagaataacacagtcctcgtgggaacga--tatttttactacttcgatagttattggtaca 92776  T
Q  236 cttgc 240  Q
    |||||    
T  92777 cttgc 92781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 51; Significance: 6e-20; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 138 - 254
Target Start/End: Original strand, 293259 - 293374
Alignment:
Q  138 aatttacacctcctagatattaactttattgctaagttgagattaacacagtcctcgtggatacgaacttattttattacttcgatagt-tttagtacac 236  Q
    |||||| || ||||| ||||| |||||||| |||| ||||||||||||||||||||||||  ||  | |  ||||| |||||||||||| ||||||||||    
T  293259 aatttatacatcctaaatatttactttatttctaaattgagattaacacagtcctcgtgggaac--aatatttttactacttcgatagtatttagtacac 293356  T
Q  237 ttgctaaaatatctatca 254  Q
    ||||||||||||||||||    
T  293357 ttgctaaaatatctatca 293374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0381 (Bit Score: 49; Significance: 9e-19; HSPs: 1)
Name: scaffold0381
Description:

Target: scaffold0381; HSP #1
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 116 - 254
Target Start/End: Complemental strand, 5303 - 5166
Alignment:
Q  116 ctactgcctcagacacttataaaatttacacctcctagatattaactttattgctaagttgagattaacacagtcctcgtggatacgaacttattttatt 215  Q
    |||||||||||| |||| | | |||||| || ||||| ||||| |||||||| |||| ||||||||||||||||||||||||  ||||  |  ||||| |    
T  5303 ctactgcctcaggcactaaaataatttatacatcctaaatatttactttatttctaaattgagattaacacagtcctcgtggtaacga--tatttttact 5206  T
Q  216 acttcgatagt-tttagtacacttgctaaaatatctatca 254  Q
    |||||||| || |||||| |||||||||||| ||||||||    
T  5205 acttcgatggtatttagtgcacttgctaaaaaatctatca 5166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0250 (Bit Score: 48; Significance: 3e-18; HSPs: 1)
Name: scaffold0250
Description:

Target: scaffold0250; HSP #1
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 137 - 254
Target Start/End: Original strand, 19636 - 19752
Alignment:
Q  137 aaatttacacctcctagatattaactttattgctaagttgagattaacacagtcctcgtggatacgaacttattttattacttcgatagt-tttagtaca 235  Q
    |||||||| | ||||| |||||||| ||| |||||| ||||||||||||||||||||||||  ||||  |  ||||| |||||||||||| ||| |||||    
T  19636 aaatttacgcatcctaaatattaacgttactgctaaattgagattaacacagtcctcgtgggaacga--tatttttactacttcgatagtatttggtaca 19733  T
Q  236 cttgctaaaatatctatca 254  Q
    ||||| |||||||||||||    
T  19734 cttgccaaaatatctatca 19752  T

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Target: scaffold1809 (Bit Score: 45; Significance: 2e-16; HSPs: 1)
Name: scaffold1809
Description:

Target: scaffold1809; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 148 - 245
Target Start/End: Original strand, 325 - 423
Alignment:
Q  148 tcctagatattaactttattgctaagttgagattaacacagtcctcgtggatacgaacttattttattacttcgat--agttttagtacacttgctaaaa 245  Q
    ||||| ||||| ||||||||||||| |||||||||||||||| ||  || |||| |||||||||||||| ||||||  | ||||||||||||||||||||    
T  325 tcctaaatatttactttattgctaaattgagattaacacagttct-ttgaatacaaacttattttattatttcgatgcatttttagtacacttgctaaaa 423  T

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Target: scaffold1785 (Bit Score: 44; Significance: 8e-16; HSPs: 1)
Name: scaffold1785
Description:

Target: scaffold1785; HSP #1
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 154 - 254
Target Start/End: Original strand, 168 - 271
Alignment:
Q  154 atattaactttattgctaagttgagattaacacagtcctcgtggatacga-actta-ttttattacttcgatagt-tttagtacacttgctaaaatatct 250  Q
    ||||| ||||||||||||| ||||||||||||||||||||||||  | || |  || ||||| |||||||||||| ||||||||||||||||||| ||||    
T  168 atatttactttattgctaaattgagattaacacagtcctcgtgggaatgatagatatttttactacttcgatagtatttagtacacttgctaaaaaatct 267  T
Q  251 atca 254  Q
    ||||    
T  268 atca 271  T

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Target: scaffold0175 (Bit Score: 44; Significance: 8e-16; HSPs: 1)
Name: scaffold0175
Description:

Target: scaffold0175; HSP #1
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 10 - 116
Target Start/End: Complemental strand, 28671 - 28565
Alignment:
Q  10 aagggaggtaaactactcgtataagacaatacgggattcatcggcttaatcattcttctcaaatca-tctttcaaccaacttttacttacttttgttaca 108  Q
    ||||||||||| |||||| ||||  ||| || ||||||||||||||||||||||||||||  |||| | |||||| ||||||| | ||||||||||||||    
T  28671 aagggaggtaa-ctactcatatagaacagtaggggattcatcggcttaatcattcttctctgatcattttttcaaacaactttcatttacttttgttaca 28573  T
Q  109 cttaaatc 116  Q
    || |||||    
T  28572 ctcaaatc 28565  T

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Target: scaffold0035 (Bit Score: 44; Significance: 8e-16; HSPs: 1)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 154 - 254
Target Start/End: Original strand, 62778 - 62881
Alignment:
Q  154 atattaactttattgctaagttgagattaacacagtcctcgtggatacga-actta-ttttattacttcgatagt-tttagtacacttgctaaaatatct 250  Q
    ||||| ||||||||||||| ||||||||||||||||||||||||  | || |  || ||||| |||||||||||| ||||||||||||||||||| ||||    
T  62778 atatttactttattgctaaattgagattaacacagtcctcgtgggaatgatagatatttttactacttcgatagtatttagtacacttgctaaaaaatct 62877  T
Q  251 atca 254  Q
    ||||    
T  62878 atca 62881  T

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Target: scaffold0962 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 1)
Name: scaffold0962
Description:

Target: scaffold0962; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 174 - 254
Target Start/End: Complemental strand, 3127 - 3048
Alignment:
Q  174 ttgagattaacacagtcctcgtggatacgaacttattttattacttcgatagt-tttagtacacttgctaaaatatctatca 254  Q
    ||||||||||||||||||||||||  ||||  |  ||||| |||||||||||| ||||||||||||||||||||||||||||    
T  3127 ttgagattaacacagtcctcgtgggaacga--tatttttactacttcgatagtatttagtacacttgctaaaatatctatca 3048  T

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Target: scaffold0012 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 10 - 106
Target Start/End: Complemental strand, 26890 - 26794
Alignment:
Q  10 aagggaggtaaactactcgtataagacaatacgggattcatcggcttaatcattcttctcaaatcatc-tttcaaccaacttttacttacttttgtta 106  Q
    |||||||||||  ||||| ||||  |||||| | |||||||||||||||||||||||||  ||||||| |||||| |||| |||||||||||||||||    
T  26890 aagggaggtaat-tactcatatagaacaatatgagattcatcggcttaatcattcttctttaatcatcttttcaaacaacctttacttacttttgtta 26794  T

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Target: scaffold0427 (Bit Score: 41; Significance: 0.00000000000005; HSPs: 1)
Name: scaffold0427
Description:

Target: scaffold0427; HSP #1
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 163 - 253
Target Start/End: Complemental strand, 3643 - 3554
Alignment:
Q  163 ttattgctaagttgagattaacacagtcctcgtggatacgaacttattttattacttcgatagt-tttagtacacttgctaaaatatctatc 253  Q
    ||||| |||| |||||||||||||||||||||||   ||||  ||  ||||||||||| ||||| |||||||||||||||||||||||||||    
T  3643 ttattactaaattgagattaacacagtcctcgtgagaacgatatt--tttattacttcaatagtatttagtacacttgctaaaatatctatc 3554  T

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Target: scaffold1048 (Bit Score: 38; Significance: 0.000000000003; HSPs: 1)
Name: scaffold1048
Description:

Target: scaffold1048; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 42 - 106
Target Start/End: Original strand, 1538 - 1603
Alignment:
Q  42 gggattcatcggcttaatcattcttctcaaatcatc-tttcaaccaacttttacttacttttgtta 106  Q
    |||||||||||||||||||||||||||  ||||||| |||||| ||||||||| || |||||||||    
T  1538 gggattcatcggcttaatcattcttctttaatcatcttttcaaacaacttttatttgcttttgtta 1603  T

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Target: scaffold0690 (Bit Score: 38; Significance: 0.000000000003; HSPs: 1)
Name: scaffold0690
Description:

Target: scaffold0690; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 137 - 254
Target Start/End: Complemental strand, 7594 - 7481
Alignment:
Q  137 aaatttacacctcctagatattaactttattgctaagttgagattaacacagtcctcgtggatacgaacttattttattacttcgatagt-tttagtaca 235  Q
    ||||||| || ||||| ||||| |||||||| |||| ||||||||||||||||||||    ||| ||||  |  ||| |||||||||||| |||||||||    
T  7594 aaatttatacatcctaaatatttactttatttctaaattgagattaacacagtcctc----ataggaac-gacattactacttcgatagtatttagtaca 7500  T
Q  236 cttgctaaaatatctatca 254  Q
    |||||||||| ||||||||    
T  7499 cttgctaaaaaatctatca 7481  T

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Target: scaffold1208 (Bit Score: 34; Significance: 0.0000000008; HSPs: 1)
Name: scaffold1208
Description:

Target: scaffold1208; HSP #1
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 154 - 245
Target Start/End: Original strand, 440 - 530
Alignment:
Q  154 atattaactttattgctaagttgagattaacacagtcctcgtggatacgaacttattttattacttcgatagt-tttagtacacttgctaaaa 245  Q
    ||||| |||||||| |||| |||||||||||||||| |||||||  ||||  |  ||||| |||||||||||| |||||| ||||||||||||    
T  440 atatttactttatttctaaattgagattaacacagttctcgtgggaacga--tatttttactacttcgatagtatttagtgcacttgctaaaa 530  T

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Target: scaffold0068 (Bit Score: 34; Significance: 0.0000000008; HSPs: 1)
Name: scaffold0068
Description:

Target: scaffold0068; HSP #1
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 166 - 254
Target Start/End: Complemental strand, 33817 - 33730
Alignment:
Q  166 ttgctaagttgagattaaca-cagtcctcgtggatacgaacttattttattacttcgatagttttagtacacttgctaaaatatctatca 254  Q
    ||||||||| || ||||||| | |||||||||||||| ||||| | ||| ||||||||||||||| ||||||||||  ||||||||||||    
T  33817 ttgctaagtagaaattaacaacggtcctcgtggatacaaactt-tattactacttcgatagttttggtacacttgc-caaatatctatca 33730  T

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Target: scaffold0352 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0352
Description:

Target: scaffold0352; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 188 - 240
Target Start/End: Complemental strand, 2683 - 2632
Alignment:
Q  188 gtcctcgtggatacgaacttattttattacttcgatagttttagtacacttgc 240  Q
    |||||||||||||||| ||||||| ||||||||||||||||| || |||||||    
T  2683 gtcctcgtggatacgatcttattt-attacttcgatagttttggtccacttgc 2632  T

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Target: scaffold0116 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0116
Description:

Target: scaffold0116; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 279 - 323
Target Start/End: Complemental strand, 10929 - 10885
Alignment:
Q  279 atcctcgagaaaaccgaacatgtactcaataagaccctttcgttg 323  Q
    ||||||||| ||||||||||| |||||||| ||||||||||||||    
T  10929 atcctcgagcaaaccgaacatatactcaatgagaccctttcgttg 10885  T

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Target: scaffold0134 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0134
Description:

Target: scaffold0134; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 185 - 245
Target Start/End: Original strand, 7530 - 7596
Alignment:
Q  185 acagtcctcgtggatacgaactt----attttattacttcg--atagttttagtacacttgctaaaa 245  Q
    |||||||| ||||||||||||||    ||||||||||||||  ||| ||||||||||||||||||||    
T  7530 acagtccttgtggatacgaacttataaattttattacttcgatatatttttagtacacttgctaaaa 7596  T

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Target: scaffold0067 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0067
Description:

Target: scaffold0067; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 10 - 79
Target Start/End: Original strand, 27468 - 27536
Alignment:
Q  10 aagggaggtaaactactcgtataagacaatacgggattcatcggcttaatcattcttctcaaatcatctt 79  Q
    |||||||||||  ||||| ||||  |||||| |||||||||| ||||||||||||||||  |||||||||    
T  27468 aagggaggtaat-tactcatatagaacaataggggattcatcagcttaatcattcttctttaatcatctt 27536  T

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