View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15982_low_36 (Length: 292)
Name: NF15982_low_36
Description: NF15982
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15982_low_36 |
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Alignment Details
Target: chr7 (Bit Score: 263; Significance: 1e-147; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 263; E-Value: 1e-147
Query Start/End: Original strand, 18 - 280
Target Start/End: Complemental strand, 47004511 - 47004249
Alignment:
| Q |
18 |
ccttgctgctgtctctggttcttatgtttttggctctgctgtaagttctcatttacatcattttttggagggatttaattaataagtttatgatatacta |
117 |
Q |
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| T |
47004511 |
ccttgctgctgtctctggttcttatgtttttggctctgctgtaagttctcatttacatcattttttggagggatttaattaataagtttatgatatacta |
47004412 |
T |
|
| Q |
118 |
tatcagaattcaattcagaatgaactctatcactctcatcttgcaggtgggttattcatcccctgctcaatctggaatcacggatgacctcaatcttggc |
217 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
47004411 |
tatcagaattcaattcagaatgaactctatcactctcatcttgcaggtgggttattcatcccctgctcaatctggaatcacggatgacctcaatcttggc |
47004312 |
T |
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| Q |
218 |
gtggccgaggtttgaattttctttgaatgtttgaatcacatgaacaactcatttatctatatt |
280 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
47004311 |
gtggccgaggtttgaattttctttgaatgtttgaatcacatgaacaactcatttatctatatt |
47004249 |
T |
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