View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15978_low_62 (Length: 267)
Name: NF15978_low_62
Description: NF15978
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15978_low_62 |
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Alignment Details
Target: chr4 (Bit Score: 199; Significance: 1e-108; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 199; E-Value: 1e-108
Query Start/End: Original strand, 9 - 215
Target Start/End: Original strand, 53173644 - 53173850
Alignment:
| Q |
9 |
agcaaaggcaagtctctttaactgtgttatatcatattctccttcaagccttgcatctactagctcttctatatcacctttgttcaaaattggtttagcc |
108 |
Q |
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| T |
53173644 |
agcaaaggcaagtctctttaactgtgttacatcatattctccttcaagccttgcatctactagctcttctatatcacctttgttcaaaattggtttagcc |
53173743 |
T |
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| Q |
109 |
tactcattcaaaagatgaaattatcaacaaggctcatacaaaatcatcaaacaaagttattaaacatcaatgtaaaaatcatcatccaaatggtctgtgc |
208 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |
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| T |
53173744 |
tactcattcaaaagatgaaattatcaacaaggctcatacaaaatcatcaaacaaagttattaaacatcaatgtaaaaatcatcatccaaatggtttgtgc |
53173843 |
T |
|
| Q |
209 |
attcaca |
215 |
Q |
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||||||| |
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| T |
53173844 |
attcaca |
53173850 |
T |
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