View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15982_low_58 (Length: 237)
Name: NF15982_low_58
Description: NF15982
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15982_low_58 |
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Alignment Details
Target: chr3 (Bit Score: 213; Significance: 1e-117; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 213; E-Value: 1e-117
Query Start/End: Original strand, 1 - 221
Target Start/End: Complemental strand, 28449885 - 28449665
Alignment:
| Q |
1 |
gaaccctaccaaggcggggtgataatgcacccatggcatacattgaacttgtgtaattattagcggccgcctttatgcgatgcaattattagcattcaag |
100 |
Q |
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| T |
28449885 |
gaaccctaccaaggcggggtgataatgcacccatggcatacattgaacttgtgtaattattagtggccgcctttatgcgatgcaattattagcattcaag |
28449786 |
T |
|
| Q |
101 |
ctgcaatgttgagatttgtaatgcttccaactgtaacaattgagtctaaagtttttcccatgtttagttgtatttgtatttgtcagtttgattctttttt |
200 |
Q |
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||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
28449785 |
ctgcaatgttgagatttgtaatgcttccaactgtaacaattgattctaaagtttttcccatgtttagttgtatttgtatttgtcagtttgattctttttt |
28449686 |
T |
|
| Q |
201 |
gagttgtatgtatggacaaac |
221 |
Q |
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||||||||||||||||||||| |
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| T |
28449685 |
gagttgtatgtatggacaaac |
28449665 |
T |
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