View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF15980_high_5 (Length: 260)
Name: NF15980_high_5
Description: NF15980
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15980_high_5 |
 |  |
|
Alignment Details
Target: chr8 (Bit Score: 179; Significance: 1e-96; HSPs: 5)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 179; E-Value: 1e-96
Query Start/End: Original strand, 1 - 183
Target Start/End: Original strand, 13410179 - 13410361
Alignment:
| Q |
1 |
ttttaagagagcatatagaaacaaacaaacaacatatgacatatttataagttgtttttaacttatttctgtaagctcttcagtatagcttatatgaaag |
100 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
13410179 |
ttttaagagagcatatagaaacaaacaaacaacatatgacatatttataagttgtttttaacttatttctgtaagctcttcagtatagcttatatgaaaa |
13410278 |
T |
 |
| Q |
101 |
tagtttaacattattttaacttttgttgtaaaagtagtttatacataatggattaattaagttgtttatccaaacaagaccat |
183 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
13410279 |
tagtttaacattattttaacttttgttgtaaaagtagtttatacataatggattaattaagttgtttatccaaacaagaccat |
13410361 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 27 - 90
Target Start/End: Complemental strand, 8629185 - 8629122
Alignment:
| Q |
27 |
aaacaacatatgacatatttataagttgtttttaacttatttctgtaagctcttcagtatagct |
90 |
Q |
| |
|
||||||| ||| | ||||| |||||||||||||||||||||||| ||||||| || ||||||| |
|
|
| T |
8629185 |
aaacaacttataaaatattcataagttgtttttaacttatttctacaagctctccaatatagct |
8629122 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 84 - 130
Target Start/End: Original strand, 35453690 - 35453736
Alignment:
| Q |
84 |
tatagcttatatgaaagtagtttaacattattttaacttttgttgta |
130 |
Q |
| |
|
|||| ||||||||||| ||||||||| |||||||| ||||||||||| |
|
|
| T |
35453690 |
tataacttatatgaaactagtttaactttattttatcttttgttgta |
35453736 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 154 - 183
Target Start/End: Complemental strand, 4558701 - 4558672
Alignment:
| Q |
154 |
taattaagttgtttatccaaacaagaccat |
183 |
Q |
| |
|
|||||||||||||||||||||||||||||| |
|
|
| T |
4558701 |
taattaagttgtttatccaaacaagaccat |
4558672 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #5
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 92 - 176
Target Start/End: Original strand, 12224974 - 12225058
Alignment:
| Q |
92 |
atatgaaagtagtttaacattattttaacttttgttgtaaaagtagtttatacataatggattaattaagttgtttatccaaaca |
176 |
Q |
| |
|
|||||||| |||||| || |||||||| ||||||| || || || |||||||||| |||||||||||||||||||||||| |
|
|
| T |
12224974 |
atatgaaaatagtttgactttattttatcttttgtcttagaaataacttatacataagctcttaattaagttgtttatccaaaca |
12225058 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 82; Significance: 8e-39; HSPs: 7)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 158 - 247
Target Start/End: Complemental strand, 39621882 - 39621793
Alignment:
| Q |
158 |
taagttgtttatccaaacaagaccatcagaaaatcatccagttaagaaccttcaagtgttaaatgttacaaagccaataataattcacct |
247 |
Q |
| |
|
||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
39621882 |
taagttgtttatccaaacaagaccatcagaaaagcatccagataagaaccttcaagtgttaaatgttacaaagccaataataattcacct |
39621793 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 84 - 148
Target Start/End: Original strand, 18962105 - 18962169
Alignment:
| Q |
84 |
tatagcttatatgaaagtagtttaacattattttaacttttgttgtaaaagtagtttatacataa |
148 |
Q |
| |
|
|||||||||||||||| |||||||| |||||||| |||||||| ||||| ||| | |||||||| |
|
|
| T |
18962105 |
tatagcttatatgaaaacagtttaactttattttatcttttgttataaaaatagctaatacataa |
18962169 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 84 - 148
Target Start/End: Complemental strand, 28902080 - 28902016
Alignment:
| Q |
84 |
tatagcttatatgaaagtagtttaacattattttaacttttgttgtaaaagtagtttatacataa |
148 |
Q |
| |
|
|||||||||||||||| ||||||| |||||||||||| |||| ||||| ||| |||||||||| |
|
|
| T |
28902080 |
tatagcttatatgaaaacagtttaattttattttaacttatgttataaaaatagcttatacataa |
28902016 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 38 - 148
Target Start/End: Complemental strand, 37034091 - 37033983
Alignment:
| Q |
38 |
gacatatttataagttgtttttaacttatttctgtaagctcttcagtatagcttatatgaaagtagtttaacattattttaacttttgttgtaaaagtag |
137 |
Q |
| |
|
||||| ||||||| ||||||| ||||||||||| |||||||| || ||| || ||||||| | |||| || |||||||| ||||| || || || ||| |
|
|
| T |
37034091 |
gacatgtttataaattgttttcaacttatttctataagctctccataatatct--tatgaaaatcgtttgactttattttatctttttttatagaaatag |
37033994 |
T |
 |
| Q |
138 |
tttatacataa |
148 |
Q |
| |
|
||||||||||| |
|
|
| T |
37033993 |
tttatacataa |
37033983 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #5
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 28 - 93
Target Start/End: Original strand, 1939323 - 1939388
Alignment:
| Q |
28 |
aacaacatatgacatatttataagttgtttttaacttatttctgtaagctcttcagtatagcttat |
93 |
Q |
| |
|
|||||| |||||||| | ||||| |||||| |||||||||| |||||||| ||||||||||||| |
|
|
| T |
1939323 |
aacaacttatgacatgtccataagctgttttcaacttatttccataagctctccagtatagcttat |
1939388 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #6
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 85 - 130
Target Start/End: Original strand, 37292415 - 37292460
Alignment:
| Q |
85 |
atagcttatatgaaagtagtttaacattattttaacttttgttgta |
130 |
Q |
| |
|
||||||||||||||| |||||| || |||||||| ||||||||||| |
|
|
| T |
37292415 |
atagcttatatgaaaatagttttactttattttatcttttgttgta |
37292460 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #7
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 35 - 79
Target Start/End: Complemental strand, 16867811 - 16867767
Alignment:
| Q |
35 |
tatgacatatttataagttgtttttaacttatttctgtaagctct |
79 |
Q |
| |
|
||||||||||| |||||||||||| |||||||||| |||||||| |
|
|
| T |
16867811 |
tatgacatattcataagttgttttcaacttatttccataagctct |
16867767 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 33; Significance: 0.000000001; HSPs: 3)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 84 - 148
Target Start/End: Original strand, 30338659 - 30338723
Alignment:
| Q |
84 |
tatagcttatatgaaagtagtttaacattattttaacttttgttgtaaaagtagtttatacataa |
148 |
Q |
| |
|
|||||||||||||||| |||||||| ||||| || |||||||| || || |||||||||||||| |
|
|
| T |
30338659 |
tatagcttatatgaaaacagtttaactttattctatcttttgttatagaaatagtttatacataa |
30338723 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 111 - 148
Target Start/End: Original strand, 32066503 - 32066540
Alignment:
| Q |
111 |
ttattttaacttttgttgtaaaagtagtttatacataa |
148 |
Q |
| |
|
|||||||| |||||||| |||||||||||||||||||| |
|
|
| T |
32066503 |
ttattttatcttttgttataaaagtagtttatacataa |
32066540 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 35 - 127
Target Start/End: Complemental strand, 35743354 - 35743264
Alignment:
| Q |
35 |
tatgacatatttataagttgtttttaacttatttctgtaagctcttcagtatagcttatatgaaagtagtttaacattattttaacttttgtt |
127 |
Q |
| |
|
|||||||| |||||||||||||| |||||||||| ||| ||||||| |||| | |||||||||||||| | |||||||| |||||||| |
|
|
| T |
35743354 |
tatgacatgtttataagttgtttccaacttatttccataaactcttcatgatag--tttatgaaagtagtttgcctttattttatcttttgtt |
35743264 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 33; Significance: 0.000000001; HSPs: 2)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 35 - 127
Target Start/End: Original strand, 49586934 - 49587026
Alignment:
| Q |
35 |
tatgacatatttataagttgtttttaacttatttctgtaagctcttcagtatagcttatatgaaagtagtttaacattattttaacttttgtt |
127 |
Q |
| |
|
|||||||||| |||||||||||| | |||||||| ||| |||| || ||||||||||||||| ||||| || |||||||| |||||||| |
|
|
| T |
49586934 |
tatgacatatccataagttgttttcagtttatttctttaatctctccaagatagcttatatgaaaacagtttgactttattttatcttttgtt |
49587026 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 84 - 146
Target Start/End: Original strand, 25183055 - 25183117
Alignment:
| Q |
84 |
tatagcttatatgaaagtagtttaacattattttaacttttgttgtaaaagtagtttatacat |
146 |
Q |
| |
|
||||||| |||||||| ||| ||||| |||||| | |||||||| ||||| |||||||||||| |
|
|
| T |
25183055 |
tatagctcatatgaaaatagcttaactttatttaatcttttgttataaaaatagtttatacat |
25183117 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 32; Significance: 0.000000006; HSPs: 6)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 84 - 127
Target Start/End: Complemental strand, 1402999 - 1402956
Alignment:
| Q |
84 |
tatagcttatatgaaagtagtttaacattattttaacttttgtt |
127 |
Q |
| |
|
|||||||||||||||| ||||||||| |||||||| |||||||| |
|
|
| T |
1402999 |
tatagcttatatgaaaatagtttaactttattttatcttttgtt |
1402956 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 87 - 148
Target Start/End: Original strand, 2034509 - 2034569
Alignment:
| Q |
87 |
agcttatatgaaagtagtttaacattattttaacttttgttgtaaaagtagtttatacataa |
148 |
Q |
| |
|
|||||||||||||||||||| || |||||||| | |||||||||||| || |||||||||| |
|
|
| T |
2034509 |
agcttatatgaaagtagtttgactttattttatc-tttgttgtaaaaacagcttatacataa |
2034569 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 87 - 148
Target Start/End: Complemental strand, 7714025 - 7713964
Alignment:
| Q |
87 |
agcttatatgaaagtagtttaacattattttaacttttgttgtaaaagtagtttatacataa |
148 |
Q |
| |
|
||||||||||||| | ||| || |||||||| |||||||| | |||||||||||||||||| |
|
|
| T |
7714025 |
agcttatatgaaaacaatttgactttattttatcttttgttatgaaagtagtttatacataa |
7713964 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 27 - 68
Target Start/End: Original strand, 33832263 - 33832304
Alignment:
| Q |
27 |
aaacaacatatgacatatttataagttgtttttaacttattt |
68 |
Q |
| |
|
||||||| |||||||| ||||||||||||||||| ||||||| |
|
|
| T |
33832263 |
aaacaacttatgacatgtttataagttgtttttagcttattt |
33832304 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 84 - 148
Target Start/End: Original strand, 30522507 - 30522571
Alignment:
| Q |
84 |
tatagcttatatgaaagtagtttaacattattttaacttttgttgtaaaagtagtttatacataa |
148 |
Q |
| |
|
|||||||||||||||| |||||| || ||||||||| ||||||| | ||||| |||||||||| |
|
|
| T |
30522507 |
tatagcttatatgaaaatagtttcactttattttaaattttgttttggaagtatcttatacataa |
30522571 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #6
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 153 - 181
Target Start/End: Complemental strand, 34404342 - 34404314
Alignment:
| Q |
153 |
ttaattaagttgtttatccaaacaagacc |
181 |
Q |
| |
|
||||||||||||||||||||||||||||| |
|
|
| T |
34404342 |
ttaattaagttgtttatccaaacaagacc |
34404314 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 32; Significance: 0.000000006; HSPs: 4)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 89 - 148
Target Start/End: Original strand, 37063146 - 37063205
Alignment:
| Q |
89 |
cttatatgaaagtagtttaacattattttaacttttgttgtaaaagtagtttatacataa |
148 |
Q |
| |
|
||||||||||| |||||| || |||||||| |||||||| || || |||||||||||||| |
|
|
| T |
37063146 |
cttatatgaaaatagtttgactttattttatcttttgttatagaaatagtttatacataa |
37063205 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 86 - 127
Target Start/End: Original strand, 39823190 - 39823231
Alignment:
| Q |
86 |
tagcttatatgaaagtagtttaacattattttaacttttgtt |
127 |
Q |
| |
|
||||||||||||||||||||| || |||||||| |||||||| |
|
|
| T |
39823190 |
tagcttatatgaaagtagtttgactttattttatcttttgtt |
39823231 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 35 - 79
Target Start/End: Original strand, 33533537 - 33533581
Alignment:
| Q |
35 |
tatgacatatttataagttgtttttaacttatttctgtaagctct |
79 |
Q |
| |
|
||||||||||| |||||||||||| |||||||||| |||||||| |
|
|
| T |
33533537 |
tatgacatattcataagttgttttcaacttatttccataagctct |
33533581 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 84 - 148
Target Start/End: Original strand, 35135729 - 35135793
Alignment:
| Q |
84 |
tatagcttatatgaaagtagtttaacattattttaacttttgttgtaaaagtagtttatacataa |
148 |
Q |
| |
|
|||||||||||||||| |||||| || |||||||| |||||||| || || || |||||||||| |
|
|
| T |
35135729 |
tatagcttatatgaaaatagtttgactttattttatcttttgttatagaaatatcttatacataa |
35135793 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 31; Significance: 0.00000002; HSPs: 8)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 46 - 92
Target Start/End: Complemental strand, 625633 - 625587
Alignment:
| Q |
46 |
tataagttgtttttaacttatttctgtaagctcttcagtatagctta |
92 |
Q |
| |
|
||||||||||||| ||||||||||| |||||||||||| ||| |||| |
|
|
| T |
625633 |
tataagttgttttcaacttatttctataagctcttcagaatatctta |
625587 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 35 - 93
Target Start/End: Complemental strand, 17269322 - 17269264
Alignment:
| Q |
35 |
tatgacatatttataagttgtttttaacttatttctgtaagctcttcagtatagcttat |
93 |
Q |
| |
|
|||||||| || || |||||||||||||||||| | ||||||||| ||| ||||||||| |
|
|
| T |
17269322 |
tatgacatgttcatgagttgtttttaacttattaccgtaagctctccaggatagcttat |
17269264 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 35 - 93
Target Start/End: Complemental strand, 47917308 - 47917250
Alignment:
| Q |
35 |
tatgacatatttataagttgtttttaacttatttctgtaagctcttcagtatagcttat |
93 |
Q |
| |
|
|||||||| || |||||||||||| ||||||||||| ||| || ||| ||||||||||| |
|
|
| T |
47917308 |
tatgacatgttcataagttgttttcaacttatttctttaaacttttcggtatagcttat |
47917250 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 84 - 130
Target Start/End: Complemental strand, 52286681 - 52286635
Alignment:
| Q |
84 |
tatagcttatatgaaagtagtttaacattattttaacttttgttgta |
130 |
Q |
| |
|
|||||||||||||||| | ||||||| |||||||| ||||||||||| |
|
|
| T |
52286681 |
tatagcttatatgaaaattgtttaactttattttatcttttgttgta |
52286635 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #5
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 101 - 146
Target Start/End: Original strand, 9507084 - 9507129
Alignment:
| Q |
101 |
tagtttaacattattttaacttttgttgtaaaagtagtttatacat |
146 |
Q |
| |
|
||||||||||||||||||||||||||| || || ||| |||||||| |
|
|
| T |
9507084 |
tagtttaacattattttaacttttgttatagaaatagcttatacat |
9507129 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #6
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 84 - 148
Target Start/End: Original strand, 4256109 - 4256173
Alignment:
| Q |
84 |
tatagcttatatgaaagtagtttaacattattttaacttttgttgtaaaagtagtttatacataa |
148 |
Q |
| |
|
||||||||||| |||| || |||||| ||||| || ||||||||||| || ||| |||||||||| |
|
|
| T |
4256109 |
tatagcttatacgaaaataatttaactttattgtatcttttgttgtagaaatagcttatacataa |
4256173 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #7
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 84 - 148
Target Start/End: Complemental strand, 17420206 - 17420142
Alignment:
| Q |
84 |
tatagcttatatgaaagtagtttaacattattttaacttttgttgtaaaagtagtttatacataa |
148 |
Q |
| |
|
|||||||||||||||| | ||| || |||||||| ||||| || ||||| |||||||||||||| |
|
|
| T |
17420206 |
tatagcttatatgaaaattgttcgactttattttatcttttcttataaaaatagtttatacataa |
17420142 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #8
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 53 - 93
Target Start/End: Original strand, 23373328 - 23373368
Alignment:
| Q |
53 |
tgtttttaacttatttctgtaagctcttcagtatagcttat |
93 |
Q |
| |
|
|||||| | |||||||||||||||||||||| ||||||||| |
|
|
| T |
23373328 |
tgttttcagcttatttctgtaagctcttcaggatagcttat |
23373368 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 29; Significance: 0.0000003; HSPs: 2)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 84 - 148
Target Start/End: Complemental strand, 31002764 - 31002700
Alignment:
| Q |
84 |
tatagcttatatgaaagtagtttaacattattttaacttttgttgtaaaagtagtttatacataa |
148 |
Q |
| |
|
|||||||||||||||| || ||| || |||||||| ||||||| || || |||||||||||||| |
|
|
| T |
31002764 |
tatagcttatatgaaaatattttgactttattttatcttttgtggttgaaatagtttatacataa |
31002700 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 46 - 90
Target Start/End: Complemental strand, 40439115 - 40439071
Alignment:
| Q |
46 |
tataagttgtttttaacttatttctgtaagctcttcagtatagct |
90 |
Q |
| |
|
|||||| ||||||||||||||||| |||||||||||| |||||| |
|
|
| T |
40439115 |
tataagctgtttttaacttatttccataagctcttcaggatagct |
40439071 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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