View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15982_high_63 (Length: 224)
Name: NF15982_high_63
Description: NF15982
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15982_high_63 |
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Alignment Details
Target: chr8 (Bit Score: 164; Significance: 8e-88; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 164; E-Value: 8e-88
Query Start/End: Original strand, 3 - 214
Target Start/End: Original strand, 40460914 - 40461125
Alignment:
| Q |
3 |
ctggtcgacagagatgaaatcataccttgtagaagcaaaaacaaattaactaaataggtaattcagtataaccttgaagggtaaagaaataaaaacctga |
102 |
Q |
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| T |
40460914 |
ctggtcgtcagagataaaatcataccttgtaaaagcaaaaacaaattaactaaataggtaatataatataaccctgaagggtaaagaaataaaaacctga |
40461013 |
T |
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| Q |
103 |
tacacaaatccaaatttggagccaaacacccacacagaacatgcacaatcccacaaacctacgtatggacgctaacccaaattgtaaaagtatatagcat |
202 |
Q |
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| T |
40461014 |
taaacagattcaaatttggagccaaacacccacacataacatgcacaatcccacaaacctacgtatggacgctaacccaaattgtaaaagtatatagtat |
40461113 |
T |
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| Q |
203 |
gtgaactgatga |
214 |
Q |
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|||||||||||| |
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| T |
40461114 |
gtgaactgatga |
40461125 |
T |
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