View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15978_high_96 (Length: 202)
Name: NF15978_high_96
Description: NF15978
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15978_high_96 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 169; Significance: 8e-91; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 169; E-Value: 8e-91
Query Start/End: Original strand, 9 - 202
Target Start/End: Original strand, 38632633 - 38632826
Alignment:
| Q |
9 |
aatatgatagcaaaagtcagttattttatcagacgagggaacagcatattcagcctttgtttttcctcttgaatgacaaataacatgacaaaaagaatga |
108 |
Q |
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| T |
38632633 |
aatatgatagcaaaagtcagttattttatcagacgaggaaacagcatattcagcctttgtttttcctcttgaatgacaaataacatgacaaaaagaatga |
38632732 |
T |
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| Q |
109 |
ttcaagcacatnnnnnnngacacgacgtactcagcttgagagtaatcagtaatggcttgattcgaccaacaagaacaagtaccacaggtttttt |
202 |
Q |
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| T |
38632733 |
ttcaagcacatcaaaaaagacacgacgtactcagcttgagagtaatcagtaatggcttgattcgaccaacaagaacaagtaccacaggtttttt |
38632826 |
T |
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