View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15978_high_67 (Length: 253)
Name: NF15978_high_67
Description: NF15978
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15978_high_67 |
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Alignment Details
Target: chr7 (Bit Score: 223; Significance: 1e-123; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 223; E-Value: 1e-123
Query Start/End: Original strand, 1 - 244
Target Start/End: Complemental strand, 34889687 - 34889444
Alignment:
| Q |
1 |
gtgatgtcgtatttaaccttggggtnnnnnnncaaaacaacaataattgaaggagcacaactagccagcaggtaagagttttggaattaatgttgttcag |
100 |
Q |
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||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
34889687 |
gtgatgtcgtatttaaccttggggtaaaaaaacaaaacaacaataattgaaggagcacaactagccagcaggtaagagttttggaattaatgttgttcag |
34889588 |
T |
|
| Q |
101 |
tacaaagtacatatgcaagatcaccatgctatgatgaaaaaccacagggccttttatatgcaatccaatccttttgtacgacatatattatgcttgtttg |
200 |
Q |
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|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
34889587 |
tacaaagtacatatgcaagatcaccatgctatgatgaaaaaccacagggccttttatatgcaatccaatccttttgtacgacatatattatgcttgtttg |
34889488 |
T |
|
| Q |
201 |
ttttgttgcatgctttgaagtttgatgtttgtacctttgctact |
244 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||| |
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|
| T |
34889487 |
ttttgttgcatgctttgaagtttgatgtttgtacctttgctact |
34889444 |
T |
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