View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF15978_high_5 (Length: 573)

Name: NF15978_high_5
Description: NF15978
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF15978_high_5
NF15978_high_5
[»] chr4 (48 HSPs)
chr4 (19-557)||(26199935-26200469)
chr4 (289-478)||(14572066-14572257)
chr4 (289-480)||(12691911-12692108)
chr4 (289-479)||(49998668-49998864)
chr4 (289-447)||(4127801-4127967)
chr4 (289-366)||(4185866-4185943)
chr4 (289-478)||(7678534-7678729)
chr4 (289-447)||(17628573-17628739)
chr4 (289-365)||(35871779-35871855)
chr4 (289-365)||(44470787-44470863)
chr4 (289-480)||(3169237-3169434)
chr4 (371-480)||(14571723-14571830)
chr4 (286-475)||(44471234-44471429)
chr4 (289-365)||(14571600-14571676)
chr4 (289-365)||(23350195-23350271)
chr4 (289-447)||(27026565-27026730)
chr4 (289-365)||(50814737-50814813)
chr4 (329-480)||(1464178-1464335)
chr4 (386-480)||(1645766-1645858)
chr4 (286-365)||(27578818-27578897)
chr4 (289-367)||(4127330-4127408)
chr4 (289-543)||(8467725-8467966)
chr4 (287-473)||(31817762-31817954)
chr4 (386-473)||(9423875-9423960)
chr4 (289-365)||(11828397-11828473)
chr4 (289-365)||(27578198-27578274)
chr4 (289-365)||(27578369-27578445)
chr4 (287-365)||(13266238-13266316)
chr4 (331-365)||(24628931-24628965)
chr4 (395-480)||(24629003-24629089)
chr4 (331-365)||(24629387-24629421)
chr4 (395-480)||(50398564-50398647)
chr4 (371-480)||(51331283-51331390)
chr4 (488-557)||(17028833-17028901)
chr4 (395-478)||(4127463-4127544)
chr4 (395-478)||(23976245-23976326)
chr4 (289-442)||(24271463-24271623)
chr4 (289-480)||(23942701-23942898)
chr4 (291-362)||(40607086-40607157)
chr4 (287-365)||(17029026-17029104)
chr4 (395-480)||(24629459-24629542)
chr4 (405-547)||(29628703-29628838)
chr4 (334-367)||(23091468-23091501)
chr4 (492-537)||(33987188-33987232)
chr4 (397-461)||(44470902-44470964)
chr4 (289-365)||(21067434-21067510)
chr4 (389-445)||(21220351-21220407)
chr4 (289-365)||(23943154-23943230)
[»] scaffold0005 (3 HSPs)
scaffold0005 (289-478)||(245119-245310)
scaffold0005 (371-480)||(245546-245653)
scaffold0005 (289-365)||(245700-245776)
[»] chr6 (29 HSPs)
chr6 (296-480)||(23986242-23986432)
chr6 (289-480)||(17027449-17027646)
chr6 (291-478)||(13191433-13191626)
chr6 (289-480)||(20850352-20850549)
chr6 (286-365)||(9352214-9352293)
chr6 (291-475)||(13492825-13493015)
chr6 (388-479)||(3652518-3652607)
chr6 (289-365)||(7912030-7912106)
chr6 (289-365)||(7912462-7912538)
chr6 (291-447)||(13492394-13492558)
chr6 (318-478)||(23776474-23776639)
chr6 (387-479)||(20126206-20126296)
chr6 (389-480)||(14771745-14771834)
chr6 (289-365)||(17731027-17731103)
chr6 (395-480)||(20896720-20896803)
chr6 (331-365)||(28780262-28780296)
chr6 (289-369)||(17205486-17205566)
chr6 (311-362)||(9440797-9440848)
chr6 (318-365)||(16520120-16520167)
chr6 (373-475)||(21312007-21312107)
chr6 (289-348)||(31416006-31416065)
chr6 (292-362)||(1991708-1991778)
chr6 (395-480)||(2681248-2681331)
chr6 (371-480)||(6330920-6331027)
chr6 (291-365)||(9440229-9440303)
chr6 (289-479)||(11062317-11062513)
chr6 (331-365)||(20896648-20896682)
chr6 (395-447)||(20735757-20735809)
chr6 (387-478)||(31821716-31821805)
[»] scaffold0322 (1 HSPs)
scaffold0322 (289-480)||(18997-19194)
[»] chr1 (41 HSPs)
chr1 (289-480)||(20057637-20057834)
chr1 (289-480)||(20054454-20054651)
chr1 (289-480)||(20054910-20055107)
chr1 (289-480)||(20055366-20055563)
chr1 (289-480)||(20055822-20056019)
chr1 (289-480)||(20056278-20056475)
chr1 (289-480)||(20057181-20057378)
chr1 (289-480)||(38340937-38341134)
chr1 (289-365)||(46693653-46693729)
chr1 (289-480)||(20845579-20845776)
chr1 (286-480)||(20053995-20054195)
chr1 (289-362)||(20056734-20056807)
chr1 (289-365)||(50002993-50003069)
chr1 (289-480)||(35759526-35759723)
chr1 (289-365)||(16451851-16451927)
chr1 (289-365)||(16461004-16461080)
chr1 (289-365)||(20060258-20060334)
chr1 (286-365)||(23180882-23180961)
chr1 (387-475)||(2328351-2328437)
chr1 (395-531)||(20061223-20061353)
chr1 (289-362)||(50002625-50002698)
chr1 (289-478)||(52250239-52250434)
chr1 (289-365)||(52250695-52250771)
chr1 (289-365)||(52251032-52251108)
chr1 (386-480)||(7548122-7548214)
chr1 (386-480)||(43057088-43057180)
chr1 (386-480)||(43057546-43057638)
chr1 (291-365)||(51372794-51372868)
chr1 (395-480)||(50002739-50002822)
chr1 (286-367)||(7229858-7229939)
chr1 (332-480)||(50002246-50002400)
chr1 (330-365)||(8278109-8278144)
chr1 (289-363)||(7547791-7547865)
chr1 (395-479)||(12728023-12728106)
chr1 (388-461)||(30872975-30873046)
chr1 (331-365)||(35760874-35760908)
chr1 (387-445)||(35760938-35760996)
chr1 (395-436)||(2634539-2634580)
chr1 (387-444)||(12883589-12883646)
chr1 (330-362)||(16907389-16907421)
chr1 (395-447)||(46693767-46693819)
[»] scaffold0243 (1 HSPs)
scaffold0243 (289-475)||(1256-1448)
[»] chr3 (46 HSPs)
chr3 (329-462)||(29224373-29224512)
chr3 (289-367)||(3899950-3900028)
chr3 (289-478)||(11179952-11180147)
chr3 (289-478)||(32227139-32227334)
chr3 (289-478)||(32227533-32227728)
chr3 (289-365)||(8067432-8067508)
chr3 (289-480)||(31284194-31284391)
chr3 (290-365)||(16811533-16811608)
chr3 (289-480)||(28561777-28561973)
chr3 (291-365)||(27187250-27187324)
chr3 (289-447)||(50347808-50347974)
chr3 (289-365)||(13150472-13150548)
chr3 (289-365)||(39653316-39653392)
chr3 (287-365)||(53150728-53150806)
chr3 (289-365)||(32386652-32386728)
chr3 (387-480)||(2911126-2911217)
chr3 (291-365)||(16811077-16811151)
chr3 (395-480)||(20885149-20885232)
chr3 (292-365)||(15377436-15377509)
chr3 (292-365)||(15405698-15405771)
chr3 (292-365)||(15417523-15417596)
chr3 (289-365)||(13150017-13150093)
chr3 (289-365)||(14814101-14814177)
chr3 (289-365)||(14820306-14820382)
chr3 (294-365)||(15388295-15388366)
chr3 (294-365)||(15392662-15392733)
chr3 (386-480)||(25230271-25230363)
chr3 (386-480)||(25237858-25237950)
chr3 (292-365)||(15411107-15411180)
chr3 (386-478)||(25230728-25230818)
chr3 (386-478)||(25238315-25238405)
chr3 (387-444)||(31103984-31104041)
chr3 (386-480)||(25239100-25239192)
chr3 (318-365)||(41472452-41472499)
chr3 (371-480)||(7493912-7494019)
chr3 (371-480)||(25803012-25803119)
chr3 (370-479)||(30529719-30529826)
chr3 (395-480)||(32386766-32386849)
chr3 (387-480)||(39640968-39641059)
chr3 (395-480)||(39653195-39653278)
chr3 (387-444)||(4067384-4067441)
chr3 (386-462)||(25238707-25238781)
chr3 (386-443)||(25248177-25248234)
chr3 (395-478)||(13150131-13150212)
chr3 (289-365)||(25248263-25248339)
chr3 (333-365)||(41474149-41474181)
[»] chr2 (31 HSPs)
chr2 (291-447)||(30963183-30963347)
chr2 (289-447)||(33771063-33771229)
chr2 (291-478)||(8256559-8256752)
chr2 (289-444)||(30961801-30961964)
chr2 (289-480)||(25337915-25338112)
chr2 (289-480)||(41754320-41754517)
chr2 (289-367)||(32377634-32377712)
chr2 (289-365)||(30966842-30966918)
chr2 (289-534)||(8073873-8074120)
chr2 (371-480)||(33174989-33175096)
chr2 (289-374)||(18875903-18875988)
chr2 (289-475)||(30966270-30966462)
chr2 (289-365)||(13191126-13191202)
chr2 (289-365)||(29259538-29259614)
chr2 (289-480)||(16379424-16379621)
chr2 (371-479)||(1707073-1707179)
chr2 (289-362)||(32377825-32377898)
chr2 (289-365)||(15639886-15639962)
chr2 (289-365)||(24818478-24818553)
chr2 (289-448)||(5399735-5399902)
chr2 (331-365)||(11388339-11388373)
chr2 (331-365)||(11394685-11394719)
chr2 (387-480)||(18098902-18098993)
chr2 (386-474)||(25434079-25434165)
chr2 (289-444)||(30963638-30963801)
chr2 (386-478)||(1912558-1912647)
chr2 (387-436)||(16379010-16379059)
chr2 (386-447)||(33174565-33174626)
chr2 (388-444)||(13191039-13191095)
chr2 (395-478)||(29804715-29804796)
chr2 (389-445)||(38898938-38898994)
[»] chr5 (41 HSPs)
chr5 (291-473)||(30684476-30684664)
chr5 (289-473)||(189106-189296)
chr5 (289-447)||(24182164-24182329)
chr5 (289-365)||(8391240-8391316)
chr5 (289-365)||(17445373-17445449)
chr5 (289-365)||(34371764-34371840)
chr5 (291-365)||(21886066-21886140)
chr5 (289-361)||(22557125-22557197)
chr5 (288-513)||(30719722-30719949)
chr5 (289-480)||(1821937-1822134)
chr5 (289-480)||(42788564-42788761)
chr5 (371-480)||(27646843-27646950)
chr5 (388-513)||(10926971-10927090)
chr5 (289-365)||(2474557-2474633)
chr5 (289-365)||(3886975-3887051)
chr5 (289-361)||(22556692-22556764)
chr5 (289-365)||(34372220-34372296)
chr5 (291-366)||(2058578-2058653)
chr5 (331-478)||(2193849-2194002)
chr5 (289-480)||(8641953-8642149)
chr5 (386-480)||(10927426-10927518)
chr5 (291-479)||(15512932-15513127)
chr5 (289-444)||(16370629-16370789)
chr5 (386-480)||(39146970-39147062)
chr5 (289-365)||(30720178-30720254)
chr5 (331-365)||(2474111-2474145)
chr5 (289-367)||(18304581-18304659)
chr5 (371-480)||(34867821-34867928)
chr5 (289-362)||(3886519-3886592)
chr5 (396-480)||(17445488-17445570)
chr5 (386-534)||(20039498-20039638)
chr5 (289-365)||(20858460-20858535)
chr5 (289-365)||(30684929-30685005)
chr5 (388-480)||(4658018-4658107)
chr5 (333-436)||(5549418-5549525)
chr5 (329-363)||(18750154-18750188)
chr5 (395-480)||(22556567-22556650)
chr5 (387-475)||(21886170-21886256)
chr5 (329-365)||(4102948-4102984)
chr5 (395-447)||(11160713-11160765)
chr5 (395-443)||(18750228-18750276)
[»] scaffold0020 (1 HSPs)
scaffold0020 (286-475)||(107378-107573)
[»] chr7 (33 HSPs)
chr7 (289-365)||(7646567-7646643)
chr7 (289-480)||(2193287-2193484)
chr7 (289-532)||(2941675-2941920)
chr7 (289-475)||(2189180-2189372)
chr7 (289-478)||(34405509-34405704)
chr7 (289-534)||(42515526-42515772)
chr7 (291-475)||(13125056-13125246)
chr7 (289-480)||(28495885-28496082)
chr7 (289-478)||(36422285-36422479)
chr7 (289-365)||(7646396-7646472)
chr7 (286-365)||(9125111-9125190)
chr7 (289-474)||(5406505-5406697)
chr7 (291-365)||(13122425-13122499)
chr7 (289-362)||(18833441-18833514)
chr7 (386-534)||(679799-679939)
chr7 (289-365)||(37671679-37671755)
chr7 (331-365)||(2465885-2465919)
chr7 (331-365)||(28495568-28495602)
chr7 (289-478)||(2465957-2466152)
chr7 (386-447)||(2611675-2611736)
chr7 (395-479)||(6719106-6719188)
chr7 (386-531)||(6747621-6747759)
chr7 (387-532)||(42515075-42515214)
chr7 (388-436)||(7461375-7461423)
chr7 (399-478)||(26421341-26421418)
chr7 (395-478)||(46425774-46425855)
chr7 (395-480)||(29357488-29357571)
chr7 (395-460)||(35527153-35527216)
chr7 (331-365)||(43776250-43776284)
chr7 (395-447)||(22529267-22529319)
chr7 (287-343)||(26419151-26419207)
chr7 (416-479)||(26957610-26957671)
chr7 (289-365)||(29038938-29039014)
[»] scaffold0168 (1 HSPs)
scaffold0168 (289-480)||(2773-2970)
[»] scaffold0137 (1 HSPs)
scaffold0137 (292-367)||(7092-7167)
[»] scaffold0040 (1 HSPs)
scaffold0040 (289-480)||(2128-2325)
[»] scaffold0499 (1 HSPs)
scaffold0499 (291-480)||(1971-2166)
[»] scaffold1519 (1 HSPs)
scaffold1519 (289-365)||(1619-1695)
[»] scaffold0217 (1 HSPs)
scaffold0217 (289-365)||(462-538)
[»] scaffold0277 (1 HSPs)
scaffold0277 (286-365)||(14617-14696)
[»] chr8 (34 HSPs)
chr8 (289-479)||(25147568-25147764)
chr8 (289-365)||(22548467-22548543)
chr8 (386-479)||(2044090-2044181)
chr8 (289-475)||(10844533-10844725)
chr8 (289-444)||(33852176-33852339)
chr8 (289-365)||(17103233-17103310)
chr8 (291-480)||(22026410-22026605)
chr8 (289-478)||(27022257-27022451)
chr8 (289-447)||(34308397-34308563)
chr8 (289-365)||(10729604-10729680)
chr8 (289-365)||(22548913-22548989)
chr8 (289-544)||(25147937-25148194)
chr8 (289-365)||(34308853-34308929)
chr8 (289-480)||(8080260-8080457)
chr8 (386-480)||(28453369-28453461)
chr8 (371-480)||(3744669-3744776)
chr8 (387-480)||(6464934-6465025)
chr8 (286-480)||(27925930-27926129)
chr8 (297-478)||(12827180-12827367)
chr8 (290-365)||(31283571-31283645)
chr8 (289-480)||(41659023-41659220)
chr8 (332-365)||(25144924-25144957)
chr8 (395-459)||(30334940-30335002)
chr8 (289-365)||(12100843-12100918)
chr8 (289-365)||(32292093-32292169)
chr8 (286-365)||(3745253-3745332)
chr8 (329-363)||(6466860-6466894)
chr8 (395-480)||(10844914-10844997)
chr8 (386-475)||(41913006-41913093)
chr8 (292-365)||(15818937-15819010)
chr8 (387-475)||(22549019-22549105)
chr8 (289-365)||(21316028-21316103)
chr8 (395-478)||(22840561-22840642)
chr8 (289-365)||(32292549-32292625)
[»] scaffold0022 (4 HSPs)
scaffold0022 (289-532)||(162596-162841)
scaffold0022 (289-365)||(163052-163128)
scaffold0022 (289-365)||(163223-163299)
scaffold0022 (292-364)||(69736-69808)
[»] scaffold0047 (2 HSPs)
scaffold0047 (289-511)||(17516-17740)
scaffold0047 (402-534)||(18173-18298)
[»] scaffold0071 (1 HSPs)
scaffold0071 (292-365)||(44642-44715)
[»] scaffold0389 (1 HSPs)
scaffold0389 (289-365)||(13451-13527)
[»] scaffold0024 (1 HSPs)
scaffold0024 (289-365)||(105872-105948)
[»] scaffold0018 (1 HSPs)
scaffold0018 (289-365)||(10452-10527)
[»] scaffold0002 (2 HSPs)
scaffold0002 (289-365)||(154909-154985)
scaffold0002 (395-478)||(154790-154871)
[»] scaffold0557 (1 HSPs)
scaffold0557 (386-447)||(2167-2228)
[»] scaffold0333 (1 HSPs)
scaffold0333 (289-365)||(4713-4788)
[»] scaffold0088 (1 HSPs)
scaffold0088 (397-480)||(23704-23785)
[»] scaffold0007 (1 HSPs)
scaffold0007 (395-522)||(142306-142426)


Alignment Details
Target: chr4 (Bit Score: 462; Significance: 0; HSPs: 48)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 462; E-Value: 0
Query Start/End: Original strand, 19 - 557
Target Start/End: Original strand, 26199935 - 26200469
Alignment:
Q  19 gttctggtttcgacgctggttcaaatttgcttcaagtgacaatgacgatgatgaagcaatagtgccatcaacttggtagagttgtgggttacctatgacg 118  Q
    |||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||| ||| |||||||||||||||||||||||||| ||||||||    
T  26199935 gttctgatttcgacgctggttcaaatttgcttcaagtgacagtgacgatgatgaagcaatggtgtcatcaacttggtagagttgtgggttaactatgacg 26200034  T
Q  119 gtgctagccacttgccacccacatctttggtttgcctttggatcttagaactaaaaggtggtgaaatcgtagtgtacgattcctataggcgacaccgttg 218  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26200035 gtgctagccacttgccacccacatcttaggtttgcctttggatcttagaactaaaaggtggtgaaatcgtagtgtacgattcctataggcgacaccgttg 26200134  T
Q  219 atccttttagacctaagatcttcatcctgatggtgtattagaaggtagaggaagatgaacattgtatgcatgttttgtcctcactcacacgcttttcgtg 318  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  26200135 atccttttagacctaagattttcatcctgatggtgtattagaaggtagaggaagatgaacgttgtatgcatgttttgtcctcactcacacgcttttcgtg 26200234  T
Q  319 aaactttcctgaaggtcacccatcccaaaattgctccaagtcaagcatgttaagttcttatgatttcggctaccacaaagaatatgcatcttgtttgtat 418  Q
    ||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  26200235 aaacttcgctgaaggtcacccatcccaaaattgctccaagtcaagcatgttaagttcttatggtttcggctaccacaaagaatatgcatcttgtttgtat 26200334  T
Q  419 agttagtatcaaacaattgttataagcctcttctttcaaccatgatgtcccatacctacacgtacaatatcaggatccctctcattcttatgtgaattca 518  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    ||||||||||||||||||||||||| |||||||||||    
T  26200335 agttagtatcaaacaattgttataagcctcttccttcaaccatgatgtcccatacctac----acaatatcaggatccctctcattctgatgtgaattca 26200430  T
Q  519 gtttgcctagaagctgccagaagccactctttatcatgc 557  Q
    ||||||||||||||||  |||||||||||||||||||||    
T  26200431 gtttgcctagaagctgttagaagccactctttatcatgc 26200469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 289 - 478
Target Start/End: Original strand, 14572066 - 14572257
Alignment:
Q  289 tgttttgtcctcactcacacgcttttcgtgaaactttcctgaaggtcacccatcccaaaattgctccaagtcaagca-----tgttaagttcttatgatt 383  Q
    ||||||||||||||||||||||||| || ||||||| || |||||||||||||| ||||||||||| ||||||||||     |||  |||||||||| ||    
T  14572066 tgttttgtcctcactcacacgctttccgagaaacttcccagaaggtcacccatctcaaaattgctctaagtcaagcacgctttgtggagttcttatggtt 14572165  T
Q  384 tcggctaccacaaagaatatgcatcttgtttgtatagttagtatcaaacaattgttataagcctcttctttcaaccatgatgtcccatacctaca 478  Q
    | |||||||  |||||| ||||||||||||  ||||| ||||| ||||||||| |||||||||||  | ||||||||||  ||||||||||||||    
T  14572166 taggctacc-gaaagaagatgcatcttgttgatataggtagtaccaaacaattcttataagcctc--ccttcaaccatgtagtcccatacctaca 14572257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 289 - 480
Target Start/End: Original strand, 12691911 - 12692108
Alignment:
Q  289 tgttttgtcctcactcacacgcttttcgtgaaactttcctgaaggtcacccatcccaaaattgctccaagtcaagca--------tgttaagttcttatg 380  Q
    |||||||||||||||| |||||||  || ||||||| || | |||||||||||||||||||||||||||||||||||        |||  ||||||||||    
T  12691911 tgttttgtcctcactcgcacgcttaccgggaaacttcccagtaggtcacccatcccaaaattgctccaagtcaagcacgcttaactgtggagttcttatg 12692010  T
Q  381 atttcggctaccacaaagaatatgcatcttgtttgtatagttagtatcaaacaattgttataagcctcttctttcaaccatgatgtcccatacctacacg 480  Q
       |  ||||||  |||||| ||||||||||||  ||||| ||||| ||||||||| ||||||||  |||| ||||||||||  ||||||||||| ||||    
T  12692011 gaatgagctaccgaaaagaagatgcatcttgttgatataggtagtaccaaacaattcttataagc--cttccttcaaccatgcagtcccatacctgcacg 12692108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 289 - 479
Target Start/End: Complemental strand, 49998864 - 49998668
Alignment:
Q  289 tgttttgtcctcactcacacgcttttcgtgaaactttcctgaaggtcacccatcccaaaattgctccaagtcaagca--------tgttaagttcttatg 380  Q
    |||||||||||||||| ||| |||  || ||||||| || | |||||||||||||||||||||||||||||||| ||        |||  ||||||||||    
T  49998864 tgttttgtcctcactcgcacacttaccgggaaacttcccggtaggtcacccatcccaaaattgctccaagtcaaacacgcttaactgtggagttcttatg 49998765  T
Q  381 atttcggctaccacaaagaatatgcatcttgtttgtatagttagtatcaaacaattgttataagcctcttctttcaaccatgatgtcccatacctacac 479  Q
       |  ||||||  |||||| ||||||||||||  ||||| ||||| ||||||||| |||||||  ||||| ||||||||||  ||||||| |||||||    
T  49998764 gaatgagctaccgaaaagaagatgcatcttgttgatataggtagtaccaaacaattcttataag--tcttccttcaaccatgcagtcccatgcctacac 49998668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 289 - 447
Target Start/End: Original strand, 4127801 - 4127967
Alignment:
Q  289 tgttttgtcctcactcacacgcttttcgtgaaactttcctgaaggtcacccatcccaaaattgctccaagtcaagca--------tgttaagttcttatg 380  Q
    ||||||||||||||||||||||||  ||  ||||||| | | |||||||||||||||||||||||| ||| ||||||        | | |||||||||||    
T  4127801 tgttttgtcctcactcacacgcttaccggaaaacttttcggtaggtcacccatcccaaaattgctctaagccaagcacgcttaactctgaagttcttatg 4127900  T
Q  381 atttcggctaccacaaagaatatgcatcttgtttgtatagttagtatcaaacaattgttataagcct 447  Q
       | |||||||  |||||| ||||||||||||  ||||| ||||| ||||||||| ||||||||||    
T  4127901 gaattggctaccgaaaagaagatgcatcttgttgatataggtagtaccaaacaattcttataagcct 4127967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 289 - 366
Target Start/End: Complemental strand, 4185943 - 4185866
Alignment:
Q  289 tgttttgtcctcactcacacgcttttcgtgaaactttcctgaaggtcacccatcccaaaattgctccaagtcaagcat 366  Q
    ||||||||||||| |||||||||||||| |||| ||  |  ||||||||| |||||||||||||||||||||||||||    
T  4185943 tgttttgtcctcattcacacgcttttcgagaaatttcgcataaggtcacctatcccaaaattgctccaagtcaagcat 4185866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 289 - 478
Target Start/End: Original strand, 7678534 - 7678729
Alignment:
Q  289 tgttttgtcctcactcacacgcttttcgtgaaactttcctgaaggtcacccatcccaaaattgctccaagtcaagca--------tgttaagttcttatg 380  Q
    |||||||||||||||| ||| |||  || ||||||| || | |||||||||||||||||||||||||||||||||||        |||  ||||||||||    
T  7678534 tgttttgtcctcactcgcacacttaccgggaaacttcccggtaggtcacccatcccaaaattgctccaagtcaagcacacttaactgtggagttcttatg 7678633  T
Q  381 atttcggctaccacaaagaatatgcatcttgtttgtatagttagtatcaaacaattgttataagcctcttctttcaaccatgatgtcccatacctaca 478  Q
       |  ||||||  |||||| ||||||||||||  ||||| ||||| | ||||||| ||||||||  |||| ||||||||||  | ||||||||||||    
T  7678634 gaataagctaccgaaaagaagatgcatcttgttgatataggtagtacccaacaattcttataagc--cttccttcaaccatgtagccccatacctaca 7678729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 289 - 447
Target Start/End: Complemental strand, 17628739 - 17628573
Alignment:
Q  289 tgttttgtcctcactcacacgcttttcgtgaaactttcctgaaggtcacccatcccaaaattgctccaagtcaagca--------tgttaagttcttatg 380  Q
    |||||||||||||||||||||||||  | ||| ||| |  |||||||||||||| |||||||||||||||||| |||        |||  | ||||||||    
T  17628739 tgttttgtcctcactcacacgctttatgggaatcttcctagaaggtcacccatctcaaaattgctccaagtcaggcacgctcaactgtggaattcttatg 17628640  T
Q  381 atttcggctaccacaaagaatatgcatcttgtttgtatagttagtatcaaacaattgttataagcct 447  Q
      || ||||| |  |||||| |||||||||||| |||||| ||||| ||||||||| ||||||||||    
T  17628639 ggttgggctatcgaaaagaagatgcatcttgttggtataggtagtaccaaacaattcttataagcct 17628573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 289 - 365
Target Start/End: Complemental strand, 35871855 - 35871779
Alignment:
Q  289 tgttttgtcctcactcacacgcttttcgtgaaactttcctgaaggtcacccatcccaaaattgctccaagtcaagca 365  Q
    |||||||||||||||| |||| ||  || ||||||||||   |||||||||||||||||||||||||||||||||||    
T  35871855 tgttttgtcctcactcgcacgtttaccgggaaactttccgataggtcacccatcccaaaattgctccaagtcaagca 35871779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 289 - 365
Target Start/End: Original strand, 44470787 - 44470863
Alignment:
Q  289 tgttttgtcctcactcacacgcttttcgtgaaactttcctgaaggtcacccatcccaaaattgctccaagtcaagca 365  Q
    |||||||||||||||| |||||||  || ||||||| || | |||||| ||||||||||||||||||||||||||||    
T  44470787 tgttttgtcctcactcgcacgcttaccgggaaacttcccggtaggtcaaccatcccaaaattgctccaagtcaagca 44470863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 289 - 480
Target Start/End: Complemental strand, 3169434 - 3169237
Alignment:
Q  289 tgttttgtcctcactcacacgcttttcgtgaaactttcctgaaggtcacccatcccaaaattgctccaagtcaagca--------tgttaagttcttatg 380  Q
    |||||||||||||||| |||||||  |  |||||||||  | ||||||| ||||| || | | ||||||||||||||        |||  ||||||||||    
T  3169434 tgttttgtcctcactcgcacgcttaccaagaaactttctggtaggtcactcatccaaagactactccaagtcaagcacgcttaagtgtggagttcttatg 3169335  T
Q  381 atttcggctaccacaaagaatatgcatcttgtttgtatagttagtatcaaacaattgttataagcctcttctttcaaccatgatgtcccatacctacacg 480  Q
      || || ||||| |||||| ||||||||||||  ||||| ||||| ||||||||| |||||||  ||||| ||||||||||  ||||||||||||||||    
T  3169334 gattgggttaccaaaaagaagatgcatcttgttgatataggtagtaccaaacaatttttataag--tcttccttcaaccatgtagtcccatacctacacg 3169237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 371 - 480
Target Start/End: Original strand, 14571723 - 14571830
Alignment:
Q  371 agttcttatgatttcggctaccacaaagaatatgcatcttgtttgtatagttagtatcaaacaattgttataagcctcttctttcaaccatgatgtccca 470  Q
    |||||||||| ||| ||||||   |||||| ||||||||||||  ||||| ||||| ||||||||| |||||||| ||  | ||||||||||| ||||||    
T  14571723 agttcttatggtttaggctactgaaaagaagatgcatcttgttgatataggtagtaccaaacaattcttataagcatc--ccttcaaccatgaagtccca 14571820  T
Q  471 tacctacacg 480  Q
    ||||||||||    
T  14571821 tacctacacg 14571830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 286 - 475
Target Start/End: Original strand, 44471234 - 44471429
Alignment:
Q  286 gcatgttttgtcctcactcacacgcttttcgtgaaactttcctgaaggtcacccatcccaaaattgctccaagtcaagca--------tgttaagttctt 377  Q
    ||||||||||||||||||| | |||||  || |||| || || | ||||||||||||||||||||||||||| |||||||        |||  |||||||    
T  44471234 gcatgttttgtcctcactcgcccgcttaccgggaaatttcccggtaggtcacccatcccaaaattgctccaaatcaagcacgcttaactgtggagttctt 44471333  T
Q  378 atgatttcggctaccacaaagaatatgcatcttgtttgtatagttagtatcaaacaattgttataagcctcttctttcaaccatgatgtcccatacct 475  Q
    |||   |  ||||||  |||||| ||||||||||||  ||||| ||||| ||||||||| |||||||  ||||| ||||||||||  ||| |||||||    
T  44471334 atggaatgagctaccgaaaagaagatgcatcttgttgatataggtagtaccaaacaattcttataag--tcttccttcaaccatgtagtctcatacct 44471429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 289 - 365
Target Start/End: Original strand, 14571600 - 14571676
Alignment:
Q  289 tgttttgtcctcactcacacgcttttcgtgaaactttcctgaaggtcacccatcccaaaattgctccaagtcaagca 365  Q
    |||||||||||||||||||| |||| || ||||||| ||  ||| ||||||||| | ||||||||||||||||||||    
T  14571600 tgttttgtcctcactcacacactttccgagaaacttcccaaaagatcacccatctcgaaattgctccaagtcaagca 14571676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 289 - 365
Target Start/End: Original strand, 23350195 - 23350271
Alignment:
Q  289 tgttttgtcctcactcacacgcttttcgtgaaactttcctgaaggtcacccatcccaaaattgctccaagtcaagca 365  Q
    ||||||||||||||||||||||||   | |||||||  | | |||||| ||||||||||||||||||||||||||||    
T  23350195 tgttttgtcctcactcacacgcttacagagaaacttctcggtaggtcatccatcccaaaattgctccaagtcaagca 23350271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 289 - 447
Target Start/End: Complemental strand, 27026730 - 27026565
Alignment:
Q  289 tgttttgtcctcactcacacgcttttcgtgaaactttcctgaaggtcacccatcccaaaattgctccaagtcaagcatg-tta-------agttcttatg 380  Q
    |||||| |||||| |||||||||||| |  |||||| |  ||||||||||| ||||||||||||| ||||||||||| | |||       ||||||||||    
T  27026730 tgttttttcctcagtcacacgctttttggtaaacttcctagaaggtcacccttcccaaaattgcttcaagtcaagcacgcttaactacgtagttcttatg 27026631  T
Q  381 atttcggctaccacaaagaatatgcatcttgtttgtatagttagtatcaaacaattgttataagcct 447  Q
       | |||||||| ||| || ||||||||||||  ||||| ||||||||||||||| ||||||||||    
T  27026630 gaatgggctacca-aaaaaagatgcatcttgttgatataggtagtatcaaacaattcttataagcct 27026565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 289 - 365
Target Start/End: Original strand, 50814737 - 50814813
Alignment:
Q  289 tgttttgtcctcactcacacgcttttcgtgaaactttcctgaaggtcacccatcccaaaattgctccaagtcaagca 365  Q
    |||||||||||||||| |||| ||  || ||||||| || | |||||| ||||||||||||||||||||||||||||    
T  50814737 tgttttgtcctcactcgcacgtttaccgggaaacttcccggtaggtcatccatcccaaaattgctccaagtcaagca 50814813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 329 - 480
Target Start/End: Complemental strand, 1464335 - 1464178
Alignment:
Q  329 gaaggtcacccatcccaaaattgctccaagtcaagca--------tgttaagttcttatgatttcggctaccacaaagaatatgcatcttgtttgtatag 420  Q
    ||||||||||||||||||||||||||||||| |||||        ||| ||||||||||||  |  ||||||  |||||| ||||||||||||  |||||    
T  1464335 gaaggtcacccatcccaaaattgctccaagttaagcacgctaaattgtgaagttcttatgaaatgagctaccgaaaagaagatgcatcttgttgatatag 1464236  T
Q  421 ttagtatcaaacaattgttataagcctcttctttcaaccatgatgtcccatacctacacg 480  Q
     ||||| ||||||||| |||||||  | |||||||||| |||   || ||||||||||||    
T  1464235 gtagtaccaaacaattcttataag--ttttctttcaactatgtattctcatacctacacg 1464178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 386 - 480
Target Start/End: Original strand, 1645766 - 1645858
Alignment:
Q  386 ggctaccacaaagaatatgcatcttgtttgtatagttagtatcaaacaattgttataagcctcttctttcaaccatgatgtcccatacctacacg 480  Q
    |||||||| |||||| ||||||||||||  ||||| || || ||||||||| |||||||  ||||| ||||||||||  ||||||||||||||||    
T  1645766 ggctaccaaaaagaagatgcatcttgttgatataggtaataccaaacaattcttataag--tcttccttcaaccatgtagtcccatacctacacg 1645858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 286 - 365
Target Start/End: Original strand, 27578818 - 27578897
Alignment:
Q  286 gcatgttttgtcctcactcacacgcttttcgtgaaactttcctgaaggtcacccatcccaaaattgctccaagtcaagca 365  Q
    ||||| ||||||||||||| ||||||||  | ||||||| || ||||||||| ||||||||||| ||||||||| |||||    
T  27578818 gcatgatttgtcctcactcgcacgctttctgggaaacttcccagaaggtcacgcatcccaaaatcgctccaagttaagca 27578897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 289 - 367
Target Start/End: Original strand, 4127330 - 4127408
Alignment:
Q  289 tgttttgtcctcactcacacgcttttcgtgaaactttcctgaaggtcacccatcccaaaattgctccaagtcaagcatg 367  Q
    ||||||||||||||||||||||||  || ||||||| ||   || ||||||||||||||||||||||||| ||| ||||    
T  4127330 tgttttgtcctcactcacacgcttaccgggaaacttcccgatagctcacccatcccaaaattgctccaagccaatcatg 4127408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 289 - 543
Target Start/End: Original strand, 8467725 - 8467966
Alignment:
Q  289 tgttttgtcctcactcacacgcttttcgtgaaactttcctgaaggtcacccatcccaaaattgctccaagtcaagcatgttaagttcttatgatttcggc 388  Q
    |||||||||||||||| || ||||| || ||||||| ||  |||||||||||     |||||||||||||||||||| | | |  | |   | | | |||    
T  8467725 tgttttgtcctcactcgcatgctttccgagaaacttcccataaggtcaccca-----aaattgctccaagtcaagcacgcttaactgtggagttctgggc 8467819  T
Q  389 taccacaaagaatatgcatcttgtttgtatagttagtatcaaacaattgttataagcctcttctttcaaccatgatgtcccatacctacacgtacaatat 488  Q
    ||||  |||||| |||||||||||| |||||| ||||| ||||||||| |||||||  ||||| ||||||||||  ||| |||||||    | ||| | |    
T  8467820 taccgaaaagaagatgcatcttgttggtataggtagtaccaaacaattcttataag--tcttccttcaaccatgtagtctcatacct----gcacagtct 8467913  T
Q  489 caggatccctctcattcttatgtgaattcagtttgcctagaagctgccagaagcc 543  Q
    |||||||||| ||||||| |||||  ||| | |||||||||||||||||| ||||    
T  8467914 caggatccctttcattctgatgtg-gttc-ggttgcctagaagctgccaggagcc 8467966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 287 - 473
Target Start/End: Original strand, 31817762 - 31817954
Alignment:
Q  287 catgttttgtcctcactcacacgcttttcgtgaaactttcctgaaggtcacccatcccaaaattgctccaagtcaagcatgtt--------aagttctta 378  Q
    |||| ||||||||||||| |||||||| || |||||||  | ||||||| ||||||| |||| | || ||||||||||| | |        |||||||||    
T  31817762 catgatttgtcctcactcgcacgctttccgcgaaacttcaccgaaggtcgcccatcctaaaactactacaagtcaagcacgcttaactatgaagttctta 31817861  T
Q  379 tgatttcggctaccacaaagaatatgcatcttgtttgtatagttagtatcaaacaattgttataagcctcttctttcaaccatgatgtcccatac 473  Q
    |||  | | |||||  |||||| |||||||||||| |||||| ||||| | ||||||| ||||||||  |||| ||||||||||  |||||||||    
T  31817862 tgaaatggactaccgaaaagaagatgcatcttgttggtataggtagtaccgaacaattcttataagc--cttccttcaaccatgcagtcccatac 31817954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 386 - 473
Target Start/End: Original strand, 9423875 - 9423960
Alignment:
Q  386 ggctaccacaaagaatatgcatcttgtttgtatagttagtatcaaacaattgttataagcctcttctttcaaccatgatgtcccatac 473  Q
    |||||| | |||||| ||||||||||||  ||||| ||||| ||||||||| ||||||||  |||||||||||||||  |||||||||    
T  9423875 ggctactagaaagaagatgcatcttgttgatataggtagtaccaaacaattattataagc--cttctttcaaccatgcagtcccatac 9423960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 289 - 365
Target Start/End: Original strand, 11828397 - 11828473
Alignment:
Q  289 tgttttgtcctcactcacacgcttttcgtgaaactttcctgaaggtcacccatcccaaaattgctccaagtcaagca 365  Q
    ||||||| |||||||| |||  |||| | |||| ||||| |||||||||||||||||||| |||||||||| |||||    
T  11828397 tgttttgccctcactcgcacattttttgggaaattttccagaaggtcacccatcccaaaaatgctccaagtaaagca 11828473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 289 - 365
Target Start/End: Original strand, 27578198 - 27578274
Alignment:
Q  289 tgttttgtcctcactcacacgcttttcgtgaaactttcctgaaggtcacccatcccaaaattgctccaagtcaagca 365  Q
    |||||||||||||||| |||| |||  | ||||||| ||  |||||||| |||||||||| ||||||||||||||||    
T  27578198 tgttttgtcctcactcgcacgttttcagggaaacttcccataaggtcactcatcccaaaactgctccaagtcaagca 27578274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 289 - 365
Target Start/End: Original strand, 27578369 - 27578445
Alignment:
Q  289 tgttttgtcctcactcacacgcttttcgtgaaactttcctgaaggtcacccatcccaaaattgctccaagtcaagca 365  Q
    |||||||||||||||| ||||||| |||  |||||| || ||||||| | ||||||||||||| || ||||||||||    
T  27578369 tgttttgtcctcactcgcacgcttgtcggaaaacttcccagaaggtcgctcatcccaaaattgttcgaagtcaagca 27578445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 287 - 365
Target Start/End: Complemental strand, 13266316 - 13266238
Alignment:
Q  287 catgttttgtcctcactcacacgcttttcgtgaaactttcctgaaggtcacccatcccaaaattgctccaagtcaagca 365  Q
    |||||||| ||||||||| ||| |||||||  |||||| ||  |||||||||||||| |||||| ||| ||||||||||    
T  13266316 catgttttctcctcactcgcacacttttcggaaaacttcccaaaaggtcacccatcctaaaatttctcaaagtcaagca 13266238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 331 - 365
Target Start/End: Original strand, 24628931 - 24628965
Alignment:
Q  331 aggtcacccatcccaaaattgctccaagtcaagca 365  Q
    |||||||||||||||||||||||||||||||||||    
T  24628931 aggtcacccatcccaaaattgctccaagtcaagca 24628965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 395 - 480
Target Start/End: Original strand, 24629003 - 24629089
Alignment:
Q  395 aaagaatatgcatcttgtttgtatagttagtatcaaacaattgttataagcct-cttctttcaaccatgatgtcccatacctacacg 480  Q
    |||||| ||||||||||||  ||||| ||||| ||||||||| ||||||||||  ||| || |||||||  ||||||||||||||||    
T  24629003 aaagaagatgcatcttgttgatataggtagtaccaaacaattcttataagcctaattcctttaaccatgcagtcccatacctacacg 24629089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 331 - 365
Target Start/End: Original strand, 24629387 - 24629421
Alignment:
Q  331 aggtcacccatcccaaaattgctccaagtcaagca 365  Q
    |||||||||||||||||||||||||||||||||||    
T  24629387 aggtcacccatcccaaaattgctccaagtcaagca 24629421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 395 - 480
Target Start/End: Original strand, 50398564 - 50398647
Alignment:
Q  395 aaagaatatgcatcttgtttgtatagttagtatcaaacaattgttataagcctcttctttcaaccatgatgtcccatacctacacg 480  Q
    |||||| ||||||||||||  ||||| ||||| ||||||||| ||||||||  |||| ||||||||||  |||| |||||||||||    
T  50398564 aaagaagatgcatcttgttgatataggtagtaccaaacaattcttataagc--cttccttcaaccatgtagtcctatacctacacg 50398647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 371 - 480
Target Start/End: Original strand, 51331283 - 51331390
Alignment:
Q  371 agttcttatgatttcggctaccacaaagaatatgcatcttgtttgtatagttagtatcaaacaattgttataagcctcttctttcaaccatgatgtccca 470  Q
    |||||||||||  |  ||||||  |||||| ||| ||||||||  ||||| ||||| ||||||||| ||||||||  |||| ||||||||||  ||||||    
T  51331283 agttcttatgaaatgagctaccgaaaagaagatgtatcttgttgatatagatagtaccaaacaattcttataagc--cttccttcaaccatgtagtccca 51331380  T
Q  471 tacctacacg 480  Q
    ||||||||||    
T  51331381 tacctacacg 51331390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 488 - 557
Target Start/End: Complemental strand, 17028901 - 17028833
Alignment:
Q  488 tcaggatccctctcattcttatgtgaattcagtttgcctagaagctgccagaagccactctttatcatgc 557  Q
    ||||||||||||||||||  |||||| ||||||||||||||||||||| || |||| ||| || ||||||    
T  17028901 tcaggatccctctcattccgatgtga-ttcagtttgcctagaagctgcaaggagcctctcattgtcatgc 17028833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 395 - 478
Target Start/End: Original strand, 4127463 - 4127544
Alignment:
Q  395 aaagaatatgcatcttgtttgtatagttagtatcaaacaattgttataagcctcttctttcaaccatgatgtcccatacctaca 478  Q
    |||||| ||||||||||||  ||||| ||||| ||||||||| |||||||  ||||| |||||| |||  ||||||||||||||    
T  4127463 aaagaagatgcatcttgttgatataggtagtaccaaacaattcttataag--tcttccttcaactatgtagtcccatacctaca 4127544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 395 - 478
Target Start/End: Original strand, 23976245 - 23976326
Alignment:
Q  395 aaagaatatgcatcttgtttgtatagttagtatcaaacaattgttataagcctcttctttcaaccatgatgtcccatacctaca 478  Q
    |||||| |||||||||||| |||||| ||||| ||||||||| ||||||  |||||| ||||| ||||  | ||||||||||||    
T  23976245 aaagaagatgcatcttgttagtataggtagtaccaaacaattcttataa--ctcttccttcaatcatgcagacccatacctaca 23976326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 289 - 442
Target Start/End: Original strand, 24271463 - 24271623
Alignment:
Q  289 tgttttgtcctcactcacacgcttttcgtgaaactttcctgaaggtcacccatcccaaaattgctccaagtcaagcatgtt--------aagttcttatg 380  Q
    |||||| || |||||||||||||||     ||||||| | ||||||||| ||||||||||||| || || |||||||||||         ||||||||||    
T  24271463 tgttttttcttcactcacacgctttctacaaaacttttcagaaggtcacgcatcccaaaattgttctaactcaagcatgtttatttgcagagttcttatg 24271562  T
Q  381 atttcggctaccacaaagaatatgcatcttgtttgtatagttagtatcaaacaattgttata 442  Q
       | ||||||| |||| ||||||||||||||| |||||| |||||||||| |||| |||||    
T  24271563 gaatgggctacc-caaaaaatatgcatcttgttcgtataggtagtatcaaataattcttata 24271623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 289 - 480
Target Start/End: Original strand, 23942701 - 23942898
Alignment:
Q  289 tgttttgtcctcactcacacgcttttcgtgaaactttcctgaaggtcacccatcccaaaattgctccaagtcaagca--------tgttaagttcttatg 380  Q
    |||||||||||||||| ||||||| |   |||||||||| | |||||| |||||| || | | ||||||||||||||        |||  ||||||||||    
T  23942701 tgttttgtcctcactcgcacgcttatttggaaactttccggtaggtcatccatccaaagactactccaagtcaagcacgcttaactgtggagttcttatg 23942800  T
Q  381 atttcggctaccacaaagaatatgcatcttgtttgtatagttagtatcaaacaattgttataagcctcttctttcaaccatgatgtcccatacctacacg 480  Q
       |  ||||| | |||||| ||||||||||||  ||||| ||||| ||||||||| ||||||||   ||| ||||||||||  || |||||||||||||    
T  23942801 gaatgtgctacaaaaaagaagatgcatcttgttgatataggtagtaccaaacaattcttataagc--tttccttcaaccatgtagttccatacctacacg 23942898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 291 - 362
Target Start/End: Complemental strand, 40607157 - 40607086
Alignment:
Q  291 ttttgtcctcactcacacgcttttcgtgaaactttcctgaaggtcacccatcccaaaattgctccaagtcaa 362  Q
    ||||||||||||||  ||||||  ||  ||||||||| | ||||||||||||||||| ||||||||| ||||    
T  40607157 ttttgtcctcactcgaacgcttaccgataaactttccggtaggtcacccatcccaaatttgctccaaatcaa 40607086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 287 - 365
Target Start/End: Complemental strand, 17029104 - 17029026
Alignment:
Q  287 catgttttgtcctcactcacacgcttttcgtgaaactttcctgaaggtcacccatcccaaaattgctccaagtcaagca 365  Q
    |||||||| |||||| |  ||| ||||||| ||||||| ||  ||| | ||||||||| ||||||||||||||||||||    
T  17029104 catgttttctcctcattagcacacttttcgagaaacttcccataagtttacccatcccgaaattgctccaagtcaagca 17029026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 395 - 480
Target Start/End: Original strand, 24629459 - 24629542
Alignment:
Q  395 aaagaatatgcatcttgtttgtatagttagtatcaaacaattgttataagcctcttctttcaaccatgatgtcccatacctacacg 480  Q
    |||||| ||||||||||||  ||||| ||||| ||||||||| ||||||||   ||| || |||||||  ||||||||||||||||    
T  24629459 aaagaagatgcatcttgttgatataggtagtaccaaacaattcttataagc--attcctttaaccatgcagtcccatacctacacg 24629542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 405 - 547
Target Start/End: Original strand, 29628703 - 29628838
Alignment:
Q  405 catcttgtttgtatagttagtatcaaacaattgttataagcctcttctttcaaccatgatgtcccatacctacacgtacaatatcaggatccctctcatt 504  Q
    |||||||||  ||||| ||||| ||||||||| |||||||  ||||| ||||||||||  ||| ||||||||||||  |    |||||||||||||||||    
T  29628703 catcttgttgatataggtagtaccaaacaattcttataag--tcttccttcaaccatgtagtctcatacctacacggcc----tcaggatccctctcatt 29628796  T
Q  505 cttatgtgaattcagtttgcctagaagctgccagaagccactc 547  Q
       ||||| |||| |||   |||||||||| ||||||||||||    
T  29628797 tcgatgtg-attcggttcctctagaagctgtcagaagccactc 29628838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 334 - 367
Target Start/End: Original strand, 23091468 - 23091501
Alignment:
Q  334 tcacccatcccaaaattgctccaagtcaagcatg 367  Q
    |||||||||||||||||||| |||||||||||||    
T  23091468 tcacccatcccaaaattgctacaagtcaagcatg 23091501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 492 - 537
Target Start/End: Original strand, 33987188 - 33987232
Alignment:
Q  492 gatccctctcattcttatgtgaattcagtttgcctagaagctgcca 537  Q
    ||||||||||||||  |||||| |||||||||||||||||||||||    
T  33987188 gatccctctcattccgatgtga-ttcagtttgcctagaagctgcca 33987232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 397 - 461
Target Start/End: Original strand, 44470902 - 44470964
Alignment:
Q  397 agaatatgcatcttgtttgtatagttagtatcaaacaattgttataagcctcttctttcaaccat 461  Q
    |||| ||||||||||||  ||||| ||||| ||||||||| ||||||||  ||||||||||||||    
T  44470902 agaagatgcatcttgttgatataggtagtaccaaacaattcttataagc--cttctttcaaccat 44470964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 289 - 365
Target Start/End: Complemental strand, 21067510 - 21067434
Alignment:
Q  289 tgttttgtcctcactcacacgcttttcgtgaaactttcctgaaggtcacccatcccaaaattgctccaagtcaagca 365  Q
    |||||||||| ||||| |||||||  || |||||||||| | ||||||||| ||| || | | ||||||||||||||    
T  21067510 tgttttgtccccactcgcacgcttaccgagaaactttccggtaggtcacccctccaaagactactccaagtcaagca 21067434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 389 - 445
Target Start/End: Original strand, 21220351 - 21220407
Alignment:
Q  389 taccacaaagaatatgcatcttgtttgtatagttagtatcaaacaattgttataagc 445  Q
    ||||| |||||| ||||||||||||  ||||| ||||| ||||||||| ||||||||    
T  21220351 taccaaaaagaagatgcatcttgttgatataggtagtaccaaacaattcttataagc 21220407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 289 - 365
Target Start/End: Original strand, 23943154 - 23943230
Alignment:
Q  289 tgttttgtcctcactcacacgcttttcgtgaaactttcctgaaggtcacccatcccaaaattgctccaagtcaagca 365  Q
    |||||||||||||||| |||||||  || ||||||| || |  |||||||||||| || | | ||||||||||||||    
T  23943154 tgttttgtcctcactcgcacgcttaccgggaaacttcccggttggtcacccatccaaagactactccaagtcaagca 23943230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 76; Significance: 7e-35; HSPs: 3)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 289 - 478
Target Start/End: Complemental strand, 245310 - 245119
Alignment:
Q  289 tgttttgtcctcactcacacgcttttcgtgaaactttcctgaaggtcacccatcccaaaattgctccaagtcaagca-----tgttaagttcttatgatt 383  Q
    ||||||||||||||||||||||||| || ||||||| || |||||||||||||| ||||||||||| ||||||||||     |||  |||||||||| ||    
T  245310 tgttttgtcctcactcacacgctttccgagaaacttcccagaaggtcacccatctcaaaattgctctaagtcaagcacgctttgtggagttcttatggtt 245211  T
Q  384 tcggctaccacaaagaatatgcatcttgtttgtatagttagtatcaaacaattgttataagcctcttctttcaaccatgatgtcccatacctaca 478  Q
    | |||||||  |||||| ||||||||||||  ||||| ||||| ||||||||| |||||||||||  | ||||||||||  ||||||||||||||    
T  245210 taggctacc-gaaagaagatgcatcttgttgatataggtagtaccaaacaattcttataagcctc--ccttcaaccatgtagtcccatacctaca 245119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005; HSP #2
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 371 - 480
Target Start/End: Complemental strand, 245653 - 245546
Alignment:
Q  371 agttcttatgatttcggctaccacaaagaatatgcatcttgtttgtatagttagtatcaaacaattgttataagcctcttctttcaaccatgatgtccca 470  Q
    |||||||||| ||| ||||||   |||||| ||||||||||||  ||||| ||||| ||||||||| |||||||| ||  | ||||||||||| ||||||    
T  245653 agttcttatggtttaggctactgaaaagaagatgcatcttgttgatataggtagtaccaaacaattcttataagcatc--ccttcaaccatgaagtccca 245556  T
Q  471 tacctacacg 480  Q
    ||||||||||    
T  245555 tacctacacg 245546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005; HSP #3
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 289 - 365
Target Start/End: Complemental strand, 245776 - 245700
Alignment:
Q  289 tgttttgtcctcactcacacgcttttcgtgaaactttcctgaaggtcacccatcccaaaattgctccaagtcaagca 365  Q
    |||||||||||||||||||| |||| || ||||||| ||  ||| ||||||||| | ||||||||||||||||||||    
T  245776 tgttttgtcctcactcacacactttccgagaaacttcccaaaagatcacccatctcgaaattgctccaagtcaagca 245700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 73; Significance: 4e-33; HSPs: 29)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 296 - 480
Target Start/End: Original strand, 23986242 - 23986432
Alignment:
Q  296 tcctcactcacacgcttttcgtgaaactttcctgaaggtcacccatcccaaaattgctccaagtcaagca--------tgttaagttcttatgatttcgg 387  Q
    ||||||||| |||||||| |||||||||| || |||||||||||||||||||||||||||||||||||||        ||| ||||||||||| |||  |    
T  23986242 tcctcactcgcacgctttccgtgaaacttcccagaaggtcacccatcccaaaattgctccaagtcaagcacacttaactgtgaagttcttatggtttgag 23986341  T
Q  388 ctaccacaaagaatatgcatcttgtttgtatagttagtatcaaacaattgttataagcctcttctttcaaccatgatgtcccatacctacacg 480  Q
    |||||  |||||| ||||||||||||  ||||| ||||| ||||||||| ||||||||  || | ||||||||||  ||||||||||||||||    
T  23986342 ctaccgaaaagaagatgcatcttgttcatataggtagtaccaaacaattcttataagc--ctaccttcaaccatgtagtcccatacctacacg 23986432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 289 - 480
Target Start/End: Original strand, 17027449 - 17027646
Alignment:
Q  289 tgttttgtcctcactcacacgcttttcgtgaaactttcctgaaggtcacccatcccaaaattgctccaagtcaagca--------tgttaagttcttatg 380  Q
    ||||||||||||||||||||||||  || ||||||| || | |||||||||||||||||||||||||||||||||||        |||  ||||||||||    
T  17027449 tgttttgtcctcactcacacgcttaccgggaaacttcccggtaggtcacccatcccaaaattgctccaagtcaagcacgcttaactgtggagttcttatg 17027548  T
Q  381 atttcggctaccacaaagaatatgcatcttgtttgtatagttagtatcaaacaattgttataagcctcttctttcaaccatgatgtcccatacctacacg 480  Q
    |  |  ||||||  |||||| ||| ||||||||  ||||| ||||| ||||||||| ||||||||  |||| ||||||||||  ||||||||||| ||||    
T  17027549 aaatgagctaccgaaaagaagatgaatcttgttgatataggtagtaccaaacaattcttataagc--cttccttcaaccatgcagtcccatacctgcacg 17027646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 291 - 478
Target Start/End: Original strand, 13191433 - 13191626
Alignment:
Q  291 ttttgtcctcactcacacgcttttcgtgaaactttcctgaaggtcacccatcccaaaattgctccaagtcaagca--------tgttaagttcttatgat 382  Q
    |||||||||||||| ||||||| ||| ||||||| || |  ||||||||||| ||||||||||||||||||||||        ||| |||||||||||      
T  13191433 ttttgtcctcactcgcacgcttatcgggaaacttcccggttggtcacccatctcaaaattgctccaagtcaagcacgcttaactgtgaagttcttatgga 13191532  T
Q  383 ttcggctaccacaaagaatatgcatcttgtttgtatagttagtatcaaacaattgttataagcctcttctttcaaccatgatgtcccatacctaca 478  Q
        ||||||  |||||| ||||||||||||  ||||| ||||| ||||||||| ||||||||  |||| ||||||||||  ||||||||||||||    
T  13191533 acgagctaccgaaaagaagatgcatcttgttgatataggtagtaccaaacaattcttataagc--cttccttcaaccatgcagtcccatacctaca 13191626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 289 - 480
Target Start/End: Complemental strand, 20850549 - 20850352
Alignment:
Q  289 tgttttgtcctcactcacacgcttttcgtgaaactttcctgaaggtcacccatcccaaaattgctccaagtcaagca--------tgttaagttcttatg 380  Q
    |||||||||||||||| |||||||  || ||||||| || | |||||||||||||||||||||||||||||||||||        |||  ||||||||||    
T  20850549 tgttttgtcctcactcgcacgcttaccgggaaacttcccggtaggtcacccatcccaaaattgctccaagtcaagcacgcttaactgtagagttcttatg 20850450  T
Q  381 atttcggctaccacaaagaatatgcatcttgtttgtatagttagtatcaaacaattgttataagcctcttctttcaaccatgatgtcccatacctacacg 480  Q
       |  ||||||  |||||| ||||||||||||  ||||| |||||  |||||||| ||||||||  |||| ||||||||||  ||||||||||| ||||    
T  20850449 gaatgagctaccgaaaagaagatgcatcttgttgatataggtagtacaaaacaattcttataagc--cttccttcaaccatgcagtcccatacctgcacg 20850352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 286 - 365
Target Start/End: Complemental strand, 9352293 - 9352214
Alignment:
Q  286 gcatgttttgtcctcactcacacgcttttcgtgaaactttcctgaaggtcacccatcccaaaattgctccaagtcaagca 365  Q
    ||||||||||||||||||| |||||||  || ||||||| |  | |||||||||||||||||||||||||||||||||||    
T  9352293 gcatgttttgtcctcactcgcacgcttaccgagaaacttccaggtaggtcacccatcccaaaattgctccaagtcaagca 9352214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 291 - 475
Target Start/End: Complemental strand, 13493015 - 13492825
Alignment:
Q  291 ttttgtcctcactcacacgcttttcgtgaaactttcctgaaggtcacccatcccaaaattgctccaagtcaagca--------tgttaagttcttatgat 382  Q
    |||||||||||||| |||||||  || | |||||||| | |||||||||||||||||||||||| ||||||||||        |||  ||||||||||      
T  13493015 ttttgtcctcactcgcacgcttaccgggtaactttccggtaggtcacccatcccaaaattgctctaagtcaagcacgcttaactgtggagttcttatgga 13492916  T
Q  383 ttcggctaccacaaagaatatgcatcttgtttgtatagttagtatcaaacaattgttataagcctcttctttcaaccatgatgtcccatacct 475  Q
     |  ||||||  |||||| ||||||||||||  ||||| ||||| ||||||||| ||||||||  |||| ||||||||||  ||| |||||||    
T  13492915 atgagctaccgaaaagaagatgcatcttgttgatataggtagtaccaaacaattattataagc--cttccttcaaccatgcagtctcatacct 13492825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 388 - 479
Target Start/End: Complemental strand, 3652607 - 3652518
Alignment:
Q  388 ctaccacaaagaatatgcatcttgtttgtatagttagtatcaaacaattgttataagcctcttctttcaaccatgatgtcccatacctacac 479  Q
    |||||| |||||| ||||||||||||  ||||| |||||||| |||||| ||||||||  |||| ||||||||||  |||||||||||||||    
T  3652607 ctaccaaaaagaagatgcatcttgttgatataggtagtatcagacaattcttataagc--cttccttcaaccatgtagtcccatacctacac 3652518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 289 - 365
Target Start/End: Complemental strand, 7912106 - 7912030
Alignment:
Q  289 tgttttgtcctcactcacacgcttttcgtgaaactttcctgaaggtcacccatcccaaaattgctccaagtcaagca 365  Q
    |||||||||||||||| || ||||  || ||| ||| || | |||||||||||||||||||||||||||||||||||    
T  7912106 tgttttgtcctcactcgcatgcttaccgagaatcttcccggtaggtcacccatcccaaaattgctccaagtcaagca 7912030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 289 - 365
Target Start/End: Complemental strand, 7912538 - 7912462
Alignment:
Q  289 tgttttgtcctcactcacacgcttttcgtgaaactttcctgaaggtcacccatcccaaaattgctccaagtcaagca 365  Q
    ||||||||||||||||  ||||||  || ||||||| || | ||||||||||| |||||||||||||||||||||||    
T  7912538 tgttttgtcctcactcgtacgcttaacgggaaacttcccagcaggtcacccattccaaaattgctccaagtcaagca 7912462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 291 - 447
Target Start/End: Complemental strand, 13492558 - 13492394
Alignment:
Q  291 ttttgtcctcactcacacgcttttcgtgaaactttcctgaaggtcacccatcccaaaattgctccaagtcaagca--------tgttaagttcttatgat 382  Q
    |||| ||||||||| |||||||   | ||||||| || | |||||||||||||||||||||||||||||||||||        |||  ||||||||||      
T  13492558 ttttttcctcactcgcacgcttactgggaaacttcccggtaggtcacccatcccaaaattgctccaagtcaagcacgcttaactgtggagttcttatgga 13492459  T
Q  383 ttcggctaccacaaagaatatgcatcttgtttgtatagttagtatcaaacaattgttataagcct 447  Q
     |  ||||||  |||||| ||||||||||||  ||||| || |||||||||||| ||||||||||    
T  13492458 attagctaccgaaaagaagatgcatcttgttgatataggtaatatcaaacaattcttataagcct 13492394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 318 - 478
Target Start/End: Complemental strand, 23776639 - 23776474
Alignment:
Q  318 gaaactttcctgaaggtcacccatcccaaaattgctccaagtcaagca-------tgttaagttcttatgatttcggctaccacaaagaatatgcatctt 410  Q
    ||||||| || | |||||| |||||||||||||||||||||||||| |       ||| ||||||||||||  |  ||||||  |||||| |||||||||    
T  23776639 gaaacttcccagtaggtcatccatcccaaaattgctccaagtcaagtacgcttaatgtgaagttcttatgaaatgagctaccgaaaagaagatgcatctt 23776540  T
Q  411 gtttgtatagttagtatcaaacaattgttataagcctcttctttcaaccatgatgtcccatacctaca 478  Q
    |||  ||||| ||||| || || ||| |||||||  ||||| ||||||||||  ||||||||||||||    
T  23776539 gttgatataggtagtaccagacgattcttataag--tcttccttcaaccatgtagtcccatacctaca 23776474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 387 - 479
Target Start/End: Original strand, 20126206 - 20126296
Alignment:
Q  387 gctaccacaaagaatatgcatcttgtttgtatagttagtatcaaacaattgttataagcctcttctttcaaccatgatgtcccatacctacac 479  Q
    ||||||| |||||| ||||||||||||  ||||| ||||||||||| ||| ||||||||  |||| ||||||||||  ||| |||||||||||    
T  20126206 gctaccaaaaagaagatgcatcttgttgatataggtagtatcaaaccattcttataagc--cttccttcaaccatgtagtctcatacctacac 20126296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 389 - 480
Target Start/End: Original strand, 14771745 - 14771834
Alignment:
Q  389 taccacaaagaatatgcatcttgtttgtatagttagtatcaaacaattgttataagcctcttctttcaaccatgatgtcccatacctacacg 480  Q
    ||||| |||||||||| ||||||||  ||||| ||||| ||||||||| |||||||  ||||| ||||||||||  ||| ||||||||||||    
T  14771745 taccaaaaagaatatggatcttgttgatataggtagtaccaaacaattcttataag--tcttccttcaaccatgcagtctcatacctacacg 14771834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 289 - 365
Target Start/End: Original strand, 17731027 - 17731103
Alignment:
Q  289 tgttttgtcctcactcacacgcttttcgtgaaactttcctgaaggtcacccatcccaaaattgctccaagtcaagca 365  Q
    |||||||||||||||  |||||||  ||  ||||||||| | |||||||| ||| ||||||||||||||||||||||    
T  17731027 tgttttgtcctcacttgcacgcttaccgataaactttccggtaggtcacctatctcaaaattgctccaagtcaagca 17731103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 395 - 480
Target Start/End: Original strand, 20896720 - 20896803
Alignment:
Q  395 aaagaatatgcatcttgtttgtatagttagtatcaaacaattgttataagcctcttctttcaaccatgatgtcccatacctacacg 480  Q
    |||||| ||||||||||||  ||||| ||||| ||||||||| ||||||||  |||| ||||||||||  ||| ||||||||||||    
T  20896720 aaagaagatgcatcttgttgatataggtagtaccaaacaattcttataagc--cttccttcaaccatgtagtctcatacctacacg 20896803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 331 - 365
Target Start/End: Complemental strand, 28780296 - 28780262
Alignment:
Q  331 aggtcacccatcccaaaattgctccaagtcaagca 365  Q
    |||||||||||||||||||||||||||||||||||    
T  28780296 aggtcacccatcccaaaattgctccaagtcaagca 28780262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 289 - 369
Target Start/End: Complemental strand, 17205566 - 17205486
Alignment:
Q  289 tgttttgtcctcactcacacgcttttcgtgaaactttcctgaaggtcacccatcccaaaattgctccaagtcaagcatgtt 369  Q
    |||||||| ||||||| || | ||| ||  |||||||| | |||||| |||||||||||||| |||||| |||||||||||    
T  17205566 tgttttgttctcactcgcatgttttccgaaaaactttcataaaggtctcccatcccaaaattactccaaatcaagcatgtt 17205486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 311 - 362
Target Start/End: Original strand, 9440797 - 9440848
Alignment:
Q  311 ttttcgtgaaactttcctgaaggtcacccatcccaaaattgctccaagtcaa 362  Q
    |||||| ||||||| |  |||||||||||||||||||||||||| |||||||    
T  9440797 ttttcgggaaacttccaagaaggtcacccatcccaaaattgctcaaagtcaa 9440848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 318 - 365
Target Start/End: Complemental strand, 16520167 - 16520120
Alignment:
Q  318 gaaactttcctgaaggtcacccatcccaaaattgctccaagtcaagca 365  Q
    ||||||| || | |||||||||||| ||||||||||||||||||||||    
T  16520167 gaaacttcccggcaggtcacccatctcaaaattgctccaagtcaagca 16520120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 373 - 475
Target Start/End: Complemental strand, 21312107 - 21312007
Alignment:
Q  373 ttcttatgatttcggctaccacaaagaatatgcatcttgtttgtatagttagtatcaaacaattgttataagcctcttctttcaaccatgatgtcccata 472  Q
    |||||||||  | |||||||| |||||| ||||||||||||  ||||| ||||| | ||||||| ||||||||  |||| ||||||||||  ||| ||||    
T  21312107 ttcttatgaaatgggctaccaaaaagaagatgcatcttgttgatataggtagtacctaacaattcttataagc--cttccttcaaccatgcagtctcata 21312010  T
Q  473 cct 475  Q
    |||    
T  21312009 cct 21312007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 289 - 348
Target Start/End: Original strand, 31416006 - 31416065
Alignment:
Q  289 tgttttgtcctcactcacacgcttttcgtgaaactttcctgaaggtcacccatcccaaaa 348  Q
    ||||||||||||||||||||| |||||| ||||||||||  ||| ||  |||||||||||    
T  31416006 tgttttgtcctcactcacacgtttttcgagaaactttccataagatcgtccatcccaaaa 31416065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 292 - 362
Target Start/End: Complemental strand, 1991778 - 1991708
Alignment:
Q  292 tttgtcctcactcacacgcttttcgtgaaactttcctgaaggtcacccatcccaaaattgctccaagtcaa 362  Q
    |||||| ||||||||| ||||||||  ||||||| | ||||||||||||||| |||| | |||||| ||||    
T  1991778 tttgtcttcactcacatgcttttcggaaaacttttcagaaggtcacccatccaaaaactactccaaatcaa 1991708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 395 - 480
Target Start/End: Original strand, 2681248 - 2681331
Alignment:
Q  395 aaagaatatgcatcttgtttgtatagttagtatcaaacaattgttataagcctcttctttcaaccatgatgtcccatacctacacg 480  Q
    |||||| ||||||||||||  ||| | ||||| ||||||||| |||||||  ||||| ||||||||||  |||||| |||||||||    
T  2681248 aaagaagatgcatcttgttgatatgggtagtaccaaacaattcttataag--tcttcattcaaccatgcagtcccaaacctacacg 2681331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 371 - 480
Target Start/End: Original strand, 6330920 - 6331027
Alignment:
Q  371 agttcttatgatttcggctaccacaaagaatatgcatcttgtttgtatagttagtatcaaacaattgttataagcctcttctttcaaccatgatgtccca 470  Q
    |||||||||||  |  ||||||  |||||| |||||| |||||  ||||| ||||| ||||||||| |||||||  ||||| ||||||||||  ||| ||    
T  6330920 agttcttatgaaatgagctaccgaaaagaagatgcatattgttgatataggtagtaccaaacaattcttataag--tcttccttcaaccatgtagtctca 6331017  T
Q  471 tacctacacg 480  Q
    ||||||||||    
T  6331018 tacctacacg 6331027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 291 - 365
Target Start/End: Original strand, 9440229 - 9440303
Alignment:
Q  291 ttttgtcctcactcacacgcttttcgtgaaactttcctgaaggtcacccatcccaaaattgctccaagtcaagca 365  Q
    ||||||| ||| ||||||| ||||   ||||||| ||  |||||||||||||| ||||||||||||| |||||||    
T  9440229 ttttgtcatcattcacacgtttttttagaaacttcccataaggtcacccatccaaaaattgctccaaatcaagca 9440303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 289 - 479
Target Start/End: Complemental strand, 11062513 - 11062317
Alignment:
Q  289 tgttttgtcctcactcacacgcttttcgtgaaactttcctgaaggtcacccatcccaaaattgctccaagtcaagca--------tgttaagttcttatg 380  Q
    ||||||||||||||||||  | || ||| ||||||||||   ||||||||||||| || | | ||||||||||||||        |||  ||||||||||    
T  11062513 tgttttgtcctcactcacgggtttatcgggaaactttccgataggtcacccatccaaagactactccaagtcaagcacgcttaactgtggagttcttatg 11062414  T
Q  381 atttcggctaccacaaagaatatgcatcttgtttgtatagttagtatcaaacaattgttataagcctcttctttcaaccatgatgtcccatacctacac 479  Q
       | |||||||| |||||| ||||||||||||  ||||| |||||  ||||| || ||||||||  |||| ||||||||||  ||  |||||||||||    
T  11062413 gaatgggctaccaaaaagaagatgcatcttgttgatataggtagtacaaaacacttcttataagc--cttccttcaaccatgtagtttcatacctacac 11062317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 331 - 365
Target Start/End: Original strand, 20896648 - 20896682
Alignment:
Q  331 aggtcacccatcccaaaattgctccaagtcaagca 365  Q
    |||||||||||||||||||||||||||| ||||||    
T  20896648 aggtcacccatcccaaaattgctccaagccaagca 20896682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 395 - 447
Target Start/End: Complemental strand, 20735809 - 20735757
Alignment:
Q  395 aaagaatatgcatcttgtttgtatagttagtatcaaacaattgttataagcct 447  Q
    |||||| ||||||||||||  ||||  ||||||||||||||| ||||||||||    
T  20735809 aaagaagatgcatcttgttgatataagtagtatcaaacaattcttataagcct 20735757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 387 - 478
Target Start/End: Original strand, 31821716 - 31821805
Alignment:
Q  387 gctaccacaaagaatatgcatcttgtttgtatagttagtatcaaacaattgttataagcctcttctttcaaccatgatgtcccatacctaca 478  Q
    ||||||| ||| || ||||||||||||  ||||||||||| |||| |||| ||||||||   ||| ||||||||||  ||| ||||||||||    
T  31821716 gctaccaaaaaaaagatgcatcttgttgatatagttagtaccaaataattcttataagc--attccttcaaccatgtagtctcatacctaca 31821805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0322 (Bit Score: 60; Significance: 3e-25; HSPs: 1)
Name: scaffold0322
Description:

Target: scaffold0322; HSP #1
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 289 - 480
Target Start/End: Complemental strand, 19194 - 18997
Alignment:
Q  289 tgttttgtcctcactcacacgcttttcgtgaaactttcctgaaggtcacccatcccaaaattgctccaagtcaagca--------tgttaagttcttatg 380  Q
    ||||||||||||||||||||||||  || ||||||| || | |||||||||||||||||||||||||||||||||||        |||  ||||||||||    
T  19194 tgttttgtcctcactcacacgcttaccgggaaacttcccggtaggtcacccatcccaaaattgctccaagtcaagcacgcttaactgtggagttcttatg 19095  T
Q  381 atttcggctaccacaaagaatatgcatcttgtttgtatagttagtatcaaacaattgttataagcctcttctttcaaccatgatgtcccatacctacacg 480  Q
    |  |  ||||||  |||||| ||| ||||||||  ||||| ||||| ||||||||| ||||||||  |||| ||||||||||  ||||||||||| ||||    
T  19094 aaatgagctaccgaaaagaagatgaatcttgttgatataggtagtaccaaacaattcttataagc--cttccttcaaccatgcagtcccatacctgcacg 18997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 60; Significance: 3e-25; HSPs: 41)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 289 - 480
Target Start/End: Original strand, 20057637 - 20057834
Alignment:
Q  289 tgttttgtcctcactcacacgcttttcgtgaaactttcctgaaggtcacccatcccaaaattgctccaagtcaagca--------tgttaagttcttatg 380  Q
    |||||||||||||||| |||||||  || ||||||| || | |||||||||||||||||||||||||||||||||||        |||  ||||||||||    
T  20057637 tgttttgtcctcactcgcacgcttaccgggaaacttcccggtaggtcacccatcccaaaattgctccaagtcaagcacgcttaactgtggagttcttatg 20057736  T
Q  381 atttcggctaccacaaagaatatgcatcttgtttgtatagttagtatcaaacaattgttataagcctcttctttcaaccatgatgtcccatacctacacg 480  Q
       |  ||||||  |||||| ||||||||||||  ||||| ||||| ||||||||| ||||||||  |||||||||||||||  ||||||||||| ||||    
T  20057737 gaatgagctaccgaaaagaagatgcatcttgttgatataggtagtaccaaacaattcttataagc--cttctttcaaccatgcagtcccatacctgcacg 20057834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 289 - 480
Target Start/End: Original strand, 20054454 - 20054651
Alignment:
Q  289 tgttttgtcctcactcacacgcttttcgtgaaactttcctgaaggtcacccatcccaaaattgctccaagtcaagca--------tgttaagttcttatg 380  Q
    |||||||||||||||| |||||||  || ||||||| || | |||||||||||||||||||||||||||||||||||        |||  ||||||||||    
T  20054454 tgttttgtcctcactcgcacgcttaccgggaaacttcccggtaggtcacccatcccaaaattgctccaagtcaagcacgcttaactgtggagttcttatg 20054553  T
Q  381 atttcggctaccacaaagaatatgcatcttgtttgtatagttagtatcaaacaattgttataagcctcttctttcaaccatgatgtcccatacctacacg 480  Q
       |  ||||||  |||||| ||||||||||||  ||||| ||||| ||||||||| ||||||||  |||| ||||||||||  ||||||||||| ||||    
T  20054554 gaatgagctaccgaaaagaagatgcatcttgttgatataggtagtaccaaacaattcttataagc--cttccttcaaccatgcagtcccatacctgcacg 20054651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 289 - 480
Target Start/End: Original strand, 20054910 - 20055107
Alignment:
Q  289 tgttttgtcctcactcacacgcttttcgtgaaactttcctgaaggtcacccatcccaaaattgctccaagtcaagca--------tgttaagttcttatg 380  Q
    |||||||||||||||| |||||||  || ||||||| || | |||||||||||||||||||||||||||||||||||        |||  ||||||||||    
T  20054910 tgttttgtcctcactcgcacgcttaccgggaaacttcccggtaggtcacccatcccaaaattgctccaagtcaagcacgcttaactgtggagttcttatg 20055009  T
Q  381 atttcggctaccacaaagaatatgcatcttgtttgtatagttagtatcaaacaattgttataagcctcttctttcaaccatgatgtcccatacctacacg 480  Q
       |  ||||||  |||||| ||||||||||||  ||||| ||||| ||||||||| ||||||||  |||| ||||||||||  ||||||||||| ||||    
T  20055010 gaatgagctaccgaaaagaagatgcatcttgttgatataggtagtaccaaacaattcttataagc--cttccttcaaccatgcagtcccatacctgcacg 20055107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 289 - 480
Target Start/End: Original strand, 20055366 - 20055563
Alignment:
Q  289 tgttttgtcctcactcacacgcttttcgtgaaactttcctgaaggtcacccatcccaaaattgctccaagtcaagca--------tgttaagttcttatg 380  Q
    |||||||||||||||| |||||||  || ||||||| || | |||||||||||||||||||||||||||||||||||        |||  ||||||||||    
T  20055366 tgttttgtcctcactcgcacgcttaccgggaaacttcccggtaggtcacccatcccaaaattgctccaagtcaagcacgcttaactgtggagttcttatg 20055465  T
Q  381 atttcggctaccacaaagaatatgcatcttgtttgtatagttagtatcaaacaattgttataagcctcttctttcaaccatgatgtcccatacctacacg 480  Q
       |  ||||||  |||||| ||||||||||||  ||||| ||||| ||||||||| ||||||||  |||| ||||||||||  ||||||||||| ||||    
T  20055466 gaatgagctaccgaaaagaagatgcatcttgttgatataggtagtaccaaacaattcttataagc--cttccttcaaccatgcagtcccatacctgcacg 20055563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 289 - 480
Target Start/End: Original strand, 20055822 - 20056019
Alignment:
Q  289 tgttttgtcctcactcacacgcttttcgtgaaactttcctgaaggtcacccatcccaaaattgctccaagtcaagca--------tgttaagttcttatg 380  Q
    |||||||||||||||| |||||||  || ||||||| || | |||||||||||||||||||||||||||||||||||        |||  ||||||||||    
T  20055822 tgttttgtcctcactcgcacgcttaccgggaaacttcccggtaggtcacccatcccaaaattgctccaagtcaagcacgcttaactgtggagttcttatg 20055921  T
Q  381 atttcggctaccacaaagaatatgcatcttgtttgtatagttagtatcaaacaattgttataagcctcttctttcaaccatgatgtcccatacctacacg 480  Q
       |  ||||||  |||||| ||||||||||||  ||||| ||||| ||||||||| ||||||||  |||| ||||||||||  ||||||||||| ||||    
T  20055922 gaatgagctaccgaaaagaagatgcatcttgttgatataggtagtaccaaacaattcttataagc--cttccttcaaccatgcagtcccatacctgcacg 20056019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 289 - 480
Target Start/End: Original strand, 20056278 - 20056475
Alignment:
Q  289 tgttttgtcctcactcacacgcttttcgtgaaactttcctgaaggtcacccatcccaaaattgctccaagtcaagca--------tgttaagttcttatg 380  Q
    |||||||||||||||| |||||||  || ||||||| || | |||||||||||||||||||||||||||||||||||        |||  ||||||||||    
T  20056278 tgttttgtcctcactcgcacgcttaccgggaaacttcccggtaggtcacccatcccaaaattgctccaagtcaagcacgcttaactgtggagttcttatg 20056377  T
Q  381 atttcggctaccacaaagaatatgcatcttgtttgtatagttagtatcaaacaattgttataagcctcttctttcaaccatgatgtcccatacctacacg 480  Q
       |  ||||||  |||||| ||||||||||||  ||||| ||||| ||||||||| ||||||||  |||| ||||||||||  ||||||||||| ||||    
T  20056378 gaatgagctaccgaaaagaagatgcatcttgttgatataggtagtaccaaacaattcttataagc--cttccttcaaccatgcagtcccatacctgcacg 20056475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 289 - 480
Target Start/End: Original strand, 20057181 - 20057378
Alignment:
Q  289 tgttttgtcctcactcacacgcttttcgtgaaactttcctgaaggtcacccatcccaaaattgctccaagtcaagca--------tgttaagttcttatg 380  Q
    |||||||||||||||| |||||||  || ||||||| || | |||||||||||||||||||||||||||||||||||        |||  ||||||||||    
T  20057181 tgttttgtcctcactcgcacgcttaccgggaaacttcccggtaggtcacccatcccaaaattgctccaagtcaagcacgcttaactgtggagttcttatg 20057280  T
Q  381 atttcggctaccacaaagaatatgcatcttgtttgtatagttagtatcaaacaattgttataagcctcttctttcaaccatgatgtcccatacctacacg 480  Q
       |  ||||||  |||||| ||||||||||||  ||||| ||||| ||||||||| ||||||||  |||| ||||||||||  ||||||||||| ||||    
T  20057281 gaatgagctaccgaaaagaagatgcatcttgttgatataggtagtaccaaacaattcttataagc--cttccttcaaccatgcagtcccatacctgcacg 20057378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 289 - 480
Target Start/End: Complemental strand, 38341134 - 38340937
Alignment:
Q  289 tgttttgtcctcactcacacgcttttcgtgaaactttcctgaaggtcacccatcccaaaattgctccaagtcaagca--------tgttaagttcttatg 380  Q
    |||||||||||||||| |||||||  || ||||||| || | |||||||||||||||||||||||||||||||||||        ||| |||||||||||    
T  38341134 tgttttgtcctcactcgcacgcttaccgggaaacttcccagtaggtcacccatcccaaaattgctccaagtcaagcacgcttaactgtgaagttcttatg 38341035  T
Q  381 atttcggctaccacaaagaatatgcatcttgtttgtatagttagtatcaaacaattgttataagcctcttctttcaaccatgatgtcccatacctacacg 480  Q
       |  ||||||  || ||| ||||||||||||  ||||| ||||| ||||||||| ||||||||  |||| ||||||||||  ||||||||||| ||||    
T  38341034 gaatgagctaccgaaatgaagatgcatcttgttgatataggtagtaccaaacaattcttataagc--cttccttcaaccatgcagtcccatacctgcacg 38340937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 289 - 365
Target Start/End: Original strand, 46693653 - 46693729
Alignment:
Q  289 tgttttgtcctcactcacacgcttttcgtgaaactttcctgaaggtcacccatcccaaaattgctccaagtcaagca 365  Q
    |||||||||||||||| ||||| |  || |||||||||| | |||||||||||||||||||||||||||||||||||    
T  46693653 tgttttgtcctcactcgcacgcataccgggaaactttccggtaggtcacccatcccaaaattgctccaagtcaagca 46693729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 289 - 480
Target Start/End: Original strand, 20845579 - 20845776
Alignment:
Q  289 tgttttgtcctcactcacacgcttttcgtgaaactttcctgaaggtcacccatcccaaaattgctccaagtcaagca--------tgttaagttcttatg 380  Q
    |||||||||||||||| |||||||  || ||||||| || | |||||||||||||||||||| ||||||||||||||        |||  ||||||||||    
T  20845579 tgttttgtcctcactcgcacgcttaccgggaaacttcccggtaggtcacccatcccaaaatttctccaagtcaagcacgcttaactgtggagttcttatg 20845678  T
Q  381 atttcggctaccacaaagaatatgcatcttgtttgtatagttagtatcaaacaattgttataagcctcttctttcaaccatgatgtcccatacctacacg 480  Q
       |  ||||||  |||||| ||||||||||||  ||||| ||||| ||||||||| ||||||||  |||| ||||||||||  ||| ||||||| ||||    
T  20845679 gaatgagctaccgaaaagaagatgcatcttgttgatataggtagtaacaaacaattcttataagc--cttccttcaaccatgcagtctcatacctgcacg 20845776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 286 - 480
Target Start/End: Original strand, 20053995 - 20054195
Alignment:
Q  286 gcatgttttgtcctcactcacacgcttttcgtgaaactttcctgaaggtcacccatcccaaaattgctccaagtcaagca--------tgttaagttctt 377  Q
    ||||||||||||||||||| |||||||  |   |||||| || | ||||||||||||||||||||||||| |||||||||        |||  |||||||    
T  20053995 gcatgttttgtcctcactcgcacgcttaccagaaaacttcccggtaggtcacccatcccaaaattgctcctagtcaagcacgcttaactgtggagttctt 20054094  T
Q  378 atgatttcggctaccacaaagaatatgcatcttgtttgtatagttagtatcaaacaattgttataagcctcttctttcaaccatgatgtcccatacctac 477  Q
    |||   |  ||||||  |||||| ||||||||||||  ||||| ||||| ||||||||| ||||||||  |||| ||||||||||  ||||||||||| |    
T  20054095 atggaatgagctaccgaaaagaagatgcatcttgttgatataggtagtaccaaacaattcttataagc--cttccttcaaccatgcagtcccatacctgc 20054192  T
Q  478 acg 480  Q
    |||    
T  20054193 acg 20054195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 289 - 362
Target Start/End: Original strand, 20056734 - 20056807
Alignment:
Q  289 tgttttgtcctcactcacacgcttttcgtgaaactttcctgaaggtcacccatcccaaaattgctccaagtcaa 362  Q
    |||||||||||||||| |||||||  || ||||||| || | ||||||||||||||||||||||||||||||||    
T  20056734 tgttttgtcctcactcgcacgcttaccgggaaacttcccggtaggtcacccatcccaaaattgctccaagtcaa 20056807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 289 - 365
Target Start/End: Original strand, 50002993 - 50003069
Alignment:
Q  289 tgttttgtcctcactcacacgcttttcgtgaaactttcctgaaggtcacccatcccaaaattgctccaagtcaagca 365  Q
    |||||||||||||||| |||||||  || ||||||| || | ||||||||||||| |||||||||||||||||||||    
T  50002993 tgttttgtcctcactcgcacgcttaccgggaaacttcccggtaggtcacccatccaaaaattgctccaagtcaagca 50003069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 289 - 480
Target Start/End: Original strand, 35759526 - 35759723
Alignment:
Q  289 tgttttgtcctcactcacacgcttttcgtgaaactttcctgaaggtcacccatcccaaaattgctccaagtcaagcatgtt--------aagttcttatg 380  Q
    |||||||||||||||| |||||||  ||  |||||| || | |||||||| |||||||||| ||||||||||||||| |||        |||||||||||    
T  35759526 tgttttgtcctcactcgcacgcttaccgaaaaacttcccggtaggtcaccaatcccaaaatagctccaagtcaagcacgtttaactatgaagttcttatg 35759625  T
Q  381 atttcggctaccacaaagaatatgcatcttgtttgtatagttagtatcaaacaattgttataagcctcttctttcaaccatgatgtcccatacctacacg 480  Q
       |  ||||||  |||||| ||||||||||||  ||||| ||||| ||||||||| ||||||||   ||| ||||||||||  ||||||||||| ||||    
T  35759626 gaatgagctaccgaaaagaagatgcatcttgttgatataggtagtaccaaacaattcttataagc--tttccttcaaccatgcagtcccatacctgcacg 35759723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 289 - 365
Target Start/End: Original strand, 16451851 - 16451927
Alignment:
Q  289 tgttttgtcctcactcacacgcttttcgtgaaactttcctgaaggtcacccatcccaaaattgctccaagtcaagca 365  Q
    ||||||||| |||| | ||||||| | |  ||||||||| | |||||||||||||||||||||||||||||||||||    
T  16451851 tgttttgtcatcacgcgcacgcttattggaaaactttccggtaggtcacccatcccaaaattgctccaagtcaagca 16451927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 289 - 365
Target Start/End: Original strand, 16461004 - 16461080
Alignment:
Q  289 tgttttgtcctcactcacacgcttttcgtgaaactttcctgaaggtcacccatcccaaaattgctccaagtcaagca 365  Q
    ||||||||| |||| | ||||||| | |  ||||||||| | |||||||||||||||||||||||||||||||||||    
T  16461004 tgttttgtcatcacgcgcacgcttattggaaaactttccggtaggtcacccatcccaaaattgctccaagtcaagca 16461080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 289 - 365
Target Start/End: Original strand, 20060258 - 20060334
Alignment:
Q  289 tgttttgtcctcactcacacgcttttcgtgaaactttcctgaaggtcacccatcccaaaattgctccaagtcaagca 365  Q
    |||||||||||||||| |||||||  ||  |||||| || | ||||||||||||||||||||| |||||||||||||    
T  20060258 tgttttgtcctcactcgcacgcttaccggaaaacttcccggtaggtcacccatcccaaaattgatccaagtcaagca 20060334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 286 - 365
Target Start/End: Complemental strand, 23180961 - 23180882
Alignment:
Q  286 gcatgttttgtcctcactcacacgcttttcgtgaaactttcctgaaggtcacccatcccaaaattgctccaagtcaagca 365  Q
    |||||||||||| |||||| |||  |||| |  ||||||||| |||||| ||||||||||||||| ||||||||||||||    
T  23180961 gcatgttttgtcgtcactcgcacattttttgaaaaactttccagaaggtaacccatcccaaaatttctccaagtcaagca 23180882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 387 - 475
Target Start/End: Complemental strand, 2328437 - 2328351
Alignment:
Q  387 gctaccacaaagaatatgcatcttgtttgtatagttagtatcaaacaattgttataagcctcttctttcaaccatgatgtcccatacct 475  Q
    ||||||| |||||| ||||||||||||  ||||| ||||| ||||||||| ||||||||  |||| ||||||||||  |||||||||||    
T  2328437 gctaccaaaaagaagatgcatcttgttaatataggtagtaccaaacaattcttataagc--cttccttcaaccatgcagtcccatacct 2328351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 395 - 531
Target Start/End: Original strand, 20061223 - 20061353
Alignment:
Q  395 aaagaatatgcatcttgtttgtatagttagtatcaaacaattgttataagcctcttctttcaaccatgatgtcccatacctacacgtacaatatcaggat 494  Q
    |||||| ||||||||||||  ||||| ||||| ||||||||| ||||||||   ||| ||||||||||  ||||||||||| ||||    |  |||||||    
T  20061223 aaagaagatgcatcttgttgatataggtagtaccaaacaattcttataagc--tttccttcaaccatgcagtcccatacctgcacg----acctcaggat 20061316  T
Q  495 ccctctcattcttatgtgaattcagttt-gcctagaag 531  Q
    |||||||||||| ||||| ||||||||| |||||||||    
T  20061317 ccctctcattctgatgtg-attcagtttagcctagaag 20061353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 289 - 362
Target Start/End: Original strand, 50002625 - 50002698
Alignment:
Q  289 tgttttgtcctcactcacacgcttttcgtgaaactttcctgaaggtcacccatcccaaaattgctccaagtcaa 362  Q
    |||||||||||||||| |||||||  || | ||||| || | |||||| |||||||||||||||||||||||||    
T  50002625 tgttttgtcctcactcgcacgcttaccggggaacttcccggtaggtcatccatcccaaaattgctccaagtcaa 50002698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 289 - 478
Target Start/End: Complemental strand, 52250434 - 52250239
Alignment:
Q  289 tgttttgtcctcactcacacgcttttcgtgaaactttcctgaaggtcacccatcccaaaattgctccaagtcaagca--------tgttaagttcttatg 380  Q
    |||||||||||||||| ||| |||  || ||||||| || | ||||||||||| ||||||||||| |||||||||||        |||  ||||||||||    
T  52250434 tgttttgtcctcactcgcacacttaccgggaaacttcccggtaggtcacccattccaaaattgcttcaagtcaagcacgcttaactgtggagttcttatg 52250335  T
Q  381 atttcggctaccacaaagaatatgcatcttgtttgtatagttagtatcaaacaattgttataagcctcttctttcaaccatgatgtcccatacctaca 478  Q
       |  ||||||  |||||| ||||||||||||  ||||| ||||| | ||||||| ||||||||  |||| ||| ||||||  ||||||||||||||    
T  52250334 gaatgagctaccgaaaagaagatgcatcttgttgatataggtagtacccaacaattcttataagc--cttccttcgaccatgtagtcccatacctaca 52250239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 289 - 365
Target Start/End: Complemental strand, 52250771 - 52250695
Alignment:
Q  289 tgttttgtcctcactcacacgcttttcgtgaaactttcctgaaggtcacccatcccaaaattgctccaagtcaagca 365  Q
    ||||||||| |||||| ||| |||  || ||||||| || | ||||||||||||||||||||||| |||||||||||    
T  52250771 tgttttgtcttcactcgcacacttaccgggaaacttcccggtaggtcacccatcccaaaattgcttcaagtcaagca 52250695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 289 - 365
Target Start/End: Complemental strand, 52251108 - 52251032
Alignment:
Q  289 tgttttgtcctcactcacacgcttttcgtgaaactttcctgaaggtcacccatcccaaaattgctccaagtcaagca 365  Q
    ||||||||| |||||| ||| |||  || ||||||| || | ||||||||||||||||||||||| |||||||||||    
T  52251108 tgttttgtcttcactcgcacacttaccgggaaacttcccggtaggtcacccatcccaaaattgcttcaagtcaagca 52251032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 386 - 480
Target Start/End: Complemental strand, 7548214 - 7548122
Alignment:
Q  386 ggctaccacaaagaatatgcatcttgtttgtatagttagtatcaaacaattgttataagcctcttctttcaaccatgatgtcccatacctacacg 480  Q
    |||||||| |||||||||||||||||||  |||||||| || ||||||||| |||||||  ||||| || || ||||  ||| ||||||||||||    
T  7548214 ggctaccaaaaagaatatgcatcttgttgatatagttaataccaaacaatttttataag--tcttcctttaatcatgtagtctcatacctacacg 7548122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 386 - 480
Target Start/End: Original strand, 43057088 - 43057180
Alignment:
Q  386 ggctaccacaaagaatatgcatcttgtttgtatagttagtatcaaacaattgttataagcctcttctttcaaccatgatgtcccatacctacacg 480  Q
    |||||||  |||||| ||||||||||||  ||||| ||||||||||||||| || |||||  |||| ||||||||||  ||| ||||||||||||    
T  43057088 ggctaccgaaaagaagatgcatcttgttgatataggtagtatcaaacaattcttctaagc--cttccttcaaccatgtagtcacatacctacacg 43057180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 386 - 480
Target Start/End: Original strand, 43057546 - 43057638
Alignment:
Q  386 ggctaccacaaagaatatgcatcttgtttgtatagttagtatcaaacaattgttataagcctcttctttcaaccatgatgtcccatacctacacg 480  Q
    |||||||  |||||| ||||||||||||  ||||| ||||| ||||||||| ||||||||  |||| ||||||||||  ||| ||||||||||||    
T  43057546 ggctaccgaaaagaagatgcatcttgttaatataggtagtaccaaacaattcttataagc--cttccttcaaccatgtagtctcatacctacacg 43057638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 291 - 365
Target Start/End: Original strand, 51372794 - 51372868
Alignment:
Q  291 ttttgtcctcactcacacgcttttcgtgaaactttcctga-aggtcacccatcccaaaattgctccaagtcaagca 365  Q
    |||||||||||||| |||||||  ||  |||||| ||||| |||||||||||||||||||||||| ||||||||||    
T  51372794 ttttgtcctcactcgcacgcttaccgaaaaactt-cctgataggtcacccatcccaaaattgctcaaagtcaagca 51372868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 395 - 480
Target Start/End: Original strand, 50002739 - 50002822
Alignment:
Q  395 aaagaatatgcatcttgtttgtatagttagtatcaaacaattgttataagcctcttctttcaaccatgatgtcccatacctacacg 480  Q
    |||||| ||||||||||||  ||||| ||||| ||||||||| ||||||||  |||| ||||||||||  ||||||| ||||||||    
T  50002739 aaagaagatgcatcttgttgatataggtagtaccaaacaattcttataagc--cttccttcaaccatgcagtcccatgcctacacg 50002822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 286 - 367
Target Start/End: Original strand, 7229858 - 7229939
Alignment:
Q  286 gcatgttttgtcctcactcacacgcttttcgtgaaactttcctgaaggtcacccatcccaaaattgctccaagtcaagcatg 367  Q
    ||||||||| ||||||||  |||||||||||  |||||||    ||||||||| |||| |||||||||||||||||| ||||    
T  7229858 gcatgttttatcctcactttcacgcttttcgaaaaactttatataaggtcaccaatcctaaaattgctccaagtcaaacatg 7229939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 332 - 480
Target Start/End: Original strand, 50002246 - 50002400
Alignment:
Q  332 ggtcacccatcccaaaattgctccaagtcaagca--------tgttaagttcttatgatttcggctaccacaaagaatatgcatcttgtttgtatagtta 423  Q
    ||||||| ||||||||||||||||||||||||||        |||  ||||||||||   |  ||||||  |||||| ||||||||||||  || || ||    
T  50002246 ggtcaccaatcccaaaattgctccaagtcaagcacactcaactgtggagttcttatggaatgagctaccgaaaagaagatgcatcttgttgataaaggta 50002345  T
Q  424 gtatcaaacaattgttataagcctcttctttcaaccatgatgtcccatacctacacg 480  Q
    ||| ||||||||| ||||||||  |||| ||||||||||  ||||||| ||||||||    
T  50002346 gtaccaaacaattcttataagc--cttccttcaaccatgtagtcccatgcctacacg 50002400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 330 - 365
Target Start/End: Complemental strand, 8278144 - 8278109
Alignment:
Q  330 aaggtcacccatcccaaaattgctccaagtcaagca 365  Q
    |||||||||||||||||||||||| |||||||||||    
T  8278144 aaggtcacccatcccaaaattgcttcaagtcaagca 8278109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 289 - 363
Target Start/End: Complemental strand, 7547865 - 7547791
Alignment:
Q  289 tgttttgtcctcactcacacgcttttcgtgaaactttcctgaaggtcacccatcccaaaattgctccaagtcaag 363  Q
    ||||||||||| |||| ||||||| |||  ||||||||| | ||||||||||||| || | | ||||||||||||    
T  7547865 tgttttgtccttactcgcacgcttatcgaaaaactttccggtaggtcacccatccaaacactactccaagtcaag 7547791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 395 - 479
Target Start/End: Complemental strand, 12728106 - 12728023
Alignment:
Q  395 aaagaatatgcatcttgtttgtatagttagtatc-aaacaattgttataagcctcttctttcaaccatgatgtcccatacctacac 479  Q
    |||||| ||||||||||||  |||||  |||| | |||||||| |||||||  ||||| |||||||||| ||||||||||||||||    
T  12728106 aaagaagatgcatcttgttgatataggcagtaaccaaacaattcttataag--tcttccttcaaccatgttgtcccatacctacac 12728023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 388 - 461
Target Start/End: Original strand, 30872975 - 30873046
Alignment:
Q  388 ctaccacaaagaatatgcatcttgtttgtatagttagtatcaaacaattgttataagcctcttctttcaaccat 461  Q
    |||||| |||||| ||||||||||||  ||||| ||||||||||||||| ||| |||  ||||| |||||||||    
T  30872975 ctaccaaaaagaagatgcatcttgttgatataggtagtatcaaacaattcttaaaag--tcttccttcaaccat 30873046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 331 - 365
Target Start/End: Original strand, 35760874 - 35760908
Alignment:
Q  331 aggtcacccatcccaaaattgctccaagtcaagca 365  Q
    |||| ||||||||||||||||||||||||||||||    
T  35760874 aggttacccatcccaaaattgctccaagtcaagca 35760908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 387 - 445
Target Start/End: Original strand, 35760938 - 35760996
Alignment:
Q  387 gctaccacaaagaatatgcatcttgtttgtatagttagtatcaaacaattgttataagc 445  Q
    ||||||| |||||| ||||||||||||  ||||| ||||| ||||||||| ||||||||    
T  35760938 gctaccaaaaagaagatgcatcttgttgatataggtagtaccaaacaattcttataagc 35760996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 395 - 436
Target Start/End: Complemental strand, 2634580 - 2634539
Alignment:
Q  395 aaagaatatgcatcttgtttgtatagttagtatcaaacaatt 436  Q
    |||||| ||||||||||||||||||| ||||| |||||||||    
T  2634580 aaagaagatgcatcttgtttgtatagctagtaccaaacaatt 2634539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 387 - 444
Target Start/End: Complemental strand, 12883646 - 12883589
Alignment:
Q  387 gctaccacaaagaatatgcatcttgtttgtatagttagtatcaaacaattgttataag 444  Q
    ||||||| |||||| ||||||||||||  ||||| ||||| ||||||||| |||||||    
T  12883646 gctaccaaaaagaaaatgcatcttgttgatataggtagtaccaaacaattcttataag 12883589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 330 - 362
Target Start/End: Complemental strand, 16907421 - 16907389
Alignment:
Q  330 aaggtcacccatcccaaaattgctccaagtcaa 362  Q
    ||||||||||||| |||||||||||||||||||    
T  16907421 aaggtcacccatctcaaaattgctccaagtcaa 16907389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 395 - 447
Target Start/End: Original strand, 46693767 - 46693819
Alignment:
Q  395 aaagaatatgcatcttgtttgtatagttagtatcaaacaattgttataagcct 447  Q
    |||||| ||||||||||||  ||||| ||||| ||||||||| ||||||||||    
T  46693767 aaagaagatgcatcttgttgatataggtagtaccaaacaatttttataagcct 46693819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0243 (Bit Score: 59; Significance: 1e-24; HSPs: 1)
Name: scaffold0243
Description:

Target: scaffold0243; HSP #1
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 289 - 475
Target Start/End: Complemental strand, 1448 - 1256
Alignment:
Q  289 tgttttgtcctcactcacacgcttttcgtgaaactttcctgaaggtcacccatcccaaaattgctccaagtcaagca--------tgttaagttcttatg 380  Q
    |||||||||||||||| |||||||  || ||||||| || | |||||||||||||||||||||||||||||||||||        |||  ||||||||||    
T  1448 tgttttgtcctcactcgcacgcttaccgggaaacttcccggtaggtcacccatcccaaaattgctccaagtcaagcacgcttaactgtggagttcttatg 1349  T
Q  381 atttcggctaccacaaagaatatgcatcttgtttgtatagttagtatcaaacaattgttataagcctcttctttcaaccatgatgtcccatacct 475  Q
       |  ||||||  |||||| ||||||||||||| ||||| ||||| ||||||||| ||||||||  |||| ||||||||||  |||||||||||    
T  1348 gaatgagctaccgaaaagaagatgcatcttgtttatataggtagtaccaaacaattcttataagc--cttccttcaaccatgcagtcccatacct 1256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 58; Significance: 4e-24; HSPs: 46)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 329 - 462
Target Start/End: Complemental strand, 29224512 - 29224373
Alignment:
Q  329 gaaggtcacccatcccaaaattgctccaagtcaagca--------tgttaagttcttatgatttcggctaccacaaagaatatgcatcttgtttgtatag 420  Q
    |||||||||||||||||||||||||||||||||||||        ||| ||||||||||| ||| |||||||  |||||| |||||||||||| ||||||    
T  29224512 gaaggtcacccatcccaaaattgctccaagtcaagcacgcttaattgtgaagttcttatggtttgggctaccgaaaagaagatgcatcttgttagtatag 29224413  T
Q  421 ttagtatcaaacaattgttataagcctcttctttcaaccatg 462  Q
     ||||| ||||||||| |||||||  ||||| ||||||||||    
T  29224412 gtagtaccaaacaattcttataag--tcttccttcaaccatg 29224373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 289 - 367
Target Start/End: Complemental strand, 3900028 - 3899950
Alignment:
Q  289 tgttttgtcctcactcacacgcttttcgtgaaactttcctgaaggtcacccatcccaaaattgctccaagtcaagcatg 367  Q
    ||||||||||  |||||||||||||| | |||||||||| ||||||||||||| |||||||||||||||||||||||||    
T  3900028 tgttttgtccatactcacacgctttttgggaaactttccagaaggtcacccataccaaaattgctccaagtcaagcatg 3899950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 289 - 478
Target Start/End: Original strand, 11179952 - 11180147
Alignment:
Q  289 tgttttgtcctcactcacacgcttttcgtgaaactttcctgaaggtcacccatcccaaaattgctccaagtcaagca--------tgttaagttcttatg 380  Q
    |||||||||||||||||||| |||  || ||||| | || | |||||||||||||||||||||||||||||||||||        |||  ||||||||||    
T  11179952 tgttttgtcctcactcacacacttaccgggaaacatcccggtaggtcacccatcccaaaattgctccaagtcaagcacgcttaactgtggagttcttatg 11180051  T
Q  381 atttcggctaccacaaagaatatgcatcttgtttgtatagttagtatcaaacaattgttataagcctcttctttcaaccatgatgtcccatacctaca 478  Q
    |  |  ||||||  |||||| ||||||||||||  ||||| ||||| | ||||||| ||||||||  |||| ||||||||||  ||||||||||||||    
T  11180052 aaatgagctaccgaaaagaagatgcatcttgttgatataggtagtacccaacaattcttataagc--cttccttcaaccatgtagtcccatacctaca 11180147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 289 - 478
Target Start/End: Original strand, 32227139 - 32227334
Alignment:
Q  289 tgttttgtcctcactcacacgcttttcgtgaaactttcctgaaggtcacccatcccaaaattgctccaagtcaagca--------tgttaagttcttatg 380  Q
    |||||| ||||||||| ||| |||  || ||||||| || | |||||||||||||||||||||||||||||||||||        |||  ||||||||||    
T  32227139 tgttttttcctcactcgcacacttaccgggaaacttcccggtaggtcacccatcccaaaattgctccaagtcaagcacgcttaactgtggagttcttatg 32227238  T
Q  381 atttcggctaccacaaagaatatgcatcttgtttgtatagttagtatcaaacaattgttataagcctcttctttcaaccatgatgtcccatacctaca 478  Q
    |  |  ||||||| |||||| ||||||||||||  ||||| ||||| | ||||||| ||||||||  |||| ||||||||||  ||||||||||||||    
T  32227239 aaatgagctaccaaaaagaagatgcatcttgttaatataggtagtacccaacaattcttataagc--cttccttcaaccatgtagtcccatacctaca 32227334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 289 - 478
Target Start/End: Complemental strand, 32227728 - 32227533
Alignment:
Q  289 tgttttgtcctcactcacacgcttttcgtgaaactttcctgaaggtcacccatcccaaaattgctccaagtcaagca--------tgttaagttcttatg 380  Q
    |||||| ||||||||| ||| ||| ||| ||||||| || | |||||||||||||||||||||||||||||||||||        |||  ||||||||||    
T  32227728 tgttttttcctcactcgcacacttatcgggaaacttcccggtaggtcacccatcccaaaattgctccaagtcaagcacgcttaactgtggagttcttatg 32227629  T
Q  381 atttcggctaccacaaagaatatgcatcttgtttgtatagttagtatcaaacaattgttataagcctcttctttcaaccatgatgtcccatacctaca 478  Q
    |  |  ||||||  |||||| ||||||||||||  ||||| ||||| | ||||||| ||||||||  |||| ||||||||||  ||||||||||||||    
T  32227628 aaatgagctaccgaaaagaagatgcatcttgttaatataggtagtacccaacaattcttataagc--cttccttcaaccatgtagtcccatacctaca 32227533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 289 - 365
Target Start/End: Complemental strand, 8067508 - 8067432
Alignment:
Q  289 tgttttgtcctcactcacacgcttttcgtgaaactttcctgaaggtcacccatcccaaaattgctccaagtcaagca 365  Q
    |||||||||||||||| ||||||| ||| ||||||| || | |||||||||||||||||||||||||||||||||||    
T  8067508 tgttttgtcctcactcgcacgcttatcgggaaacttcccggtaggtcacccatcccaaaattgctccaagtcaagca 8067432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 289 - 480
Target Start/End: Original strand, 31284194 - 31284391
Alignment:
Q  289 tgttttgtcctcactcacacgcttttcgtgaaactttcctgaaggtcacccatcccaaaattgctccaagtcaagca--------tgttaagttcttatg 380  Q
    |||||||||| ||||| ||||||| |||  |||||| || | |||||||||||||||||||||||||||||||||||        |||  ||||||||||    
T  31284194 tgttttgtccccactcgcacgcttgtcggaaaacttcccggcaggtcacccatcccaaaattgctccaagtcaagcacgcttaactgtggagttcttatg 31284293  T
Q  381 atttcggctaccacaaagaatatgcatcttgtttgtatagttagtatcaaacaattgttataagcctcttctttcaaccatgatgtcccatacctacacg 480  Q
       |  ||||||  |||||| ||||||||||||  ||||| ||||| ||||||||| ||||||||  |||| ||||||||||  ||||||||||| ||||    
T  31284294 gaatgagctaccgaaaagaagatgcatcttgttgatataggtagtaccaaacaattcttataagc--cttccttcaaccatgcagtcccatacctgcacg 31284391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 290 - 365
Target Start/End: Complemental strand, 16811608 - 16811533
Alignment:
Q  290 gttttgtcctcactcacacgcttttcgtgaaactttcctgaaggtcacccatcccaaaattgctccaagtcaagca 365  Q
    ||||||||||||||| || |||| ||| ||||||| || | |||||||||||||||||||||||||||||||||||    
T  16811608 gttttgtcctcactcgcatgcttatcgggaaacttcccggtaggtcacccatcccaaaattgctccaagtcaagca 16811533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 289 - 480
Target Start/End: Complemental strand, 28561973 - 28561777
Alignment:
Q  289 tgttttgtcctcactcacacgcttttcgtgaaactttcctgaaggtcacccatcccaaaattgctccaagtcaagca--------tgttaagttcttatg 380  Q
    |||||||||||||||| |||||||  || ||||||| || | |||||||| ||||||||||||||||||||||||||        |||  ||||||||||    
T  28561973 tgttttgtcctcactcgcacgcttaccgggaaacttccccgtaggtcacc-atcccaaaattgctccaagtcaagcacgcttaactgtggagttcttatg 28561875  T
Q  381 atttcggctaccacaaagaatatgcatcttgtttgtatagttagtatcaaacaattgttataagcctcttctttcaaccatgatgtcccatacctacacg 480  Q
       |  ||||||  |||||| ||||||||||||  ||||| ||||| ||||||||| ||||||||  |||| ||||||||||  ||||||||||| ||||    
T  28561874 gaatgagctaccgaaaagaagatgcatcttgttgatataggtagtaccaaacaattcttataagc--cttccttcaaccatgcagtcccatacctgcacg 28561777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 291 - 365
Target Start/End: Original strand, 27187250 - 27187324
Alignment:
Q  291 ttttgtcctcactcacacgcttttcgtgaaactttcctgaaggtcacccatcccaaaattgctccaagtcaagca 365  Q
    |||||||||||||| ||||||| ||| ||||||| || | |||||||||||||||||||||||| ||||||||||    
T  27187250 ttttgtcctcactcgcacgcttatcgggaaacttcccggtaggtcacccatcccaaaattgctcaaagtcaagca 27187324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 289 - 447
Target Start/End: Complemental strand, 50347974 - 50347808
Alignment:
Q  289 tgttttgtcctcactcacacgcttttcgtgaaactttcctgaaggtcacccatcccaaaattgctccaagtcaagca--------tgttaagttcttatg 380  Q
    |||||||||||||||| ||| ||| ||| |||||||  | | |||||||||||||||||||||||||||||||||||        |||  ||||||||||    
T  50347974 tgttttgtcctcactcgcacacttatcgggaaacttctcggtaggtcacccatcccaaaattgctccaagtcaagcacgcttaactgtggagttcttatg 50347875  T
Q  381 atttcggctaccacaaagaatatgcatcttgtttgtatagttagtatcaaacaattgttataagcct 447  Q
       |  ||||||| |||||| ||||||||||||  ||||| ||||| | ||||||| ||||||||||    
T  50347874 gaatgagctaccaaaaagaagatgcatcttgttgatataggtagtacccaacaattcttataagcct 50347808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 289 - 365
Target Start/End: Original strand, 13150472 - 13150548
Alignment:
Q  289 tgttttgtcctcactcacacgcttttcgtgaaactttcctgaaggtcacccatcccaaaattgctccaagtcaagca 365  Q
    |||||||||||||||| ||| |||  || ||||||| || | |||||||||||||||||||||||||||||||||||    
T  13150472 tgttttgtcctcactcgcacacttaccgggaaacttcccggtaggtcacccatcccaaaattgctccaagtcaagca 13150548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 289 - 365
Target Start/End: Complemental strand, 39653392 - 39653316
Alignment:
Q  289 tgttttgtcctcactcacacgcttttcgtgaaactttcctgaaggtcacccatcccaaaattgctccaagtcaagca 365  Q
    |||||||||||||||| ||| |||  || ||||||| || | |||||||||||||||||||||||||||||||||||    
T  39653392 tgttttgtcctcactcgcacacttaccgggaaacttcccggtaggtcacccatcccaaaattgctccaagtcaagca 39653316  T

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Target: chr3; HSP #14
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 287 - 365
Target Start/End: Original strand, 53150728 - 53150806
Alignment:
Q  287 catgttttgtcctcactcacacgcttttcgtgaaactttcctgaaggtcacccatcccaaaattgctccaagtcaagca 365  Q
    |||||||||||||||||| | ||||||| | |||||||  |  |||||||||||||||||||||||||||||| |||||    
T  53150728 catgttttgtcctcactcgcccgctttttgggaaacttctcataaggtcacccatcccaaaattgctccaagttaagca 53150806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 289 - 365
Target Start/End: Original strand, 32386652 - 32386728
Alignment:
Q  289 tgttttgtcctcactcacacgcttttcgtgaaactttcctgaaggtcacccatcccaaaattgctccaagtcaagca 365  Q
    ||||||||||||||||  ||||||  |  |||||||||| |  ||||||||||||||||||||||||||||||||||    
T  32386652 tgttttgtcctcactcggacgcttaccaagaaactttccggtgggtcacccatcccaaaattgctccaagtcaagca 32386728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 387 - 480
Target Start/End: Complemental strand, 2911217 - 2911126
Alignment:
Q  387 gctaccacaaagaatatgcatcttgtttgtatagttagtatcaaacaattgttataagcctcttctttcaaccatgatgtcccatacctacacg 480  Q
    ||||||| |||||||||||||||||||  ||||| || |||||||||||| ||||||  |  ||||||||||||||  ||||||||||| ||||    
T  2911217 gctaccaaaaagaatatgcatcttgttgatataggtaatatcaaacaatttttataa--ccattctttcaaccatgtggtcccatacctgcacg 2911126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 291 - 365
Target Start/End: Complemental strand, 16811151 - 16811077
Alignment:
Q  291 ttttgtcctcactcacacgcttttcgtgaaactttcctgaaggtcacccatcccaaaattgctccaagtcaagca 365  Q
    |||||||||||||| |||||||   | ||||||| || | ||||||||||||||||||||||| |||||||||||    
T  16811151 ttttgtcctcactcgcacgcttacggggaaacttcccggtaggtcacccatcccaaaattgctacaagtcaagca 16811077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 395 - 480
Target Start/End: Original strand, 20885149 - 20885232
Alignment:
Q  395 aaagaatatgcatcttgtttgtatagttagtatcaaacaattgttataagcctcttctttcaaccatgatgtcccatacctacacg 480  Q
    |||||| ||||||||||||  ||||| ||||||||||||||| |||||||  ||||| ||||||||||  ||| ||||||||||||    
T  20885149 aaagaagatgcatcttgttgatataggtagtatcaaacaattcttataag--tcttccttcaaccatgtagtcacatacctacacg 20885232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 292 - 365
Target Start/End: Complemental strand, 15377509 - 15377436
Alignment:
Q  292 tttgtcctcactcacacgcttttcgtgaaactttcctgaaggtcacccatcccaaaattgctccaagtcaagca 365  Q
    ||||||||||||  ||| ||||| |  |||||| || ||||||||||||||||||||||| |||||||||||||    
T  15377509 tttgtcctcacttgcacacttttaggaaaacttcccagaaggtcacccatcccaaaattgatccaagtcaagca 15377436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 292 - 365
Target Start/End: Complemental strand, 15405771 - 15405698
Alignment:
Q  292 tttgtcctcactcacacgcttttcgtgaaactttcctgaaggtcacccatcccaaaattgctccaagtcaagca 365  Q
    ||||||||||||  ||| ||||| |  |||||| || ||||||||||||||||||||||| |||||||||||||    
T  15405771 tttgtcctcacttgcacacttttaggaaaacttcccagaaggtcacccatcccaaaattgatccaagtcaagca 15405698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 292 - 365
Target Start/End: Complemental strand, 15417596 - 15417523
Alignment:
Q  292 tttgtcctcactcacacgcttttcgtgaaactttcctgaaggtcacccatcccaaaattgctccaagtcaagca 365  Q
    ||||||||||||  ||| ||||| |  |||||| || ||||||||||||||||||||||| |||||||||||||    
T  15417596 tttgtcctcacttgcacacttttaggaaaacttcccagaaggtcacccatcccaaaattgatccaagtcaagca 15417523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 289 - 365
Target Start/End: Original strand, 13150017 - 13150093
Alignment:
Q  289 tgttttgtcctcactcacacgcttttcgtgaaactttcctgaaggtcacccatcccaaaattgctccaagtcaagca 365  Q
    |||||||||||||||  ||| |||  || ||||||| || | ||||||||||| |||||||||||||||||||||||    
T  13150017 tgttttgtcctcacttgcacacttaccgagaaacttcccggtaggtcacccattccaaaattgctccaagtcaagca 13150093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 289 - 365
Target Start/End: Complemental strand, 14814177 - 14814101
Alignment:
Q  289 tgttttgtcctcactcacacgcttttcgtgaaactttcctgaaggtcacccatcccaaaattgctccaagtcaagca 365  Q
    ||||||||| |||||| |||||||  || ||||| || | | |||||||||||| ||||||||||||||||||||||    
T  14814177 tgttttgtcttcactcgcacgcttaccgggaaacctttcggtaggtcacccatcacaaaattgctccaagtcaagca 14814101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 289 - 365
Target Start/End: Complemental strand, 14820382 - 14820306
Alignment:
Q  289 tgttttgtcctcactcacacgcttttcgtgaaactttcctgaaggtcacccatcccaaaattgctccaagtcaagca 365  Q
    |||||||||||||||  || ||||  || ||||||||||   ||||||||||||||||||||| |||||||||||||    
T  14820382 tgttttgtcctcacttgcatgcttaccgggaaactttccgataggtcacccatcccaaaattgttccaagtcaagca 14820306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 294 - 365
Target Start/End: Complemental strand, 15388366 - 15388295
Alignment:
Q  294 tgtcctcactcacacgcttttcgtgaaactttcctgaaggtcacccatcccaaaattgctccaagtcaagca 365  Q
    ||||||||||  ||| ||||| |  |||||| || ||||||||||||||||||||||| |||||||||||||    
T  15388366 tgtcctcacttgcacacttttaggaaaacttcccagaaggtcacccatcccaaaattgatccaagtcaagca 15388295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 294 - 365
Target Start/End: Complemental strand, 15392733 - 15392662
Alignment:
Q  294 tgtcctcactcacacgcttttcgtgaaactttcctgaaggtcacccatcccaaaattgctccaagtcaagca 365  Q
    ||||||||||  ||| ||||| |  |||||| || ||||||||||||||||||||||| |||||||||||||    
T  15392733 tgtcctcacttgcacacttttaggaaaacttcccagaaggtcacccatcccaaaattgatccaagtcaagca 15392662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 386 - 480
Target Start/End: Original strand, 25230271 - 25230363
Alignment:
Q  386 ggctaccacaaagaatatgcatcttgtttgtatagttagtatcaaacaattgttataagcctcttctttcaaccatgatgtcccatacctacacg 480  Q
    |||||||| |||||| ||| ||||||||  ||||| ||||| |||| |||| ||||||||||  || ||||||||||  ||||||||||||||||    
T  25230271 ggctaccaaaaagaagatgtatcttgttgatataggtagtaccaaataattcttataagcct--tccttcaaccatgtagtcccatacctacacg 25230363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 386 - 480
Target Start/End: Original strand, 25237858 - 25237950
Alignment:
Q  386 ggctaccacaaagaatatgcatcttgtttgtatagttagtatcaaacaattgttataagcctcttctttcaaccatgatgtcccatacctacacg 480  Q
    |||||||| |||||| ||| ||||||||  ||||| ||||| |||| |||| ||||||||||  || ||||||||||  ||||||||||||||||    
T  25237858 ggctaccaaaaagaagatgtatcttgttgatataggtagtaccaaataattcttataagcct--tccttcaaccatgtagtcccatacctacacg 25237950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 292 - 365
Target Start/End: Complemental strand, 15411180 - 15411107
Alignment:
Q  292 tttgtcctcactcacacgcttttcgtgaaactttcctgaaggtcacccatcccaaaattgctccaagtcaagca 365  Q
    ||||||||||||  ||| ||||| |  |||||| ||  |||||||||||||||||||||| |||||||||||||    
T  15411180 tttgtcctcacttgcacacttttaggaaaacttcccaaaaggtcacccatcccaaaattgatccaagtcaagca 15411107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 386 - 478
Target Start/End: Original strand, 25230728 - 25230818
Alignment:
Q  386 ggctaccacaaagaatatgcatcttgtttgtatagttagtatcaaacaattgttataagcctcttctttcaaccatgatgtcccatacctaca 478  Q
    |||||||| |||||| ||||||||||||  ||||| ||||| ||||||||| |||||| |  |||| ||||||||||  ||| ||||||||||    
T  25230728 ggctaccaaaaagaaaatgcatcttgttgatataggtagtaccaaacaattcttataaac--cttccttcaaccatgtagtctcatacctaca 25230818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 386 - 478
Target Start/End: Original strand, 25238315 - 25238405
Alignment:
Q  386 ggctaccacaaagaatatgcatcttgtttgtatagttagtatcaaacaattgttataagcctcttctttcaaccatgatgtcccatacctaca 478  Q
    |||||||| |||||| ||||||||||||  ||||| ||||| ||||||||| |||||| |  |||| ||||||||||  ||| ||||||||||    
T  25238315 ggctaccaaaaagaaaatgcatcttgttgatataggtagtaccaaacaattcttataaac--cttccttcaaccatgtagtctcatacctaca 25238405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 387 - 444
Target Start/End: Original strand, 31103984 - 31104041
Alignment:
Q  387 gctaccacaaagaatatgcatcttgtttgtatagttagtatcaaacaattgttataag 444  Q
    ||||||| |||||| |||||||| ||| |||||| ||||||||||||||| |||||||    
T  31103984 gctaccaaaaagaaaatgcatctagttggtatagatagtatcaaacaattcttataag 31104041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 386 - 480
Target Start/End: Original strand, 25239100 - 25239192
Alignment:
Q  386 ggctaccacaaagaatatgcatcttgtttgtatagttagtatcaaacaattgttataagcctcttctttcaaccatgatgtcccatacctacacg 480  Q
    |||||||| |||||| ||||||||||||  ||||| ||||| |||| |||| ||||||||   ||| |||||||||   ||||||||||||||||    
T  25239100 ggctaccaaaaagaagatgcatcttgttgatataggtagtaccaaaaaattcttataagc--gttccttcaaccatatagtcccatacctacacg 25239192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 318 - 365
Target Start/End: Complemental strand, 41472499 - 41472452
Alignment:
Q  318 gaaactttcctgaaggtcacccatcccaaaattgctccaagtcaagca 365  Q
    |||||||||| | ||||||||||||||||||||| | |||||||||||    
T  41472499 gaaactttccggtaggtcacccatcccaaaattgtttcaagtcaagca 41472452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 371 - 480
Target Start/End: Complemental strand, 7494019 - 7493912
Alignment:
Q  371 agttcttatgatttcggctaccacaaagaatatgcatcttgtttgtatagttagtatcaaacaattgttataagcctcttctttcaaccatgatgtccca 470  Q
    |||||||||| ||| |||||||  |||||| ||||||||||||  ||||  ||||| |||| |||| ||||||||  |||| ||||||||||  ||| ||    
T  7494019 agttcttatggtttgggctaccgaaaagaagatgcatcttgttgatataagtagtaccaaaaaattcttataagc--cttccttcaaccatgcagtctca 7493922  T
Q  471 tacctacacg 480  Q
    ||||| ||||    
T  7493921 tacctgcacg 7493912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 371 - 480
Target Start/End: Original strand, 25803012 - 25803119
Alignment:
Q  371 agttcttatgatttcggctaccacaaagaatatgcatcttgtttgtatagttagtatcaaacaattgttataagcctcttctttcaaccatgatgtccca 470  Q
    |||||||||||  | || ||||  |||||| || |||||||||| ||||| ||||| ||||||||| ||| |||  ||||  ||||||||||  ||||||    
T  25803012 agttcttatgaaatgggataccgaaaagaagatacatcttgtttttataggtagtaccaaacaattcttacaag--tcttacttcaaccatgcagtccca 25803109  T
Q  471 tacctacacg 480  Q
    ||||||||||    
T  25803110 tacctacacg 25803119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 370 - 479
Target Start/End: Complemental strand, 30529826 - 30529719
Alignment:
Q  370 aagttcttatgatttcggctaccacaaagaatatgcatcttgtttgtatagttagtatcaaacaattgttataagcctcttctttcaaccatgatgtccc 469  Q
    |||||||||||   | |||||||| |||||| ||||||||||||  ||||| ||||| |||| |||| ||||||||  |||  ||||||||||  ||| |    
T  30529826 aagttcttatggaatgggctaccaaaaagaagatgcatcttgttgatataggtagtaccaaaaaattcttataagc--cttacttcaaccatgtagtctc 30529729  T
Q  470 atacctacac 479  Q
    ||||||||||    
T  30529728 atacctacac 30529719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 395 - 480
Target Start/End: Original strand, 32386766 - 32386849
Alignment:
Q  395 aaagaatatgcatcttgtttgtatagttagtatcaaacaattgttataagcctcttctttcaaccatgatgtcccatacctacacg 480  Q
    |||||| ||||||||||||  ||||| ||||| ||||||||| ||||||||  |||| |||||||||   ||||||||||| ||||    
T  32386766 aaagaagatgcatcttgttaatataggtagtaccaaacaattcttataagc--cttccttcaaccatacagtcccatacctgcacg 32386849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 387 - 480
Target Start/End: Complemental strand, 39641059 - 39640968
Alignment:
Q  387 gctaccacaaagaatatgcatcttgtttgtatagttagtatcaaacaattgttataagcctcttctttcaaccatgatgtcccatacctacacg 480  Q
    ||||||| |||||| ||||||||| ||  ||||| ||||| ||||||| | |||||||  ||||| ||||||||||  ||| ||||||||||||    
T  39641059 gctaccaaaaagaagatgcatcttattgatataggtagtaccaaacaactcttataag--tcttccttcaaccatgtagtctcatacctacacg 39640968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 395 - 480
Target Start/End: Complemental strand, 39653278 - 39653195
Alignment:
Q  395 aaagaatatgcatcttgtttgtatagttagtatcaaacaattgttataagcctcttctttcaaccatgatgtcccatacctacacg 480  Q
    |||||| ||||||||||||  ||||| ||||||| ||||||| ||||||||   ||| ||||||||||  ||||||||||| ||||    
T  39653278 aaagaagatgcatcttgttgatataggtagtatccaacaattcttataagc--tttccttcaaccatgcagtcccatacctgcacg 39653195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 387 - 444
Target Start/End: Original strand, 4067384 - 4067441
Alignment:
Q  387 gctaccacaaagaatatgcatcttgtttgtatagttagtatcaaacaattgttataag 444  Q
    ||||||| |||||| ||||||||||||  ||||| ||||| ||||||||| |||||||    
T  4067384 gctaccaaaaagaagatgcatcttgttgatataggtagtaccaaacaatttttataag 4067441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 386 - 462
Target Start/End: Original strand, 25238707 - 25238781
Alignment:
Q  386 ggctaccacaaagaatatgcatcttgtttgtatagttagtatcaaacaattgttataagcctcttctttcaaccatg 462  Q
    |||||||| |||||| ||||||||||||  || || ||||| ||||||||| |||||||  ||||| ||||||||||    
T  25238707 ggctaccaaaaagaagatgcatcttgttgataaagatagtaccaaacaattcttataag--tcttccttcaaccatg 25238781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 386 - 443
Target Start/End: Complemental strand, 25248234 - 25248177
Alignment:
Q  386 ggctaccacaaagaatatgcatcttgtttgtatagttagtatcaaacaattgttataa 443  Q
    |||||||| |||||| ||||||||||||  ||||| ||||| ||||||||| ||||||    
T  25248234 ggctaccaaaaagaagatgcatcttgttgatataggtagtaccaaacaattcttataa 25248177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 395 - 478
Target Start/End: Original strand, 13150131 - 13150212
Alignment:
Q  395 aaagaatatgcatcttgtttgtatagttagtatcaaacaattgttataagcctcttctttcaaccatgatgtcccatacctaca 478  Q
    |||||| ||||||||||||  || || ||||| | ||||||| ||||||||  |||| ||||||||||  ||||||||||||||    
T  13150131 aaagaagatgcatcttgttgatacaggtagtacccaacaattcttataagc--cttccttcaaccatgtagtcccatacctaca 13150212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 289 - 365
Target Start/End: Complemental strand, 25248339 - 25248263
Alignment:
Q  289 tgttttgtcctcactcacacgcttttcgtgaaactttcctgaaggtcacccatcccaaaattgctccaagtcaagca 365  Q
    |||||||||||||||| |||||||  |||||||||| || | |||||| |||||  || | | ||||||||||||||    
T  25248339 tgttttgtcctcactcgcacgcttaccgtgaaacttcccggtaggtcatccatcataagactactccaagtcaagca 25248263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 333 - 365
Target Start/End: Complemental strand, 41474181 - 41474149
Alignment:
Q  333 gtcacccatcccaaaattgctccaagtcaagca 365  Q
    ||||||||||||||||||| |||||||||||||    
T  41474181 gtcacccatcccaaaattgttccaagtcaagca 41474149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 56; Significance: 6e-23; HSPs: 31)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 291 - 447
Target Start/End: Original strand, 30963183 - 30963347
Alignment:
Q  291 ttttgtcctcactcacacgcttttcgtgaaactttcctgaaggtcacccatcccaaaattgctccaagtcaagca--------tgttaagttcttatgat 382  Q
    |||| ||||||||| |||||||| || ||||||| |  ||||||||| |||||||||||||||||||||||||||        |||| | ||||||||||    
T  30963183 ttttatcctcactcgcacgctttccgagaaacttccaagaaggtcactcatcccaaaattgctccaagtcaagcacgcttaactgttgaattcttatgat 30963282  T
Q  383 ttcggctaccacaaagaatatgcatcttgtttgtatagttagtatcaaacaattgttataagcct 447  Q
    || |||||||| ||| || ||||||||||||  ||||| ||||| | ||||||| ||||||||||    
T  30963283 ttgggctaccaaaaataagatgcatcttgttgatataggtagtacctaacaattcttataagcct 30963347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 289 - 447
Target Start/End: Complemental strand, 33771229 - 33771063
Alignment:
Q  289 tgttttgtcctcactcacacgcttttcgtgaaactttcctgaaggtcacccatcccaaaattgctccaagtcaagcatg-tta-------agttcttatg 380  Q
    |||||||||||||||| || ||||  || ||||||| || | ||||||||||||||||||||||||||||||||||||| |||       ||||||||||    
T  33771229 tgttttgtcctcactcgcatgcttaccgggaaacttcccggtaggtcacccatcccaaaattgctccaagtcaagcatgcttaactgtggagttcttatg 33771130  T
Q  381 atttcggctaccacaaagaatatgcatcttgtttgtatagttagtatcaaacaattgttataagcct 447  Q
    |  |  ||||||  |||||| ||||||||||||  ||||| ||||| ||||||||| ||||||||||    
T  33771129 aaatgagctaccgaaaagaagatgcatcttgttgatataggtagtaccaaacaattcttataagcct 33771063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 291 - 478
Target Start/End: Complemental strand, 8256752 - 8256559
Alignment:
Q  291 ttttgtcctcactcacacgcttttcgtgaaactttcctgaaggtcacccatcccaaaattgctccaagtcaagca--------tgttaagttcttatgat 382  Q
    |||||||||||||| ||||||| |||  |||||| || | |||||||||||||||||||||||||||||||||||        |||  ||||||||||      
T  8256752 ttttgtcctcactcgcacgcttatcggaaaacttcccagcaggtcacccatcccaaaattgctccaagtcaagcacgcttaactgtggagttcttatgga 8256653  T
Q  383 ttcggctaccacaaagaatatgcatcttgtttgtatagttagtatcaaacaattgttataagcctcttctttcaaccatgatgtcccatacctaca 478  Q
     |  ||||||  |||||| ||||||||||||  ||||| ||||| | ||||||| ||||||||  |||| ||||||||||  ||||||||||||||    
T  8256652 atgagctaccgaaaagaagatgcatcttgttgatataggtagtacccaacaattcttataagc--cttccttcaaccatgtagtcccatacctaca 8256559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 289 - 444
Target Start/End: Original strand, 30961801 - 30961964
Alignment:
Q  289 tgttttgtcctcactcacacgcttttcgtgaaactttcctgaaggtcacccatcccaaaattgctccaagtcaagca--------tgttaagttcttatg 380  Q
    |||||||||||||||| ||||||||  | ||||||  || |||||||||||||||||||||||||| ||||||||||        |||  ||||||||||    
T  30961801 tgttttgtcctcactcgcacgctttctgagaaactacccagaaggtcacccatcccaaaattgctctaagtcaagcacgtttaactgtggagttcttatg 30961900  T
Q  381 atttcggctaccacaaagaatatgcatcttgtttgtatagttagtatcaaacaattgttataag 444  Q
     |||||||||||  ||| |||||||||||||||  ||||| ||||| ||| ||| | |||||||    
T  30961901 gtttcggctaccgaaaaaaatatgcatcttgttgatataggtagtaccaatcaaatcttataag 30961964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 289 - 480
Target Start/End: Original strand, 25337915 - 25338112
Alignment:
Q  289 tgttttgtcctcactcacacgcttttcgtgaaactttcctgaaggtcacccatcccaaaattgctccaagtcaagca--------tgttaagttcttatg 380  Q
    |||||||||||||||| ||| |||  || ||||||| || | |||||||||||||||||||||||||||||||||||        |||  ||||||||||    
T  25337915 tgttttgtcctcactcgcacacttaccgggaaacttcccggtaggtcacccatcccaaaattgctccaagtcaagcacgcttaactgtggagttcttatg 25338014  T
Q  381 atttcggctaccacaaagaatatgcatcttgtttgtatagttagtatcaaacaattgttataagcctcttctttcaaccatgatgtcccatacctacacg 480  Q
    |  |  |||| |  |||||| ||||||||||||  ||||| ||||| | ||||||| ||||||||  |||| ||||||||||  ||||||||||| ||||    
T  25338015 aaatgagctatcgaaaagaagatgcatcttgttgatataggtagtacccaacaattcttataagc--cttccttcaaccatgcagtcccatacctgcacg 25338112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 289 - 480
Target Start/End: Complemental strand, 41754517 - 41754320
Alignment:
Q  289 tgttttgtcctcactcacacgcttttcgtgaaactttcctgaaggtcacccatcccaaaattgctccaagtcaagca--------tgttaagttcttatg 380  Q
    |||||||||||||||| |||| ||  || |||||||||| | |||||| ||||||||||||||||||||||||||||        |||  ||||||||||    
T  41754517 tgttttgtcctcactcgcacgtttaccgggaaactttccggtaggtcatccatcccaaaattgctccaagtcaagcacgcttaactgtggagttcttatg 41754418  T
Q  381 atttcggctaccacaaagaatatgcatcttgtttgtatagttagtatcaaacaattgttataagcctcttctttcaaccatgatgtcccatacctacacg 480  Q
       |  ||||||  |||||| ||||||||||||  ||||| ||||| ||||||||| ||||||||  |||| ||||||||||  ||| ||||||| ||||    
T  41754417 gaatgagctaccgaaaagaagatgcatcttgttgatatagatagtaccaaacaattcttataagc--cttccttcaaccatgcagtctcatacctgcacg 41754320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 289 - 367
Target Start/End: Original strand, 32377634 - 32377712
Alignment:
Q  289 tgttttgtcctcactcacacgcttttcgtgaaactttcctgaaggtcacccatcccaaaattgctccaagtcaagcatg 367  Q
    |||||||||||||||| |||||||  ||  ||||||||| | |||||||| ||||||||||||||||||||||||||||    
T  32377634 tgttttgtcctcactcgcacgcttaccggaaaactttccggtaggtcacctatcccaaaattgctccaagtcaagcatg 32377712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 289 - 365
Target Start/End: Complemental strand, 30966918 - 30966842
Alignment:
Q  289 tgttttgtcctcactcacacgcttttcgtgaaactttcctgaaggtcacccatcccaaaattgctccaagtcaagca 365  Q
    |||||||||||||||| |||||||  || ||||||| || | ||||||||||||||||||||||||||||| |||||    
T  30966918 tgttttgtcctcactcgcacgcttaccgagaaacttcccggtaggtcacccatcccaaaattgctccaagttaagca 30966842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 289 - 534
Target Start/End: Complemental strand, 8074120 - 8073873
Alignment:
Q  289 tgttttgtcctcactcacacgcttttcgtgaaactttcctgaaggtcacccatcccaaaattgctccaagtcaagcatg-tta-------agttcttatg 380  Q
    |||||||| |||| |||||| ||||||| |||||||||  ||||||||| ||||||||||||   |||||||||| | | |||       ||||||||||    
T  8074120 tgttttgttctcaatcacacacttttcgagaaactttctggaaggtcactcatcccaaaatttaaccaagtcaagaaggcttatctatggagttcttatg 8074021  T
Q  381 atttcggctaccacaaagaatatgcatcttgtttgtatagttagtatcaaacaattgttataagcctcttctttcaaccatgatgtcccatacctacacg 480  Q
    |  | |||||| | |||||| |||||||||||| |||||| ||||| ||||||||| |||||||  ||| | ||||||| |   | |||||||||    |    
T  8074020 aaatgggctacaagaaagaagatgcatcttgttggtataggtagtaccaaacaattcttataag--tctcccttcaaccttatagacccatacct----g 8073927  T
Q  481 tacaatatcaggatccctctcattcttatgtgaattcagtttgcctagaagctg 534  Q
     ||||| ||| ||||||||||||||| ||| | ||||| |||||||| ||||||    
T  8073926 cacaatctcatgatccctctcattctaatgaggattcaatttgcctaaaagctg 8073873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 371 - 480
Target Start/End: Complemental strand, 33175096 - 33174989
Alignment:
Q  371 agttcttatgatttcggctaccacaaagaatatgcatcttgtttgtatagttagtatcaaacaattgttataagcctcttctttcaaccatgatgtccca 470  Q
    |||||||||||  |  ||||||| |||||| ||||||||||||  ||||| ||||| ||||||||| ||||||||  |||| ||||||||||  ||||||    
T  33175096 agttcttatgaaatgagctaccaaaaagaagatgcatcttgttgatataggtagtaccaaacaattcttataagc--cttccttcaaccatgtagtccca 33174999  T
Q  471 tacctacacg 480  Q
    ||||||||||    
T  33174998 tacctacacg 33174989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 289 - 374
Target Start/End: Original strand, 18875903 - 18875988
Alignment:
Q  289 tgttttgtcctcactcacacgcttttcgtgaaactttcctgaaggtcacccatcccaaaattgctccaagtcaagcatgttaagtt 374  Q
    |||||||||||||||| |||| |||||  |||||||| | |||| ||||||||||||||||||||| || ||||||| | ||||||    
T  18875903 tgttttgtcctcactcgcacgattttcaagaaacttttcagaagatcacccatcccaaaattgctcaaaatcaagcacgctaagtt 18875988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 289 - 475
Target Start/End: Complemental strand, 30966462 - 30966270
Alignment:
Q  289 tgttttgtcctcactcacacgcttttcgtgaaactttcctgaaggtcacccatcccaaaattgctccaagtcaagcatg-tta-------agttcttatg 380  Q
    |||||||||||||||| || ||||  || ||||||| || | ||||||||||||||||||||| ||||||||||||| | |||       ||||||||||    
T  30966462 tgttttgtcctcactcgcatgcttaccgagaaacttcccggtaggtcacccatcccaaaattggtccaagtcaagcacgcttaactatggagttcttatg 30966363  T
Q  381 atttcggctaccacaaagaatatgcatcttgtttgtatagttagtatcaaacaattgttataagcctcttctttcaaccatgatgtcccatacct 475  Q
       |  | ||||  |||||| ||||||||||||  ||||| ||||| ||||||||| ||||||||  |||| ||||||||||  |||||||||||    
T  30966362 gaatgagataccgaaaagaagatgcatcttgttgatataggtagtaccaaacaattcttataagc--cttccttcaaccatgcagtcccatacct 30966270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 289 - 365
Target Start/End: Complemental strand, 13191202 - 13191126
Alignment:
Q  289 tgttttgtcctcactcacacgcttttcgtgaaactttcctgaaggtcacccatcccaaaattgctccaagtcaagca 365  Q
    |||||||||| || |||||||||||| | |||||||||| |||||||||| ||| ||||||| || |||||||||||    
T  13191202 tgttttgtccgcattcacacgctttttgagaaactttccagaaggtcacctatctcaaaatttcttcaagtcaagca 13191126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 289 - 365
Target Start/End: Original strand, 29259538 - 29259614
Alignment:
Q  289 tgttttgtcctcactcacacgcttttcgtgaaactttcctgaaggtcacccatcccaaaattgctccaagtcaagca 365  Q
    |||||||||||||||| || ||||  || ||||||| || | |||||||||||||||||||||||| ||||||||||    
T  29259538 tgttttgtcctcactcgcatgcttaccgggaaacttcccggtaggtcacccatcccaaaattgctcaaagtcaagca 29259614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 289 - 480
Target Start/End: Complemental strand, 16379621 - 16379424
Alignment:
Q  289 tgttttgtcctcactcacacgcttttcgtgaaactttcctgaaggtcacccatcccaaaattgctccaagtcaagca--------tgttaagttcttatg 380  Q
    |||||||||||||||| |||||||   ||||||||| || | ||||||||||||| || ||| ||||||||||| ||        |||  ||||||||||    
T  16379621 tgttttgtcctcactcgcacgcttacagtgaaacttcccggtaggtcacccatccaaagattactccaagtcaaacacgcttaactgtggagttcttatg 16379522  T
Q  381 atttcggctaccacaaagaatatgcatcttgtttgtatagttagtatcaaacaattgttataagcctcttctttcaaccatgatgtcccatacctacacg 480  Q
       |  ||||||| |||||| ||||||||||||  ||||| ||||| |||||||||  ||||||  ||||| ||||||||||  ||||||||||| ||||    
T  16379521 gaatgtgctaccaaaaagaagatgcatcttgttgatataggtagtaccaaacaattcgtataag--tcttccttcaaccatgcagtcccatacctgcacg 16379424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 371 - 479
Target Start/End: Complemental strand, 1707179 - 1707073
Alignment:
Q  371 agttcttatgatttcggctaccacaaagaatatgcatcttgtttgtatagttagtatcaaacaattgttataagcctcttctttcaaccatgatgtccca 470  Q
    |||||||||||  | |||||||| |||||| ||||||||||||  ||||| ||||| ||||||||| |||||||  ||||| ||||| ||||  ||| ||    
T  1707179 agttcttatgagatgggctaccaaaaagaagatgcatcttgttgatataggtagtaccaaacaattcttataag--tcttccttcaatcatgtagtctca 1707082  T
Q  471 tacctacac 479  Q
    |||||||||    
T  1707081 tacctacac 1707073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 289 - 362
Target Start/End: Original strand, 32377825 - 32377898
Alignment:
Q  289 tgttttgtcctcactcacacgcttttcgtgaaactttcctgaaggtcacccatcccaaaattgctccaagtcaa 362  Q
    |||||||||||||||| |||||||  ||  |||||| || | || |||||||||||||||||||||||||||||    
T  32377825 tgttttgtcctcactcgcacgcttaccggaaaacttcccagtagatcacccatcccaaaattgctccaagtcaa 32377898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 289 - 365
Target Start/End: Complemental strand, 15639962 - 15639886
Alignment:
Q  289 tgttttgtcctcactcacacgcttttcgtgaaactttcctgaaggtcacccatcccaaaattgctccaagtcaagca 365  Q
    |||||||||||||||| ||||||| ||| ||||||| || | ||||||||||||| || | | ||||||||||||||    
T  15639962 tgttttgtcctcactcgcacgcttatcgagaaacttcccagtaggtcacccatccaaagactactccaagtcaagca 15639886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 289 - 365
Target Start/End: Complemental strand, 24818553 - 24818478
Alignment:
Q  289 tgttttgtcctcactcacacgcttttcgtgaaactttcctgaaggtcacccatcccaaaattgctccaagtcaagca 365  Q
    |||||||||||||||| |||||||  |  ||||||| || | ||||||||||||| |||||||||||||||||||||    
T  24818553 tgttttgtcctcactcgcacgcttaccaggaaacttcccggtaggtcacccatcc-aaaattgctccaagtcaagca 24818478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 289 - 448
Target Start/End: Original strand, 5399735 - 5399902
Alignment:
Q  289 tgttttgtcctcactcacacgcttttcgtgaaactttcctgaaggtcacccatcccaaaattgctccaagtcaagca--------tgttaagttcttatg 380  Q
    |||||||| ||||||| |||||||  ||  |||||| |  | |||||||||||||||||||| ||||||||||||||        | | |||||||||||    
T  5399735 tgttttgttctcactcgcacgcttaccggaaaacttcctggtaggtcacccatcccaaaatttctccaagtcaagcacgcttaactatgaagttcttatg 5399834  T
Q  381 atttcggctaccacaaagaatatgcatcttgtttgtatagttagtatcaaacaattgttataagcctc 448  Q
       |  ||||||  |||||| ||||||||||||  ||||| ||||| ||||||||| |||||||||||    
T  5399835 gaatgagctaccgaaaagaagatgcatcttgttgatataggtagtaccaaacaattcttataagcctc 5399902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 331 - 365
Target Start/End: Complemental strand, 11388373 - 11388339
Alignment:
Q  331 aggtcacccatcccaaaattgctccaagtcaagca 365  Q
    |||||||||||||||||||||||||||||||||||    
T  11388373 aggtcacccatcccaaaattgctccaagtcaagca 11388339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 331 - 365
Target Start/End: Complemental strand, 11394719 - 11394685
Alignment:
Q  331 aggtcacccatcccaaaattgctccaagtcaagca 365  Q
    |||||||||||||||||||||||||||||||||||    
T  11394719 aggtcacccatcccaaaattgctccaagtcaagca 11394685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 387 - 480
Target Start/End: Original strand, 18098902 - 18098993
Alignment:
Q  387 gctaccacaaagaatatgcatcttgtttgtatagttagtatcaaacaattgttataagcctcttctttcaaccatgatgtcccatacctacacg 480  Q
    ||||||| |||||| ||||||||||||  ||||| ||||| ||||||||| |||||||| ||  | ||||||||||  ||| ||||||||||||    
T  18098902 gctaccaaaaagaagatgcatcttgttgatataggtagtaccaaacaattcttataagcatc--ccttcaaccatgtagtctcatacctacacg 18098993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 386 - 474
Target Start/End: Original strand, 25434079 - 25434165
Alignment:
Q  386 ggctaccacaaagaatatgcatcttgtttgtatagttagtatcaaacaattgttataagcctcttctttcaaccatgatgtcccatacc 474  Q
    |||||||| |||| | ||||||||||||  || || | ||||||||||||| ||||||||  |||| ||||||||||| ||||||||||    
T  25434079 ggctaccagaaaggagatgcatcttgttgataaaggttgtatcaaacaattcttataagc--cttccttcaaccatgaagtcccatacc 25434165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 289 - 444
Target Start/End: Original strand, 30963638 - 30963801
Alignment:
Q  289 tgttttgtcctcactcacacgcttttcgtgaaactttcctgaaggtcacccatcccaaaattgctccaagtcaagca--------tgttaagttcttatg 380  Q
    |||||||||||||||| |||| ||| ||  |||||| |  |||||||||| ||||||||| | | ||||||||||||        |||  |||| |||||    
T  30963638 tgttttgtcctcactcgcacggtttccgacaaacttcctagaaggtcacctatcccaaaactccgccaagtcaagcacgcttaactgtggagttattatg 30963737  T
Q  381 atttcggctaccacaaagaatatgcatcttgtttgtatagttagtatcaaacaattgttataag 444  Q
     ||| |||||||| |||||| ||||||||||||  ||||| ||| | || |||||| |||||||    
T  30963738 gtttgggctaccagaaagaagatgcatcttgttgatataggtagaaccatacaattcttataag 30963801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 386 - 478
Target Start/End: Complemental strand, 1912647 - 1912558
Alignment:
Q  386 ggctaccacaaagaatatgcatcttgtttgtatagttagtatcaaacaattgttataagcctcttctttcaaccatgatgtcccatacctaca 478  Q
    |||||||| |||||| ||||||||||||  ||||| ||||| ||||||||| ||||||   ||| ||||||||||||  ||| ||||||||||    
T  1912647 ggctacca-aaagaagatgcatcttgttgatataggtagtaccaaacaattcttataa--atctactttcaaccatgtagtctcatacctaca 1912558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 387 - 436
Target Start/End: Complemental strand, 16379059 - 16379010
Alignment:
Q  387 gctaccacaaagaatatgcatcttgtttgtatagttagtatcaaacaatt 436  Q
    ||||||| |||||| ||||||||||||  ||||| |||||||||||||||    
T  16379059 gctaccaaaaagaagatgcatcttgttgatataggtagtatcaaacaatt 16379010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 386 - 447
Target Start/End: Complemental strand, 33174626 - 33174565
Alignment:
Q  386 ggctaccacaaagaatatgcatcttgtttgtatagttagtatcaaacaattgttataagcct 447  Q
    |||||||  |||||| ||||||||||||  ||||| ||||| ||||||||| ||||||||||    
T  33174626 ggctaccgaaaagaagatgcatcttgttgatataggtagtaccaaacaattcttataagcct 33174565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 388 - 444
Target Start/End: Complemental strand, 13191095 - 13191039
Alignment:
Q  388 ctaccacaaagaatatgcatcttgtttgtatagttagtatcaaacaattgttataag 444  Q
    |||||| |||||| |||||||||||| |||||  ||||| ||||||||| |||||||    
T  13191095 ctaccaaaaagaagatgcatcttgttggtatatgtagtaccaaacaattcttataag 13191039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 395 - 478
Target Start/End: Complemental strand, 29804796 - 29804715
Alignment:
Q  395 aaagaatatgcatcttgtttgtatagttagtatcaaacaattgttataagcctcttctttcaaccatgatgtcccatacctaca 478  Q
    |||||| ||||||||||||  ||||| ||||| | ||||||| ||||||||  || | ||||||||||  ||||||||||||||    
T  29804796 aaagaagatgcatcttgttgatataggtagtacccaacaattcttataagc--ctgccttcaaccatgtagtcccatacctaca 29804715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 389 - 445
Target Start/End: Original strand, 38898938 - 38898994
Alignment:
Q  389 taccacaaagaatatgcatcttgtttgtatagttagtatcaaacaattgttataagc 445  Q
    ||||| |||||| ||||||||||||  ||||| ||||| ||||||||| ||||||||    
T  38898938 taccaaaaagaaaatgcatcttgttgatataggtagtaccaaacaattcttataagc 38898994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 55; Significance: 2e-22; HSPs: 41)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 291 - 473
Target Start/End: Original strand, 30684476 - 30684664
Alignment:
Q  291 ttttgtcctcactcacacgcttttcgtgaaactttcctgaaggtcacccatcccaaaattgctccaagtcaagca--------tgttaagttcttatgat 382  Q
    ||||||||| |||| ||||||||||| |||||||| | |||||||||||||||||||||||||||||||  ||||        |||  |||||||||| |    
T  30684476 ttttgtccttactcgcacgcttttcgagaaacttttcagaaggtcacccatcccaaaattgctccaagttgagcacgcttaactgtggagttcttatggt 30684575  T
Q  383 ttcggctaccacaaagaatatgcatcttgtttgtatagttagtatcaaacaattgttataagcctcttctttcaaccatgatgtcccatac 473  Q
    ||   |||||  |||||| ||||||||||||| ||||| ||||| |||||||||  ||||||||||  | |||||| ||||||| ||||||    
T  30684576 ttgacctaccgaaaagaagatgcatcttgtttttatagatagtaccaaacaattcatataagcctc--ccttcaacaatgatgttccatac 30684664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 289 - 473
Target Start/End: Complemental strand, 189296 - 189106
Alignment:
Q  289 tgttttgtcctcactcacacgcttttcgtgaaactttcctgaaggtcacccatcccaaaattgctccaagtcaagcatg-tta-------agttcttatg 380  Q
    |||||||||||||||| |||| ||  || |||||||||| | ||||||||||||||||||||||||||||||||||||| |||       ||||||||||    
T  189296 tgttttgtcctcactcgcacgtttaccgggaaactttccggtaggtcacccatcccaaaattgctccaagtcaagcatgcttaactgtggagttcttatg 189197  T
Q  381 atttcggctaccacaaagaatatgcatcttgtttgtatagttagtatcaaacaattgttataagcctcttctttcaaccatgatgtcccatac 473  Q
       |  ||||||  |||||| || |||||||||  ||||| ||||| ||||||||| ||||||||  |||| ||||||||||  |||||||||    
T  189196 gaatgagctaccgaaaagaagatacatcttgttgatataggtagtaccaaacaattcttataagc--cttccttcaaccatgcagtcccatac 189106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 289 - 447
Target Start/End: Original strand, 24182164 - 24182329
Alignment:
Q  289 tgttttgtcctcactcacacgcttttcgtgaaactttcctgaaggtcacccatcccaaaattgctccaagtcaagca--------tgttaagttcttatg 380  Q
    |||||| ||||||||| ||| |||| || ||||||||   |||||||||||||||||||||||||||||||||| ||        ||||||||| |||||    
T  24182164 tgttttatcctcactcgcacactttccgagaaactttttagaaggtcacccatcccaaaattgctccaagtcaaccacgcttaactgttaagttattatg 24182263  T
Q  381 atttcggctaccacaaagaatatgcatcttgtttgtatagttagtatcaaacaattgttataagcct 447  Q
     ||| || ||||  |||||| |||||||||||| |||||| ||||| |||| |||| ||||||||||    
T  24182264 gtttggggtacc-gaaagaagatgcatcttgttggtatagatagtaccaaataattcttataagcct 24182329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 289 - 365
Target Start/End: Original strand, 8391240 - 8391316
Alignment:
Q  289 tgttttgtcctcactcacacgcttttcgtgaaactttcctgaaggtcacccatcccaaaattgctccaagtcaagca 365  Q
    |||||||||||||||| |||| || ||| ||||||| || | |||||||||||||||||||||||||||||||||||    
T  8391240 tgttttgtcctcactcgcacgtttatcgagaaacttcccggtaggtcacccatcccaaaattgctccaagtcaagca 8391316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 289 - 365
Target Start/End: Original strand, 17445373 - 17445449
Alignment:
Q  289 tgttttgtcctcactcacacgcttttcgtgaaactttcctgaaggtcacccatcccaaaattgctccaagtcaagca 365  Q
    |||||||||||||||| |||||||  || ||||||| || | |||||||||||||||||||||||||||||||||||    
T  17445373 tgttttgtcctcactcgcacgcttaccgggaaacttcccggtaggtcacccatcccaaaattgctccaagtcaagca 17445449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 289 - 365
Target Start/End: Complemental strand, 34371840 - 34371764
Alignment:
Q  289 tgttttgtcctcactcacacgcttttcgtgaaactttcctgaaggtcacccatcccaaaattgctccaagtcaagca 365  Q
    |||||||||||||||| |||||||  || ||||||| || | |||||||||||||||||||||||||||||||||||    
T  34371840 tgttttgtcctcactcgcacgcttaccgggaaacttcccagtaggtcacccatcccaaaattgctccaagtcaagca 34371764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 291 - 365
Target Start/End: Original strand, 21886066 - 21886140
Alignment:
Q  291 ttttgtcctcactcacacgcttttcgtgaaactttcctgaaggtcacccatcccaaaattgctccaagtcaagca 365  Q
    |||||||||||||| |||||||  || ||||||| || | |||||||||||||||||||||||||||||||||||    
T  21886066 ttttgtcctcactcgcacgcttaccgggaaacttcccagtaggtcacccatcccaaaattgctccaagtcaagca 21886140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 289 - 361
Target Start/End: Complemental strand, 22557197 - 22557125
Alignment:
Q  289 tgttttgtcctcactcacacgcttttcgtgaaactttcctgaaggtcacccatcccaaaattgctccaagtca 361  Q
    |||||||||||||||| |||||||  || ||||||| || | |||||||||||||||||||||||||||||||    
T  22557197 tgttttgtcctcactcgcacgcttaccgggaaacttcccggtaggtcacccatcccaaaattgctccaagtca 22557125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 288 - 513
Target Start/End: Original strand, 30719722 - 30719949
Alignment:
Q  288 atgttttgtcctcactcacacgcttttcgtgaaactttcctgaaggtcacccatcccaaaattgctccaagtcaagca--------tgttaagttcttat 379  Q
    ||||||||| ||| ||| ||||||||||  ||||||||   ||| ||||||| |||||||||||||||||||  ||||        |||  |||||||||    
T  30719722 atgttttgttctctctcgcacgcttttcaagaaactttttagaatgtcacccgtcccaaaattgctccaagttgagcacgcttaattgtggagttcttat 30719821  T
Q  380 gatttcggctaccacaaagaatatgcatcttgtttgtatagttagtatcaaacaattgttataagcctcttctttcaaccatgatgtcccatacctacac 479  Q
    | |||   |||||  |||||| ||||||||||||| ||||| ||||| |||||||||  |||||||  |||| |||||| |||||||||||||| |        
T  30719822 ggtttgacctaccgaaaagaagatgcatcttgtttttataggtagtaccaaacaattcatataagc--cttccttcaacaatgatgtcccatactt---- 30719915  T
Q  480 gtacaatatcaggatccctctcattcttatgtga 513  Q
    | ||||  ||||||||||||||||||| ||||||    
T  30719916 gcacaacctcaggatccctctcattctgatgtga 30719949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 289 - 480
Target Start/End: Complemental strand, 1822134 - 1821937
Alignment:
Q  289 tgttttgtcctcactcacacgcttttcgtgaaactttcctgaaggtcacccatcccaaaattgctccaagtcaagca--------tgttaagttcttatg 380  Q
    ||||||||||||| ||||||||||  || ||||||| || | ||||||||||||| || | | ||||||||||||||        |||  ||||||||||    
T  1822134 tgttttgtcctcattcacacgcttaccgggaaacttcccggtaggtcacccatccaaagactactccaagtcaagcacgcttaaatgtggagttcttatg 1822035  T
Q  381 atttcggctaccacaaagaatatgcatcttgtttgtatagttagtatcaaacaattgttataagcctcttctttcaaccatgatgtcccatacctacacg 480  Q
       | |||||||| |||||| ||||||||||||  ||||| ||||| ||||||||| ||||||||  |||| ||||||||||  ||| ||||||| ||||    
T  1822034 gaatgggctaccaaaaagaagatgcatcttgttgatataggtagtaccaaacaattcttataagc--cttccttcaaccatgcagtctcatacctgcacg 1821937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 289 - 480
Target Start/End: Original strand, 42788564 - 42788761
Alignment:
Q  289 tgttttgtcctcactcacacgcttttcgtgaaactttcctgaaggtcacccatcccaaaattgctccaagtcaagca--------tgttaagttcttatg 380  Q
    |||||||||||||||| || ||||  || ||||||| || | |||||||| ||||||||||||||||||||||||||        |||  ||||||| ||    
T  42788564 tgttttgtcctcactcgcaagcttaccgagaaacttcccggtaggtcacctatcccaaaattgctccaagtcaagcacgcttaactgtggagttcttgtg 42788663  T
Q  381 atttcggctaccacaaagaatatgcatcttgtttgtatagttagtatcaaacaattgttataagcctcttctttcaaccatgatgtcccatacctacacg 480  Q
       |  ||||||  |||||| ||||||||||||  ||||| ||||| ||||||||| |||||||  ||||||||||||||||  ||||||  ||||||||    
T  42788664 gaatgagctaccgaaaagaagatgcatcttgttgatataggtagtaccaaacaattcttataag--tcttctttcaaccatgtagtcccaatcctacacg 42788761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 371 - 480
Target Start/End: Original strand, 27646843 - 27646950
Alignment:
Q  371 agttcttatgatttcggctaccacaaagaatatgcatcttgtttgtatagttagtatcaaacaattgttataagcctcttctttcaaccatgatgtccca 470  Q
    |||||||||||  | |||||||| |||||| ||||||||||||  ||||| ||||| ||||||||| ||||||||  |||| ||||||||||  | ||||    
T  27646843 agttcttatgaaatgggctaccaaaaagaagatgcatcttgttgttataggtagtaccaaacaattcttataagc--cttccttcaaccatgtagcccca 27646940  T
Q  471 tacctacacg 480  Q
    ||||||||||    
T  27646941 tacctacacg 27646950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 388 - 513
Target Start/End: Original strand, 10926971 - 10927090
Alignment:
Q  388 ctaccacaaagaatatgcatcttgtttgtatagttagtatcaaacaattgttataagcctcttctttcaaccatgatgtcccatacctacacgtacaata 487  Q
    |||||| || ||| ||||||||||||  ||||| ||||| ||||||||| ||||||||  |||| ||||||||||  ||||||||||||||||    |      
T  10926971 ctaccaaaaggaagatgcatcttgttgatataggtagtaccaaacaattcttataagc--cttccttcaaccatgtagtcccatacctacacg----acc 10927064  T
Q  488 tcaggatccctctcattcttatgtga 513  Q
    ||||||||||||||||||| ||||||    
T  10927065 tcaggatccctctcattctgatgtga 10927090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 289 - 365
Target Start/End: Complemental strand, 2474633 - 2474557
Alignment:
Q  289 tgttttgtcctcactcacacgcttttcgtgaaactttcctgaaggtcacccatcccaaaattgctccaagtcaagca 365  Q
    |||||| ||||||||| || ||||  || |||||||||| | |||||||||||| ||||||||||||||||||||||    
T  2474633 tgttttttcctcactcgcatgcttaccgggaaactttccggtaggtcacccatctcaaaattgctccaagtcaagca 2474557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 289 - 365
Target Start/End: Original strand, 3886975 - 3887051
Alignment:
Q  289 tgttttgtcctcactcacacgcttttcgtgaaactttcctgaaggtcacccatcccaaaattgctccaagtcaagca 365  Q
    |||||||||||||||| |||||||   | ||||||| || | ||||||||||||| |||||||||||||||||||||    
T  3886975 tgttttgtcctcactcgcacgcttactgggaaacttcccagtaggtcacccatccaaaaattgctccaagtcaagca 3887051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 289 - 361
Target Start/End: Complemental strand, 22556764 - 22556692
Alignment:
Q  289 tgttttgtcctcactcacacgcttttcgtgaaactttcctgaaggtcacccatcccaaaattgctccaagtca 361  Q
    |||||||||||||||| |||||||  || ||||||| |  | |||||||||||||||||||||||||||||||    
T  22556764 tgttttgtcctcactcgcacgcttaccgagaaacttcctggtaggtcacccatcccaaaattgctccaagtca 22556692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 289 - 365
Target Start/End: Complemental strand, 34372296 - 34372220
Alignment:
Q  289 tgttttgtcctcactcacacgcttttcgtgaaactttcctgaaggtcacccatcccaaaattgctccaagtcaagca 365  Q
    |||||| ||||||||| ||||||| |||  |||||| || | |||||||| ||||||||||||||||||||||||||    
T  34372296 tgttttttcctcactcgcacgcttatcggaaaacttcccggtaggtcaccaatcccaaaattgctccaagtcaagca 34372220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 291 - 366
Target Start/End: Original strand, 2058578 - 2058653
Alignment:
Q  291 ttttgtcctcactcacacgcttttcgtgaaactttcctgaaggtcacccatcccaaaattgctccaagtcaagcat 366  Q
    |||||| |||||||||||| |||||| || ||||    ||||||||| ||||||||||||||||||||||||||||    
T  2058578 ttttgtactcactcacacgtttttcgggagacttcttagaaggtcactcatcccaaaattgctccaagtcaagcat 2058653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 331 - 478
Target Start/End: Complemental strand, 2194002 - 2193849
Alignment:
Q  331 aggtcacccatcccaaaattgctccaagtcaagca--------tgttaagttcttatgatttcggctaccacaaagaatatgcatcttgtttgtatagtt 422  Q
    |||||||||||||||||||||||||||||||||||        |||  ||||||||||   |  ||||||  |||||| ||||||||||||  ||||| |    
T  2194002 aggtcacccatcccaaaattgctccaagtcaagcacgcttaactgtggagttcttatggaatgagctaccgaaaagaagatgcatcttgttgatataggt 2193903  T
Q  423 agtatcaaacaattgttataagcctcttctttcaaccatgatgtcccatacctaca 478  Q
    |||| | ||||||| ||||||||  |||| ||||||||||  ||||||||||||||    
T  2193902 agtacccaacaattcttataagc--cttccttcaaccatgtagtcccatacctaca 2193849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 289 - 480
Target Start/End: Original strand, 8641953 - 8642149
Alignment:
Q  289 tgttttgtcctcactcacacgcttttcgtgaaactttcctgaaggtcacccatcccaaaattgctccaagtcaagca--------tgttaagttcttatg 380  Q
    |||||||||||||||| |||||||  || ||||||| || | ||||||||||||  |||||||||||||||||||||        |||  ||||||||||    
T  8641953 tgttttgtcctcactcgcacgcttaccgagaaacttccc-gtaggtcacccatcttaaaattgctccaagtcaagcacgcttaactgtggagttcttatg 8642051  T
Q  381 atttcggctaccacaaagaatatgcatcttgtttgtatagttagtatcaaacaattgttataagcctcttctttcaaccatgatgtcccatacctacacg 480  Q
       |  ||||||  |||||| ||||||||||||  ||||| ||||| |||| |||| ||||||||  |||| ||||||||||  ||||||||||| ||||    
T  8642052 gaatgagctaccgaaaagaagatgcatcttgttgatataggtagtaccaaataattcttataagc--cttccttcaaccatgcagtcccatacctgcacg 8642149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 386 - 480
Target Start/End: Original strand, 10927426 - 10927518
Alignment:
Q  386 ggctaccacaaagaatatgcatcttgtttgtatagttagtatcaaacaattgttataagcctcttctttcaaccatgatgtcccatacctacacg 480  Q
    |||||||| |||||| ||||||||||||  ||||| ||||| ||||||||| ||||||||  |||| ||||||||||  ||| ||||||||||||    
T  10927426 ggctaccaaaaagaagatgcatcttgttgatataggtagtaccaaacaattcttataagc--cttccttcaaccatgtagtctcatacctacacg 10927518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 291 - 479
Target Start/End: Original strand, 15512932 - 15513127
Alignment:
Q  291 ttttgtcctcactcacacgcttttcgtgaaactttcctgaaggtcacccatcccaaaattgctccaagtcaagca--------tgttaagttcttatgat 382  Q
    |||||||||||||| |||||||  || ||||||| || | |||||| |||||||||||||||| |||||||||||        |||  ||||||||||      
T  15512932 ttttgtcctcactcgcacgcttaccgggaaacttcccggtaggtcatccatcccaaaattgcttcaagtcaagcacgtttaattgtggagttcttatgga 15513031  T
Q  383 ttcggctaccacaaagaatatgcatcttgtttgtatagttagtatcaaacaattgttataagcctcttctttcaaccatgatgtcccatacctacac 479  Q
     |  | ||||| |||||| ||||||||||||  ||| | ||||| | ||||||| |||||||| | ||| ||||||||||  |||||||||||||||    
T  15513032 atgagataccaaaaagaagatgcatcttgttgatattggtagta-ccaacaattcttataagcatattccttcaaccatgtagtcccatacctacac 15513127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 289 - 444
Target Start/End: Original strand, 16370629 - 16370789
Alignment:
Q  289 tgttttgtcctcactcacacgcttttcgtgaaactttcctgaaggtcacccatcccaaaattgctccaagtcaagcatg-ttaagttc----ttatgatt 383  Q
    |||||| |||||| || ||||||||  | |||||||| | ||| |||||||||||||||||||||||||||||| |||| |||| | |    || |||||    
T  16370629 tgttttttcctcattcgcacgctttatgagaaacttttcagaatgtcacccatcccaaaattgctccaagtcaaacatgcttaactgcggggttctgatt 16370728  T
Q  384 tcggctaccacaaagaatatgcatcttgtttgtatagttagtatcaaacaattgttataag 444  Q
    | |||||||| |||||| || | |||||||  ||||  ||||| ||||||||| |||||||    
T  16370729 taggctaccaaaaagaagatacgtcttgttgatataagtagtaccaaacaattcttataag 16370789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 386 - 480
Target Start/End: Complemental strand, 39147062 - 39146970
Alignment:
Q  386 ggctaccacaaagaatatgcatcttgtttgtatagttagtatcaaacaattgttataagcctcttctttcaaccatgatgtcccatacctacacg 480  Q
    |||||||| |||||| ||||||||||||  ||||  ||||||||||||||| |||||||  ||| | ||||||||||  ||||||||||||||||    
T  39147062 ggctaccaaaaagaagatgcatcttgttaatataagtagtatcaaacaattcttataag--tctaccttcaaccatgtagtcccatacctacacg 39146970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 289 - 365
Target Start/End: Original strand, 30720178 - 30720254
Alignment:
Q  289 tgttttgtcctcactcacacgcttttcgtgaaactttcctgaaggtcacccatcccaaaattgctccaagtcaagca 365  Q
    |||||||||||| ||| |||||||||||  || |||||  ||| |||| |||||||||||||| |||||||||||||    
T  30720178 tgttttgtcctcgctcgcacgcttttcggaaagctttcaagaaagtcatccatcccaaaattgttccaagtcaagca 30720254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 331 - 365
Target Start/End: Complemental strand, 2474145 - 2474111
Alignment:
Q  331 aggtcacccatcccaaaattgctccaagtcaagca 365  Q
    |||||||||||||||||||||||||||||||||||    
T  2474145 aggtcacccatcccaaaattgctccaagtcaagca 2474111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 289 - 367
Target Start/End: Complemental strand, 18304659 - 18304581
Alignment:
Q  289 tgttttgtcctcactcacacgcttttcgtgaaactttcctgaaggtcacccatcccaaaattgctccaagtcaagcatg 367  Q
    |||||||||||||||| |||  |||  |||||||||  |  ||||||||||||| ||||||||||||||||||| ||||    
T  18304659 tgttttgtcctcactcgcacaatttctgtgaaacttctcaaaaggtcacccatcacaaaattgctccaagtcaaacatg 18304581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 371 - 480
Target Start/End: Complemental strand, 34867928 - 34867821
Alignment:
Q  371 agttcttatgatttcggctaccacaaagaatatgcatcttgtttgtatagttagtatcaaacaattgttataagcctcttctttcaaccatgatgtccca 470  Q
    |||||||||||  |  ||||||  |||||| ||||||||||||  ||||| ||||| ||||||||| ||||||||  |||| ||||||||||  ||||||    
T  34867928 agttcttatgaaatgagctaccgaaaagaagatgcatcttgttgatataggtagtaccaaacaattcttataagc--cttccttcaaccatgcagtccca 34867831  T
Q  471 tacctacacg 480  Q
    ||||| ||||    
T  34867830 tacctgcacg 34867821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 289 - 362
Target Start/End: Original strand, 3886519 - 3886592
Alignment:
Q  289 tgttttgtcctcactcacacgcttttcgtgaaactttcctgaaggtcacccatcccaaaattgctccaagtcaa 362  Q
    |||||||||||||||| |||||||   | ||||||| || | ||||||||||||| |||||||||||| |||||    
T  3886519 tgttttgtcctcactcgcacgcttactgggaaacttcccggtaggtcacccatccaaaaattgctccacgtcaa 3886592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 396 - 480
Target Start/End: Original strand, 17445488 - 17445570
Alignment:
Q  396 aagaatatgcatcttgtttgtatagttagtatcaaacaattgttataagcctcttctttcaaccatgatgtcccatacctacacg 480  Q
    ||||| ||||||||||||  ||||| ||||| ||||||||| ||||||||  |||| ||||||||||  ||||||| ||||||||    
T  17445488 aagaagatgcatcttgttgatataggtagtaccaaacaattcttataagc--cttccttcaaccatgtagtcccatgcctacacg 17445570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 386 - 534
Target Start/End: Original strand, 20039498 - 20039638
Alignment:
Q  386 ggctaccacaaagaatatgcatcttgtttgtatagttagtatcaaacaattgttataagcctcttctttcaaccatgatgtcccatacctacacgtacaa 485  Q
    |||||||| |||||| ||||||||||||  ||||| ||||| ||||||||| ||||||||  |||| |||||| |||  |||| |||||||||||  |      
T  20039498 ggctacca-aaagaaaatgcatcttgttgatataggtagtaccaaacaattcttataagc--cttccttcaactatgtagtcctatacctacacggcc-- 20039592  T
Q  486 tatcaggatccctctcattcttatgtgaattcagtttgcctagaagctg 534  Q
      ||| ||||||||||||||  ||||| |||| ||||| ||||||||||    
T  20039593 --tcatgatccctctcattccgatgtg-attcggtttgtctagaagctg 20039638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 289 - 365
Target Start/End: Original strand, 20858460 - 20858535
Alignment:
Q  289 tgttttgtcctcactcacacgcttttcgtgaaactttcctgaaggtcacccatcccaaaattgctccaagtcaagca 365  Q
    |||||||||||||||  || |||||||   |||||| || |||||||||| |||||||| |||||||||||||||||    
T  20858460 tgttttgtcctcactagcatgcttttcagaaaacttcccagaaggtcacc-atcccaaagttgctccaagtcaagca 20858535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 289 - 365
Target Start/End: Original strand, 30684929 - 30685005
Alignment:
Q  289 tgttttgtcctcactcacacgcttttcgtgaaactttcctgaaggtcacccatcccaaaattgctccaagtcaagca 365  Q
    |||||||||||| ||  |||||||||||  ||||||||  ||| |||| ||||| |||||||| |||||||||||||    
T  30684929 tgttttgtcctcgcttgcacgcttttcggaaaactttcaagaaagtcatccatctcaaaattgttccaagtcaagca 30685005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 388 - 480
Target Start/End: Original strand, 4658018 - 4658107
Alignment:
Q  388 ctaccacaaagaatatgcatcttgtttgtatagttagtatcaaacaattgttataagcctcttctttcaaccatgatgtcccatacctacacg 480  Q
    |||||| |||||| |||||| |||||  ||||| ||||||||||||| | ||||||   ||||| ||||||||||| ||| ||||||| ||||    
T  4658018 ctaccaaaaagaagatgcatgttgttgttataggtagtatcaaacaagtcttataa---tcttcgttcaaccatgaagtctcatacctgcacg 4658107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 333 - 436
Target Start/End: Complemental strand, 5549525 - 5549418
Alignment:
Q  333 gtcacccatcccaaaattgctccaagtcaagcatgtt----aagttcttatgatttcggctaccacaaagaatatgcatcttgtttgtatagttagtatc 428  Q
    ||||||||||| ||||||| ||| ||||||||| |||    || |||||||| ||| |||||||| ||||||||  ||| ||||| |||||  ||||| |    
T  5549525 gtcacccatcctaaaattgttcctagtcaagcacgtttaacaaattcttatggtttgggctaccaaaaagaataaacatattgttggtatacgtagtacc 5549426  T
Q  429 aaacaatt 436  Q
    ||||||||    
T  5549425 aaacaatt 5549418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 329 - 363
Target Start/End: Original strand, 18750154 - 18750188
Alignment:
Q  329 gaaggtcacccatcccaaaattgctccaagtcaag 363  Q
    ||||||||||||||| |||||||||||||||||||    
T  18750154 gaaggtcacccatcctaaaattgctccaagtcaag 18750188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 395 - 480
Target Start/End: Complemental strand, 22556650 - 22556567
Alignment:
Q  395 aaagaatatgcatcttgtttgtatagttagtatcaaacaattgttataagcctcttctttcaaccatgatgtcccatacctacacg 480  Q
    |||||| ||||||||||||  ||||| ||||| |||||||||  |||||||  |||| ||||||||||  ||||||||||| ||||    
T  22556650 aaagaagatgcatcttgttgatataggtagtaccaaacaattcatataagc--cttccttcaaccatgcagtcccatacctgcacg 22556567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 387 - 475
Target Start/End: Original strand, 21886170 - 21886256
Alignment:
Q  387 gctaccacaaagaatatgcatcttgtttgtatagttagtatcaaacaattgttataagcctcttctttcaaccatgatgtcccatacct 475  Q
    ||||||  |||||| ||||||||||||  ||||  ||||| ||||||||| ||||||||  |||| ||||||||||  |||||||||||    
T  21886170 gctaccgaaaagaagatgcatcttgttgatatatgtagtaccaaacaattcttataagc--cttccttcaaccatgcagtcccatacct 21886256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 329 - 365
Target Start/End: Complemental strand, 4102984 - 4102948
Alignment:
Q  329 gaaggtcacccatcccaaaattgctccaagtcaagca 365  Q
    ||||||||| |||| ||||||||||||||||||||||    
T  4102984 gaaggtcactcatctcaaaattgctccaagtcaagca 4102948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 395 - 447
Target Start/End: Original strand, 11160713 - 11160765
Alignment:
Q  395 aaagaatatgcatcttgtttgtatagttagtatcaaacaattgttataagcct 447  Q
    |||||||||||||||||||   |||| ||||| ||||||||| ||||||||||    
T  11160713 aaagaatatgcatcttgttgacatagatagtaccaaacaattattataagcct 11160765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 395 - 443
Target Start/End: Original strand, 18750228 - 18750276
Alignment:
Q  395 aaagaatatgcatcttgtttgtatagttagtatcaaacaattgttataa 443  Q
    |||||| ||||||||| || |||||| ||||| ||||||||||||||||    
T  18750228 aaagaagatgcatctttttggtataggtagtaccaaacaattgttataa 18750276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 54; Significance: 1e-21; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 286 - 475
Target Start/End: Original strand, 107378 - 107573
Alignment:
Q  286 gcatgttttgtcctcactcacacgcttttcgtgaaactttcctgaaggtcacccatcccaaaattgctccaagtcaagca--------tgttaagttctt 377  Q
    ||||||||||||||||||| |||||||  || ||||||| || | | |||||||||||||||||||||||||||||||||        |||  |||||||    
T  107378 gcatgttttgtcctcactcgcacgcttaccgggaaacttcccggtacgtcacccatcccaaaattgctccaagtcaagcacgcttaactgtggagttctt 107477  T
Q  378 atgatttcggctaccacaaagaatatgcatcttgtttgtatagttagtatcaaacaattgttataagcctcttctttcaaccatgatgtcccatacct 475  Q
    |||   |  ||||||  |||||| ||||||||||||  ||| | ||||||||||||||| ||||||||  |||| ||||||||||  |||||||||||    
T  107478 atggaatgagctaccgaaaagaagatgcatcttgttgatattggtagtatcaaacaattcttataagc--cttccttcaaccatgcagtcccatacct 107573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 53; Significance: 4e-21; HSPs: 33)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 289 - 365
Target Start/End: Complemental strand, 7646643 - 7646567
Alignment:
Q  289 tgttttgtcctcactcacacgcttttcgtgaaactttcctgaaggtcacccatcccaaaattgctccaagtcaagca 365  Q
    |||||||||||||||| ||||||| |||  ||||||||| | |||||||||||||||||||||||||||||||||||    
T  7646643 tgttttgtcctcactcgcacgcttatcggaaaactttccggtaggtcacccatcccaaaattgctccaagtcaagca 7646567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 289 - 480
Target Start/End: Complemental strand, 2193484 - 2193287
Alignment:
Q  289 tgttttgtcctcactcacacgcttttcgtgaaactttcctgaaggtcacccatcccaaaattgctccaagtcaagca--------tgttaagttcttatg 380  Q
    ||||||||||||||||||||||||  || ||||||| || | ||||||||||||||||||||||||||| |||||||        |||  ||||| ||||    
T  2193484 tgttttgtcctcactcacacgcttaccgggaaacttcccggtaggtcacccatcccaaaattgctccaaatcaagcacgcttaactgtggagttcctatg 2193385  T
Q  381 atttcggctaccacaaagaatatgcatcttgtttgtatagttagtatcaaacaattgttataagcctcttctttcaaccatgatgtcccatacctacacg 480  Q
    |  |  ||||||  | |||| ||||||||||||  ||||| ||||| ||||||||| ||||||||  |||| ||||||||||  ||||||||||| ||||    
T  2193384 aaatgagctaccgaatagaagatgcatcttgttgatataggtagtaccaaacaattcttataagc--cttccttcaaccatgcagtcccatacctgcacg 2193287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 289 - 532
Target Start/End: Original strand, 2941675 - 2941920
Alignment:
Q  289 tgttttgtcctcactcacacgcttttcgtgaaactttcctgaaggtcacccatcccaaaattgctccaagtcaagca--------tgttaagttcttatg 380  Q
    |||||| ||||||||| |||||||  || ||||||| || | |||||||||||||||||||||||||||||||||||        |||  ||||||||||    
T  2941675 tgttttctcctcactcgcacgcttaccgggaaacttcccggtaggtcacccatcccaaaattgctccaagtcaagcacgcttaactgtggagttcttatg 2941774  T
Q  381 atttcggctaccacaaagaatatgcatcttgtttgtatagttagtatcaaacaattgttataagcctcttctttcaaccatgatgtcccatacctacacg 480  Q
       |  ||||||  |||||| ||||||||||||  ||||| ||||| ||||||||| |||| |||  |||| ||||||||||  |||||||||||    |    
T  2941775 gaatgagctaccgaaaagaagatgcatcttgttgatataggtagtaccaaacaattcttatcagc--cttccttcaaccatgcagtcccatacct----g 2941868  T
Q  481 tacaatatcaggatccctctcattcttatgtgaattcag-tttgcctagaagc 532  Q
    |||    ||||||||||||||||||| ||||| |||||| |||||||||||||    
T  2941869 tacggcctcaggatccctctcattctgatgtg-attcagttttgcctagaagc 2941920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 289 - 475
Target Start/End: Complemental strand, 2189372 - 2189180
Alignment:
Q  289 tgttttgtcctcactcacacgcttttcgtgaaactttcctgaaggtcacccatcccaaaattgctccaagtcaagca--------tgttaagttcttatg 380  Q
    ||||||||||||||||||||||||  || ||||||| || | ||||||| |||||||||||||||||||||||||||        |||  ||||||||||    
T  2189372 tgttttgtcctcactcacacgcttaccgggaaacttcccggtaggtcactcatcccaaaattgctccaagtcaagcacgcttaactgtggagttcttatg 2189273  T
Q  381 atttcggctaccacaaagaatatgcatcttgtttgtatagttagtatcaaacaattgttataagcctcttctttcaaccatgatgtcccatacct 475  Q
    |  |  |||| |  |||||| ||||||||||||  ||||| ||||  ||||||||| ||||||||  |||||||||||||||  |||||| ||||    
T  2189272 aaatgagctatcgaaaagaagatgcatcttgttgatataggtagtgccaaacaattcttataagc--cttctttcaaccatgcagtcccacacct 2189180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 289 - 478
Target Start/End: Original strand, 34405509 - 34405704
Alignment:
Q  289 tgttttgtcctcactcacacgcttttcgtgaaactttcctgaaggtcacccatcccaaaattgctccaagtcaagca--------tgttaagttcttatg 380  Q
    |||||||||||||||| |||||||  || ||||||| || | |||||||||||||||||||||||||||||||||||        |||  ||||||||||    
T  34405509 tgttttgtcctcactcgcacgcttaccgggaaacttcccggtaggtcacccatcccaaaattgctccaagtcaagcacgcttaactgtggagttcttatg 34405608  T
Q  381 atttcggctaccacaaagaatatgcatcttgtttgtatagttagtatcaaacaattgttataagcctcttctttcaaccatgatgtcccatacctaca 478  Q
       |  ||||||  |||||| ||||||| ||||  ||||| ||||| | ||||||| ||||||||  |||| ||||||||||  ||||||||||||||    
T  34405609 gaatgagctaccgaaaagaagatgcatcctgttgatataggtagtacccaacaattcttataagc--cttccttcaaccatgtagtcccatacctaca 34405704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 289 - 534
Target Start/End: Complemental strand, 42515772 - 42515526
Alignment:
Q  289 tgttttgtcctcactcacacgcttttcgtgaaactttcc-tgaaggtcacccatcccaaaattgctccaagtcaagca--------tgttaagttcttat 379  Q
    |||||||||||||||| |||||||  || |||| ||||| || |||||||||||||||||||||||||||||||||||        |||  |||||||||    
T  42515772 tgttttgtcctcactcgcacgcttaccg-gaaaatttccatgtaggtcacccatcccaaaattgctccaagtcaagcacgcttaactgtggagttcttat 42515674  T
Q  380 gatttcggctaccacaaagaatatgcatcttgtttgtatagttagtatcaaacaattgttataagcctcttctttcaaccatgatgtcccatacctacac 479  Q
    |   |  ||||||  |||||| ||||||||||||  ||||| ||||| |||||| || ||||||||  |||| ||||||||||  ||| |||||||||||    
T  42515673 ggaatgagctaccgaaaagaagatgcatcttgttgatataggtagtaccaaacacttcttataagc--cttccttcaaccatgtagtctcatacctacac 42515576  T
Q  480 gtacaatatcaggatccctctcattcttatgtgaattcagtttgcctagaagctg 534  Q
    |  |    ||||||||||||||||||| ||||| |||| ||| | ||||||||||    
T  42515575 ggcc----tcaggatccctctcattctgatgtg-attcggttcgtctagaagctg 42515526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 291 - 475
Target Start/End: Original strand, 13125056 - 13125246
Alignment:
Q  291 ttttgtcctcactcacacgcttttcgtgaaactttcctgaaggtcacccatcccaaaattgctccaagtcaagca--------tgttaagttcttatgat 382  Q
    |||||||||||||| |||||||   | ||||||| || | |||||||||||||||||||||||||||||||||||        |||  ||||||||||      
T  13125056 ttttgtcctcactcgcacgcttactgggaaacttcccggtaggtcacccatcccaaaattgctccaagtcaagcacgcttaactgtggagttcttatgga 13125155  T
Q  383 ttcggctaccacaaagaatatgcatcttgtttgtatagttagtatcaaacaattgttataagcctcttctttcaaccatgatgtcccatacct 475  Q
     |  ||||||  |||||| ||||||||||||  ||||| ||||| ||||||||| ||||||||  |||| ||||||||||  |||||||||||    
T  13125156 atgagctaccgaaaagaagatgcatcttgttaatataggtagtaccaaacaattcttataagc--cttccttcaaccatgcagtcccatacct 13125246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 289 - 480
Target Start/End: Complemental strand, 28496082 - 28495885
Alignment:
Q  289 tgttttgtcctcactcacacgcttttcgtgaaactttcctgaaggtcacccatcccaaaattgctccaagtcaagca--------tgttaagttcttatg 380  Q
    |||||||||||||||| |||||||  || ||||||| ||   |||||||||||||||||||||||||||||||||||        |||  ||||||||||    
T  28496082 tgttttgtcctcactcgcacgcttaccgggaaacttcccaataggtcacccatcccaaaattgctccaagtcaagcacgcttaactgtggagttcttatg 28495983  T
Q  381 atttcggctaccacaaagaatatgcatcttgtttgtatagttagtatcaaacaattgttataagcctcttctttcaaccatgatgtcccatacctacacg 480  Q
       |  ||||||  |||||| ||||||||||||  ||||| ||||| | |||| || ||||||||  |||| ||||||||||  ||||||||||||||||    
T  28495982 gaatgagctaccgaaaagaagatgcatcttgttgatataggtagtacccaacagttcttataagc--cttccttcaaccatgtagtcccatacctacacg 28495885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 289 - 478
Target Start/End: Complemental strand, 36422479 - 36422285
Alignment:
Q  289 tgttttgtcctcactcacacgcttttcgtgaaactttcctgaaggtcacccatcccaaaattgctccaagtcaagca--------tgttaagttcttatg 380  Q
    |||||||||||||||| ||| |||  || ||||||| || | |||||||||||||| ||||||||||||||||||||        |||  ||||||||||    
T  36422479 tgttttgtcctcactcgcacacttaccgggaaacttcccggtaggtcacccatccc-aaattgctccaagtcaagcacgcttaactgtggagttcttatg 36422381  T
Q  381 atttcggctaccacaaagaatatgcatcttgtttgtatagttagtatcaaacaattgttataagcctcttctttcaaccatgatgtcccatacctaca 478  Q
    |  |  ||||||  |||||| ||||||||||||  ||||| ||||| | ||||||| ||||||||  |||| ||||||||||  ||||||||||||||    
T  36422380 aaatgagctaccgaaaagaagatgcatcttgttgatataggtagtacccaacaattcttataagc--cttccttcaaccatgtagtcccatacctaca 36422285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 289 - 365
Target Start/End: Original strand, 7646396 - 7646472
Alignment:
Q  289 tgttttgtcctcactcacacgcttttcgtgaaactttcctgaaggtcacccatcccaaaattgctccaagtcaagca 365  Q
    |||||||||||||||| ||| |||  || ||||||| || | |||||||||||||||||||||||||||||||||||    
T  7646396 tgttttgtcctcactcgcacacttaccgagaaacttcccggtaggtcacccatcccaaaattgctccaagtcaagca 7646472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 286 - 365
Target Start/End: Complemental strand, 9125190 - 9125111
Alignment:
Q  286 gcatgttttgtcctcactcacacgcttttcgtgaaactttcctgaaggtcacccatcccaaaattgctccaagtcaagca 365  Q
    ||||||||||||||||||| |||||||  ||  |||||| || | ||||||||||||||||||||||||| |||||||||    
T  9125190 gcatgttttgtcctcactcgcacgcttaccggaaaacttcccggtaggtcacccatcccaaaattgctccgagtcaagca 9125111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 289 - 474
Target Start/End: Original strand, 5406505 - 5406697
Alignment:
Q  289 tgttttgtcctcactcacacgctttt-cgtgaaactttcctgaaggtcacccatcccaaaattgctccaagtcaagca--------tgttaagttcttat 379  Q
    |||||||||||||||| |||| |||| ||  ||||||||| ||| |||| ||||||||||||||||| ||||||||||        |||  |||||||||    
T  5406505 tgttttgtcctcactcgcacgttttttcggaaaactttccagaaagtcatccatcccaaaattgctcaaagtcaagcacgcttaactgtggagttcttat 5406604  T
Q  380 gatttcggctaccacaaagaatatgcatcttgtttgtatagttagtatcaaacaattgttataagcctcttctttcaaccatgatgtcccatacc 474  Q
    | ||| ||| |||| ||| || ||||||||||||  ||||| || || ||||||||| ||||||   ||||| ||||||||||  ||||||||||    
T  5406605 ggtttgggcaaccaaaaataagatgcatcttgttgatataggtaataccaaacaattcttataa--atcttccttcaaccatgcagtcccatacc 5406697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 291 - 365
Target Start/End: Original strand, 13122425 - 13122499
Alignment:
Q  291 ttttgtcctcactcacacgcttttcgtgaaactttcctgaaggtcacccatcccaaaattgctccaagtcaagca 365  Q
    |||||||||||||| |||||||  || ||||||| || | ||||||||||||||||||||||||||| |||||||    
T  13122425 ttttgtcctcactcgcacgcttaccgggaaacttcccggtaggtcacccatcccaaaattgctccaaatcaagca 13122499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 289 - 362
Target Start/End: Complemental strand, 18833514 - 18833441
Alignment:
Q  289 tgttttgtcctcactcacacgcttttcgtgaaactttcctgaaggtcacccatcccaaaattgctccaagtcaa 362  Q
    |||||||||||||||| |||| ||  || ||||||| || | |||||||||||||||||||||||| |||||||    
T  18833514 tgttttgtcctcactcgcacgtttaccgggaaacttcccggtaggtcacccatcccaaaattgctcaaagtcaa 18833441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 386 - 534
Target Start/End: Complemental strand, 679939 - 679799
Alignment:
Q  386 ggctaccacaaagaatatgcatcttgtttgtatagttagtatcaaacaattgttataagcctcttctttcaaccatgatgtcccatacctacacgtacaa 485  Q
    |||||||| |||||||||||||||||||  ||||| ||||| | ||||||| ||||||||  |||| |||| |||||   |||||||||||||||    |    
T  679939 ggctaccaaaaagaatatgcatcttgttgatataggtagta-ccaacaattcttataagc--cttccttcagccatgtactcccatacctacacg----a 679847  T
Q  486 tatcaggatccctctcattcttatgtgaattcagtttgcctagaagctg 534  Q
      ||||||||||||||||||| ||||| ||||||||   ||||||||||    
T  679846 cctcaggatccctctcattctgatgtg-attcagttcctctagaagctg 679799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 289 - 365
Target Start/End: Original strand, 37671679 - 37671755
Alignment:
Q  289 tgttttgtcctcactcacacgcttttcgtgaaactttcctgaaggtcacccatcccaaaattgctccaagtcaagca 365  Q
    ||||| |||||||||||||||||||  | |||||||| |  ||||| ||||||| |||||||||||||| |||||||    
T  37671679 tgtttggtcctcactcacacgctttatgagaaacttttcaaaaggtgacccatcacaaaattgctccaattcaagca 37671755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 331 - 365
Target Start/End: Complemental strand, 2465919 - 2465885
Alignment:
Q  331 aggtcacccatcccaaaattgctccaagtcaagca 365  Q
    |||||||||||||||||||||||||||||||||||    
T  2465919 aggtcacccatcccaaaattgctccaagtcaagca 2465885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 331 - 365
Target Start/End: Original strand, 28495568 - 28495602
Alignment:
Q  331 aggtcacccatcccaaaattgctccaagtcaagca 365  Q
    |||||||||||||||||||||||||||||||||||    
T  28495568 aggtcacccatcccaaaattgctccaagtcaagca 28495602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 289 - 478
Target Start/End: Complemental strand, 2466152 - 2465957
Alignment:
Q  289 tgttttgtcctcactcacacgcttttcgtgaaactttcctgaaggtcacccatcccaaaattgctccaagtcaagca--------tgttaagttcttatg 380  Q
    |||||||||||||||  || ||||  || |||| || || | |||||||||||||| ||||||||||||||||||||        |||  ||||||||||    
T  2466152 tgttttgtcctcacttgcatgcttaccgggaaatttcccggtaggtcacccatcccgaaattgctccaagtcaagcacgcttaactgtggagttcttatg 2466053  T
Q  381 atttcggctaccacaaagaatatgcatcttgtttgtatagttagtatcaaacaattgttataagcctcttctttcaaccatgatgtcccatacctaca 478  Q
       |  ||||||  |||||| ||||| ||||||  ||||| ||||| ||||||| | ||||||||  |||| ||||||||||  ||||||||||||||    
T  2466052 gaatgagctaccgaaaagaagatgcaacttgttgatataggtagtaccaaacaactcttataagc--cttccttcaaccatgtagtcccatacctaca 2465957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 386 - 447
Target Start/End: Original strand, 2611675 - 2611736
Alignment:
Q  386 ggctaccacaaagaatatgcatcttgtttgtatagttagtatcaaacaattgttataagcct 447  Q
    |||||||| |||||| ||||||||||||  ||||| ||||| ||||||||| ||||||||||    
T  2611675 ggctaccaaaaagaagatgcatcttgttgttatagatagtaccaaacaattcttataagcct 2611736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 395 - 479
Target Start/End: Original strand, 6719106 - 6719188
Alignment:
Q  395 aaagaatatgcatcttgtttgtatagttagtatcaaacaattgttataagcctcttctttcaaccatgatgtcccatacctacac 479  Q
    |||||| ||||||||||||  ||||| ||||| ||||||||| ||||||||   ||| ||||||||||  |||||||||||||||    
T  6719106 aaagaagatgcatcttgttgatataggtagtaccaaacaattcttataagc--attccttcaaccatgtagtcccatacctacac 6719188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 386 - 531
Target Start/End: Original strand, 6747621 - 6747759
Alignment:
Q  386 ggctaccacaaagaatatgcatcttgtttgtatagttagtatcaaacaattgttataagcctcttctttcaaccatgatgtcccatacctacacgtacaa 485  Q
    |||||||| |||||| ||||||||||||  ||||| ||||| ||||||||| |||||| |  |||| ||||||||||  ||  ||||||||||||  |      
T  6747621 ggctaccaaaaagaagatgcatcttgttgatataggtagtaccaaacaattcttataatc--cttccttcaaccatgtagtatcatacctacacggcc-- 6747716  T
Q  486 tatcaggatccctctcattcttatgtgaattcagtttgcctagaag 531  Q
      ||||||||||||||||||  ||||| |||||| ||| |||||||    
T  6747717 --tcaggatccctctcattccaatgtg-attcagcttgtctagaag 6747759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 387 - 532
Target Start/End: Complemental strand, 42515214 - 42515075
Alignment:
Q  387 gctaccacaaagaatatgcatcttgtttgtatagttagtatcaaacaattgttataagcctcttctttcaaccatgatgtcccatacctacacgtacaat 486  Q
    ||||||| |||||| ||||||||||||  ||||| ||||| ||||||||| |||||||  ||||| ||||| ||||  ||| ||||||| ||||  |       
T  42515214 gctaccaaaaagaaaatgcatcttgttgatataggtagtaccaaacaattcttataag--tcttccttcaatcatgcagtctcatacctgcacggcc--- 42515120  T
Q  487 atcaggatccctctcattcttatgtgaattcagtttgcctagaagc 532  Q
     ||||||||||||||||||  |||||| |  | |||||||||||||    
T  42515119 -tcaggatccctctcattccgatgtgattcaattttgcctagaagc 42515075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 388 - 436
Target Start/End: Original strand, 7461375 - 7461423
Alignment:
Q  388 ctaccacaaagaatatgcatcttgtttgtatagttagtatcaaacaatt 436  Q
    |||||| |||||| ||| ||||||||| |||||||||||||||||||||    
T  7461375 ctaccaaaaagaagatgtatcttgtttatatagttagtatcaaacaatt 7461423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 399 - 478
Target Start/End: Original strand, 26421341 - 26421418
Alignment:
Q  399 aatatgcatcttgtttgtatagttagtatcaaacaattgttataagcctcttctttcaaccatgatgtcccatacctaca 478  Q
    |||||||||||||||  ||||| ||||||||| ||||| |||||||  ||||| |||||||||  || ||||||||||||    
T  26421341 aatatgcatcttgttgatataggtagtatcaagcaattcttataag--tcttccttcaaccatactgacccatacctaca 26421418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 395 - 478
Target Start/End: Complemental strand, 46425855 - 46425774
Alignment:
Q  395 aaagaatatgcatcttgtttgtatagttagtatcaaacaattgttataagcctcttctttcaaccatgatgtcccatacctaca 478  Q
    |||||| ||||||||||||  ||||| || || ||||||||| ||||||||  ||| |||||||||||  ||||||||||||||    
T  46425855 aaagaagatgcatcttgttgatataggtaataccaaacaattcttataagc--cttatttcaaccatgtagtcccatacctaca 46425774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 395 - 480
Target Start/End: Original strand, 29357488 - 29357571
Alignment:
Q  395 aaagaatatgcatcttgtttgtatagttagtatcaaacaattgttataagcctcttctttcaaccatgatgtcccatacctacacg 480  Q
    |||||| ||||||||||||  ||||||||||| ||||||||| |||||| |   ||| ||||||||||  ||||||||||| ||||    
T  29357488 aaagaagatgcatcttgttgatatagttagtaccaaacaattcttataaac--attccttcaaccatgcagtcccatacctgcacg 29357571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 395 - 460
Target Start/End: Original strand, 35527153 - 35527216
Alignment:
Q  395 aaagaatatgcatcttgtttgtatagttagtatcaaacaattgttataagcctcttctttcaacca 460  Q
    |||||||||||||||||||  ||||| ||| | ||||||||| ||||||||  |||||||||||||    
T  35527153 aaagaatatgcatcttgttgatataggtagcaccaaacaattcttataagc--cttctttcaacca 35527216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 331 - 365
Target Start/End: Original strand, 43776250 - 43776284
Alignment:
Q  331 aggtcacccatcccaaaattgctccaagtcaagca 365  Q
    ||||||||||| |||||||||||||||||||||||    
T  43776250 aggtcacccattccaaaattgctccaagtcaagca 43776284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 395 - 447
Target Start/End: Original strand, 22529267 - 22529319
Alignment:
Q  395 aaagaatatgcatcttgtttgtatagttagtatcaaacaattgttataagcct 447  Q
    |||||| ||||||||||||| ||||| ||||| |||||| || ||||||||||    
T  22529267 aaagaagatgcatcttgtttatatagatagtaccaaacatttcttataagcct 22529319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 287 - 343
Target Start/End: Original strand, 26419151 - 26419207
Alignment:
Q  287 catgttttgtcctcactcacacgcttttcgtgaaactttcctgaaggtcacccatcc 343  Q
    ||||||||||||||||||||| | |||||| |||| ||  | |||||||||||||||    
T  26419151 catgttttgtcctcactcacatgattttcgagaaaattctcagaaggtcacccatcc 26419207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 416 - 479
Target Start/End: Original strand, 26957610 - 26957671
Alignment:
Q  416 tatagttagtatcaaacaattgttataagcctcttctttcaaccatgatgtcccatacctacac 479  Q
    ||||| ||||| ||||||||| ||||||||||  |||||||||||||  || ||||||||||||    
T  26957610 tataggtagtaccaaacaattcttataagcct--tctttcaaccatgtagttccatacctacac 26957671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 289 - 365
Target Start/End: Original strand, 29038938 - 29039014
Alignment:
Q  289 tgttttgtcctcactcacacgcttttcgtgaaactttcctgaaggtcacccatcccaaaattgctccaagtcaagca 365  Q
    ||||||||||||| ||||||||||  || ||||||| || | |||||| |||||| || | | ||||||||||||||    
T  29038938 tgttttgtcctcagtcacacgcttaccgggaaacttaccggtaggtcatccatccaaagactactccaagtcaagca 29039014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0168 (Bit Score: 52; Significance: 2e-20; HSPs: 1)
Name: scaffold0168
Description:

Target: scaffold0168; HSP #1
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 289 - 480
Target Start/End: Complemental strand, 2970 - 2773
Alignment:
Q  289 tgttttgtcctcactcacacgcttttcgtgaaactttcctgaaggtcacccatcccaaaattgctccaagtcaagca--------tgttaagttcttatg 380  Q
    |||||||||||||||| ||| |||  || ||||||| || | ||||| |||||||||||||||||||||||||||||        |||  ||||||||||    
T  2970 tgttttgtcctcactcgcacacttaccgggaaacttcccggtaggtctcccatcccaaaattgctccaagtcaagcacgcttaactgtggagttcttatg 2871  T
Q  381 atttcggctaccacaaagaatatgcatcttgtttgtatagttagtatcaaacaattgttataagcctcttctttcaaccatgatgtcccatacctacacg 480  Q
       |  ||||||  |||||||||||||||||||  ||||| ||||| | ||||||| ||||||||  |||| ||||||||||  ||||||||||||||||    
T  2870 gaatgagctaccgaaaagaatatgcatcttgttgatataggtagtacccaacaattcttataagc--cttccttcaaccatgtagtcccatacctacacg 2773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0137 (Bit Score: 52; Significance: 2e-20; HSPs: 1)
Name: scaffold0137
Description:

Target: scaffold0137; HSP #1
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 292 - 367
Target Start/End: Complemental strand, 7167 - 7092
Alignment:
Q  292 tttgtcctcactcacacgcttttcgtgaaactttcctgaaggtcacccatcccaaaattgctccaagtcaagcatg 367  Q
    ||||||| |||||||| |||||||| ||||||||||  |||||||||||| |||||||||||||||||||||||||    
T  7167 tttgtccccactcacatgcttttcgggaaactttccaaaaggtcacccataccaaaattgctccaagtcaagcatg 7092  T

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Target: scaffold0040 (Bit Score: 52; Significance: 2e-20; HSPs: 1)
Name: scaffold0040
Description:

Target: scaffold0040; HSP #1
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 289 - 480
Target Start/End: Original strand, 2128 - 2325
Alignment:
Q  289 tgttttgtcctcactcacacgcttttcgtgaaactttcctgaaggtcacccatcccaaaattgctccaagtcaagca--------tgttaagttcttatg 380  Q
    |||||||||||||||| |||||||  ||  |||||| || | |||||||||||||||||||||||||||||||||||        | || ||||||||||    
T  2128 tgttttgtcctcactcgcacgcttaccggaaaacttcccggtaggtcacccatcccaaaattgctccaagtcaagcacgcttaactattgagttcttatg 2227  T
Q  381 atttcggctaccacaaagaatatgcatcttgtttgtatagttagtatcaaacaattgttataagcctcttctttcaaccatgatgtcccatacctacacg 480  Q
       |  ||||||  |||||| ||||||||||||  ||||| ||||| ||||||||| ||||||||  |||| ||||||||||  ||||||||||| ||||    
T  2228 gaataagctaccgaaaagaagatgcatcttgttgatataggtagtaccaaacaattcttataagc--cttccttcaaccatgtagtcccatacctgcacg 2325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0499 (Bit Score: 50; Significance: 2e-19; HSPs: 1)
Name: scaffold0499
Description:

Target: scaffold0499; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 291 - 480
Target Start/End: Original strand, 1971 - 2166
Alignment:
Q  291 ttttgtcctcactcacacgcttttcgtgaaactttcctgaaggtcacccatcccaaaattgctccaagtcaagca--------tgttaagttcttatgat 382  Q
    |||||||||||||| |||||||  || ||||||| || | |||||||||||||||||||||||||||||||||||        |||  ||||||||||      
T  1971 ttttgtcctcactcgcacgcttaccgggaaacttcccggtaggtcacccatcccaaaattgctccaagtcaagcacgcttaactgtggagttcttatgga 2070  T
Q  383 ttcggctaccacaaagaatatgcatcttgtttgtatagttagtatcaaacaattgttataagcctcttctttcaaccatgatgtcccatacctacacg 480  Q
     |  ||||||  |||||| ||||||||||||  ||||| ||||| ||||||||| ||||||||  |||| ||||||||||  ||| ||||||| ||||    
T  2071 atgagctaccgaaaagaagatgcatcttgttgatataggtagtaccaaacaattcttataagc--cttccttcaaccatgcagtctcatacctgcacg 2166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1519 (Bit Score: 49; Significance: 9e-19; HSPs: 1)
Name: scaffold1519
Description:

Target: scaffold1519; HSP #1
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 289 - 365
Target Start/End: Original strand, 1619 - 1695
Alignment:
Q  289 tgttttgtcctcactcacacgcttttcgtgaaactttcctgaaggtcacccatcccaaaattgctccaagtcaagca 365  Q
    ||||||||||||||||||| ||||  || ||||||| || | |||||||||||||||||||||||||||||||||||    
T  1619 tgttttgtcctcactcacatgcttaccgggaaacttcccggtaggtcacccatcccaaaattgctccaagtcaagca 1695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0217 (Bit Score: 49; Significance: 9e-19; HSPs: 1)
Name: scaffold0217
Description:

Target: scaffold0217; HSP #1
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 289 - 365
Target Start/End: Complemental strand, 538 - 462
Alignment:
Q  289 tgttttgtcctcactcacacgcttttcgtgaaactttcctgaaggtcacccatcccaaaattgctccaagtcaagca 365  Q
    ||||||||||||||||||| |||| ||| ||||||| || | |||||||||||||||||||||||||| ||||||||    
T  538 tgttttgtcctcactcacatgcttatcgggaaacttcccggtaggtcacccatcccaaaattgctccatgtcaagca 462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0277 (Bit Score: 48; Significance: 4e-18; HSPs: 1)
Name: scaffold0277
Description:

Target: scaffold0277; HSP #1
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 286 - 365
Target Start/End: Original strand, 14617 - 14696
Alignment:
Q  286 gcatgttttgtcctcactcacacgcttttcgtgaaactttcctgaaggtcacccatcccaaaattgctccaagtcaagca 365  Q
    ||||||||||||||||||| ||| |||  || ||||||| || | |||||||||||||||||||||||||||||||||||    
T  14617 gcatgttttgtcctcactcgcacacttaccgggaaacttcccggtaggtcacccatcccaaaattgctccaagtcaagca 14696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 46; Significance: 6e-17; HSPs: 34)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 289 - 479
Target Start/End: Complemental strand, 25147764 - 25147568
Alignment:
Q  289 tgttttgtcctcactcacacgcttttcgtgaaactttcctgaaggtcacccatcccaaaattgctccaagtcaagcatg-tta-------agttcttatg 380  Q
    |||||||| ||||||| ||||||| ||  ||||||| || | ||||||||||||||||||||||||||||||||||| | |||       ||||||||||    
T  25147764 tgttttgtactcactcgcacgcttatcaggaaacttcccggtaggtcacccatcccaaaattgctccaagtcaagcacgattaactatggagttcttatg 25147665  T
Q  381 atttcggctaccacaaagaatatgcatcttgtttgtatagttagtatcaaacaattgttataagcctcttctttcaaccatgatgtcccatacctacac 479  Q
       |  ||||||  |||||| ||||||||||||  ||||| ||| | ||||||||| ||||||||  |||| ||||||||||  ||| |||||||||||    
T  25147664 gaatgagctaccgaaaagaagatgcatcttgttgatataggtagcaccaaacaattcttataagc--cttccttcaaccatgcagtctcatacctacac 25147568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 289 - 365
Target Start/End: Original strand, 22548467 - 22548543
Alignment:
Q  289 tgttttgtcctcactcacacgcttttcgtgaaactttcctgaaggtcacccatcccaaaattgctccaagtcaagca 365  Q
    |||||||||||||||| |||||||   | ||||||| || | |||||||||||||||||||||||||||||||||||    
T  22548467 tgttttgtcctcactcgcacgcttactgggaaacttcccggtaggtcacccatcccaaaattgctccaagtcaagca 22548543  T

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Target: chr8; HSP #3
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 386 - 479
Target Start/End: Complemental strand, 2044181 - 2044090
Alignment:
Q  386 ggctaccacaaagaatatgcatcttgtttgtatagttagtatcaaacaattgttataagcctcttctttcaaccatgatgtcccatacctacac 479  Q
    |||||||| |||||| ||||||||||||  ||||| ||||||||||||||| ||||||||  |||| ||||||||||  ||| |||||||||||    
T  2044181 ggctaccaaaaagaaaatgcatcttgttgatataggtagtatcaaacaattcttataagc--cttccttcaaccatgtagtctcatacctacac 2044090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 289 - 475
Target Start/End: Original strand, 10844533 - 10844725
Alignment:
Q  289 tgttttgtcctcactcacacgcttttcgtgaaactttcctgaaggtcacccatcccaaaattgctccaagtcaagca--------tgttaagttcttatg 380  Q
    |||||||||||||||| || ||||  || ||||||| || | ||||||||||||||||||||||| |||||||||||        |||  ||||||||||    
T  10844533 tgttttgtcctcactcgcatgcttaccgagaaacttcccggtaggtcacccatcccaaaattgcttcaagtcaagcacgcttaactgtggagttcttatg 10844632  T
Q  381 atttcggctaccacaaagaatatgcatcttgtttgtatagttagtatcaaacaattgttataagcctcttctttcaaccatgatgtcccatacct 475  Q
       |  ||||||  |||||| ||||||||||||  ||||| ||||| ||||||| | ||||||||  |||| ||||||||||  |||||||||||    
T  10844633 gaatgagctaccgaaaagaagatgcatcttgttaatataggtagtaccaaacaactcttataagc--cttccttcaaccatgcagtcccatacct 10844725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 289 - 444
Target Start/End: Original strand, 33852176 - 33852339
Alignment:
Q  289 tgttttgtcctcactcacacgcttttcgtgaaactttcctgaaggtcacccatcccaaaattgctccaagtcaagca--------tgttaagttcttatg 380  Q
    |||||||||||||||| ||||||| || |||||||||||   ||||||||||||| || | | ||||||||||||||        ||| |||||||||||    
T  33852176 tgttttgtcctcactcgcacgcttatcatgaaactttccgataggtcacccatccaaagactactccaagtcaagcacgcttaattgtgaagttcttatg 33852275  T
Q  381 atttcggctaccacaaagaatatgcatcttgtttgtatagttagtatcaaacaattgttataag 444  Q
       | |||||||| |||||| || |||||||||  ||||| ||||| ||||||||| |||||||    
T  33852276 gaatgggctaccaaaaagaagatacatcttgttaatataggtagtaccaaacaattcttataag 33852339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 289 - 365
Target Start/End: Complemental strand, 17103310 - 17103233
Alignment:
Q  289 tgttttgtcctcactcacacgcttttcgtgaaactttcctgaaggtca-cccatcccaaaattgctccaagtcaagca 365  Q
    |||||||||||||||| |||||||  || ||||||| || | |||||| |||||||||||||||||||||||||||||    
T  17103310 tgttttgtcctcactcgcacgcttaccgggaaacttcccggtaggtcaacccatcccaaaattgctccaagtcaagca 17103233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 291 - 480
Target Start/End: Complemental strand, 22026605 - 22026410
Alignment:
Q  291 ttttgtcctcactcacacgcttttcgtgaaactttcctgaaggtcacccatcccaaaattgctccaagtcaagca--------tgttaagttcttatgat 382  Q
    |||||||||||||| |||||||  || ||||||| ||   |||| ||||||||||| ||||||||||||||||||        |||  ||||||||||      
T  22026605 ttttgtcctcactcgcacgcttaccgggaaacttcccgataggttacccatcccaatattgctccaagtcaagcacgcttaactgtggagttcttatgga 22026506  T
Q  383 ttcggctaccacaaagaatatgcatcttgtttgtatagttagtatcaaacaattgttataagcctcttctttcaaccatgatgtcccatacctacacg 480  Q
     |  ||||||  |||||| ||||||||||||  ||||| ||||| ||||||||| ||||||||  |||| ||||||||||  ||||||||||| ||||    
T  22026505 atgagctaccgaaaagaagatgcatcttgttgatataggtagtaccaaacaattcttataagc--cttcattcaaccatgcagtcccatacctgcacg 22026410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 289 - 478
Target Start/End: Original strand, 27022257 - 27022451
Alignment:
Q  289 tgttttgtcctcactcacacgcttttcgtgaaactttcctgaaggtcacccatcccaaaattgctccaagtcaagca--------tgttaagttcttatg 380  Q
    |||||||||||||||| |||||||  |   ||||||||| | |||||||||||||||||||||||||||||||||||        |||  ||||||||||    
T  27022257 tgttttgtcctcactcgcacgcttaccaa-aaactttccagtaggtcacccatcccaaaattgctccaagtcaagcacgcttaactgtggagttcttatg 27022355  T
Q  381 atttcggctaccacaaagaatatgcatcttgtttgtatagttagtatcaaacaattgttataagcctcttctttcaaccatgatgtcccatacctaca 478  Q
       |  ||| ||  ||| || |||||| |||||  ||||| ||||| ||||||||| ||||||||  |||||||||||||||  ||||||||||||||    
T  27022356 gaatgagctgccgaaaataagatgcatgttgttgatataggtagtaccaaacaattcttataagc--cttctttcaaccatgtagtcccatacctaca 27022451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 289 - 447
Target Start/End: Original strand, 34308397 - 34308563
Alignment:
Q  289 tgttttgtcctcactcacacgcttttcgtgaaactttcctgaaggtcacccatcccaaaattgctccaagtcaagca--------tgttaagttcttatg 380  Q
    ||||||||||||||||||| ||||  || ||||||| || | |||||||||||| ||||||||||||||| ||||||        |||  ||||||||||    
T  34308397 tgttttgtcctcactcacatgcttaccgggaaacttcccggtaggtcacccatctcaaaattgctccaagccaagcacgcttaagtgtggagttcttatg 34308496  T
Q  381 atttcggctaccacaaagaatatgcatcttgtttgtatagttagtatcaaacaattgttataagcct 447  Q
       | |||||||  |||||| ||||||||||||  ||||| ||||| |||||| || ||||||||||    
T  34308497 gaataggctaccgaaaagaagatgcatcttgttgatataggtagtaccaaacagttcttataagcct 34308563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 289 - 365
Target Start/End: Original strand, 10729604 - 10729680
Alignment:
Q  289 tgttttgtcctcactcacacgcttttcgtgaaactttcctgaaggtcacccatcccaaaattgctccaagtcaagca 365  Q
    ||||||||| |||||| |||||||||| |||||||||||  |||||||  ||||||||||||||| |||| ||||||    
T  10729604 tgttttgtcttcactcgcacgcttttcatgaaactttccataaggtcagtcatcccaaaattgcttcaagccaagca 10729680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 289 - 365
Target Start/End: Original strand, 22548913 - 22548989
Alignment:
Q  289 tgttttgtcctcactcacacgcttttcgtgaaactttcctgaaggtcacccatcccaaaattgctccaagtcaagca 365  Q
    |||||| ||||||||| |||||||   | ||||||| || | |||||||||||||||||||||||||||||||||||    
T  22548913 tgttttatcctcactcgcacgcttactgggaaacttcccggtaggtcacccatcccaaaattgctccaagtcaagca 22548989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 289 - 544
Target Start/End: Complemental strand, 25148194 - 25147937
Alignment:
Q  289 tgttttgtcctcactcacacgcttttcgtgaaactttcctgaaggtcacccatcccaaaattgctccaagtcaagca--------tgttaagttcttatg 380  Q
    ||||||| |||||||| |||| || ||| ||||||| || | |||||||||||||||||||||||| ||||||||||        |||  ||||||||||    
T  25148194 tgttttgacctcactcgcacgtttatcg-gaaacttcccggtaggtcacccatcccaaaattgctcaaagtcaagcacgcttaactgtggagttcttatg 25148096  T
Q  381 atttcggctaccacaaagaatatgcatcttgtttgtatagttagtatcaaacaattgttataagcctcttctttcaaccatgatgtcccatacctacacg 480  Q
       |  ||||||  |||||||||||||||||||  ||||| ||  | ||||||||| ||||||||  |||| |||||| |    ||||||||||||||||    
T  25148095 gaatgagctaccgaaaagaatatgcatcttgttgatataggtaagaccaaacaattcttataagc--cttccttcaacgacacagtcccatacctacacg 25147998  T
Q  481 tacaatatcaggatccctctcattcttatgtgaattcag-tttgcctagaagc-tgccagaagcca 544  Q
        |  || |||||||||||||||||||||| |||||| ||||||||||||| |||||| |||||    
T  25147997 ----acctcgggatccctctcattcttatgtg-attcagttttgcctagaagcatgccaggagcca 25147937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 289 - 365
Target Start/End: Original strand, 34308853 - 34308929
Alignment:
Q  289 tgttttgtcctcactcacacgcttttcgtgaaactttcctgaaggtcacccatcccaaaattgctccaagtcaagca 365  Q
    ||||||||||||||||||| ||||  || ||||||| || | |||||||||||| ||||||||||||||| ||||||    
T  34308853 tgttttgtcctcactcacatgcttaccgggaaacttcccggtaggtcacccatctcaaaattgctccaagccaagca 34308929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 289 - 480
Target Start/End: Original strand, 8080260 - 8080457
Alignment:
Q  289 tgttttgtcctcactcacacgcttttcgtgaaactttcctgaaggtcacccatcccaaaattgctccaagtcaagca--------tgttaagttcttatg 380  Q
    |||||||||||||||| |||||||  || ||||||| |  | |||| |||||||| || | | ||||||||||||||        ||| |||||||||||    
T  8080260 tgttttgtcctcactcgcacgcttaccgagaaacttcctagtaggttacccatccaaagactactccaagtcaagcacgcttaactgtgaagttcttatg 8080359  T
Q  381 atttcggctaccacaaagaatatgcatcttgtttgtatagttagtatcaaacaattgttataagcctcttctttcaaccatgatgtcccatacctacacg 480  Q
       | |||||||| |||||| ||||||||||||  ||||| ||||| ||||||||| |||| |||   ||| ||||||||||  ||||||||||||||||    
T  8080360 gaatgggctaccaaaaagaaaatgcatcttgttgatataggtagtaccaaacaattcttatcagc--tttccttcaaccatgtagtcccatacctacacg 8080457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 386 - 480
Target Start/End: Complemental strand, 28453461 - 28453369
Alignment:
Q  386 ggctaccacaaagaatatgcatcttgtttgtatagttagtatcaaacaattgttataagcctcttctttcaaccatgatgtcccatacctacacg 480  Q
    |||||||| |||||| ||||||||||||  ||||| |||||| |||||||| |||||||  | ||||||||||||||| ||| ||||||| ||||    
T  28453461 ggctaccataaagaagatgcatcttgttaatataggtagtataaaacaattcttataag--ttttctttcaaccatgaagtctcatacctgcacg 28453369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 371 - 480
Target Start/End: Complemental strand, 3744776 - 3744669
Alignment:
Q  371 agttcttatgatttcggctaccacaaagaatatgcatcttgtttgtatagttagtatcaaacaattgttataagcctcttctttcaaccatgatgtccca 470  Q
    |||||||||||  |  ||||||| ||||||  ||||| ||||| |||||| |||| |||||||||| |||||||  ||||| ||||||||||  ||||||    
T  3744776 agttcttatgaaatgtgctaccaaaaagaaggtgcatattgttggtataggtagtgtcaaacaattcttataag--tcttccttcaaccatgcagtccca 3744679  T
Q  471 tacctacacg 480  Q
    ||||||||||    
T  3744678 tacctacacg 3744669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 387 - 480
Target Start/End: Original strand, 6464934 - 6465025
Alignment:
Q  387 gctaccacaaagaatatgcatcttgtttgtatagttagtatcaaacaattgttataagcctcttctttcaaccatgatgtcccatacctacacg 480  Q
    ||||||| |||||| ||||||||||||  ||||| ||||| ||||||||| ||||||||  |||| ||||||||||  || |||||||||||||    
T  6464934 gctaccaaaaagaaaatgcatcttgttgatataggtagtaccaaacaattcttataagc--cttccttcaaccatgtagttccatacctacacg 6465025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 286 - 480
Target Start/End: Complemental strand, 27926129 - 27925930
Alignment:
Q  286 gcatgttttgtcctcactcacacgcttttcgtgaaactttcctgaaggtcacccatcccaaaattgctccaagtcaagca--------tgttaagttctt 377  Q
    ||||||||||||||||||| ||| |||  || ||||||| || | |  ||||||||||| ||||||||||||||||||||        |||  |||||||    
T  27926129 gcatgttttgtcctcactcgcacacttaccgggaaacttcccggtacctcacccatccc-aaattgctccaagtcaagcacgcttaactgtggagttctt 27926031  T
Q  378 atgatttcggctaccacaaagaatatgcatcttgtttgtatagttagtatcaaacaattgttataagcctcttctttcaaccatgatgtcccatacctac 477  Q
    ||||  |  ||||||  |||||| ||||||||||||  ||||| ||||| ||||||||| |||||| |  |||| ||||||||||  ||||||||||| |    
T  27926030 atgaaatgagctaccgaaaagaagatgcatcttgttgatataggtagtaccaaacaattcttataatc--cttccttcaaccatgcagtcccatacctgc 27925933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 297 - 478
Target Start/End: Original strand, 12827180 - 12827367
Alignment:
Q  297 cctcactcacacgcttttcgtgaaactttcctgaaggtcacccatcccaaaattgctccaagtcaagca--------tgttaagttcttatgatttcggc 388  Q
    |||||||| ||| |||  || ||||||| || | |||||||||||||||||||||||||||||||||||        |||  ||||||||||   |  ||    
T  12827180 cctcactcgcacacttaccgggaaacttcccggtaggtcacccatcccaaaattgctccaagtcaagcacgcttaactgtggagttcttatggaatgagc 12827279  T
Q  389 taccacaaagaatatgcatcttgtttgtatagttagtatcaaacaattgttataagcctcttctttcaaccatgatgtcccatacctaca 478  Q
    ||||  |||||| ||||||||||||  ||||| ||||| | ||||||| ||||||||  |||| |||||||| |  ||||||||||||||    
T  12827280 taccgaaaagaagatgcatcttgttgatataggtagtacccaacaattcttataagc--cttccttcaaccaagtagtcccatacctaca 12827367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 290 - 365
Target Start/End: Original strand, 31283571 - 31283645
Alignment:
Q  290 gttttgtcctcactcacacgcttttcgtgaaactttcctgaaggtcacccatcccaaaattgctccaagtcaagca 365  Q
    ||||||||||||||| |||||||  || ||||||| || | ||||||||||| |||||||||||| ||||||||||    
T  31283571 gttttgtcctcactcgcacgcttaccgggaaacttcccggtaggtcacccat-ccaaaattgctcaaagtcaagca 31283645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 289 - 480
Target Start/End: Original strand, 41659023 - 41659220
Alignment:
Q  289 tgttttgtcctcactcacacgcttttcgtgaaactttcctgaaggtcacccatcccaaaattgctccaagtcaagca--------tgttaagttcttatg 380  Q
    |||||||||||||||| ||| |||   | ||||||| || | |||||||| ||||||||||||||||||||||| ||        |||  ||||||||||    
T  41659023 tgttttgtcctcactcgcacacttacagggaaacttcccggtaggtcacctatcccaaaattgctccaagtcaaacacgcttaactgtggagttcttatg 41659122  T
Q  381 atttcggctaccacaaagaatatgcatcttgtttgtatagttagtatcaaacaattgttataagcctcttctttcaaccatgatgtcccatacctacacg 480  Q
       |  |||| |  |||||| ||||||||||||  ||||| ||||| ||||||||| |||||||  ||||| ||||||||||  ||||||||||| ||||    
T  41659123 taatgagctatcgaaaagaagatgcatcttgttgatataggtagtaccaaacaattcttataag--tcttccttcaaccatgcagtcccatacctgcacg 41659220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 332 - 365
Target Start/End: Complemental strand, 25144957 - 25144924
Alignment:
Q  332 ggtcacccatcccaaaattgctccaagtcaagca 365  Q
    ||||||||||||||||||||||||||||||||||    
T  25144957 ggtcacccatcccaaaattgctccaagtcaagca 25144924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 395 - 459
Target Start/End: Original strand, 30334940 - 30335002
Alignment:
Q  395 aaagaatatgcatcttgtttgtatagttagtatcaaacaattgttataagcctcttctttcaacc 459  Q
    |||||| ||| |||||||| |||||| ||||||||||||||| |||||||  |||||||||||||    
T  30334940 aaagaagatgtatcttgttggtataggtagtatcaaacaatttttataag--tcttctttcaacc 30335002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 289 - 365
Target Start/End: Complemental strand, 12100918 - 12100843
Alignment:
Q  289 tgttttgtcctcactcacacgcttttcgtgaaactttcctgaaggtcacccatcccaaaattgctccaagtcaagca 365  Q
    |||||||||||||||| |||||||     ||||||| || | ||||||||||||| |||||||||||||||||||||    
T  12100918 tgttttgtcctcactcgcacgcttacgaggaaacttcccggtaggtcacccatcc-aaaattgctccaagtcaagca 12100843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 289 - 365
Target Start/End: Complemental strand, 32292169 - 32292093
Alignment:
Q  289 tgttttgtcctcactcacacgcttttcgtgaaactttcctgaaggtcacccatcccaaaattgctccaagtcaagca 365  Q
    |||||||||||||||| |||||||  || ||||||| || | ||||||||||||| || | | ||||||||||||||    
T  32292169 tgttttgtcctcactcgcacgcttaccgggaaacttcccggtaggtcacccatccaaagactactccaagtcaagca 32292093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 286 - 365
Target Start/End: Complemental strand, 3745332 - 3745253
Alignment:
Q  286 gcatgttttgtcctcactcacacgcttttcgtgaaactttcctgaaggtcacccatcccaaaattgctccaagtcaagca 365  Q
    ||||||||| |  ||| |||||||||||| | |||||||  | || ||||| ||||||||||||||||| ||||||||||    
T  3745332 gcatgttttattatcattcacacgctttttgagaaacttctcagatggtcagccatcccaaaattgctctaagtcaagca 3745253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 329 - 363
Target Start/End: Complemental strand, 6466894 - 6466860
Alignment:
Q  329 gaaggtcacccatcccaaaattgctccaagtcaag 363  Q
    ||||||||||||| |||||||||||||||||||||    
T  6466894 gaaggtcacccataccaaaattgctccaagtcaag 6466860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 395 - 480
Target Start/End: Complemental strand, 10844997 - 10844914
Alignment:
Q  395 aaagaatatgcatcttgtttgtatagttagtatcaaacaattgttataagcctcttctttcaaccatgatgtcccatacctacacg 480  Q
    |||||| ||||||||||||  ||||| ||||| ||||||||| ||||||||   ||| ||||||||||  ||||||||||| ||||    
T  10844997 aaagaagatgcatcttgttgatataggtagtaccaaacaattcttataagc--tttccttcaaccatgcagtcccatacctgcacg 10844914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 386 - 475
Target Start/End: Complemental strand, 41913093 - 41913006
Alignment:
Q  386 ggctaccacaaagaatatgcatcttgtttgtatagttagtatcaaacaattgttataagcctcttctttcaaccatgatgtcccatacct 475  Q
    |||||||| |||||| | ||||||||||  ||||| ||| | ||||||||| ||||||||||  |||||||| ||||  |||||||||||    
T  41913093 ggctaccaaaaagaagacgcatcttgttgatataggtagcaccaaacaattcttataagcct--tctttcaaacatgcagtcccatacct 41913006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 292 - 365
Target Start/End: Original strand, 15818937 - 15819010
Alignment:
Q  292 tttgtcctcactcacacgcttttcgtgaaactttcctgaaggtcacccatcccaaaattgctccaagtcaagca 365  Q
    ||||||||||||| ||| ||||||| ||||||| || ||||||| ||||||| ||   | ||||||||||||||    
T  15818937 tttgtcctcactcgcacacttttcgggaaacttcccagaaggtcgcccatccaaagcctactccaagtcaagca 15819010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 387 - 475
Target Start/End: Original strand, 22549019 - 22549105
Alignment:
Q  387 gctaccacaaagaatatgcatcttgtttgtatagttagtatcaaacaattgttataagcctcttctttcaaccatgatgtcccatacct 475  Q
    ||||||  |||||| ||||||||||||  ||||| ||||| ||||||||| |||||||  ||||| ||||||||||  ||| |||||||    
T  22549019 gctaccgaaaagaagatgcatcttgttgatataggtagtaccaaacaattcttataag--tcttccttcaaccatgcagtcacatacct 22549105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 289 - 365
Target Start/End: Original strand, 21316028 - 21316103
Alignment:
Q  289 tgttttgtcctcactcacacgcttttcgtgaaactttcctgaaggtcacccatcccaaaattgctccaagtcaagca 365  Q
    |||||||||||||||| |||||||  || |||||||  | | ||||||||| | |||||||| ||||||||||||||    
T  21316028 tgttttgtcctcactcgcacgcttaccg-gaaacttcgcggtaggtcacccttaccaaaattactccaagtcaagca 21316103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 395 - 478
Target Start/End: Original strand, 22840561 - 22840642
Alignment:
Q  395 aaagaatatgcatcttgtttgtatagttagtatcaaacaattgttataagcctcttctttcaaccatgatgtcccatacctaca 478  Q
    |||||| ||||||||||||  ||||| ||||| ||||||||| |||||||  ||||| ||| ||||||  ||| ||||||||||    
T  22840561 aaagaagatgcatcttgttgatatagatagtaccaaacaattcttataag--tcttcattcgaccatgtagtctcatacctaca 22840642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 289 - 365
Target Start/End: Complemental strand, 32292625 - 32292549
Alignment:
Q  289 tgttttgtcctcactcacacgcttttcgtgaaactttcctgaaggtcacccatcccaaaattgctccaagtcaagca 365  Q
    ||||||||||||||||||||||||  ||  |||||| || | || |||||||||| || | | ||||||||||||||    
T  32292625 tgttttgtcctcactcacacgcttaccggaaaacttcccggtagatcacccatccaaagactactccaagtcaagca 32292549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 43; Significance: 0.000000000000004; HSPs: 4)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 289 - 532
Target Start/End: Original strand, 162596 - 162841
Alignment:
Q  289 tgttttgtcctcactcacacgcttttcgtgaaactttcctgaaggtcacccatcccaaaattgctccaagtcaagcatg-tta-------agttcttatg 380  Q
    |||||||||||||||| ||||||| ||| ||||||| |  | ||||||| ||||||||| ||||||||||||||||| | |||       ||||||||||    
T  162596 tgttttgtcctcactcgcacgcttatcgcgaaacttccaggtaggtcactcatcccaaagttgctccaagtcaagcacgcttaactgcggagttcttatg 162695  T
Q  381 atttcggctaccacaaagaatatgcatcttgtttgtatagttagtatcaaacaattgttataagcctcttctttcaaccatgatgtcccatacctacacg 480  Q
       |  ||||||  |||||| ||||||||||||  ||||| ||||| ||||||||| |||||||  ||||| ||||||||||  ||| |||||||    |    
T  162696 gaatgagctaccgaaaagaagatgcatcttgttaatataggtagtaccaaacaattcttataag--tcttccttcaaccatgcagtcacatacct----g 162789  T
Q  481 tacaatatcaggatccctctcattcttatgtgaattcag-tttgcctagaagc 532  Q
    |||    ||||||||||||||||||  |||| ||||||| |||||||||||||    
T  162790 tacggcctcaggatccctctcattccgatgt-aattcagttttgcctagaagc 162841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #2
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 289 - 365
Target Start/End: Original strand, 163052 - 163128
Alignment:
Q  289 tgttttgtcctcactcacacgcttttcgtgaaactttcctgaaggtcacccatcccaaaattgctccaagtcaagca 365  Q
    ||||||||||||||||  ||||||  || ||||||| ||   |||||||||||||||||||||||||||||||||||    
T  163052 tgttttgtcctcactcgaacgcttaccgagaaacttcccgataggtcacccatcccaaaattgctccaagtcaagca 163128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #3
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 289 - 365
Target Start/End: Complemental strand, 163299 - 163223
Alignment:
Q  289 tgttttgtcctcactcacacgcttttcgtgaaactttcctgaaggtcacccatcccaaaattgctccaagtcaagca 365  Q
    |||||||||||||||| |||||||   | |||||||  | | |||||||||||||||||||||||||||||||||||    
T  163299 tgttttgtcctcactcgcacgcttactgggaaacttctcggtaggtcacccatcccaaaattgctccaagtcaagca 163223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #4
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 292 - 364
Target Start/End: Original strand, 69736 - 69808
Alignment:
Q  292 tttgtcctcactcacacgcttttcgtgaaactttcctgaaggtcacccatcccaaaattgctccaagtcaagc 364  Q
    |||||| ||||||||||||||| |   |||||| |||||||||||||||||| || | | |||| ||||||||    
T  69736 tttgtcatcactcacacgctttcccataaacttccctgaaggtcacccatccaaagactactcctagtcaagc 69808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0047 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 2)
Name: scaffold0047
Description:

Target: scaffold0047; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 289 - 511
Target Start/End: Original strand, 17516 - 17740
Alignment:
Q  289 tgttttgtcctcactcacacgcttttcgtgaaactttcctgaaggtcacccatcccaaaattgctccaagtcaagca--------tgttaagttcttatg 380  Q
    |||||||||||||||| |||||||  ||  ||||||||  | ||||||||||||| || | | ||||||||||||||        |||  ||||||||||    
T  17516 tgttttgtcctcactcgcacgcttaccgaaaaactttcgagtaggtcacccatccaaagagtactccaagtcaagcacgcttaactgtggagttcttatg 17615  T
Q  381 atttcggctaccacaaagaatatgcatcttgtttgtatagttagtatcaaacaattgttataagcctcttctttcaaccatgatgtcccatacctacacg 480  Q
    | ||  ||||||| |||||| || |||| ||||  ||||| ||||| ||||||||| ||||||||   ||| ||||||||||  ||||||||||||||||    
T  17616 aattgagctaccaaaaagaagatacatcctgttgatataggtagtaccaaacaattcttataagc--tttccttcaaccatgtagtcccatacctacacg 17713  T
Q  481 tacaatatcaggatccctctcattcttatgt 511  Q
      |    ||||||||||||||||||| ||||    
T  17714 gcc----tcaggatccctctcattctgatgt 17740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0047; HSP #2
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 402 - 534
Target Start/End: Original strand, 18173 - 18298
Alignment:
Q  402 atgcatcttgtttgtatagttagtatcaaacaattgttataagcctcttctttcaaccatgatgtcccatacctacacgtacaatatcaggatccctctc 501  Q
    ||||||||||||  ||||| ||||||||||||||| |||||||  ||||| |||||| |||  ||| ||||||||||||  |    ||||||||||||||    
T  18173 atgcatcttgttgatataggtagtatcaaacaattcttataag--tcttccttcaactatgtagtcacatacctacacggcc----tcaggatccctctc 18266  T
Q  502 attcttatgtgaattcagtttgcctagaagctg 534  Q
    ||||  ||||| ||||||||   ||||||||||    
T  18267 attccgatgtg-attcagttcctctagaagctg 18298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0071 (Bit Score: 38; Significance: 0.000000000003; HSPs: 1)
Name: scaffold0071
Description:

Target: scaffold0071; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 292 - 365
Target Start/End: Original strand, 44642 - 44715
Alignment:
Q  292 tttgtcctcactcacacgcttttcgtgaaactttcctgaaggtcacccatcccaaaattgctccaagtcaagca 365  Q
    ||||||||||||  ||| ||||| |  |||||| || ||||||||||||||||||||||| |||||||||||||    
T  44642 tttgtcctcacttgcacacttttaggaaaacttcccagaaggtcacccatcccaaaattgatccaagtcaagca 44715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0389 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0389
Description:

Target: scaffold0389; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 289 - 365
Target Start/End: Original strand, 13451 - 13527
Alignment:
Q  289 tgttttgtcctcactcacacgcttttcgtgaaactttcctgaaggtcacccatcccaaaattgctccaagtcaagca 365  Q
    |||||||||||||||| |||||||     ||||||| || | |||||||||||||||||||||||| ||||||||||    
T  13451 tgttttgtcctcactcgcacgcttacaaagaaacttcccggtaggtcacccatcccaaaattgctcaaagtcaagca 13527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 289 - 365
Target Start/End: Complemental strand, 105948 - 105872
Alignment:
Q  289 tgttttgtcctcactcacacgcttttcgtgaaactttcctgaaggtcacccatcccaaaattgctccaagtcaagca 365  Q
    |||||||||||||||| |||||||  |  |||||||  | | ||||||| |||||||||||||||||||||||||||    
T  105948 tgttttgtcctcactcgcacgcttaccaggaaacttctcggtaggtcacacatcccaaaattgctccaagtcaagca 105872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 289 - 365
Target Start/End: Complemental strand, 10527 - 10452
Alignment:
Q  289 tgttttgtcctcactcacacgcttttcgtgaaactttcctgaaggtcacccatcccaaaattgctccaagtcaagca 365  Q
    |||||||||||||||| |||||||  |  ||||||| || | ||||||||||||| |||||||||||||||||||||    
T  10527 tgttttgtcctcactcgcacgcttaccaggaaacttcccggtaggtcacccatcc-aaaattgctccaagtcaagca 10452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 37; Significance: 0.00000000001; HSPs: 2)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 289 - 365
Target Start/End: Complemental strand, 154985 - 154909
Alignment:
Q  289 tgttttgtcctcactcacacgcttttcgtgaaactttcctgaaggtcacccatcccaaaattgctccaagtcaagca 365  Q
    |||||||||||||||  ||| |||  || ||||||| || | ||||||||||| |||||||||||||||||||||||    
T  154985 tgttttgtcctcactagcacacttaccgagaaacttcccggtaggtcacccattccaaaattgctccaagtcaagca 154909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002; HSP #2
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 395 - 478
Target Start/End: Complemental strand, 154871 - 154790
Alignment:
Q  395 aaagaatatgcatcttgtttgtatagttagtatcaaacaattgttataagcctcttctttcaaccatgatgtcccatacctaca 478  Q
    |||||| ||||||||||||  || || ||||| | ||||||| ||||||||  |||| ||||||||||  ||||||||||||||    
T  154871 aaagaagatgcatcttgttgatacaggtagtacccaacaattcttataagc--cttccttcaaccatgtagtcccatacctaca 154790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0557 (Bit Score: 34; Significance: 0.0000000008; HSPs: 1)
Name: scaffold0557
Description:

Target: scaffold0557; HSP #1
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 386 - 447
Target Start/End: Complemental strand, 2228 - 2167
Alignment:
Q  386 ggctaccacaaagaatatgcatcttgtttgtatagttagtatcaaacaattgttataagcct 447  Q
    |||||||| |||||| ||||||||||||| |||||  |||| ||||||||| ||||||||||    
T  2228 ggctaccaaaaagaagatgcatcttgtttatatagggagtaccaaacaattcttataagcct 2167  T

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Target: scaffold0333 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0333
Description:

Target: scaffold0333; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 289 - 365
Target Start/End: Complemental strand, 4788 - 4713
Alignment:
Q  289 tgttttgtcctcactcacacgcttttcgtgaaactttcctgaaggtcacccatcccaaaattgctccaagtcaagca 365  Q
    |||||||||||||||| ||| |||  || ||||||| || | |||||||||||||| |||||||||||||| |||||    
T  4788 tgttttgtcctcactcgcacacttaccgggaaacttcccggtaggtcacccatccc-aaattgctccaagttaagca 4713  T

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Target: scaffold0088 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0088
Description:

Target: scaffold0088; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 397 - 480
Target Start/End: Complemental strand, 23785 - 23704
Alignment:
Q  397 agaatatgcatcttgtttgtatagttagtatcaaacaattgttataagcctcttctttcaaccatgatgtcccatacctacacg 480  Q
    |||| ||||||||||||  ||||| ||||| ||||||||| ||||||||  |||| ||||||||||  ||||||||||| ||||    
T  23785 agaagatgcatcttgttgatataggtagtaccaaacaattcttataagc--cttccttcaaccatgcagtcccatacctgcacg 23704  T

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Target: scaffold0007 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 395 - 522
Target Start/End: Original strand, 142306 - 142426
Alignment:
Q  395 aaagaatatgcatcttgtttgtatagttagtatcaaacaattgttataagcctcttctttcaaccatgatgtcccatacctacacgtacaatatcaggat 494  Q
    |||||| ||||||||||||  ||||| ||||| ||||||||| |||||| |   ||| ||||||||||| ||||||||||| ||||  |    |||||||    
T  142306 aaagaagatgcatcttgttgatataggtagtaccaaacaattcttataaac--attccttcaaccatgaagtcccatacctgcacggcc----tcaggat 142399  T
Q  495 ccctctcattcttatgtgaattcagttt 522  Q
    |||||||||||  ||||| |||||||||    
T  142400 ccctctcattccgatgtg-attcagttt 142426  T

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