View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15982_high_46 (Length: 260)
Name: NF15982_high_46
Description: NF15982
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15982_high_46 |
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Alignment Details
Target: chr4 (Bit Score: 196; Significance: 1e-107; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 196; E-Value: 1e-107
Query Start/End: Original strand, 1 - 245
Target Start/End: Original strand, 51828531 - 51828771
Alignment:
| Q |
1 |
acttaaataaataacccagttgttgtaacggaatggagaaaaataagg-aaaatatctgaaatgacattatactctgtttttgaccaagttcatttaatg |
99 |
Q |
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| T |
51828531 |
acttaaataaataacccagttgttgtaaccgaatgaagaaaaataagggaaaatatctgaaatgacattatactctgtttttgaccaagttcatttaatg |
51828630 |
T |
|
| Q |
100 |
aaa-gactatttgagacttagtttgattcaacattctaaatcccaaaattttaggaactgaattgaaaataataataataatattattatttttaccatt |
198 |
Q |
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||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||| |
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| T |
51828631 |
aaaagactatttgagacttagtttgattcaacattctaaatcccaaaattttaggaactgaattgaa------aataataatattattttttttaccatt |
51828724 |
T |
|
| Q |
199 |
tgtttcaggagtgtgaaggttaaagccttcgaaactacccttcttct |
245 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
51828725 |
tgtttcaggagtgtgaaggttaaagccttcgaaactacccttcttct |
51828771 |
T |
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