View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15976_low_10 (Length: 506)
Name: NF15976_low_10
Description: NF15976
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15976_low_10 |
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Alignment Details
Target: chr7 (Bit Score: 434; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 434; E-Value: 0
Query Start/End: Original strand, 25 - 494
Target Start/End: Original strand, 39962639 - 39963108
Alignment:
| Q |
25 |
atttgtatttacgccaaaataagacttactcttttgaatcatttatcaaattctctatacatgccaggttatgaactggttcactccactgaatccaacc |
124 |
Q |
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| T |
39962639 |
atttgtatttacgccaaaataagacttactcttttgaatcatttattaaattctatatacatgccaggttatgaactggttcactccactgaatccaacc |
39962738 |
T |
|
| Q |
125 |
gattaccaaaaaggcatacttcttgcagatatcgccgcaaggaatggtggatttgatcacgtcgcagtgccactgccacatgattttgcaatctatctgc |
224 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
39962739 |
gattaccaaaaaggcatacttcttgcagatatcgccgcaaggaatggtggatttgatcacgtcgcagtgccactgccacatgattttgcaatctatctgc |
39962838 |
T |
|
| Q |
225 |
caggtcttatggaagcacttcatttaatttaaagtattcagcaactttagagaaattgtttaaaattgtttgttacttattacaaacattgtaaccaaag |
324 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||| ||||||||||||||||| |
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| T |
39962839 |
caggtcttatggaagcacttcatttaatttaaagtattcagcaacttaagagaaattgttttaaattgtttgttacttattaaaaacattgtaaccaaag |
39962938 |
T |
|
| Q |
325 |
tttaggtgtgttgctcatatttgtttctatttcaattacaaattcgtgtttaaaattatgttttcctcttcctcatgttgtcaggcaggactagatcacc |
424 |
Q |
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|||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
39962939 |
tttaggtgtgttgctcatatttatttctatttcaattacaaattcgtgtttaaaattatgttttcctcttcctcatgttgtcaggcaggactagatcacc |
39963038 |
T |
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| Q |
425 |
cgtaggtatggtagtgaacatgttttcatggtcttgcatcaaagcaatctcaacaaataaagttcatctc |
494 |
Q |
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|||||| ||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |
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| T |
39963039 |
cgtaggcatggtcgtgaacatgttttcatggtcttgcatcaaagcaacctcaacaaataaagttcatctc |
39963108 |
T |
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