View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15978_low_56 (Length: 273)
Name: NF15978_low_56
Description: NF15978
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15978_low_56 |
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Alignment Details
Target: chr4 (Bit Score: 239; Significance: 1e-132; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 239; E-Value: 1e-132
Query Start/End: Original strand, 19 - 261
Target Start/End: Complemental strand, 33948176 - 33947934
Alignment:
| Q |
19 |
tgtttgtggaaccaaattccaaaccaaacagttgctatggtggaaatggaaaatgggtgtcggttggaatgtgaaggggtgattatatagagaagggaag |
118 |
Q |
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| T |
33948176 |
tgtttgtggaaccaaattccaaaccaaacagttgctatggtggaaatggaaaatgggtgtcggttggaatgtgaaggggtgattatatagagaagggaag |
33948077 |
T |
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| Q |
119 |
tggggaaggatagaggaaagaggggggtatgagtgggaaagattgacttttgagtgaaggactagactggtttttagaaggagcagcctttactagacta |
218 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
33948076 |
tggggaaggatagaggaaagaggggggtatgagtgggaaagattgacttttgagtgaaggactagactggtttttagaaggagcagcctttactagacta |
33947977 |
T |
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| Q |
219 |
ccaattgttttccttgctatcattaattatagtatattcttgg |
261 |
Q |
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| T |
33947976 |
ccaattgttttccttgctatcattaattatagtattttcttgg |
33947934 |
T |
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