View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15977_high_2 (Length: 245)
Name: NF15977_high_2
Description: NF15977
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15977_high_2 |
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Alignment Details
Target: chr2 (Bit Score: 226; Significance: 1e-125; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 226; E-Value: 1e-125
Query Start/End: Original strand, 1 - 234
Target Start/End: Original strand, 12305864 - 12306097
Alignment:
| Q |
1 |
acatgaagttctgctacaaaaacactgacttctttttatggatttcgatattcatgatttatacttcaatggagacagaagcttttcttttttatattca |
100 |
Q |
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| T |
12305864 |
acatgaagttatgctacaaaaacactgacttctttttatggatttcgatattcatgatttatacttcaatgaagacagaagcttttcttttttatattca |
12305963 |
T |
|
| Q |
101 |
atcgatgaagaaatgaagattactatagtttaaagcagttcttagtaacttcatacttcttattttaattggaatgttaacttggcacttgaattgttat |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
12305964 |
atcgatgaagaaatgaagattactatagtttaaagcagttcttagtaacttcatacttcttattttaattggaatgttaacttggcacttgaattgttat |
12306063 |
T |
|
| Q |
201 |
ttcttaggatattagcccctaccacatatatatt |
234 |
Q |
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|||||||||||||||||||||||||||||||||| |
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| T |
12306064 |
ttcttaggatattagcccctaccacatatatatt |
12306097 |
T |
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