View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15982_high_49 (Length: 250)
Name: NF15982_high_49
Description: NF15982
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15982_high_49 |
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Alignment Details
Target: chr3 (Bit Score: 224; Significance: 1e-123; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 224; E-Value: 1e-123
Query Start/End: Original strand, 1 - 236
Target Start/End: Original strand, 28449903 - 28450138
Alignment:
| Q |
1 |
ccaccatttctttcgccgtaacgttcttgaacctccgcaaataaagcatgaacaatctgcttctcatagatgaagccaagggcttgtcttcttttatgaa |
100 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
28449903 |
ccaccatttctttcgccgtaacgttcttgaacctccgcaaataaagcatgaacaatctgcttctcatagatgaagccaagggcttgtcttcttttatgaa |
28450002 |
T |
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| Q |
101 |
gtgaaccatcttttgcaagagtgatcattttatcaacatacttcctaattgcacttgctcttgccctggtggtcttgatgcggccatatttaaggagctg |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
28450003 |
gtgaaccatcttttgcaagagtgatcattttatcaacatacttcctaattgcacttgctcttgccctggtggtcttgatgcggccatatttaaggagctg |
28450102 |
T |
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| Q |
201 |
tgttgttaggcctcgaatgagtgccttacgctgatc |
236 |
Q |
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||| |||||||| || |||||||||||||||||||| |
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| T |
28450103 |
tgtcgttaggccacggatgagtgccttacgctgatc |
28450138 |
T |
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