View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15978_low_70 (Length: 252)
Name: NF15978_low_70
Description: NF15978
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15978_low_70 |
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Alignment Details
Target: chr8 (Bit Score: 202; Significance: 1e-110; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 202; E-Value: 1e-110
Query Start/End: Original strand, 18 - 239
Target Start/End: Original strand, 10581404 - 10581625
Alignment:
| Q |
18 |
cattattattaaccaacaattgataaccaaatttgtggatgaaatttgattgattaagcttacatttctgaacaatggccccttagctctttggttacga |
117 |
Q |
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| T |
10581404 |
cattattattaaccaacaattggtaaccaaatttgtggatgaaatttgattgattaagcttacatttctgaacaatggccccttagatctttggttacga |
10581503 |
T |
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| Q |
118 |
aattgttgtatgtgtgaccatattgtacaacaatatagagaacaatgtcctttttattatataaaaaggagctttttagtatataaaaagcagcctccta |
217 |
Q |
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|||||||||| ||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
10581504 |
aattgttgtacgtgtgaccatattgtacaacaatatagagaataacgtcctttttattatataaaaaggagctttttagtatataaaaagcagcctccta |
10581603 |
T |
|
| Q |
218 |
taaaacatcaaattcaagagta |
239 |
Q |
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|||||||||||||||||||||| |
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| T |
10581604 |
taaaacatcaaattcaagagta |
10581625 |
T |
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