View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15980_high_4 (Length: 260)
Name: NF15980_high_4
Description: NF15980
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15980_high_4 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 248; Significance: 1e-138; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 248; E-Value: 1e-138
Query Start/End: Original strand, 1 - 260
Target Start/End: Original strand, 47053714 - 47053973
Alignment:
| Q |
1 |
gccaagctggaagagcacacactcttctctaagaagaaactaaaccctaatagagcttagggaacttagacgacgctgagttatgaaattctaagtttct |
100 |
Q |
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| T |
47053714 |
gccaagctggaagagcacacactcttctctaagaagaaactaaaccctaacagagcttagggaacttagacgacgctgagttatgaaattctaagtttct |
47053813 |
T |
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| Q |
101 |
aaccaatgttatcttctgagaaacaatcactaagctttctccaaacattggcagcttcatcagtctacaaaatgcttgtggcagcgctagctgacatgca |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |
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| T |
47053814 |
aaccaatgttatcttctgagaaacaatcactaagctttctccaaacattggcagcttcatcagtctacaaaatgcttgtggcagcgctagctgacacgca |
47053913 |
T |
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| Q |
201 |
atgaccgactcacaaaagcaccaacaggtttcatcttttccatttgtccgaggtagaggc |
260 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |
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| T |
47053914 |
atgaccgactcacaaaagcaccaacaggtttcatcttttccatttgtccaaggtagaggc |
47053973 |
T |
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