View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF15982_low_6 (Length: 522)

Name: NF15982_low_6
Description: NF15982
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF15982_low_6
NF15982_low_6
[»] chr1 (29 HSPs)
chr1 (12-522)||(42267680-42268190)
chr1 (20-178)||(17642009-17642168)
chr1 (19-178)||(11397894-11398053)
chr1 (20-178)||(26325756-26325915)
chr1 (20-146)||(49078058-49078185)
chr1 (23-176)||(2567223-2567377)
chr1 (21-178)||(41663861-41664019)
chr1 (20-178)||(8763935-8764094)
chr1 (20-178)||(10422732-10422891)
chr1 (20-182)||(31576548-31576711)
chr1 (114-176)||(5504070-5504132)
chr1 (20-178)||(17389716-17389874)
chr1 (20-178)||(2980936-2981095)
chr1 (20-146)||(5855466-5855593)
chr1 (20-182)||(9853278-9853440)
chr1 (107-178)||(16956498-16956569)
chr1 (20-146)||(18915811-18915938)
chr1 (20-146)||(33004052-33004179)
chr1 (20-146)||(48798107-48798234)
chr1 (112-178)||(4581687-4581753)
chr1 (76-178)||(9659184-9659286)
chr1 (20-94)||(31152660-31152734)
chr1 (20-89)||(41743217-41743286)
chr1 (20-144)||(50503400-50503525)
chr1 (20-182)||(30927728-30927892)
chr1 (76-178)||(26660138-26660240)
chr1 (108-182)||(10336549-10336623)
chr1 (108-145)||(18649390-18649427)
chr1 (20-56)||(33418243-33418279)
[»] chr3 (34 HSPs)
chr3 (20-178)||(45877397-45877556)
chr3 (20-178)||(15320129-15320288)
chr3 (20-174)||(29127862-29128017)
chr3 (20-178)||(25294903-25295062)
chr3 (20-178)||(26207806-26207965)
chr3 (19-178)||(7650169-7650329)
chr3 (114-178)||(47219182-47219246)
chr3 (20-146)||(32873586-32873712)
chr3 (19-146)||(47749142-47749269)
chr3 (20-178)||(54261169-54261328)
chr3 (107-182)||(55069680-55069755)
chr3 (24-178)||(3136699-3136853)
chr3 (20-98)||(10855327-10855405)
chr3 (20-98)||(13893869-13893947)
chr3 (20-174)||(47471775-47471929)
chr3 (108-182)||(50405604-50405678)
chr3 (20-176)||(29135856-29136013)
chr3 (24-172)||(30767258-30767407)
chr3 (20-172)||(33251605-33251758)
chr3 (20-89)||(42412869-42412938)
chr3 (20-178)||(928543-928702)
chr3 (24-83)||(22405644-22405703)
chr3 (107-178)||(23511598-23511669)
chr3 (20-178)||(29762160-29762319)
chr3 (112-178)||(3507538-3507604)
chr3 (124-182)||(19873420-19873478)
chr3 (120-178)||(28572216-28572274)
chr3 (107-181)||(35923625-35923699)
chr3 (108-146)||(43330769-43330807)
chr3 (19-89)||(46529965-46530035)
chr3 (112-178)||(49021208-49021274)
chr3 (120-182)||(50753342-50753404)
chr3 (120-177)||(26361973-26362030)
chr3 (20-56)||(48341963-48341999)
[»] chr7 (31 HSPs)
chr7 (23-182)||(1797409-1797569)
chr7 (20-178)||(48804629-48804788)
chr7 (20-146)||(4228790-4228914)
chr7 (22-146)||(34659174-34659299)
chr7 (19-146)||(4195238-4195366)
chr7 (19-178)||(3353370-3353529)
chr7 (20-174)||(17748390-17748545)
chr7 (20-146)||(26423323-26423450)
chr7 (19-178)||(43346783-43346943)
chr7 (20-182)||(13095804-13095967)
chr7 (23-178)||(24969330-24969484)
chr7 (20-174)||(42210270-42210425)
chr7 (20-178)||(22573759-22573917)
chr7 (20-146)||(4973146-4973273)
chr7 (24-182)||(23658130-23658288)
chr7 (24-174)||(42032046-42032197)
chr7 (120-178)||(48551904-48551962)
chr7 (19-146)||(43925457-43925585)
chr7 (20-178)||(10047880-10048039)
chr7 (20-146)||(14650263-14650390)
chr7 (20-178)||(43861976-43862135)
chr7 (20-99)||(45447916-45447995)
chr7 (23-97)||(5069901-5069975)
chr7 (112-178)||(38578871-38578937)
chr7 (112-182)||(39420876-39420946)
chr7 (112-178)||(41945512-41945578)
chr7 (108-178)||(44961642-44961712)
chr7 (112-146)||(49142705-49142739)
chr7 (20-89)||(19914796-19914865)
chr7 (20-144)||(47341822-47341947)
chr7 (20-56)||(5039545-5039581)
[»] chr2 (28 HSPs)
chr2 (23-182)||(21286390-21286550)
chr2 (20-146)||(21180350-21180477)
chr2 (24-182)||(7787003-7787162)
chr2 (20-178)||(29422158-29422317)
chr2 (44-178)||(2784900-2785034)
chr2 (30-182)||(25549681-25549834)
chr2 (19-178)||(41031910-41032069)
chr2 (20-178)||(7747217-7747376)
chr2 (20-178)||(8410074-8410233)
chr2 (23-177)||(37560119-37560274)
chr2 (20-182)||(42770651-42770814)
chr2 (24-182)||(24179518-24179674)
chr2 (112-178)||(25540408-25540474)
chr2 (20-172)||(10046487-10046639)
chr2 (112-177)||(28525460-28525525)
chr2 (20-146)||(2550811-2550938)
chr2 (120-178)||(20116616-20116674)
chr2 (19-178)||(12864166-12864326)
chr2 (27-178)||(39806889-39807041)
chr2 (20-71)||(14853479-14853530)
chr2 (20-146)||(18649062-18649189)
chr2 (20-146)||(38005345-38005472)
chr2 (20-173)||(5035231-5035385)
chr2 (20-177)||(6358156-6358314)
chr2 (112-178)||(10823096-10823162)
chr2 (20-178)||(20612538-20612699)
chr2 (20-145)||(34356149-34356275)
chr2 (113-178)||(34722717-34722782)
[»] chr8 (25 HSPs)
chr8 (19-178)||(45521115-45521274)
chr8 (24-182)||(18373961-18374120)
chr8 (20-178)||(15884560-15884718)
chr8 (20-178)||(2467122-2467281)
chr8 (20-174)||(8141049-8141204)
chr8 (20-178)||(14666075-14666234)
chr8 (20-182)||(44893278-44893441)
chr8 (20-146)||(29933720-29933846)
chr8 (20-146)||(33935771-33935898)
chr8 (20-146)||(6100419-6100546)
chr8 (24-146)||(17981392-17981515)
chr8 (20-146)||(583761-583886)
chr8 (20-178)||(14846523-14846681)
chr8 (120-174)||(43027353-43027407)
chr8 (24-146)||(33401835-33401958)
chr8 (59-174)||(36662391-36662506)
chr8 (18-89)||(38922508-38922579)
chr8 (112-178)||(4479300-4479366)
chr8 (20-130)||(30903283-30903393)
chr8 (108-173)||(3567940-3568005)
chr8 (20-97)||(6940505-6940582)
chr8 (19-80)||(10535506-10535567)
chr8 (20-89)||(13085471-13085540)
chr8 (19-68)||(17845679-17845728)
chr8 (20-176)||(24938568-24938725)
[»] chr5 (35 HSPs)
chr5 (20-178)||(42086271-42086430)
chr5 (20-178)||(8513463-8513622)
chr5 (20-178)||(41163464-41163622)
chr5 (20-178)||(1538375-1538534)
chr5 (20-178)||(20525782-20525941)
chr5 (112-178)||(42291509-42291575)
chr5 (74-178)||(21375350-21375454)
chr5 (20-178)||(5731924-5732083)
chr5 (20-146)||(19572668-19572795)
chr5 (19-145)||(24498926-24499052)
chr5 (112-182)||(39099779-39099849)
chr5 (20-178)||(42861222-42861381)
chr5 (108-182)||(3653914-3653988)
chr5 (44-177)||(11845806-11845940)
chr5 (76-146)||(38897755-38897825)
chr5 (112-178)||(43399165-43399231)
chr5 (108-177)||(41801010-41801079)
chr5 (18-70)||(23383590-23383642)
chr5 (107-171)||(24875377-24875441)
chr5 (20-184)||(37263185-37263349)
chr5 (20-178)||(30349523-30349682)
chr5 (112-178)||(9805041-9805107)
chr5 (20-98)||(18136365-18136443)
chr5 (120-174)||(27648433-27648487)
chr5 (20-141)||(28857072-28857194)
chr5 (20-89)||(6767145-6767214)
chr5 (20-89)||(7866525-7866594)
chr5 (20-89)||(9812816-9812885)
chr5 (20-89)||(12704958-12705027)
chr5 (73-146)||(25452923-25452996)
chr5 (120-177)||(27484206-27484263)
chr5 (20-89)||(35403606-35403675)
chr5 (114-182)||(6764457-6764525)
chr5 (106-146)||(14974360-14974400)
chr5 (23-95)||(18327717-18327789)
[»] chr4 (30 HSPs)
chr4 (19-178)||(33647668-33647828)
chr4 (20-178)||(24166398-24166557)
chr4 (20-178)||(29895735-29895894)
chr4 (20-178)||(38165975-38166134)
chr4 (20-146)||(1446774-1446901)
chr4 (20-145)||(53599008-53599134)
chr4 (18-146)||(47078404-47078533)
chr4 (20-178)||(2559255-2559414)
chr4 (20-146)||(3574482-3574609)
chr4 (20-182)||(8888970-8889133)
chr4 (107-178)||(14859327-14859398)
chr4 (108-178)||(6032647-6032717)
chr4 (112-174)||(43458654-43458716)
chr4 (112-182)||(49260665-49260735)
chr4 (113-178)||(40780865-40780930)
chr4 (93-182)||(46108713-46108802)
chr4 (19-87)||(4736544-4736612)
chr4 (20-56)||(26480076-26480112)
chr4 (20-96)||(41162969-41163045)
chr4 (107-182)||(14597900-14597975)
chr4 (18-89)||(34667696-34667767)
chr4 (107-178)||(47682386-47682457)
chr4 (20-98)||(1940859-1940937)
chr4 (112-178)||(7246650-7246716)
chr4 (108-182)||(8064798-8064872)
chr4 (108-178)||(14858747-14858817)
chr4 (112-178)||(16450341-16450407)
chr4 (76-178)||(48834704-48834806)
chr4 (20-89)||(27248376-27248445)
chr4 (20-89)||(27531751-27531820)
[»] chr6 (27 HSPs)
chr6 (20-178)||(14107362-14107521)
chr6 (76-182)||(13391290-13391396)
chr6 (20-178)||(29333143-29333301)
chr6 (19-178)||(5253227-5253387)
chr6 (20-178)||(8932608-8932767)
chr6 (20-178)||(8944074-8944233)
chr6 (20-178)||(19089445-19089604)
chr6 (20-178)||(21898595-21898754)
chr6 (20-182)||(2271303-2271464)
chr6 (20-178)||(6606101-6606260)
chr6 (23-178)||(13036008-13036164)
chr6 (20-178)||(8938658-8938817)
chr6 (20-98)||(9179821-9179899)
chr6 (112-178)||(9633629-9633695)
chr6 (97-182)||(21872928-21873013)
chr6 (103-178)||(8149801-8149876)
chr6 (20-87)||(22709862-22709929)
chr6 (107-178)||(30788857-30788928)
chr6 (112-178)||(3601124-3601190)
chr6 (111-181)||(33940050-33940120)
chr6 (107-173)||(34954628-34954694)
chr6 (20-89)||(8612068-8612137)
chr6 (20-89)||(10311563-10311632)
chr6 (19-56)||(19230684-19230721)
chr6 (108-177)||(32157172-32157241)
chr6 (112-148)||(9366457-9366493)
chr6 (112-172)||(29444775-29444835)
[»] scaffold0011 (2 HSPs)
scaffold0011 (107-178)||(224351-224422)
scaffold0011 (113-177)||(186557-186621)
[»] scaffold0170 (1 HSPs)
scaffold0170 (20-173)||(9791-9945)
[»] scaffold0029 (1 HSPs)
scaffold0029 (18-176)||(40988-41147)
[»] scaffold0332 (1 HSPs)
scaffold0332 (23-104)||(15280-15361)
[»] scaffold0004 (1 HSPs)
scaffold0004 (26-182)||(94980-95136)
[»] scaffold0209 (1 HSPs)
scaffold0209 (20-146)||(12521-12646)
[»] scaffold0016 (1 HSPs)
scaffold0016 (18-70)||(8823-8875)
[»] scaffold0005 (1 HSPs)
scaffold0005 (107-182)||(219403-219478)
[»] scaffold0116 (1 HSPs)
scaffold0116 (96-174)||(17413-17491)
[»] scaffold0086 (1 HSPs)
scaffold0086 (120-178)||(26230-26288)
[»] scaffold0006 (1 HSPs)
scaffold0006 (20-98)||(68463-68541)
[»] scaffold0010 (2 HSPs)
scaffold0010 (20-56)||(25911-25947)
scaffold0010 (114-178)||(155715-155779)


Alignment Details
Target: chr1 (Bit Score: 391; Significance: 0; HSPs: 29)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 391; E-Value: 0
Query Start/End: Original strand, 12 - 522
Target Start/End: Original strand, 42267680 - 42268190
Alignment:
Q  12 aagaacacaaccaagttgtttgggctccactagcaaggagctcctaacaaggatgtatccaagaaataccgggttcgacttccagggaaaaaatatttga 111  Q
    ||||||||||||||||||||||||||||||| ||||||||||||| |||| |||||| ||  ||||||||| |||||||| | |||| || |||  ||||    
T  42267680 aagaacacaaccaagttgtttgggctccactggcaaggagctccttacaatgatgtaccctggaaataccgagttcgactcctaggggaacaatgcttga 42267779  T
Q  112 ccagtgcacatgcctctacgtacgagccggattagacatccatatttgatgggtcggaaaccggtgcaaaatacattcaaagatctttaaatgtagattc 211  Q
    | ||| |||||| |||||  ||||||||||||||||| | |||||||  ||| ||||||||||||||||| |||||||||||||||||| |||||| |||    
T  42267780 ctagtacacatgtctctatatacgagccggattagacgttcatatttagtggatcggaaaccggtgcaaagtacattcaaagatctttagatgtaggttc 42267879  T
Q  212 atcaaagtatgatcttctatatcctcgttgataatgcaaatttaagaaattggatttcaactgagttgtgtgtaaagtttcctatggccttaatctacgt 311  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  42267880 atcaaagtatgaccttctatatcctcgttgataatgcaaatttaagaaattggatttcaactgagttgtgtgtaaagtttcctatggccttaatctacgt 42267979  T
Q  312 gcatccacggtatctcctcctcctcctgaatcaattccaatgtcttccatctcatcttcctctcatgactatcttcaccttagaaatgaatattttcaac 411  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  42267980 gcatccacggtatctcctcctcctccagaatcaattccaatgtcttccatctcatcttcctctcatgacgatcttcaccttagaaatgaatattttcaac 42268079  T
Q  412 tactccctctctttttgatatgacaaaggggagaatgaattaaggagctaaatttagaaatttgagaagtaatattttgtgtactctagaaatgaatatt 511  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  42268080 tactccctctctttttgatatgacaaaggggggaatgaattaaggagctaaatttagaaatttgagaagtaatattttgtgtactctagaaatgaatatt 42268179  T
Q  512 tagaaatgaaa 522  Q
    |||||||||||    
T  42268180 tagaaatgaaa 42268190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 20 - 178
Target Start/End: Complemental strand, 17642168 - 17642009
Alignment:
Q  20 aaccaagttgtttgggctccactagcaaggagctcctaacaaggatgtatccaagaaataccgggttcgacttccagggaaaa-aatatttgaccagtgc 118  Q
    ||||||||||||||||||||| |  ||||||||||||  || ||| ||| ||| ||||||| |||||||| | ||||||  || || | ||| |||||||    
T  17642168 aaccaagttgtttgggctccagtgacaaggagctccttccacggacgtacccaggaaatactgggttcgattcccagggggaacaacacttggccagtgc 17642069  T
Q  119 acatgcctctacgtacgagccggattagacatccatatttgatgggtcggaaaccggtgc 178  Q
     |||||||||||| |||||||||||||| | ||||  |||| |||||||||||| |||||    
T  17642068 gcatgcctctacgcacgagccggattagtcgtccacctttggtgggtcggaaactggtgc 17642009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 19 - 178
Target Start/End: Complemental strand, 11398053 - 11397894
Alignment:
Q  19 caaccaagttgtttgggctccactagcaaggagctcctaacaaggatgtatccaagaaataccgggttcgacttccagggaaaaaatatttgaccagtgc 118  Q
    ||||||||||| |||||||||| | |||||||||||||  |||||||||||||    |||||||||||||| | | |||| || ||  |||| ||| |||    
T  11398053 caaccaagttgcttgggctccagtggcaaggagctccttccaaggatgtatccggagaataccgggttcgattccgaggggaacaacgtttggccaatgc 11397954  T
Q  119 acatgcctctacgtacgagccggattagacatccatatttgatgggtcggaaaccggtgc 178  Q
      ||||||||||| | ||| |||||||| | ||||  |||| ||||||||||| ||||||    
T  11397953 gtatgcctctacgcatgagtcggattagtcgtccacctttggtgggtcggaaatcggtgc 11397894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 20 - 178
Target Start/End: Original strand, 26325756 - 26325915
Alignment:
Q  20 aaccaagttgtttgggctccactagcaaggagctcctaacaaggatgtatccaagaaataccgggttcgacttccag-ggaaaaaatatttgaccagtgc 118  Q
    |||||||||| | |||||||| | |||||||||||||  |||||| |||||| || |||| ||||||||| | |||| || || || | |||  ||||||    
T  26325756 aaccaagttgctagggctccagtggcaaggagctcctttcaaggacgtatccgaggaatatcgggttcgattcccagcgggaacaacacttggtcagtgc 26325855  T
Q  119 acatgcctctacgtacgagccggattagacatccatatttgatgggtcggaaaccggtgc 178  Q
     |||||||||||| | |||||||||||| | ||||   ||| ||||||||||||||||||    
T  26325856 gcatgcctctacgcatgagccggattagtcgtccaccattggtgggtcggaaaccggtgc 26325915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 20 - 146
Target Start/End: Original strand, 49078058 - 49078185
Alignment:
Q  20 aaccaagttgtttgggctccactagcaaggagctcctaacaaggatgtatccaagaaataccgggttcgacttcca-gggaaaaaatatttgaccagtgc 118  Q
    |||||||||| |||||||||| | |||||||||||||   ||||| ||||||  | |||||||||||||| | ||| |||||| || | ||| |||||||    
T  49078058 aaccaagttgcttgggctccagtggcaaggagctccttctaaggacgtatccggggaataccgggttcgattcccaggggaaacaacacttggccagtgc 49078157  T
Q  119 acatgcctctacgtacgagccggattag 146  Q
     |||||||||||| | ||||||||||||    
T  49078158 gcatgcctctacgcatgagccggattag 49078185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 23 - 176
Target Start/End: Original strand, 2567223 - 2567377
Alignment:
Q  23 caagttgtttgggctccactagcaaggagctcctaacaaggatgtatccaagaaataccgggttcgacttccagggaaaa-aatatttgaccagtgcaca 121  Q
    ||||||||||||||| |||| |||||||||||||  |||||| |||| |    |||||||||||||| || | ||||||| ||   ||| ||||||| ||    
T  2567223 caagttgtttgggcttcactggcaaggagctccttccaaggacgtattcggagaataccgggttcgattttcggggaaaacaacgcttggccagtgcgca 2567322  T
Q  122 tgcctctacgtacgagccggattagacatccatatttgatgggtcggaaaccggt 176  Q
    |||||||||  ||||| | |||||| | ||||| |||| ||||||||||||||||    
T  2567323 tgcctctactcacgagtcagattagccgtccatctttggtgggtcggaaaccggt 2567377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 21 - 178
Target Start/End: Complemental strand, 41664019 - 41663861
Alignment:
Q  21 accaagttgtttgggctccactagcaaggagctcctaacaaggatgtatccaagaaataccgggttcgacttcca-gggaaaaaatatttgaccagtgca 119  Q
    |||||||||||||||||||| | |||||||||||||   ||||| ||||||  | |||||||||||||| | ||| ||| || || | |||  ||||||     
T  41664019 accaagttgtttgggctccagtggcaaggagctccttctaaggacgtatccggggaataccgggttcgattcccagggggaacaacacttggtcagtgcg 41663920  T
Q  120 catgcctctacgtacgagccggattagacatccatatttgatgggtcggaaaccggtgc 178  Q
    |||||||||||| | |||| ||||||| | ||||   ||| ||||||||||||||||||    
T  41663919 catgcctctacgcatgagctggattagtcgtccaccattggtgggtcggaaaccggtgc 41663861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 20 - 178
Target Start/End: Original strand, 8763935 - 8764094
Alignment:
Q  20 aaccaagttgtttgggctccactagcaaggagctcctaacaaggatgtatccaagaaataccgggttcgacttccagggaaaa-aatatttgaccagtgc 118  Q
    |||||||||| |||||||||  | |||||||||||||  |||||| ||| ||  | |||| ||||||||  | ||||||  || || | ||| |||||||    
T  8763935 aaccaagttgcttgggctcccgtggcaaggagctccttccaaggacgtacccggggaatatcgggttcgtttcccagggggaacaacacttggccagtgc 8764034  T
Q  119 acatgcctctacgtacgagccggattagacatccatatttgatgggtcggaaaccggtgc 178  Q
     |||||||||||| |||||||||||||| | ||||   ||| ||||||||||||||||||    
T  8764035 gcatgcctctacgcacgagccggattagtcgtccaccgttggtgggtcggaaaccggtgc 8764094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 20 - 178
Target Start/End: Original strand, 10422732 - 10422891
Alignment:
Q  20 aaccaagttgtttgggctccactagcaaggagctcctaacaaggatgtatccaagaaataccgggttcgacttccagg-gaaaaaatatttgaccagtgc 118  Q
    |||||||||||||||||| || | |||||||||||||  ||| || |||| |  | |||||||||||||| ||| ||| | || || | ||| |||||||    
T  10422732 aaccaagttgtttgggctacagtggcaaggagctccttccaatgacgtattcggggaataccgggttcgatttctaggaggaacaacacttggccagtgc 10422831  T
Q  119 acatgcctctacgtacgagccggattagacatccatatttgatgggtcggaaaccggtgc 178  Q
     |||||||||||| | |||||||||||| | ||||  |||| |  |||||||||||||||    
T  10422832 gcatgcctctacgcatgagccggattagtcgtccacctttggtaagtcggaaaccggtgc 10422891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 20 - 182
Target Start/End: Complemental strand, 31576711 - 31576548
Alignment:
Q  20 aaccaagttgtttgggctccactagcaaggagctcctaacaaggatgtatccaagaaataccgggttcgacttccagggaaaa-aatatttgaccagtgc 118  Q
    ||||||||||||||||||| | | ||||||||||| |   ||||| ||||||   ||||||||||||||| |  ||||| ||| |||  ||| ||| |||    
T  31576711 aaccaagttgtttgggctctagtggcaaggagctcattctaaggacgtatcccgaaaataccgggttcgattctcaggggaaacaatgcttggccaatgc 31576612  T
Q  119 acatgcctctacgtacgagccggattagacatccatatttgatgggtcggaaaccggtgcaaaa 182  Q
       |||||||||| | ||||||| |||| | ||||| ||||||| |||||||||||||||||||    
T  31576611 gtgtgcctctacgcatgagccggcttagtcgtccatctttgatgtgtcggaaaccggtgcaaaa 31576548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 114 - 176
Target Start/End: Original strand, 5504070 - 5504132
Alignment:
Q  114 agtgcacatgcctctacgtacgagccggattagacatccatatttgatgggtcggaaaccggt 176  Q
    |||||||||||||||||| | |||||||||||| | ||||  |||||||||||||||||||||    
T  5504070 agtgcacatgcctctacgcatgagccggattagtcgtccacctttgatgggtcggaaaccggt 5504132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 20 - 178
Target Start/End: Original strand, 17389716 - 17389874
Alignment:
Q  20 aaccaagttgtttgggctccactagcaaggagctcctaacaaggatgtatccaagaaataccgggttcgacttccagggaaaaaatatttgaccagtgca 119  Q
    |||||||| | |||| ||||| | |||||||||||||  ||| || || |||  |||||| ||| ||||| || | ||| || ||| ||||||||||||     
T  17389716 aaccaagtagcttggactccagtggcaaggagctcctttcaatgacgtttccgggaaatatcggattcgattttcgggggaacaatgtttgaccagtgcg 17389815  T
Q  120 catgcctctacgtacgagccggattagacatccatatttgatgggtcggaaaccggtgc 178  Q
    |||||||| ||| | |||| ||||||| | |||||   |||||||||||||||||||||    
T  17389816 catgcctccacgcatgagctggattagtcgtccattgctgatgggtcggaaaccggtgc 17389874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 20 - 178
Target Start/End: Complemental strand, 2981095 - 2980936
Alignment:
Q  20 aaccaagttgtttgggctccactagcaaggagctcctaacaaggatgtatccaagaaataccgggttcgacttccag-ggaaaaaatatttgaccagtgc 118  Q
    |||||||||| |||||||| | | |||||||||||||  || ||| ||||||  | ||||| |||||||| | |||| || || || | ||| ||||||     
T  2981095 aaccaagttgcttgggctctagtggcaaggagctccttccagggacgtatccggggaatactgggttcgattcccagcgggaacaacacttggccagtgt 2980996  T
Q  119 acatgcctctacgtacgagccggattagacatccatatttgatgggtcggaaaccggtgc 178  Q
     |||||||||||| ||||| |||||||| | ||||| |||  ||||||||||| ||||||    
T  2980995 gcatgcctctacgcacgagtcggattagtcgtccatgtttagtgggtcggaaatcggtgc 2980936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 20 - 146
Target Start/End: Original strand, 5855466 - 5855593
Alignment:
Q  20 aaccaagttgtttgggctccactagcaaggagctcctaacaaggatgtatccaagaaataccgggttcgacttccagg-gaaaaaatatttgaccagtgc 118  Q
    ||||||||||||||||||||| | |||||||||||||  |||||| |||| |  | |||||||||||||| | ||||| | || ||   ||| |||||||    
T  5855466 aaccaagttgtttgggctccagtggcaaggagctccttccaaggacgtattcggggaataccgggttcgattcccaggaggaacaacgcttggccagtgc 5855565  T
Q  119 acatgcctctacgtacgagccggattag 146  Q
     |||||||||||| | ||| ||||||||    
T  5855566 gcatgcctctacgcatgaggcggattag 5855593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 20 - 182
Target Start/End: Complemental strand, 9853440 - 9853278
Alignment:
Q  20 aaccaagttgtttgggctccactagcaaggagctcctaacaaggatgtatccaagaaataccgggttcgacttcca-gggaaaaaatatttgaccagtgc 118  Q
    |||||||||||| |||||||| | |||||||||||||  |||||||||| ||   ||||||||||||||| | | | |||||| ||  ||| ||||||||    
T  9853440 aaccaagttgtt-gggctccagtggcaaggagctccttccaaggatgtacccggaaaataccgggttcgattcctaggggaaacaacgttttaccagtgc 9853342  T
Q  119 acatgcctctacgtacgagccggattagacatccatatttgatgggtcggaaaccggtgcaaaa 182  Q
     |||||||||||  |||| || |||||  | ||||  |||| |||||| |||| ||||||||||    
T  9853341 gcatgcctctacacacgaaccagattaatcgtccacctttggtgggtcagaaatcggtgcaaaa 9853278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 107 - 178
Target Start/End: Original strand, 16956498 - 16956569
Alignment:
Q  107 tttgaccagtgcacatgcctctacgtacgagccggattagacatccatatttgatgggtcggaaaccggtgc 178  Q
    |||||||||||| |||||||||||| |||||||||||||| ||  ||  |||| ||||||||||||| ||||    
T  16956498 tttgaccagtgcgcatgcctctacgcacgagccggattagtcactcacctttggtgggtcggaaaccagtgc 16956569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 20 - 146
Target Start/End: Original strand, 18915811 - 18915938
Alignment:
Q  20 aaccaagttgtttgggctccactagcaaggagctcctaacaaggatgtatccaagaaataccgggttcgacttcca-gggaaaaaatatttgaccagtgc 118  Q
    |||||||||||||||||| || | |||||||||| ||  |||||| ||| ||  | |||||||||||||| | ||| ||| || || | ||| ||||||     
T  18915811 aaccaagttgtttgggcttcagtggcaaggagcttcttccaaggacgtacccggggaataccgggttcgattcccagggggaacaacacttggccagtgt 18915910  T
Q  119 acatgcctctacgtacgagccggattag 146  Q
     |||||||||||| ||||||||||||||    
T  18915911 gcatgcctctacgcacgagccggattag 18915938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 20 - 146
Target Start/End: Complemental strand, 33004179 - 33004052
Alignment:
Q  20 aaccaagttgtttgggctccactagcaaggagctcctaacaaggatgtatccaagaaataccgggttcgacttccagggaaaa-aatatttgaccagtgc 118  Q
    |||||||||| |||||||||| |    ||||||||||  |||||| ||||||  | |||| ||| ||||| |||||||| ||| |||  ||| |||||||    
T  33004179 aaccaagttgcttgggctccagtgatgaggagctccttccaaggacgtatccggggaatatcggattcgatttccaggggaaacaatgcttggccagtgc 33004080  T
Q  119 acatgcctctacgtacgagccggattag 146  Q
     |||||||||||| ||||||||||||||    
T  33004079 gcatgcctctacgcacgagccggattag 33004052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 20 - 146
Target Start/End: Complemental strand, 48798234 - 48798107
Alignment:
Q  20 aaccaagttgtttgggctccactagcaaggagctcctaacaaggatgtatccaagaaataccgggttcgacttccagggaaaa-aatatttgaccagtgc 118  Q
    |||||||||||| |||||||| | |||||||||||||  ||| || ||||||  | |||| ||||||||| ||||||||  || ||   ||||| |||||    
T  48798234 aaccaagttgttggggctccagtggcaaggagctccttccaatgacgtatccggggaatatcgggttcgatttccagggggaacaacgcttgactagtgc 48798135  T
Q  119 acatgcctctacgtacgagccggattag 146  Q
     |||||||||||| | ||||||||||||    
T  48798134 gcatgcctctacgcatgagccggattag 48798107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 112 - 178
Target Start/End: Complemental strand, 4581753 - 4581687
Alignment:
Q  112 ccagtgcacatgcctctacgtacgagccggattagacatccatatttgatgggtcggaaaccggtgc 178  Q
    ||||||| |||||||||||| |||||||||| ||| | ||||  |||| ||||||||||||||||||    
T  4581753 ccagtgcgcatgcctctacgcacgagccggaatagtcgtccacctttggtgggtcggaaaccggtgc 4581687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 76 - 178
Target Start/End: Complemental strand, 9659286 - 9659184
Alignment:
Q  76 aataccgggttcgacttccagggaaaaaatatttgaccagtgcacatgcctctacgtacgagccggattagacatccatatttgatgggtcggaaaccgg 175  Q
    |||||||||||||| | |||||| || ||  |||||| ||||| ||||||| |||| | |||||||||||| | ||||  |||| ||||| |||||||||    
T  9659286 aataccgggttcgattcccaggggaacaacgtttgactagtgcgcatgcctttacgcatgagccggattagtcgtccacctttggtgggttggaaaccgg 9659187  T
Q  176 tgc 178  Q
    |||    
T  9659186 tgc 9659184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 20 - 94
Target Start/End: Original strand, 31152660 - 31152734
Alignment:
Q  20 aaccaagttgtttgggctccactagcaaggagctcctaacaaggatgtatccaagaaataccgggttcgacttcc 94  Q
    ||||||||||||||||||| | | ||||||||||| |  |||||||||| ||| | |||||||||||||| ||||    
T  31152660 aaccaagttgtttgggctctagtggcaaggagctctttccaaggatgtacccagggaataccgggttcgatttcc 31152734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 20 - 89
Target Start/End: Original strand, 41743217 - 41743286
Alignment:
Q  20 aaccaagttgtttgggctccactagcaaggagctcctaacaaggatgtatccaagaaataccgggttcga 89  Q
    |||||||||| |||||||||  | |||||||||||||  |||||| |||||| || ||||||||||||||    
T  41743217 aaccaagttgcttgggctccggtggcaaggagctccttccaaggacgtatccgaggaataccgggttcga 41743286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 20 - 144
Target Start/End: Complemental strand, 50503525 - 50503400
Alignment:
Q  20 aaccaagttgtttgggctccactagcaaggagctcctaacaaggatgtatccaagaaataccgggttcgacttccagggaaaa-aatatttgaccagtgc 118  Q
    ||||||||||| ||| ||| | | || ||||||||||  |||||| ||||||  | |||| ||||||||| | ||||||  || || | |||||||||||    
T  50503525 aaccaagttgtatggactctagtggcgaggagctcctttcaaggacgtatccggggaatatcgggttcgattcccagggggaacaacacttgaccagtgc 50503426  T
Q  119 acatgcctctacgtacgagccggatt 144  Q
     |||||||||||| ||||||||||||    
T  50503425 gcatgcctctacgcacgagccggatt 50503400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 20 - 182
Target Start/End: Complemental strand, 30927892 - 30927728
Alignment:
Q  20 aaccaagttgtttggg-ctccactagcaaggagctcctaacaaggatgtatccaagaaataccgggttcgacttccag-ggaaaaaatatttgaccagtg 117  Q
    ||||||||||||| || ||||| | |||||||||||||  |||||| ||| |   |||||| ||||||||| |||||| || || ||   ||| ||| ||    
T  30927892 aaccaagttgttttggactccagtggcaaggagctccttccaaggacgtacctgggaaatatcgggttcgatttccagagggaacaacgcttggccaatg 30927793  T
Q  118 cacatgcctctacgtacgagccggattagacatccatatttgatgggtcggaaaccggtgcaaaa 182  Q
      |||||||||||| | |||||||||||| | ||||  |||| |||||| |||||||||||||||    
T  30927792 tgcatgcctctacgcatgagccggattagtcgtccacttttggtgggtcagaaaccggtgcaaaa 30927728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 76 - 178
Target Start/End: Original strand, 26660138 - 26660240
Alignment:
Q  76 aataccgggttcgacttcca-gggaaaaaatatttgaccagtgcacatgcctctacgtacgagccggattagacatccatatttgatgggtcggaaaccg 174  Q
    |||||||||||||| ||||| ||| || || |||||| |||| | |||||||||||| | |||||||||||| |  |||  |||| ||||||||||||||    
T  26660138 aataccgggttcgatttccacggggaacaacatttgatcagtacgcatgcctctacgcatgagccggattagtc-gccacctttggtgggtcggaaaccg 26660236  T
Q  175 gtgc 178  Q
    ||||    
T  26660237 gtgc 26660240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 108 - 182
Target Start/End: Original strand, 10336549 - 10336623
Alignment:
Q  108 ttgaccagtgcacatgcctctacgtacgagccggattagacatccatatttgatgggtcggaaaccggtgcaaaa 182  Q
    ||||||||||| |||||||||||| | |||||||||||  | ||||  |||||||| ||| |||||| |||||||    
T  10336549 ttgaccagtgcgcatgcctctacgcatgagccggattaatcgtccacctttgatggatcgaaaaccgatgcaaaa 10336623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 108 - 145
Target Start/End: Complemental strand, 18649427 - 18649390
Alignment:
Q  108 ttgaccagtgcacatgcctctacgtacgagccggatta 145  Q
    ||||||||||| |||||||||||||||||||| |||||    
T  18649427 ttgaccagtgcgcatgcctctacgtacgagccagatta 18649390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 20 - 56
Target Start/End: Complemental strand, 33418279 - 33418243
Alignment:
Q  20 aaccaagttgtttgggctccactagcaaggagctcct 56  Q
    ||||||||||||||||||||| | |||||||||||||    
T  33418279 aaccaagttgtttgggctccagtggcaaggagctcct 33418243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 64; Significance: 9e-28; HSPs: 34)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 20 - 178
Target Start/End: Original strand, 45877397 - 45877556
Alignment:
Q  20 aaccaagttgtttgggctccactagcaaggagctcctaacaaggatgtatccaagaaataccgggttcgacttcca-gggaaaaaatatttgaccagtgc 118  Q
    ||||||||||||||||||||| | ||||||||| |||  |||||| ||||||  | |||||||||||||| ||||| |||||| || | ||| |||||||    
T  45877397 aaccaagttgtttgggctccagtggcaaggagccccttccaaggacgtatccggggaataccgggttcgatttccaggggaaacaacacttggccagtgc 45877496  T
Q  119 acatgcctctacgtacgagccggattagacatccatatttgatgggtcggaaaccggtgc 178  Q
    ||||||||||||| | |||||||||||| | | ||   ||||||||||||||||||||||    
T  45877497 acatgcctctacgcatgagccggattagtcgttcaccattgatgggtcggaaaccggtgc 45877556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 20 - 178
Target Start/End: Original strand, 15320129 - 15320288
Alignment:
Q  20 aaccaagttgtttgggctccactagcaaggagctcctaacaaggatgtatccaagaaataccgggttcgacttccagg-gaaaaaatatttgaccagtgc 118  Q
    ||||||||||||||| ||||| | |||||||||||||  |||||| ||| ||  | |||||||||||||| ||| ||| | || |||  ||| ||||||     
T  15320129 aaccaagttgtttggactccagtggcaaggagctccttccaaggacgtacccggggaataccgggttcgatttcgaggaggaacaatgattggccagtgt 15320228  T
Q  119 acatgcctctacgtacgagccggattagacatccatatttgatgggtcggaaaccggtgc 178  Q
     |||||||||||| |||||||||||||| |  |||  |||| |||||| |||||||||||    
T  15320229 gcatgcctctacgcacgagccggattagtcgcccacctttggtgggtcagaaaccggtgc 15320288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 20 - 174
Target Start/End: Original strand, 29127862 - 29128017
Alignment:
Q  20 aaccaagttgtttgggctccactagcaaggagctcctaacaaggatgtatccaagaaataccgggttcgacttccaggga-aaaaatatttgaccagtgc 118  Q
    ||||||||||||||||||||| | |||||||| ||||  |||||| |||||   | |||| ||||||||| ||||||||| || || | |||  ||||||    
T  29127862 aaccaagttgtttgggctccagtggcaaggagatccttccaaggacgtatctggggaatatcgggttcgatttccagggagaacaacacttggtcagtgc 29127961  T
Q  119 acatgcctctacgtacgagccggattagacatccatatttgatgggtcggaaaccg 174  Q
     |||||||||||| | |||||||||||| |  |||  |||| ||||||||||||||    
T  29127962 gcatgcctctacgcatgagccggattagtcgcccacctttggtgggtcggaaaccg 29128017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 20 - 178
Target Start/End: Original strand, 25294903 - 25295062
Alignment:
Q  20 aaccaagttgtttgggctccactagcaaggagctcctaacaaggatgtatccaagaaataccgggttcgact-tccagggaaaaaatatttgaccagtgc 118  Q
    |||||||||| |||||||||| | |||||||||||||  |||||| ||||||  | ||||||||||| || | ||  |||||| || | ||| |||||||    
T  25294903 aaccaagttgcttgggctccagtggcaaggagctccttccaaggacgtatccggggaataccgggtttgattctctggggaaacaacacttggccagtgc 25295002  T
Q  119 acatgcctctacgtacgagccggattagacatccatatttgatgggtcggaaaccggtgc 178  Q
     |||||||||| | | |||||||||||| | ||||   ||| ||||| ||||||||||||    
T  25295003 gcatgcctctatgcatgagccggattagtcgtccaccattggtgggttggaaaccggtgc 25295062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 20 - 178
Target Start/End: Complemental strand, 26207965 - 26207806
Alignment:
Q  20 aaccaagttgtttgggctccactagcaaggagctcctaacaaggatgtatccaagaaataccgggttcgacttcca-gggaaaaaatatttgaccagtgc 118  Q
    |||||||||| |||||||||| | |||||||||||||  |||||||||| ||  | |||||||||||||| | ||| ||| || ||   ||| ||||||     
T  26207965 aaccaagttgcttgggctccagtggcaaggagctccttccaaggatgtacccggggaataccgggttcgattcccacggggaacaacgcttgtccagtgt 26207866  T
Q  119 acatgcctctacgtacgagccggattagacatccatatttgatgggtcggaaaccggtgc 178  Q
     |||||||||||| | |||||||||||| |  ||||  ||  ||||||||||||||||||    
T  26207865 gcatgcctctacgcatgagccggattagtcggccattattagtgggtcggaaaccggtgc 26207806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 19 - 178
Target Start/End: Original strand, 7650169 - 7650329
Alignment:
Q  19 caaccaagttgtttgggctccactagcaaggagctcctaacaaggatgtatccaagaaataccgggttcgacttccagggaaaa-aatatttgaccagtg 117  Q
    ||||||||||||||||| |||| | |||||||| ||||  ||||||||||   | | |||||||||||||| ||||||||  || || | ||| |||||     
T  7650169 caaccaagttgtttgggttccagtggcaaggagttcctttcaaggatgtacttagggaataccgggttcgatttccagggggaacaacacttggccagta 7650268  T
Q  118 cacatgcctctacgtacgagccggattagacatccatatttgatgggtcggaaaccggtgc 178  Q
    |  ||| ||||||| |||||||||||||| |  |||  |||| ||||| ||||||||||||    
T  7650269 cgaatgtctctacgcacgagccggattagtcgcccacctttggtgggttggaaaccggtgc 7650329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 114 - 178
Target Start/End: Original strand, 47219182 - 47219246
Alignment:
Q  114 agtgcacatgcctctacgtacgagccggattagacatccatatttgatgggtcggaaaccggtgc 178  Q
    ||||| |||||||||||| | |||||||||||| | ||||  |||||||||||||||||||||||    
T  47219182 agtgcgcatgcctctacgcatgagccggattagtcgtccacctttgatgggtcggaaaccggtgc 47219246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 20 - 146
Target Start/End: Complemental strand, 32873712 - 32873586
Alignment:
Q  20 aaccaagttgtttgggctccactagcaaggagctcctaacaaggatgtatccaagaaataccgggttcgacttccagggaaaa-aatatttgaccagtgc 118  Q
    ||||||||||||||||||||| | ||||||||||| |  |||||| ||| ||  ||| |||| ||||||| | | ||||| || ||   |||||||||||    
T  32873712 aaccaagttgtttgggctccagtggcaaggagctcattccaaggacgtacccgggaa-taccaggttcgattcctagggagaacaacgcttgaccagtgc 32873614  T
Q  119 acatgcctctacgtacgagccggattag 146  Q
    ||||||||||||||| ||||| ||||||    
T  32873613 acatgcctctacgtatgagccagattag 32873586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 19 - 146
Target Start/End: Complemental strand, 47749269 - 47749142
Alignment:
Q  19 caaccaagttgtttgggctccactagcaaggagctcctaacaaggatgtatccaagaaataccgggttcgacttccagggaaaaaatatttgaccagtgc 118  Q
    ||||||| |||||||||||||| | | || ||||| ||  |||||| ||||||| | |||||||||||||| | | |||| || ||   ||| |||||||    
T  47749269 caaccaaattgtttgggctccagtggtaatgagcttcttccaaggacgtatccagggaataccgggttcgattcctaggggaacaactcttggccagtgc 47749170  T
Q  119 acatgcctctacgtacgagccggattag 146  Q
     |||||||||||| |||||||| |||||    
T  47749169 gcatgcctctacgcacgagccgaattag 47749142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 20 - 178
Target Start/End: Original strand, 54261169 - 54261328
Alignment:
Q  20 aaccaagttgtttgggctccactagcaaggagctcctaacaaggatgtatccaagaaataccgggttcgacttccagg-gaaaaaatatttgaccagtgc 118  Q
    ||||||||||||||||||||| | |||||||||||||  |||||| ||| |   | |||||||||||||| | | ||| | || ||   ||| |||||||    
T  54261169 aaccaagttgtttgggctccagtggcaaggagctccttccaaggacgtacctggggaataccgggttcgattcctaggaggaacaacgcttggccagtgc 54261268  T
Q  119 acatgcctctacgtacgagccggattagacatccatatttgatgggtcggaaaccggtgc 178  Q
     |||||||||||| | |||||||||||| | | ||  |||  ||||||||||||||||||    
T  54261269 gcatgcctctacgcatgagccggattagtcgttcacctttagtgggtcggaaaccggtgc 54261328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 107 - 182
Target Start/End: Complemental strand, 55069755 - 55069680
Alignment:
Q  107 tttgaccagtgcacatgcctctacgtacgagccggattagacatccatatttgatgggtcggaaaccggtgcaaaa 182  Q
    |||| |||||||||||||||||||| |||||||||||||  |   ||  |||| ||||||||||||||||||||||    
T  55069755 tttggccagtgcacatgcctctacgcacgagccggattaatcgctcacctttggtgggtcggaaaccggtgcaaaa 55069680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 24 - 178
Target Start/End: Complemental strand, 3136853 - 3136699
Alignment:
Q  24 aagttgtttgggctccactagcaaggagctcctaacaaggatgtatccaagaaataccgggttcgacttccagggaaaaaatatttgaccagtgcacatg 123  Q
    ||||||||||||||||  | ||||| |||||||  |||||| ||| ||  | |||||||| ||||| || ||||| || || | |||  |||||| ||||    
T  3136853 aagttgtttgggctcccgtggcaagaagctcctttcaaggacgtacccggggaataccggattcgattttcaggggaacaacacttgggcagtgcgcatg 3136754  T
Q  124 cctctacgtacgagccggattagacatccatatttgatgggtcggaaaccggtgc 178  Q
    |||||||| | ||| |||||||| | ||||  |||| | ||||||||||||||||    
T  3136753 cctctacgcatgagtcggattagtcgtccacctttggttggtcggaaaccggtgc 3136699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 20 - 98
Target Start/End: Original strand, 10855327 - 10855405
Alignment:
Q  20 aaccaagttgtttgggctccactagcaaggagctcctaacaaggatgtatccaagaaataccgggttcgacttccaggg 98  Q
    ||||||||||||||||||||| | |||||||||||||  ||||||||||     ||||||||||||| || ||||||||    
T  10855327 aaccaagttgtttgggctccagtggcaaggagctccttccaaggatgtacttgggaaataccgggtttgatttccaggg 10855405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 20 - 98
Target Start/End: Original strand, 13893869 - 13893947
Alignment:
Q  20 aaccaagttgtttgggctccactagcaaggagctcctaacaaggatgtatccaagaaataccgggttcgacttccaggg 98  Q
    ||||||||||||||||||||| | |||||||||||||  |||||| || |||  | ||||||||||| || ||||||||    
T  13893869 aaccaagttgtttgggctccagtggcaaggagctccttccaaggacgtgtccggggaataccgggttggatttccaggg 13893947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 20 - 174
Target Start/End: Original strand, 47471775 - 47471929
Alignment:
Q  20 aaccaagttgtttgggctccactagcaaggagctcctaacaaggatgtatccaagaaataccgggttcgacttccagggaaaaaatatttgaccagtgca 119  Q
    |||||||||| |||||||| | | |||| ||||||||  |||||| ||| | | | |||||||||||||| | |||||| || |||  ||| | |||||     
T  47471775 aaccaagttgcttgggctctagtggcaaagagctccttccaaggacgtacctagggaataccgggttcgattcccaggggaacaatgcttggctagtgcg 47471874  T
Q  120 catgcctctacgtacgagccggattagacatccatatttgatgggtcggaaaccg 174  Q
    ||||| |||||| | |||||| ||||| | ||||  |||| ||||||||||||||    
T  47471875 catgcttctacgcatgagccgaattagtcgtccacctttggtgggtcggaaaccg 47471929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 108 - 182
Target Start/End: Complemental strand, 50405678 - 50405604
Alignment:
Q  108 ttgaccagtgcacatgcctctacgtacgagccggattagacatccatatttgatgggtcggaaaccggtgcaaaa 182  Q
    ||||||||||| |||||||||||| ||||| |||||||| |  |||   ||| ||||||||||||||||||||||    
T  50405678 ttgaccagtgcgcatgcctctacgcacgagtcggattagtcgcccaccattggtgggtcggaaaccggtgcaaaa 50405604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 20 - 176
Target Start/End: Original strand, 29135856 - 29136013
Alignment:
Q  20 aaccaagttgtttgggctccactagcaaggagctcctaacaaggatgtatccaagaaataccgggttcgacttccagggaaaa-aatatttgaccagtgc 118  Q
    |||||| ||| |||||||||| | |||||||||| ||  |||||| ||||||  | |||||||| ||||| | ||||||  || || | ||| |||||||    
T  29135856 aaccaaattgcttgggctccagtggcaaggagcttcttccaaggacgtatccggggaataccggattcgattcccagggggaacaacacttggccagtgc 29135955  T
Q  119 acatgcctctacgtacgagccggattagacatccatatttgatgggtcggaaaccggt 176  Q
     |||||||||||| | |||||||||||| | ||||   ||| ||||| ||||||||||    
T  29135956 gcatgcctctacgcatgagccggattagtcttccaccattggtgggttggaaaccggt 29136013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 24 - 172
Target Start/End: Complemental strand, 30767407 - 30767258
Alignment:
Q  24 aagttgtttgggctccactagcaaggagctcctaacaaggatgtatccaagaaataccgggttcgacttccagggaaaa-aatatttgaccagtgcacat 122  Q
    |||||| |||||||||| | |||||||| ||||  |||||||||| |   | |||| ||||||||| ||||||||  || || | ||| ||||||  |||    
T  30767407 aagttgcttgggctccagtggcaaggagttccttccaaggatgtacctggggaatatcgggttcgatttccagggggaacaacacttggccagtgtgcat 30767308  T
Q  123 gcctctacgtacgagccggattagacatccatatttgatgggtcggaaac 172  Q
    ||||||||| |||||||||||||| |  |||  |||| ||||||||||||    
T  30767307 gcctctacgcacgagccggattagtcgcccacctttggtgggtcggaaac 30767258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 20 - 172
Target Start/End: Original strand, 33251605 - 33251758
Alignment:
Q  20 aaccaagttgtttgggctccactagcaaggagctcctaacaaggatgtatccaagaaataccgggttcgacttccag-ggaaaaaatatttgaccagtgc 118  Q
    ||||||||||||||||||||  | |||| ||||||||  |||||| ||||    | |||||||||||||| | || | || || ||  |||| ||||||     
T  33251605 aaccaagttgtttgggctccggtggcaatgagctccttccaaggacgtattaggggaataccgggttcgattcccggtgggaacaacgtttggccagtgt 33251704  T
Q  119 acatgcctctacgtacgagccggattagacatccatatttgatgggtcggaaac 172  Q
     |||||||||||| | |||||||||||| | |||| ||||||||||||| ||||    
T  33251705 gcatgcctctacgcatgagccggattagtcgtccacatttgatgggtcgaaaac 33251758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 20 - 89
Target Start/End: Complemental strand, 42412938 - 42412869
Alignment:
Q  20 aaccaagttgtttgggctccactagcaaggagctcctaacaaggatgtatccaagaaataccgggttcga 89  Q
    |||||||||| |||||||||| | |||||||||||||  |||||| ||||||  | ||||||||||||||    
T  42412938 aaccaagttgcttgggctccaatggcaaggagctccttccaaggacgtatccggggaataccgggttcga 42412869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 20 - 178
Target Start/End: Original strand, 928543 - 928702
Alignment:
Q  20 aaccaagttgtttgggctccactagcaaggagctcctaacaaggatgtatccaagaaataccgggttcgacttccagggaaaa-aatatttgaccagtgc 118  Q
    ||||||||||||| ||||| ||| ||||||||||| |  |||||| ||| | | | |||||| | ||||| |  |||||  || || | |||||||||||    
T  928543 aaccaagttgtttaggctcaactggcaaggagctcattccaaggacgtacctagggaataccagattcgattctcagggggaacaacacttgaccagtgc 928642  T
Q  119 acatgcctctacgtacgagccggattagacatccatatttgatgggtcggaaaccggtgc 178  Q
     |||||| ||||| |||||||||||||| ||||||  |||| || |||| ||| ||||||    
T  928643 gcatgccgctacgcacgagccggattagtcatccacctttggtgagtcgaaaatcggtgc 928702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 24 - 83
Target Start/End: Complemental strand, 22405703 - 22405644
Alignment:
Q  24 aagttgtttgggctccactagcaaggagctcctaacaaggatgtatccaagaaataccgg 83  Q
    ||||||||||||||||| | |||||||||||||| ||| || ||||||  ||||||||||    
T  22405703 aagttgtttgggctccagtggcaaggagctcctaccaatgacgtatccgtgaaataccgg 22405644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 107 - 178
Target Start/End: Original strand, 23511598 - 23511669
Alignment:
Q  107 tttgaccagtgcacatgcctctacgtacgagccggattagacatccatatttgatgggtcggaaaccggtgc 178  Q
    |||||||||||| |||||||||||| | ||| |||||||  | ||||  |||||||||||| ||||||||||    
T  23511598 tttgaccagtgcgcatgcctctacgcatgagtcggattaatcgtccacctttgatgggtcgaaaaccggtgc 23511669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 20 - 178
Target Start/End: Complemental strand, 29762319 - 29762160
Alignment:
Q  20 aaccaagttgtttgggctccactagcaaggagctcctaacaaggatgtatccaagaaataccgggttcgact-tccagggaaaaaatatttgaccagtgc 118  Q
    |||||||||| |||||||||| | |||||||||||||  ||||||||||| |  | |||| ||||| ||| | ||  ||| || || | ||| |||||||    
T  29762319 aaccaagttgcttgggctccagtggcaaggagctccttccaaggatgtattcggggaatatcgggtccgattctcaggggcaacaacacttggccagtgc 29762220  T
Q  119 acatgcctctacgtacgagccggattagacatccatatttgatgggtcggaaaccggtgc 178  Q
     |||||||||| | | |||| ||||||| | ||||   ||| ||||||||||||||||||    
T  29762219 gcatgcctctatgcatgagctggattagtcgtccaccattggtgggtcggaaaccggtgc 29762160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 112 - 178
Target Start/End: Complemental strand, 3507604 - 3507538
Alignment:
Q  112 ccagtgcacatgcctctacgtacgagccggattagacatccatatttgatgggtcggaaaccggtgc 178  Q
    ||||||| |||||||||||| |||||||||||||| |   ||  |||| ||||||||||||||||||    
T  3507604 ccagtgcgcatgcctctacgcacgagccggattagtcgctcacctttggtgggtcggaaaccggtgc 3507538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 124 - 182
Target Start/End: Original strand, 19873420 - 19873478
Alignment:
Q  124 cctctacgtacgagccggattagacatccatatttgatgggtcggaaaccggtgcaaaa 182  Q
    |||||||| |||||||||||||| | ||||| |||  |||||||||||| |||||||||    
T  19873420 cctctacgcacgagccggattagtcgtccatcttttgtgggtcggaaactggtgcaaaa 19873478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 120 - 178
Target Start/End: Complemental strand, 28572274 - 28572216
Alignment:
Q  120 catgcctctacgtacgagccggattagacatccatatttgatgggtcggaaaccggtgc 178  Q
    |||||||||||| |||||||||||||| |  |||  |||| ||||||||||||||||||    
T  28572274 catgcctctacgcacgagccggattagtcgcccacctttggtgggtcggaaaccggtgc 28572216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 107 - 181
Target Start/End: Complemental strand, 35923699 - 35923625
Alignment:
Q  107 tttgaccagtgcacatgcctctacgtacgagccggattagacatccatatttgatgggtcggaaaccggtgcaaa 181  Q
    |||| ||||||| |||||||||| | ||||| || ||||| | ||||| |||||||| ||| |||||||||||||    
T  35923699 tttggccagtgcgcatgcctctaagcacgagtcgaattagtcgtccatctttgatggatcgaaaaccggtgcaaa 35923625  T

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Target: chr3; HSP #29
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 108 - 146
Target Start/End: Complemental strand, 43330807 - 43330769
Alignment:
Q  108 ttgaccagtgcacatgcctctacgtacgagccggattag 146  Q
    ||||||||||| |||||||||||| ||||||||||||||    
T  43330807 ttgaccagtgcgcatgcctctacgcacgagccggattag 43330769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 19 - 89
Target Start/End: Complemental strand, 46530035 - 46529965
Alignment:
Q  19 caaccaagttgtttgggctccactagcaaggagctcctaacaaggatgtatccaagaaataccgggttcga 89  Q
    |||||||||||||||||||||| | |||||||||||||  |||||| ||| |   | ||||||||||||||    
T  46530035 caaccaagttgtttgggctccagtggcaaggagctcctttcaaggacgtacctggggaataccgggttcga 46529965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 112 - 178
Target Start/End: Complemental strand, 49021274 - 49021208
Alignment:
Q  112 ccagtgcacatgcctctacgtacgagccggattagacatccatatttgatgggtcggaaaccggtgc 178  Q
    ||||||| |||||||||||| | |||||||||||| | ||||   ||| ||||||||||||||||||    
T  49021274 ccagtgcgcatgcctctacgcatgagccggattagtcgtccaccattggtgggtcggaaaccggtgc 49021208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 120 - 182
Target Start/End: Complemental strand, 50753404 - 50753342
Alignment:
Q  120 catgcctctacgtacgagccggattagacatccatatttgatgggtcggaaaccggtgcaaaa 182  Q
    |||||||||||| ||||| |||||||| | | |||  ||| ||||||||||||||||||||||    
T  50753404 catgcctctacgcacgagtcggattagtcgttcatcattggtgggtcggaaaccggtgcaaaa 50753342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 120 - 177
Target Start/End: Complemental strand, 26362030 - 26361973
Alignment:
Q  120 catgcctctacgtacgagccggattagacatccatatttgatgggtcggaaaccggtg 177  Q
    |||||||||||| |||||||||||||| |   ||  ||||||||||||||||||||||    
T  26362030 catgcctctacgcacgagccggattagtcgcacacctttgatgggtcggaaaccggtg 26361973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 20 - 56
Target Start/End: Original strand, 48341963 - 48341999
Alignment:
Q  20 aaccaagttgtttgggctccactagcaaggagctcct 56  Q
    ||||||||||||||||||||| | |||||||||||||    
T  48341963 aaccaagttgtttgggctccagtggcaaggagctcct 48341999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 57; Significance: 1e-23; HSPs: 31)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 23 - 182
Target Start/End: Original strand, 1797409 - 1797569
Alignment:
Q  23 caagttgtttgggctccactagcaaggagctcctaacaaggatgtatccaagaaataccgggttcgacttcca-gggaaaaaatatttgaccagtgcaca 121  Q
    ||||||| |||||||||| | |||||||||||||  |||||| |||||| || |||||||||||||| | ||| |||||| ||   ||| ||||||| ||    
T  1797409 caagttgcttgggctccagtggcaaggagctccttccaaggacgtatccgaggaataccgggttcgattcccaggggaaacaacgcttggccagtgcgca 1797508  T
Q  122 tgcctctacgtacgagccggattagacatccatatttgatgggtcggaaaccggtgcaaaa 182  Q
    || ||||||| |||||||||| ||| | ||||| |||||||| ||| ||||||||||||||    
T  1797509 tgtctctacgcacgagccggactagtcgtccatctttgatggatcgaaaaccggtgcaaaa 1797569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 20 - 178
Target Start/End: Original strand, 48804629 - 48804788
Alignment:
Q  20 aaccaagttgtttgggctccactagcaaggagctcctaacaaggatgtatccaagaaataccgggttcgacttcc-agggaaaaaatatttgaccagtgc 118  Q
    |||||||||| |||||||||| | |||||||||||||  |||||| ||||||  | |||||||||||||| | || |||| || || | ||| |||||||    
T  48804629 aaccaagttgcttgggctccagtggcaaggagctccttccaaggacgtatccggggaataccgggttcgattcccaaggggaacaacacttggccagtgc 48804728  T
Q  119 acatgcctctacgtacgagccggattagacatccatatttgatgggtcggaaaccggtgc 178  Q
     |||||||||||| | |||||||||||| | ||||   ||| ||||||||||||||||||    
T  48804729 gcatgcctctacgcatgagccggattagtcgtccaccattggtgggtcggaaaccggtgc 48804788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 20 - 146
Target Start/End: Complemental strand, 4228914 - 4228790
Alignment:
Q  20 aaccaagttgtttgggctccactagcaaggagctcctaacaaggatgtatccaagaaataccgggttcgacttccagggaaaaaatatttgaccagtgca 119  Q
    |||||||||||||||||||||   |||||||||||||  |||||| |||||| || |||||| ||||||| |||||||  || ||  |||| ||||||||    
T  4228914 aaccaagttgtttgggctccagcggcaaggagctccttccaaggacgtatccgaggaataccaggttcgatttccagg--aacaacgtttggccagtgca 4228817  T
Q  120 catgcctctacgtacgagccggattag 146  Q
    |||||| ||||| | ||||||||||||    
T  4228816 catgcccctacgcatgagccggattag 4228790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 22 - 146
Target Start/End: Original strand, 34659174 - 34659299
Alignment:
Q  22 ccaagttgtttgggctccactagcaaggagctcctaacaaggatgtatccaagaaataccgggttcgact-tccagggaaaaaatatttgaccagtgcac 120  Q
    ||||||||||||||||||| | |||||||||||||  || ||||||| ||  | |||||||||||||| | || |||| || ||   ||||||||||| |    
T  34659174 ccaagttgtttgggctccagtggcaaggagctccttccagggatgtacccggggaataccgggttcgattctcaaggggaacaacgcttgaccagtgcgc 34659273  T
Q  121 atgcctctacgtacgagccggattag 146  Q
    ||||||||||| ||||||||||||||    
T  34659274 atgcctctacgcacgagccggattag 34659299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 19 - 146
Target Start/End: Complemental strand, 4195366 - 4195238
Alignment:
Q  19 caaccaagttgtttgggctccactagcaaggagctcctaacaaggatgtatccaagaaataccgggttcgacttccagg-gaaaaaatatttgaccagtg 117  Q
    ||||||||||| |||||||||| | |||||||||||||  |||||| ||||||  | ||||||| |||||| ||||||| | || || ||||| | ||||    
T  4195366 caaccaagttgcttgggctccagtggcaaggagctcctgccaaggacgtatccggggaataccgagttcgatttccaggaggaacaacatttggctagtg 4195267  T
Q  118 cacatgcctctacgtacgagccggattag 146  Q
    | |||||||||||| | ||||||||||||    
T  4195266 cgcatgcctctacgcatgagccggattag 4195238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 19 - 178
Target Start/End: Original strand, 3353370 - 3353529
Alignment:
Q  19 caaccaagttgtttgggctccactagcaaggagctcctaacaaggatgtatccaagaaataccgggttcgacttccagggaaaaaatatttgaccagtgc 118  Q
    ||||||| ||| |||| || || | ||||||||||| | | ||||| ||||| | | |||| |||| |||| |  |||||||| || ||||| |||||||    
T  3353370 caaccaaattgcttggcctgcagtggcaaggagctcattataaggacgtatctagggaatatcgggatcgattctcagggaaacaacatttggccagtgc 3353469  T
Q  119 acatgcctctacgtacgagccggattagacatccatatttgatgggtcggaaaccggtgc 178  Q
     |||||||||||| |||||||||||||| | ||||  |||||||| || |||||||||||    
T  3353470 gcatgcctctacgcacgagccggattagtcgtccacctttgatggatcagaaaccggtgc 3353529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 20 - 174
Target Start/End: Complemental strand, 17748545 - 17748390
Alignment:
Q  20 aaccaagttgtttgggctccactagcaaggagctcctaacaaggatgtatccaagaaataccgggttcgacttccagggaaaa-aatatttgaccagtgc 118  Q
    ||||||||||||||||||| | | ||||| |||| ||  |||||| |||| |  | |||||||||||||| | ||||||  || ||   ||| |||||||    
T  17748545 aaccaagttgtttgggctctagtggcaagcagcttcttccaaggacgtattcggggaataccgggttcgattcccagggggaacaacgcttggccagtgc 17748446  T
Q  119 acatgcctctacgtacgagccggattagacatccatatttgatgggtcggaaaccg 174  Q
     ||||||||||||||||||||||||||| | ||||  |||| ||||||||||||||    
T  17748445 gcatgcctctacgtacgagccggattagtcgtccacctttgttgggtcggaaaccg 17748390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 20 - 146
Target Start/End: Complemental strand, 26423450 - 26423323
Alignment:
Q  20 aaccaagttgtttgggctccactagcaaggagctcctaacaaggatgtatccaagaaataccgggttcgacttcca-gggaaaaaatatttgaccagtgc 118  Q
    ||||||||||||||||||||| | ||||| | |||||  |||||| ||| ||||| |||||||||||||| | ||| |||||| ||   ||| |||||||    
T  26423450 aaccaagttgtttgggctccagtggcaagaaactccttccaaggacgtacccaaggaataccgggttcgattcccaggggaaacaacgcttggccagtgc 26423351  T
Q  119 acatgcctctacgtacgagccggattag 146  Q
    || |||||||||| ||||||| ||||||    
T  26423350 acctgcctctacgcacgagccagattag 26423323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 19 - 178
Target Start/End: Complemental strand, 43346943 - 43346783
Alignment:
Q  19 caaccaagttgtttgggctccactagcaaggagctcctaacaaggatgtatccaagaaataccgggttcgact-tccagggaaaaaatatttgaccagtg 117  Q
    |||||||||||||||| ||||| | |||||||||||||  ||| || |||||   | |||||||||||| | | || |||| || || | ||| || |||    
T  43346943 caaccaagttgtttggactccagtggcaaggagctccttccaaagacgtatctggggaataccgggttcaattctcaaggggaacaacacttggccggtg 43346844  T
Q  118 cacatgcctctacgtacgagccggattagacatccatatttgatgggtcggaaaccggtgc 178  Q
    | ||||||||||||||||||||||||||| |   ||| |||| ||||||||||||| ||||    
T  43346843 cgcatgcctctacgtacgagccggattagtcgctcatctttggtgggtcggaaaccagtgc 43346783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 20 - 182
Target Start/End: Original strand, 13095804 - 13095967
Alignment:
Q  20 aaccaagttgtttgggctccactagcaaggagctcctaacaaggatgtatccaagaaataccgggttcgacttcca-gggaaaaaatatttgaccagtgc 118  Q
    |||||||||| |||||||||  | |||||||||||||  |||||| ||| ||  | |||||||||||| | | ||| ||| || || | ||| |||||||    
T  13095804 aaccaagttgcttgggctcccgtggcaaggagctcctttcaaggacgtacccggggaataccgggttctattcccagggggaacaacacttggccagtgc 13095903  T
Q  119 acatgcctctacgtacgagccggattagacatccatatttgatgggtcggaaaccggtgcaaaa 182  Q
     |||||||||||| | |||||||||||| |   ||  |||| ||||||||||||||||||||||    
T  13095904 gcatgcctctacgcatgagccggattagtcgctcacctttggtgggtcggaaaccggtgcaaaa 13095967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 23 - 178
Target Start/End: Complemental strand, 24969484 - 24969330
Alignment:
Q  23 caagttgtttgggctccactagcaaggagctcctaacaaggatgtatccaagaaataccgggttcgacttccagggaaaaaatatttgaccagtgcacat 122  Q
    |||||||||||||||||| | ||||||||||  |  |||||| |||||    ||||||||||||||| |||||||| || || | ||| ||||||| | |    
T  24969484 caagttgtttgggctccagtggcaaggagcttttttcaaggacgtatctggaaaataccgggttcgatttccaggg-aacaacacttggccagtgcgcgt 24969386  T
Q  123 gcctctacgtacgagccggattagacatccatatttgatgggtcggaaaccggtgc 178  Q
    |||||||||||| || |||||||  |   ||| |||||||| ||||||||||||||    
T  24969385 gcctctacgtacaagtcggattaatcgctcatctttgatggctcggaaaccggtgc 24969330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 20 - 174
Target Start/End: Complemental strand, 42210425 - 42210270
Alignment:
Q  20 aaccaagttgtttgggctccactagcaaggagctcctaacaaggatgtatccaagaaataccgggttcgacttccagggaaaa-aatatttgaccagtgc 118  Q
    |||||||||| || | ||||| | ||||||||||| |  |||||| |||||| || |||||||| ||||| | |||| ||||| ||  |||| |||||||    
T  42210425 aaccaagttgcttagactccagtggcaaggagctctttccaaggacgtatccgaggaataccggcttcgattcccagtgaaaacaacgtttggccagtgc 42210326  T
Q  119 acatgcctctacgtacgagccggattagacatccatatttgatgggtcggaaaccg 174  Q
     |||||||||||| |||||||||||||  || |||   ||| ||||||||||||||    
T  42210325 gcatgcctctacgcacgagccggattaatcacccaccgttggtgggtcggaaaccg 42210270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 20 - 178
Target Start/End: Original strand, 22573759 - 22573917
Alignment:
Q  20 aaccaagttgtttgggctccactagcaaggagctcctaacaaggatgtatccaagaaataccgggttcgacttccagggaaaaaatatttgaccagtgca 119  Q
    |||||||||| |||||||||| ||||||| |||| ||  ||| ||| |||    | |||| ||||||||| || ||||| || || |||||||||||||     
T  22573759 aaccaagttgcttgggctccagtagcaagaagcttcttccaaagatatattgggggaatatcgggttcgattttcaggggaacaacatttgaccagtgcg 22573858  T
Q  120 catgcctctacgtacgagccggattagacatccatatttgatgggtcggaaaccggtgc 178  Q
    ||||||| |||| | |||||||||||  | |||||  ||||||||| | ||||||||||    
T  22573859 catgcctttacgcatgagccggattaatcgtccatcattgatgggttgaaaaccggtgc 22573917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 20 - 146
Target Start/End: Complemental strand, 4973273 - 4973146
Alignment:
Q  20 aaccaagttgtttgggctccactagcaaggagctcctaacaaggatgtatccaagaaataccgggttcgacttcca-gggaaaaaatatttgaccagtgc 118  Q
    |||||||||||||||||||||||  ||||||||| ||  ||||||  ||| |  | |||| ||||||||| | | | ||| || || | ||||||| |||    
T  4973273 aaccaagttgtttgggctccactgacaaggagcttcttccaaggacttattcggggaatatcgggttcgattcctacggggaataacacttgaccaatgc 4973174  T
Q  119 acatgcctctacgtacgagccggattag 146  Q
     |||||||||||||||||||||||||||    
T  4973173 gcatgcctctacgtacgagccggattag 4973146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 24 - 182
Target Start/End: Original strand, 23658130 - 23658288
Alignment:
Q  24 aagttgtttgggctccactagcaaggagctcctaacaaggatgtatccaagaaataccgggttcgacttccagggaaaa-aatatttgaccagtgcacat 122  Q
    ||||||||||||||||| | |||||||||||||  |||||| ||| ||| | |||| |  |||||| ||||||||  || ||   ||| ||||||  |||    
T  23658130 aagttgtttgggctccagtggcaaggagctcctt-caaggacgtacccagggaatatccagttcgatttccagggggaacaacgcttggccagtgtgcat 23658228  T
Q  123 gcctctacgtacgagccggattagacatccatatttgatgggtcggaaaccggtgcaaaa 182  Q
    ||||||||  |||||||||||||| | ||||| |||| |||||| |||||| ||||||||    
T  23658229 gcctctacacacgagccggattagtcgtccatctttggtgggtcagaaacctgtgcaaaa 23658288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 24 - 174
Target Start/End: Original strand, 42032046 - 42032197
Alignment:
Q  24 aagttgtttgggctccactagcaaggagctcctaacaaggatgtatccaagaaataccgggttcgacttcca-gggaaaaaatatttgaccagtgcacat 122  Q
    ||||||||||||||||| ||||||| |||||||  |||||| ||| ||  | |||||| ||||||| | ||| ||| || ||  |||| |||||||||||    
T  42032046 aagttgtttgggctccagtagcaagaagctccttccaaggacgtacccggggaatacctggttcgattcccacggggaacaacgtttggccagtgcacat 42032145  T
Q  123 gcctctacgtacgagccggattagacatccatatttgatgggtcggaaaccg 174  Q
     | |||||| | |||||| |||||   ||||  |||||||||||||||||||    
T  42032146 acatctacgcatgagccgaattagttgtccacctttgatgggtcggaaaccg 42032197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 120 - 178
Target Start/End: Original strand, 48551904 - 48551962
Alignment:
Q  120 catgcctctacgtacgagccggattagacatccatatttgatgggtcggaaaccggtgc 178  Q
    |||||||||||||| |||||||||||| | ||||  |||||||| ||||||||||||||    
T  48551904 catgcctctacgtatgagccggattagtcgtccacctttgatggatcggaaaccggtgc 48551962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 19 - 146
Target Start/End: Original strand, 43925457 - 43925585
Alignment:
Q  19 caaccaagttgtttgggctccactagcaaggagctcctaacaaggatgtatccaagaaataccgggttcgacttcca-gggaaaaaatatttgaccagtg 117  Q
    ||||||||||| |||||||||| | |||||||||||||  |||||| ||| ||  | |||||||||||||| | ||| ||| || || | |||  |||||    
T  43925457 caaccaagttgcttgggctccagtggcaaggagctccttccaaggacgtacccggggaataccgggttcgattcccagggggaacaacacttggtcagtg 43925556  T
Q  118 cacatgcctctacgtacgagccggattag 146  Q
    | |||||||||||| | |||| |||||||    
T  43925557 cgcatgcctctacgcatgagctggattag 43925585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 20 - 178
Target Start/End: Complemental strand, 10048039 - 10047880
Alignment:
Q  20 aaccaagttgtttgggctccactagcaaggagctcctaacaaggatgtatccaagaaataccgggttcgacttcca-gggaaaaaatatttgaccagtgc 118  Q
    |||||||||| |||  ||||| | |||||||||||||  |||||| ||||||  | |||||||||||||| | ||| ||| || || | ||| |||||||    
T  10048039 aaccaagttgcttgaactccagtggcaaggagctccttccaaggacgtatccggggaataccgggttcgattcccagggggaacaacacttggccagtgc 10047940  T
Q  119 acatgcctctacgtacgagccggattagacatccatatttgatgggtcggaaaccggtgc 178  Q
     || ||||||||| | |||| | ||||| | ||||   ||| ||||||||||||||||||    
T  10047939 gcaggcctctacgcatgagcagaattagtcgtccaccattggtgggtcggaaaccggtgc 10047880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 20 - 146
Target Start/End: Original strand, 14650263 - 14650390
Alignment:
Q  20 aaccaagttgtttgggctccactagcaaggagctcctaacaaggatgtatccaagaaataccgggttcgacttccagg-gaaaaaatatttgaccagtgc 118  Q
    ||||||||||||||| ||| | | |||||||||||||  |||||| ||| ||    |||| ||||||||| ||||||| | || |||  |||||||||||    
T  14650263 aaccaagttgtttggactctagtggcaaggagctccttccaaggacgtacccggagaatatcgggttcgatttccaggaggaacaatgcttgaccagtgc 14650362  T
Q  119 acatgcctctacgtacgagccggattag 146  Q
    | ||||||||||| | ||||||| ||||    
T  14650363 atatgcctctacgcatgagccgggttag 14650390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 20 - 178
Target Start/End: Complemental strand, 43862135 - 43861976
Alignment:
Q  20 aaccaagttgtttgggctccactagcaaggagctcctaacaaggatgtatccaagaaataccgggttcgacttccagggaaaa-aatatttgaccagtgc 118  Q
    ||||||||||||||||||| |   ||||||||||| |  ||| || |||||   | |||||||||||||| | ||||||  || ||  |||| |||||||    
T  43862135 aaccaagttgtttgggctctagcggcaaggagctctttccaaagacgtatctggggaataccgggttcgattcccagggggaacaacgtttggccagtgc 43862036  T
Q  119 acatgcctctacgtacgagccggattagacatccatatttgatgggtcggaaaccggtgc 178  Q
     |||||||||||| | |||||||||||| ||| ||  |||| ||| ||| ||||||||||    
T  43862035 gcatgcctctacgcatgagccggattagtcattcacctttggtggatcgaaaaccggtgc 43861976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 20 - 99
Target Start/End: Original strand, 45447916 - 45447995
Alignment:
Q  20 aaccaagttgtttgggctccactagcaaggagctcctaacaaggatgtatccaagaaataccgggttcgacttccaggga 99  Q
    |||||||||| ||||| || | | |||||||||||||  |||||| ||| || ||||||||| ||||||| |||||||||    
T  45447916 aaccaagttgcttgggttctagtggcaaggagctccttccaaggacgtacccgagaaataccaggttcgatttccaggga 45447995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 23 - 97
Target Start/End: Complemental strand, 5069975 - 5069901
Alignment:
Q  23 caagttgtttgggctccactagcaaggagctcctaacaaggatgtatccaagaaataccgggttcgacttccagg 97  Q
    |||||||||||||||||| | |||||||||| ||   ||||| ||| ||  |||||||||||||||| |||||||    
T  5069975 caagttgtttgggctccagtggcaaggagcttcttctaaggacgtacccgggaaataccgggttcgatttccagg 5069901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 112 - 178
Target Start/End: Complemental strand, 38578937 - 38578871
Alignment:
Q  112 ccagtgcacatgcctctacgtacgagccggattagacatccatatttgatgggtcggaaaccggtgc 178  Q
    ||||||| |||||||||||| | |||||||||||| |  |||  |||| ||||||||||||||||||    
T  38578937 ccagtgcgcatgcctctacgcatgagccggattagtcgcccacctttggtgggtcggaaaccggtgc 38578871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 112 - 182
Target Start/End: Original strand, 39420876 - 39420946
Alignment:
Q  112 ccagtgcacatgcctctacgtacgagccggattagacatccatatttgatgggtcggaaaccggtgcaaaa 182  Q
    ||||||| | |||||||||| | |||||||||||| | || |  ||||||||| |||||||||||||||||    
T  39420876 ccagtgcgcgtgcctctacgcatgagccggattagtcgtctacctttgatgggccggaaaccggtgcaaaa 39420946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 112 - 178
Target Start/End: Original strand, 41945512 - 41945578
Alignment:
Q  112 ccagtgcacatgcctctacgtacgagccggattagacatccatatttgatgggtcggaaaccggtgc 178  Q
    ||||||| |||||||||||| |||||||||||||| | ||||  |||| || |||||||| ||||||    
T  41945512 ccagtgcgcatgcctctacgcacgagccggattagtcgtccacctttggtgagtcggaaatcggtgc 41945578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 108 - 178
Target Start/End: Complemental strand, 44961712 - 44961642
Alignment:
Q  108 ttgaccagtgcacatgcctctacgtacgagccggattagacatccatatttgatgggtcggaaaccggtgc 178  Q
    ||||||||| | |||| ||||||||||||| | ||||||  ||||   |||||||||||||||||||||||    
T  44961712 ttgaccagtacgcatgtctctacgtacgagtcagattagttatccgcctttgatgggtcggaaaccggtgc 44961642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 112 - 146
Target Start/End: Complemental strand, 49142739 - 49142705
Alignment:
Q  112 ccagtgcacatgcctctacgtacgagccggattag 146  Q
    |||||||||||||||||||| ||||||||||||||    
T  49142739 ccagtgcacatgcctctacgcacgagccggattag 49142705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 20 - 89
Target Start/End: Complemental strand, 19914865 - 19914796
Alignment:
Q  20 aaccaagttgtttgggctccactagcaaggagctcctaacaaggatgtatccaagaaataccgggttcga 89  Q
    |||||||||| |||||||||| | |||||||||||||  |||||| ||| | ||| ||||| ||||||||    
T  19914865 aaccaagttgcttgggctccagtggcaaggagctccttccaaggacgtacctaaggaatactgggttcga 19914796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 20 - 144
Target Start/End: Original strand, 47341822 - 47341947
Alignment:
Q  20 aaccaagttgtttgggctccactagcaaggagctcctaacaaggatgtatccaagaaataccgggttcgacttcca-gggaaaaaatatttgaccagtgc 118  Q
    |||||||||| |||||||||| | ||||||||||| |  |||||| ||| ||  | ||||||| |||||| | ||| ||| || || | ||| |||||||    
T  47341822 aaccaagttgcttgggctccagtggcaaggagctcattccaaggacgtacccggggaataccgagttcgattcccagggggaacaacacttggccagtgc 47341921  T
Q  119 acatgcctctacgtacgagccggatt 144  Q
     |||||||||||| |||||| |||||    
T  47341922 gcatgcctctacgcacgagcaggatt 47341947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 20 - 56
Target Start/End: Complemental strand, 5039581 - 5039545
Alignment:
Q  20 aaccaagttgtttgggctccactagcaaggagctcct 56  Q
    ||||||||||||||||||||| | |||||||||||||    
T  5039581 aaccaagttgtttgggctccagtggcaaggagctcct 5039545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 53; Significance: 3e-21; HSPs: 28)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 23 - 182
Target Start/End: Original strand, 21286390 - 21286550
Alignment:
Q  23 caagttgtttgggctccactagcaaggagctcctaacaaggatgtatccaagaaataccgggttcgacttccagg-gaaaaaatatttgaccagtgcaca 121  Q
    ||||||||||| |||||| | |||||||||||||  |||||| ||||||  | |||||||||||||| | ||||| |||| ||   ||||||||||| ||    
T  21286390 caagttgtttgagctccagtggcaaggagctccttccaaggacgtatccggggaataccgggttcgattcccaggcgaaacaacgcttgaccagtgcgca 21286489  T
Q  122 tgcctctacgtacgagccggattagacatccatatttgatgggtcggaaaccggtgcaaaa 182  Q
    |||||||||| |||||| ||||||| ||  |||  ||| ||||| ||||||||||||||||    
T  21286490 tgcctctacgcacgagctggattagtcactcatcattggtgggttggaaaccggtgcaaaa 21286550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 20 - 146
Target Start/End: Complemental strand, 21180477 - 21180350
Alignment:
Q  20 aaccaagttgtttgggctccactagcaaggagctcctaacaaggatgtatccaagaaataccgggttcgacttccagggaaaa-aatatttgaccagtgc 118  Q
    ||||||||||||||||||||| | |||||||||||||  |||||| ||| || |  |||||||| ||||| | ||| ||| || || | ||| |||||||    
T  21180477 aaccaagttgtttgggctccagtggcaaggagctccttccaaggacgtacccgaagaataccggattcgattcccatggagaacaacacttggccagtgc 21180378  T
Q  119 acatgcctctacgtacgagccggattag 146  Q
    ||||||||||||| ||||||||||||||    
T  21180377 acatgcctctacgcacgagccggattag 21180350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 24 - 182
Target Start/End: Original strand, 7787003 - 7787162
Alignment:
Q  24 aagttgtttgggctccactagcaaggagctcctaacaaggatgtatccaagaaataccgggttcgacttccagggaaaa-aatatttgaccagtgcacat 122  Q
    |||||| |||||||||| | ||||||| |||||  | |||| ||| ||  | |||||||||||||| ||||||||  || |||| ||| ||||| | |||    
T  7787003 aagttggttgggctccagtggcaaggaactcctttctaggacgtacccggggaataccgggttcgatttccagggggaacaatacttggccagtacgcat 7787102  T
Q  123 gcctctacgtacgagccggattagacatccatatttgatgggtcggaaaccggtgcaaaa 182  Q
    ||||||||| |||||||||||||| |  |||| |||| ||| ||| ||||||||||||||    
T  7787103 gcctctacgcacgagccggattagtcgcccatctttggtggatcgaaaaccggtgcaaaa 7787162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 20 - 178
Target Start/End: Original strand, 29422158 - 29422317
Alignment:
Q  20 aaccaagttgtttgggctccactagcaaggagctcctaacaaggatgtatccaagaaataccgggttcgacttccag-ggaaaaaatatttgaccagtgc 118  Q
    ||||||||||||||||||||| |||||||||||||||  |||||| ||| ||  | ||||| |||||||| |||||| || || || | ||| ||| ||     
T  29422158 aaccaagttgtttgggctccagtagcaaggagctcctttcaaggacgtacccggggaatactgggttcgatttccagagggaacaacacttggccaatga 29422257  T
Q  119 acatgcctctacgtacgagccggattagacatccatatttgatgggtcggaaaccggtgc 178  Q
     ||| ||| |||| |||||||||||||| | ||||  |||||||| ||||||| ||||||    
T  29422258 gcatacctttacgcacgagccggattagtcgtccacctttgatggatcggaaatcggtgc 29422317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 44 - 178
Target Start/End: Original strand, 2784900 - 2785034
Alignment:
Q  44 gcaaggagctcctaacaaggatgtatccaagaaataccgggttcgacttccagggaaaaaatatttgaccagtgcacatgcctctacgtacgagccggat 143  Q
    |||| ||||||||  |||||| |||||| || ||||||| |||||| || |||||||| || |||||  |||||| |||||||||||| | ||| | |||    
T  2784900 gcaatgagctcctttcaaggacgtatccgaggaataccgagttcgattttcagggaaacaagatttggtcagtgcgcatgcctctacgcatgagtcagat 2784999  T
Q  144 tagacatccatatttgatgggtcggaaaccggtgc 178  Q
    ||| | |||||  |||||| |||||||||||||||    
T  2785000 tagtcgtccatcattgatgagtcggaaaccggtgc 2785034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 30 - 182
Target Start/End: Original strand, 25549681 - 25549834
Alignment:
Q  30 tttgggctccactagcaaggagctcctaacaaggatgtatccaagaaataccgggttcgacttccagggaaaa-aatatttgaccagtgcacatgcctct 128  Q
    ||||||||||| | |||||||||||||  |||| | ||||    | ||||| |||||||| |   |||||||| || ||||| | |||||||||||||||    
T  25549681 tttgggctccagtggcaaggagctccttccaagtacgtatttggggaatactgggttcgattcttagggaaaacaacatttggctagtgcacatgcctct 25549780  T
Q  129 acgtacgagccggattagacatccatatttgatgggtcggaaaccggtgcaaaa 182  Q
    ||| |||||||||||||| | ||||| |||||||| ||| ||| ||||||||||    
T  25549781 acgcacgagccggattagtcgtccatctttgatggatcgtaaatcggtgcaaaa 25549834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 19 - 178
Target Start/End: Complemental strand, 41032069 - 41031910
Alignment:
Q  19 caaccaagttgtttgggctccactagcaaggagctcctaacaaggatgtatccaagaaataccgggttcgacttccagggaaaa-aatatttgaccagtg 117  Q
    ||||||| ||| |||||||||| | |||||||||||||  |||||| ||| ||| | || ||||||||||| | ||||||  || || | ||| ||||||    
T  41032069 caaccaaattgcttgggctccagtggcaaggagctccttccaaggacgta-ccagggaacaccgggttcgattcccagggggaacaacacttggccagtg 41031971  T
Q  118 cacatgcctctacgtacgagccggattagacatccatatttgatgggtcggaaaccggtgc 178  Q
      |||||||||||| |||||||||||||| || |||  |||| ||||||||||||| ||||    
T  41031970 tgcatgcctctacgcacgagccggattagtcacccacctttggtgggtcggaaaccagtgc 41031910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 20 - 178
Target Start/End: Original strand, 7747217 - 7747376
Alignment:
Q  20 aaccaagttgtttgggctccactagcaaggagctcctaacaaggatgtatccaagaaataccgggttcgacttccagg-gaaaaaatatttgaccagtgc 118  Q
    |||||||||| |||||||||| | |||||||||||||  |||||| ||||||  | |||||||||||||| | | ||| | || ||  |||| ||||||     
T  7747217 aaccaagttgcttgggctccagtggcaaggagctccttccaaggacgtatccggggaataccgggttcgattcctaggaggaacaacgtttggccagtgt 7747316  T
Q  119 acatgcctctacgtacgagccggattagacatccatatttgatgggtcggaaaccggtgc 178  Q
     |||||||||||| | |||||||||||| | | ||  |||  ||||||||||||||||||    
T  7747317 gcatgcctctacgcatgagccggattagtcgttcacctttagtgggtcggaaaccggtgc 7747376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 20 - 178
Target Start/End: Original strand, 8410074 - 8410233
Alignment:
Q  20 aaccaagttgtttgggctccactagcaaggagctcctaacaaggatgtatccaagaaataccgggttcgacttccagggaaaa-aatatttgaccagtgc 118  Q
    |||||||||| |||||||||| | |||||||||||||  |||||| ||| ||    |||| ||||||||| | ||||||  || || | ||| |||||||    
T  8410074 aaccaagttgcttgggctccagtggcaaggagctccttccaaggacgtacccggagaatatcgggttcgattcccagggggaacaacacttggccagtgc 8410173  T
Q  119 acatgcctctacgtacgagccggattagacatccatatttgatgggtcggaaaccggtgc 178  Q
     |||||||||||| |||||||||||||| |  |||  ||||  |||||||||||||||||    
T  8410174 gcatgcctctacgcacgagccggattagtcgcccacttttggggggtcggaaaccggtgc 8410233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 23 - 177
Target Start/End: Original strand, 37560119 - 37560274
Alignment:
Q  23 caagttgtttgggctccactagcaaggagctcctaacaaggatgtatccaagaaataccgggttcgact-tccagggaaaaaatatttgaccagtgcaca 121  Q
    |||||||||||||||||| | | ||| |||||||  |||||| ||| || || |||||| ||||||| | || |||| || ||  ||||  |||||| ||    
T  37560119 caagttgtttgggctccagtggtaagaagctccttccaaggacgtacccgaggaataccaggttcgattctcaaggggaacaacgtttggtcagtgcgca 37560218  T
Q  122 tgcctctacgtacgagccggattagacatccatatttgatgggtcggaaaccggtg 177  Q
    |||||||||| |||||||||||||  | ||||  |||||||||||| |||||||||    
T  37560219 tgcctctacgcacgagccggattaatcgtccacctttgatgggtcgaaaaccggtg 37560274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 20 - 182
Target Start/End: Complemental strand, 42770814 - 42770651
Alignment:
Q  20 aaccaagttgtttgggctccactagcaaggagctcctaacaaggatgtatccaagaaataccgggttcgact-tccagggaaaaaatatttgaccagtgc 118  Q
    |||||||||| |||||||||| | |||| ||||||||  |||||| |||||| ||||||||||||||| | | ||  ||| || ||   ||| |||||||    
T  42770814 aaccaagttgcttgggctccagtggcaaagagctccttccaaggacgtatccgagaaataccgggttcaattctcagggggaacaacgcttggccagtgc 42770715  T
Q  119 acatgcctctacgtacgagccggattagacatccatatttgatgggtcggaaaccggtgcaaaa 182  Q
     ||||||||| || |||||||||||||  | ||||  |||| ||||||| |||||| |||||||    
T  42770714 gcatgcctcttcgcacgagccggattaatcgtccacctttggtgggtcgaaaaccgatgcaaaa 42770651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 24 - 182
Target Start/End: Original strand, 24179518 - 24179674
Alignment:
Q  24 aagttgtttgggctccactagcaaggagctcctaacaaggatgtatccaagaaataccgggttcgacttccagggaaaaaatatttgaccagtgcacatg 123  Q
    ||||||||||||||| | | |||| ||||||||  |||||| ||| ||| ||| |||||| ||||| |  ||||| || ||  |||| ||||||||||||    
T  24179518 aagttgtttgggctctagtggcaaagagctccttccaaggacgtacccatgaa-taccgg-ttcgattctcaggggaacaacgtttggccagtgcacatg 24179615  T
Q  124 cctctacgtacgagccggattagacatccatatttgatgggtcggaaaccggtgcaaaa 182  Q
    |||||||| | |||||||||||| | ||||| |||| |||||   ||||||||||||||    
T  24179616 cctctacgcatgagccggattagtcgtccatctttggtgggttaaaaaccggtgcaaaa 24179674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 112 - 178
Target Start/End: Complemental strand, 25540474 - 25540408
Alignment:
Q  112 ccagtgcacatgcctctacgtacgagccggattagacatccatatttgatgggtcggaaaccggtgc 178  Q
    ||||||| |||||||||||| |||||||||||||| | ||||  |||| ||||||||||||||||||    
T  25540474 ccagtgcgcatgcctctacgcacgagccggattagtcgtccacctttggtgggtcggaaaccggtgc 25540408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 20 - 172
Target Start/End: Complemental strand, 10046639 - 10046487
Alignment:
Q  20 aaccaagttgtttgggctccactagcaaggagctcctaacaaggatgtatccaagaaataccgggttcgact-tccagggaaaaaatatttgaccagtgc 118  Q
    |||||||||| |||||||||| | |||||||||||||  |||| | ||||||    |||||||||||||| | || ||||||| ||  ||||| ||||||    
T  10046639 aaccaagttgcttgggctccaatggcaaggagctccttccaagaacgtatccggagaataccgggttcgattctcaagggaaacaacgtttga-cagtgc 10046541  T
Q  119 acatgcctctacgtacgagccggattagacatccatatttgatgggtcggaaac 172  Q
     |||||||||||| | |||||||||||| |  |||  |||| ||||||||||||    
T  10046540 gcatgcctctacgcatgagccggattagtcgaccacctttggtgggtcggaaac 10046487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 112 - 177
Target Start/End: Complemental strand, 28525525 - 28525460
Alignment:
Q  112 ccagtgcacatgcctctacgtacgagccggattagacatccatatttgatgggtcggaaaccggtg 177  Q
    ||||||| |||||||||||| |||||||||||||| ||||||  ||| ||||||||||||| ||||    
T  28525525 ccagtgcgcatgcctctacgcacgagccggattagtcatccacctttaatgggtcggaaactggtg 28525460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 20 - 146
Target Start/End: Original strand, 2550811 - 2550938
Alignment:
Q  20 aaccaagttgtttgggctccactagcaaggagctcctaacaaggatgtatccaagaaataccgggttcgacttccagg-gaaaaaatatttgaccagtgc 118  Q
    |||||||||| |||||||||| | ||||||||||||| ||||||| ||||||  | |||| ||||||||| | ||||| | || || | ||  |||||||    
T  2550811 aaccaagttgcttgggctccagtggcaaggagctccttacaaggacgtatccggggaatatcgggttcgattcccaggaggaacaacacttagccagtgc 2550910  T
Q  119 acatgcctctacgtacgagccggattag 146  Q
     |||| ||||||| | ||||||||||||    
T  2550911 gcatgtctctacgcatgagccggattag 2550938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 120 - 178
Target Start/End: Complemental strand, 20116674 - 20116616
Alignment:
Q  120 catgcctctacgtacgagccggattagacatccatatttgatgggtcggaaaccggtgc 178  Q
    |||||||||||| | |||||||||||| | ||||  |||||||||||||||||||||||    
T  20116674 catgcctctacgcatgagccggattagccgtccacctttgatgggtcggaaaccggtgc 20116616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 19 - 178
Target Start/End: Original strand, 12864166 - 12864326
Alignment:
Q  19 caaccaagttgtttgggctccactagcaaggagctcctaacaaggatgtatccaagaaataccgggttcgacttccagggaaaa-aatatttgaccagtg 117  Q
    |||||||||||||||||||||| |  ||||||||||||  ||| || |||| |  | |||||||| ||||| ||||||||  || || | |||  |||||    
T  12864166 caaccaagttgtttgggctccagtgacaaggagctccttccaatgacgtattcggggaataccggattcgatttccagggggaacaacacttggtcagtg 12864265  T
Q  118 cacatgcctctacgtacgagccggattagacatccatatttgatgggtcggaaaccggtgc 178  Q
    | ||||||||| || | ||||| |||||| | ||||   ||| ||||||||||||||||||    
T  12864266 cgcatgcctctgcgcatgagccagattagtcgtccaccattggtgggtcggaaaccggtgc 12864326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 27 - 178
Target Start/End: Complemental strand, 39807041 - 39806889
Alignment:
Q  27 ttgtttgggctccactagcaaggagctcctaacaaggatgtatccaagaaataccgggttcgacttccagg-gaaaaaatatttgaccagtgcacatgcc 125  Q
    |||||||||||||| | |||||  |||||| ||||||| ||| ||  | |||||||||||||| | ||| | |||| ||  |||| ||||||| ||||||    
T  39807041 ttgtttgggctccagtggcaagatgctccttacaaggacgtacccggggaataccgggttcgattcccaagagaaacaacgtttggccagtgcgcatgcc 39806942  T
Q  126 tctacgtacgagccggattagacatccatatttgatgggtcggaaaccggtgc 178  Q
    |||||  ||||| |||||||| ||||||  |||| ||| ||  ||||||||||    
T  39806941 tctacacacgagtcggattagtcatccacctttggtggttcataaaccggtgc 39806889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 20 - 71
Target Start/End: Complemental strand, 14853530 - 14853479
Alignment:
Q  20 aaccaagttgtttgggctccactagcaaggagctcctaacaaggatgtatcc 71  Q
    ||||||||||||||||||||| | ||||||| |||||  |||||||||||||    
T  14853530 aaccaagttgtttgggctccagtggcaaggaactcctttcaaggatgtatcc 14853479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 20 - 146
Target Start/End: Complemental strand, 18649189 - 18649062
Alignment:
Q  20 aaccaagttgtttgggctccactagcaaggagctcctaacaaggatgtatccaagaaataccgggttcgacttccagg-gaaaaaatatttgaccagtgc 118  Q
    ||||||||||||||||||||| | ||||| |||| ||  |||||||| || || | |||||||| ||||| |  |||| | || ||||||||  ||||||    
T  18649189 aaccaagttgtttgggctccagtggcaagaagctgcttccaaggatgcattcagggaataccggattcgattctcaggaggaacaatatttgggcagtgc 18649090  T
Q  119 acatgcctctacgtacgagccggattag 146  Q
     |||||||||||| | ||| ||||||||    
T  18649089 gcatgcctctacgcatgagtcggattag 18649062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 20 - 146
Target Start/End: Original strand, 38005345 - 38005472
Alignment:
Q  20 aaccaagttgtttgggctccactagcaaggagctcctaacaaggatgtatccaagaaataccgggttcgacttcc-agggaaaaaatatttgaccagtgc 118  Q
    ||||||||||||||||||||| | |||||||||||||  |||||| ||| ||  | ||||| |||||||| | || |||| || ||   ||| |||||||    
T  38005345 aaccaagttgtttgggctccagtggcaaggagctccttccaaggacgtacccggggaatactgggttcgattcccaaggggaacaacgcttggccagtgc 38005444  T
Q  119 acatgcctctacgtacgagccggattag 146  Q
     |||||||||||  | ||||||||||||    
T  38005445 gcatgcctctacacatgagccggattag 38005472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 20 - 173
Target Start/End: Original strand, 5035231 - 5035385
Alignment:
Q  20 aaccaagttgtttgggctccactagcaaggagctcctaacaaggatgtatccaagaaataccgggttcgacttccagggaaaa-aatatttgaccagtgc 118  Q
    ||||||||||||||||||||| | ||| |||||| ||   ||| | ||||||   |||||  |||||||| | ||||  |||| |||  |||||||||||    
T  5035231 aaccaagttgtttgggctccagtggcacggagctgcttctaagaacgtatccggaaaatattgggttcgattcccagaaaaaacaatgcttgaccagtgc 5035330  T
Q  119 acatgcctctacgtacgagccggattagacatccatatttgatgggtcggaaacc 173  Q
     |||| ||||||| |||| ||||||||  ||||||  ||| ||||||||||||||    
T  5035331 gcatgtctctacgcacgaaccggattaatcatccacctttaatgggtcggaaacc 5035385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 20 - 177
Target Start/End: Complemental strand, 6358314 - 6358156
Alignment:
Q  20 aaccaagttgtttgggctccactagcaaggagctcctaacaaggatgtatccaagaaataccgggttcgacttccagggaaaa-aatatttgaccagtgc 118  Q
    |||| |||||||||||||||| | ||||| ||||| |   ||||| ||||||  | |||||| | ||||| ||||||||  || || | ||| |||||||    
T  6358314 aaccgagttgtttgggctccagtggcaagaagctcattcaaaggacgtatccggggaataccagattcgatttccagggggaacaacacttggccagtgc 6358215  T
Q  119 acatgcctctacgtacgagccggattagacatccatatttgatgggtcggaaaccggtg 177  Q
     |||||||||||| | |||||||||||| | ||||   ||| ||||||| |||||||||    
T  6358214 gcatgcctctacgcatgagccggattagtcgtccaccattggtgggtcgaaaaccggtg 6358156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 112 - 178
Target Start/End: Original strand, 10823096 - 10823162
Alignment:
Q  112 ccagtgcacatgcctctacgtacgagccggattagacatccatatttgatgggtcggaaaccggtgc 178  Q
    ||||||| |||||||||||| |||||||||||||| |  |||  |||  ||||||||||||||||||    
T  10823096 ccagtgcgcatgcctctacgcacgagccggattagtcgcccaccttttgtgggtcggaaaccggtgc 10823162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 20 - 178
Target Start/End: Complemental strand, 20612699 - 20612538
Alignment:
Q  20 aaccaagttgtttgggctccactagcaaggagctcctaacaaggatgtatccaagaaataccgggttcgacttccag--ggaaaaaatatttgaccagtg 117  Q
    |||||||||| |||||||||| | |||||||||||||  ||||| ||||| |  | |||||||||||||| |  |||  || || || | ||| ||||||    
T  20612699 aaccaagttgcttgggctccagtggcaaggagctccttccaaggttgtattcggggaataccgggttcgattctcaggagggaacaacacttggccagtg 20612600  T
Q  118 cacatgcctctacgtacgagcc-ggattagacatccatatttgatgggtcggaaaccggtgc 178  Q
    | |||||||||| | | ||||| ||||||| | ||||   ||| ||||||||||||||||||    
T  20612599 cgcatgcctctatgcatgagccgggattagtcgtccaccattggtgggtcggaaaccggtgc 20612538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 20 - 145
Target Start/End: Original strand, 34356149 - 34356275
Alignment:
Q  20 aaccaagttgtttgggctccactagcaaggagctcctaacaaggatgtatccaagaaataccgggttcgacttccagggaaaa-aatatttgaccagtgc 118  Q
    ||||||||||||||||||||| | ||||||||||  |  |||||| |||||   | |||||||||||||| ||||||||  || || | |||  ||||||    
T  34356149 aaccaagttgtttgggctccagtggcaaggagctatttccaaggacgtatctggggaataccgggttcgatttccagggggaacaacacttggtcagtgc 34356248  T
Q  119 acatgcctctacgtacgagccggatta 145  Q
     |||||||||| | | |||||||||||    
T  34356249 gcatgcctctatgcatgagccggatta 34356275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 113 - 178
Target Start/End: Original strand, 34722717 - 34722782
Alignment:
Q  113 cagtgcacatgcctctacgtacgagccggattagacatccatatttgatgggtcggaaaccggtgc 178  Q
    ||||||||||| ||||||| |||||||||||||| |  |||  |||||||| || |||||||||||    
T  34722717 cagtgcacatgtctctacgcacgagccggattagtcgcccacctttgatggatcagaaaccggtgc 34722782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 52; Significance: 1e-20; HSPs: 25)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 19 - 178
Target Start/End: Original strand, 45521115 - 45521274
Alignment:
Q  19 caaccaagttgtttgggctccactagcaaggagctcctaacaaggatgtatccaagaaataccgggttcgacttccagggaaaaaatatttgaccagtgc 118  Q
    ||||||||||| |||||||||| | |||||||| || |  |||||||||| ||  | |||||||||||||| | |||||| || || | |||| ||||||    
T  45521115 caaccaagttgcttgggctccagtggcaaggagttcattccaaggatgtacccggggaataccgggttcgattcccaggggaacaacacttgatcagtgc 45521214  T
Q  119 acatgcctctacgtacgagccggattagacatccatatttgatgggtcggaaaccggtgc 178  Q
     |||||||||||| | |||||||||||| |   ||  |||||||||||||||||||||||    
T  45521215 gcatgcctctacgcatgagccggattagtcgctcacctttgatgggtcggaaaccggtgc 45521274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 24 - 182
Target Start/End: Original strand, 18373961 - 18374120
Alignment:
Q  24 aagttgtttgggctccactagcaaggagctcctaacaaggatgtatccaagaaataccgggttcgacttccagggaaaa-aatatttgaccagtgcacat 122  Q
    ||||||||||||||||| | ||||||||||| |  ||| ||| |||||  |||||||| ||||||| |  |||||| || ||   ||||||||||| |||    
T  18373961 aagttgtttgggctccaatggcaaggagctcattccaaagatatatccgggaaataccaggttcgattctcagggagaacaacgcttgaccagtgcgcat 18374060  T
Q  123 gcctctacgtacgagccggattagacatccatatttgatgggtcggaaaccggtgcaaaa 182  Q
    ||||||||| | |||||||||||| | ||||  |||| ||||||| ||||||||||||||    
T  18374061 gcctctacgcatgagccggattagtcgtccaactttggtgggtcgaaaaccggtgcaaaa 18374120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 20 - 178
Target Start/End: Complemental strand, 15884718 - 15884560
Alignment:
Q  20 aaccaagttgtttgggctccactagcaaggagctcctaacaaggatgtatccaagaaataccgggttcgacttccagggaaaaaatatttgaccagtgca 119  Q
    |||||||||| |||||||||| | | |||||||||||  |||||| ||| |   | |||||||||||||| | |||||| || || | ||| | |||||     
T  15884718 aaccaagttgattgggctccagtggtaaggagctccttccaaggacgtacctggggaataccgggttcgattcccaggggaacaacacttggcaagtgcg 15884619  T
Q  120 catgcctctacgtacgagccggattagacatccatatttgatgggtcggaaaccggtgc 178  Q
    |||||||||||| |||||||||||||| |  |||  |||| ||||||||||||||||||    
T  15884618 catgcctctacgcacgagccggattagtcgcccacctttggtgggtcggaaaccggtgc 15884560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 20 - 178
Target Start/End: Complemental strand, 2467281 - 2467122
Alignment:
Q  20 aaccaagttgtttgggctccactagcaaggagctcctaacaaggatgtatccaagaaataccgggttcgacttccagggaaaaaatat-ttgaccagtgc 118  Q
    |||||||||| |||||||||| | |||||||||||||  |||||| ||||||  | |||||||||||||| ||||||||  || |  | ||| |||||||    
T  2467281 aaccaagttgcttgggctccagtggcaaggagctccttccaaggacgtatccggggaataccgggttcgatttccagggggaacaactcttggccagtgc 2467182  T
Q  119 acatgcctctacgtacgagccggattagacatccatatttgatgggtcggaaaccggtgc 178  Q
     |||| ||||| | | |||||||||||| | |||| | ||| || |||||||||||||||    
T  2467181 gcatgtctctatgcatgagccggattagtcgtccacaattggtgtgtcggaaaccggtgc 2467122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 20 - 174
Target Start/End: Original strand, 8141049 - 8141204
Alignment:
Q  20 aaccaagttgtttgggctccactagcaaggagctcctaacaaggatgtatccaagaaataccgggttcgacttcca-gggaaaaaatatttgaccagtgc 118  Q
    ||||||||||||||||||||| | |||||||||| ||  |||||| |||| |  | |||||||||||||| ||||| |||||| ||   ||| |||||||    
T  8141049 aaccaagttgtttgggctccagtggcaaggagctgcttccaaggacgtattcggggaataccgggttcgatttccaggggaaacaacgcttggccagtgc 8141148  T
Q  119 acatgcctctacgtacgagccggattagacatccatatttgatgggtcggaaaccg 174  Q
     |||||||||||| | |||| | ||||| | |||| ||||| |||||| |||||||    
T  8141149 gcatgcctctacgcatgagctgaattagtcgtccacatttggtgggtcagaaaccg 8141204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 20 - 178
Target Start/End: Complemental strand, 14666234 - 14666075
Alignment:
Q  20 aaccaagttgtttgggctccactagcaaggagctcctaacaaggatgtatccaagaaataccgggttcgacttcca-gggaaaaaatatttgaccagtgc 118  Q
    |||||||||| |||||||||| | ||||||||||| |  |||||| ||||||  | |||||||||||||| | ||| |||||| || | ||| |||||||    
T  14666234 aaccaagttgcttgggctccagtggcaaggagctcattccaaggacgtatccggggaataccgggttcgattcccaggggaaacaacacttggccagtgc 14666135  T
Q  119 acatgcctctacgtacgagccggattagacatccatatttgatgggtcggaaaccggtgc 178  Q
     |||||||||||| || |||| |||||| |  ||| | ||| ||||||| ||||||||||    
T  14666134 gcatgcctctacgcacaagccagattagtcgcccacagttggtgggtcgaaaaccggtgc 14666075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 20 - 182
Target Start/End: Complemental strand, 44893441 - 44893278
Alignment:
Q  20 aaccaagttgtttgggctccactagcaaggagctcctaacaaggatgtatccaagaaataccgggttcgacttcca-gggaaaaaatatttgaccagtgc 118  Q
    ||||||||||||||||||||| | |||||||||||||  |||||| ||| ||  | |||||||||||| | ||| | ||| || |||  ||| ||||||     
T  44893441 aaccaagttgtttgggctccagtggcaaggagctccttccaaggacgtacccggggaataccgggttcaatttctagggggaacaatgcttggccagtgt 44893342  T
Q  119 acatgcctctacgtacgagccggattagacatccatatttgatgggtcggaaaccggtgcaaaa 182  Q
     |||||||||||| |||||||||||||  |   ||   ||||||||||||||||||||||||||    
T  44893341 gcatgcctctacgcacgagccggattaatcgctcacccttgatgggtcggaaaccggtgcaaaa 44893278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 20 - 146
Target Start/End: Original strand, 29933720 - 29933846
Alignment:
Q  20 aaccaagttgtttgggctccactagcaaggagctcctaacaaggatgtatccaagaaataccgggttcgacttccagggaaaa-aatatttgaccagtgc 118  Q
    ||||||||||||||| ||||| | |||||||||||||   ||| ||||||||    ||||| |||||||| | ||||||| || || | ||||||||||     
T  29933720 aaccaagttgtttggactccagtggcaaggagctccttctaagaatgtatccggagaatac-gggttcgattcccagggagaacaacacttgaccagtgt 29933818  T
Q  119 acatgcctctacgtacgagccggattag 146  Q
    ||||||||||||||| ||||||||||||    
T  29933819 acatgcctctacgtatgagccggattag 29933846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 20 - 146
Target Start/End: Complemental strand, 33935898 - 33935771
Alignment:
Q  20 aaccaagttgtttgggctccactagcaaggagctcctaacaaggatgtatccaagaaataccgggttcgacttccaggga-aaaaatatttgaccagtgc 118  Q
    ||||||||||||||||||||| | |||||||||||||   ||||||||| ||||| |||||||| ||||| | | ||||| || || | ||| |||||||    
T  33935898 aaccaagttgtttgggctccagttgcaaggagctccttttaaggatgtacccaaggaataccggattcgattcctagggagaacaacacttggccagtgc 33935799  T
Q  119 acatgcctctacgtacgagccggattag 146  Q
     ||||||| |||| | ||| ||||||||    
T  33935798 gcatgcctatacgcatgagtcggattag 33935771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 20 - 146
Target Start/End: Original strand, 6100419 - 6100546
Alignment:
Q  20 aaccaagttgtttgggctccactagcaaggagctcctaacaaggatgtatccaagaaataccgggttcgacttccagg-gaaaaaatatttgaccagtgc 118  Q
    |||||||||||||||||| || | |||||||||||||  |||||| ||||||  | |||||||||||||| | ||||| | || ||   ||| |||||||    
T  6100419 aaccaagttgtttgggcttcagtggcaaggagctcctttcaaggacgtatccggggaataccgggttcgattcccaggaggaacaacgcttggccagtgc 6100518  T
Q  119 acatgcctctacgtacgagccggattag 146  Q
     |||||| ||||| | ||||||||||||    
T  6100519 gcatgccactacgcatgagccggattag 6100546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 24 - 146
Target Start/End: Original strand, 17981392 - 17981515
Alignment:
Q  24 aagttgtttgggctccactagcaaggagctcctaacaaggatgtatccaagaaataccgggttcgacttcca-gggaaaaaatatttgaccagtgcacat 122  Q
    |||||| |||||||||| | |||||||||||||  |||||||||| ||  |||||||||||||||| | ||| ||| || ||   ||||||||||  |||    
T  17981392 aagttgcttgggctccagtggcaaggagctccttccaaggatgtacccgggaaataccgggttcgattcccagggggaacaactcttgaccagtgtgcat 17981491  T
Q  123 gcctctacgtacgagccggattag 146  Q
    ||||||||| ||||| || |||||    
T  17981492 gcctctacgcacgagtcgaattag 17981515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 20 - 146
Target Start/End: Original strand, 583761 - 583886
Alignment:
Q  20 aaccaagttgtttgggctccactagcaaggagctcctaacaaggatgtatccaagaaataccgggttcgacttccagggaaaaaatatttgaccagtgca 119  Q
    ||||||||||||||||||| | | |||||||||| ||  |||||| |||  | ||||||||||||||||| ||||  || || ||   |||||||||||     
T  583761 aaccaagttgtttgggctctagtggcaaggagctacttccaaggacgtactcgagaaataccgggttcga-ttcctagggaacaacgcttgaccagtgcg 583859  T
Q  120 catgcctctacgtacgagccggattag 146  Q
    |||||||||||| | ||| ||||||||    
T  583860 catgcctctacgcatgagtcggattag 583886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 20 - 178
Target Start/End: Original strand, 14846523 - 14846681
Alignment:
Q  20 aaccaagttgtttgggctccactagcaaggagctcctaacaaggatgtatccaagaaataccgggttcgacttccagggaaaaaatatttgaccagtgca 119  Q
    ||||||||||||||||||||||| ||||| |||||||   ||||| ||| ||  | |||||||||||||| |  ||||| || |||  |||  ||||||     
T  14846523 aaccaagttgtttgggctccactggcaagaagctccttctaaggacgtacccggggaataccgggttcgattctcaggggaacaatgattggtcagtgcg 14846622  T
Q  120 catgcctctacgtacgagccggattagacatccatatttgatgggtcggaaaccggtgc 178  Q
    |||||||||||| | ||| | ||| || | ||||  |||| ||||||||||| ||||||    
T  14846623 catgcctctacgcatgagtcagataagtcgtccacctttggtgggtcggaaatcggtgc 14846681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 120 - 174
Target Start/End: Original strand, 43027353 - 43027407
Alignment:
Q  120 catgcctctacgtacgagccggattagacatccatatttgatgggtcggaaaccg 174  Q
    |||||||||||| | |||||||||||| | ||||| |||||||||||||||||||    
T  43027353 catgcctctacgcatgagccggattagtcgtccatctttgatgggtcggaaaccg 43027407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 24 - 146
Target Start/End: Complemental strand, 33401958 - 33401835
Alignment:
Q  24 aagttgtttgggctccactagcaaggagctcctaacaaggatgtatccaagaaataccgggttcgacttcca-gggaaaaaatatttgaccagtgcacat 122  Q
    ||||||||||||||||| | |||||||||||||  |||||| |||  |  | |||||||||||||| || || ||| || || | ||||||||||  |||    
T  33401958 aagttgtttgggctccagtggcaaggagctcctttcaaggacgtactcggggaataccgggttcgattttcagggggaacaacacttgaccagtgtgcat 33401859  T
Q  123 gcctctacgtacgagccggattag 146  Q
    ||||||||| | ||| ||||||||    
T  33401858 gcctctacgcatgagtcggattag 33401835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 59 - 174
Target Start/End: Original strand, 36662391 - 36662506
Alignment:
Q  59 caaggatgtatccaagaaataccgggttcgacttccagggaaaaaatatttgaccagtgcacatgcctctacgtacgagccggattagacatccatattt 158  Q
    |||||| |||| | || |||| ||||||||| || ||||| || |||| ||  ||||||| |||||||||||||| || ||||||||| | ||||  |||    
T  36662391 caaggacgtatacgaggaatatcgggttcgattttcaggggaacaatacttagccagtgcgcatgcctctacgtatgaaccggattagtcgtccactttt 36662490  T
Q  159 gatgggtcggaaaccg 174  Q
     |||| ||||||||||    
T  36662491 aatggatcggaaaccg 36662506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 18 - 89
Target Start/End: Complemental strand, 38922579 - 38922508
Alignment:
Q  18 acaaccaagttgtttgggctccactagcaaggagctcctaacaaggatgtatccaagaaataccgggttcga 89  Q
    |||||||||||| |||||||||| | |||||||||||||  |||||| ||| ||  | ||||||||||||||    
T  38922579 acaaccaagttgcttgggctccagtggcaaggagctccttccaaggacgtacccggggaataccgggttcga 38922508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 112 - 178
Target Start/End: Complemental strand, 4479366 - 4479300
Alignment:
Q  112 ccagtgcacatgcctctacgtacgagccggattagacatccatatttgatgggtcggaaaccggtgc 178  Q
    ||||||| |||||||||||| | |||| ||||||| | ||||  |||| ||||||||||||||||||    
T  4479366 ccagtgcgcatgcctctacgcatgagctggattagtcgtccacctttggtgggtcggaaaccggtgc 4479300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 20 - 130
Target Start/End: Original strand, 30903283 - 30903393
Alignment:
Q  20 aaccaagttgtttgggctccactagcaaggagctcctaacaaggatgtatccaagaaataccgggttcgacttccagggaaaaaatatttgaccagtgca 119  Q
    |||||||||||||| |||||| ||| |||||||| ||  ||| || |||| |  | |||||||| ||||| || |||||||| |||  |||||||||||     
T  30903283 aaccaagttgtttgcgctccagtagtaaggagcttcttccaatgacgtattcggggaataccggattcgattttcagggaaacaatgcttgaccagtgcg 30903382  T
Q  120 catgcctctac 130  Q
    |||||| ||||    
T  30903383 catgccgctac 30903393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 108 - 173
Target Start/End: Original strand, 3567940 - 3568005
Alignment:
Q  108 ttgaccagtgcacatgcctctacgtacgagccggattagacatccatatttgatgggtcggaaacc 173  Q
    ||||||||||||||| |||||||| | |||||  ||||| ||||||  |||| |||||||||||||    
T  3567940 ttgaccagtgcacatacctctacgcatgagccaaattagtcatccacctttggtgggtcggaaacc 3568005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 20 - 97
Target Start/End: Original strand, 6940505 - 6940582
Alignment:
Q  20 aaccaagttgtttgggctccactagcaaggagctcctaacaaggatgtatccaagaaataccgggttcgacttccagg 97  Q
    ||||||||||||||||||||| | | ||||||||| |  |||||| ||||||   ||||| ||||||||| |||||||    
T  6940505 aaccaagttgtttgggctccagtggtaaggagctcattccaaggaggtatccggaaaatatcgggttcgatttccagg 6940582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 19 - 80
Target Start/End: Complemental strand, 10535567 - 10535506
Alignment:
Q  19 caaccaagttgtttgggctccactagcaaggagctcctaacaaggatgtatccaagaaatac 80  Q
    |||||||||||||||| ||||| | |||||||||||||  |||||| |||||| || |||||    
T  10535567 caaccaagttgtttggactccagtggcaaggagctccttccaaggacgtatccgaggaatac 10535506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 20 - 89
Target Start/End: Original strand, 13085471 - 13085540
Alignment:
Q  20 aaccaagttgtttgggctccactagcaaggagctcctaacaaggatgtatccaagaaataccgggttcga 89  Q
    |||||| |||||||||||||| | || ||||||||||  |||||| ||||||  | ||||||||||||||    
T  13085471 aaccaacttgtttgggctccagtggcgaggagctccttccaaggacgtatccggggaataccgggttcga 13085540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 19 - 68
Target Start/End: Original strand, 17845679 - 17845728
Alignment:
Q  19 caaccaagttgtttgggctccactagcaaggagctcctaacaaggatgta 68  Q
    |||||||||||||||||||||| | |||| ||||||||  ||||||||||    
T  17845679 caaccaagttgtttgggctccagtggcaatgagctccttccaaggatgta 17845728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 20 - 176
Target Start/End: Complemental strand, 24938725 - 24938568
Alignment:
Q  20 aaccaagttgtttgggctccactagcaaggagctcctaacaaggatgtatccaagaaataccgggttcgacttccagg-gaaaaaatatttgaccagtgc 118  Q
    ||||||||||||||||||||| | ||||||||||||   ||||||  || ||    |||||| ||||||| ||| ||  |||| || | |||  || |||    
T  24938725 aaccaagttgtttgggctccagtggcaaggagctccctccaaggacatacccggagaataccaggttcgatttctagatgaaacaacacttggtcaatgc 24938626  T
Q  119 acatgcctctacgtacgagccggattagacatccatatttgatgggtcggaaaccggt 176  Q
     |||||||||||| | || ||||||||| ||||||  |||||||| ||||||||||||    
T  24938625 gcatgcctctacgcatgaaccggattagtcatccacctttgatggatcggaaaccggt 24938568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 52; Significance: 1e-20; HSPs: 35)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 20 - 178
Target Start/End: Original strand, 42086271 - 42086430
Alignment:
Q  20 aaccaagttgtttgggctccactagcaaggagctcctaacaaggatgtatccaagaaataccgggttcgacttccagggaaaa-aatatttgaccagtgc 118  Q
    |||||||||| |||||||||  | |||||||||||||  |||||| ||| || || |||||||||||||| | ||||||  || ||   |||||||||||    
T  42086271 aaccaagttgcttgggctccggtggcaaggagctccttccaaggacgtacccgaggaataccgggttcgattcccagggggaacaacgcttgaccagtgc 42086370  T
Q  119 acatgcctctacgtacgagccggattagacatccatatttgatgggtcggaaaccggtgc 178  Q
     |||||||||||| | |||||||||||| | ||||  |||| ||||||||||||||||||    
T  42086371 gcatgcctctacgcatgagccggattagtcgtccacctttggtgggtcggaaaccggtgc 42086430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 20 - 178
Target Start/End: Original strand, 8513463 - 8513622
Alignment:
Q  20 aaccaagttgtttgggctccactagcaaggagctcctaacaaggatgtatccaagaaataccgggttcgacttccagggaaaa-aatatttgaccagtgc 118  Q
    |||||||||| |||| ||| | | |||||||||||||  |||||| ||| ||  | |||||||||||||| | | |||| ||| |||  ||| |||||||    
T  8513463 aaccaagttgcttggactcaagtggcaaggagctccttccaaggacgtacccggggaataccgggttcgattcctaggggaaacaatgcttggccagtgc 8513562  T
Q  119 acatgcctctacgtacgagccggattagacatccatatttgatgggtcggaaaccggtgc 178  Q
    ||||||||||||| ||||||| |||||| | ||||  |||| ||||||||||||||||||    
T  8513563 acatgcctctacgcacgagccagattagtcgtccacctttggtgggtcggaaaccggtgc 8513622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 20 - 178
Target Start/End: Complemental strand, 41163622 - 41163464
Alignment:
Q  20 aaccaagttgtttgggctccactagcaaggagctcctaacaaggatgtatccaagaaataccgggttcgacttccagggaaaaaatatttgaccagtgca 119  Q
    ||||||||||||||||||||| | |||||||||||||  |||| | ||| ||  | |||||||||||||| | |||||| || ||  |||| ||||||||    
T  41163622 aaccaagttgtttgggctccagtggcaaggagctccttccaagaacgtacccggggaataccgggttcgattcccaggggaacaacgtttggccagtgca 41163523  T
Q  120 catgcctctacgtacgagccggattagacatccatatttgatgggtcggaaaccggtgc 178  Q
    |||| ||||||| | |||| ||||||| | ||||  |||  |||||||||||| |||||    
T  41163522 catgtctctacgcatgagctggattagtcgtccaccttttgtgggtcggaaactggtgc 41163464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 20 - 178
Target Start/End: Original strand, 1538375 - 1538534
Alignment:
Q  20 aaccaagttgtttgggctccactagcaaggagctcctaacaaggatgtatccaagaaataccgggttcgacttcca-gggaaaaaatatttgaccagtgc 118  Q
    ||||||||||||||||||||| | |||||||||||||  | |||| |||| |  | |||||||||||||| | ||| ||| || || | ||| |||||||    
T  1538375 aaccaagttgtttgggctccagtggcaaggagctccttccgaggacgtattcggggaataccgggttcgattcccagggggaacaacacttggccagtgc 1538474  T
Q  119 acatgcctctacgtacgagccggattagacatccatatttgatgggtcggaaaccggtgc 178  Q
     |||||||||||| | |||||||||||  | ||||   ||| ||||||||||||||||||    
T  1538475 gcatgcctctacgcatgagccggattaatcgtccaccattggtgggtcggaaaccggtgc 1538534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 20 - 178
Target Start/End: Original strand, 20525782 - 20525941
Alignment:
Q  20 aaccaagttgtttgggctccactagcaaggagctcctaacaaggatgtatccaagaaataccgggttcgacttccagg-gaaaaaatatttgaccagtgc 118  Q
    |||||||||| |||||||||| | |||||||||||||  |||||||||||||  | |||| ||||||||| | ||||| | || || | ||  |||||||    
T  20525782 aaccaagttgcttgggctccagtggcaaggagctcctttcaaggatgtatccggggaatatcgggttcgattcccaggtggaacaacacttcgccagtgc 20525881  T
Q  119 acatgcctctacgtacgagccggattagacatccatatttgatgggtcggaaaccggtgc 178  Q
     |||||||||||| | |||||||||||| | ||||   ||| ||| ||||||||||||||    
T  20525882 gcatgcctctacgcatgagccggattagtcgtccaccattggtggatcggaaaccggtgc 20525941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 112 - 178
Target Start/End: Complemental strand, 42291575 - 42291509
Alignment:
Q  112 ccagtgcacatgcctctacgtacgagccggattagacatccatatttgatgggtcggaaaccggtgc 178  Q
    |||||||||||||||||||| |||||||||||||| | ||||  |||||||| ||||||||||||||    
T  42291575 ccagtgcacatgcctctacgcacgagccggattagtcgtccacctttgatggatcggaaaccggtgc 42291509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 74 - 178
Target Start/End: Original strand, 21375350 - 21375454
Alignment:
Q  74 gaaataccgggttcgacttccagggaaaaaatatttgaccagtgcacatgcctctacgtacgagccggattagacatccatatttgatgggtcggaaacc 173  Q
    |||||| ||||||||||| ||| || || || ||||||||||||| ||||| |||||| | ||| |||||||| | ||||| |||||||| |||||||||    
T  21375350 gaaatatcgggttcgactcccaagggaacaacatttgaccagtgcgcatgcttctacgcatgagtcggattagtcgtccatctttgatggatcggaaacc 21375449  T
Q  174 ggtgc 178  Q
     ||||    
T  21375450 agtgc 21375454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 20 - 178
Target Start/End: Complemental strand, 5732083 - 5731924
Alignment:
Q  20 aaccaagttgtttgggctccactagcaaggagctcctaacaaggatgtatccaagaaataccgggttcgacttccagg-gaaaaaatatttgaccagtgc 118  Q
    |||||||||| |||||||||| | |||||||||||||  |||||| ||| ||  | |||||||||||||| | ||||| | || ||   ||| |||||||    
T  5732083 aaccaagttgcttgggctccagtggcaaggagctccttccaaggacgtacccggggaataccgggttcgattcccaggaggaacaacgcttggccagtgc 5731984  T
Q  119 acatgcctctacgtacgagccggattagacatccatatttgatgggtcggaaaccggtgc 178  Q
     |||||||||||||| ||||| |||||| | | ||  |||  ||||||||||||||||||    
T  5731983 gcatgcctctacgtatgagccagattagtcgttcacctttagtgggtcggaaaccggtgc 5731924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 20 - 146
Target Start/End: Original strand, 19572668 - 19572795
Alignment:
Q  20 aaccaagttgtttgggctccactagcaaggagctcctaacaaggatgtatccaagaaataccgggttcgacttcca-gggaaaaaatatttgaccagtgc 118  Q
    |||||||||| |||||||||| | |||||||||||||  |||||| ||||||  | ||||||||||| || | ||| ||| || || | ||| |||||||    
T  19572668 aaccaagttgcttgggctccagtggcaaggagctccttccaaggacgtatccggggaataccgggttagattcccagggggaacaacacttggccagtgc 19572767  T
Q  119 acatgcctctacgtacgagccggattag 146  Q
     |||||||||||| | ||||||||||||    
T  19572768 gcatgcctctacgcatgagccggattag 19572795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 19 - 145
Target Start/End: Original strand, 24498926 - 24499052
Alignment:
Q  19 caaccaagttgtttgggctccactagcaaggagctcctaacaaggatgtatccaagaaataccgggttcgacttccagggaaaaaatatttgaccagtgc 118  Q
    ||||| |||||||||||||| | |||||||||||||||  |||||| |||||     |||| ||||||||| ||| | | ||| ||   |||| ||||||    
T  24498926 caaccgagttgtttgggctctagtagcaaggagctccttccaaggacgtatctggagaatatcgggttcgatttctaagaaaataacgcttgatcagtgc 24499025  T
Q  119 acatgcctctacgtacgagccggatta 145  Q
     ||||||||||||||||||||||||||    
T  24499026 gcatgcctctacgtacgagccggatta 24499052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 112 - 182
Target Start/End: Complemental strand, 39099849 - 39099779
Alignment:
Q  112 ccagtgcacatgcctctacgtacgagccggattagacatccatatttgatgggtcggaaaccggtgcaaaa 182  Q
    |||||||||||||||||||| | |||||||||||| |  |||  |||| ||||||||||||||||||||||    
T  39099849 ccagtgcacatgcctctacgcatgagccggattagtcgcccacctttggtgggtcggaaaccggtgcaaaa 39099779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 20 - 178
Target Start/End: Complemental strand, 42861381 - 42861222
Alignment:
Q  20 aaccaagttgtttgggctccactagcaaggagctcctaacaaggatgtatccaagaaataccgggttcgacttcc-agggaaaaaatatttgaccagtgc 118  Q
    |||||| |||||||||||||| | ||||||||||| |  ||||||  |||||  | |||| ||||||| | |||| ||||||| || | ||| |||||||    
T  42861381 aaccaaattgtttgggctccagtggcaaggagctcattccaaggacatatccggggaatatcgggttcaatttcccagggaaacaacacttggccagtgc 42861282  T
Q  119 acatgcctctacgtacgagccggattagacatccatatttgatgggtcggaaaccggtgc 178  Q
     |||||||||||| | |||||||||||  | ||||   ||| ||||||||| ||||||||    
T  42861281 gcatgcctctacgcatgagccggattaatcgtccaccattggtgggtcggagaccggtgc 42861222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 108 - 182
Target Start/End: Complemental strand, 3653988 - 3653914
Alignment:
Q  108 ttgaccagtgcacatgcctctacgtacgagccggattagacatccatatttgatgggtcggaaaccggtgcaaaa 182  Q
    ||||||||||| |||||||||||| ||||| |||||||| | ||||  |||| ||| ||| ||||||||||||||    
T  3653988 ttgaccagtgcgcatgcctctacgcacgaggcggattagtcgtccacctttggtggatcgaaaaccggtgcaaaa 3653914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 44 - 177
Target Start/End: Complemental strand, 11845940 - 11845806
Alignment:
Q  44 gcaaggagctcctaacaaggatgtatccaagaaataccgggttcgacttccagggaaaa-aatatttgaccagtgcacatgcctctacgtacgagccgga 142  Q
    |||||||||||||  |||||| ||| || ||||||| ||||||||| ||| ||||  || ||  |||| ||||||| |||||||||||||| |||||| |    
T  11845940 gcaaggagctccttccaaggacgtacccgagaaatatcgggttcgatttcgagggggaacaacgtttggccagtgcgcatgcctctacgtatgagccgaa 11845841  T
Q  143 ttagacatccatatttgatgggtcggaaaccggtg 177  Q
    |||  |  |||  |||||||||| |||||||||||    
T  11845840 ttaatcgcccacctttgatgggttggaaaccggtg 11845806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 76 - 146
Target Start/End: Complemental strand, 38897825 - 38897755
Alignment:
Q  76 aataccgggttcgacttccagggaaaaaatatttgaccagtgcacatgcctctacgtacgagccggattag 146  Q
    |||||||||||||| |||||||| || ||   ||| ||||||| |||||||||||| ||||||||||||||    
T  38897825 aataccgggttcgatttccaggggaacaacgcttggccagtgcgcatgcctctacgcacgagccggattag 38897755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 112 - 178
Target Start/End: Original strand, 43399165 - 43399231
Alignment:
Q  112 ccagtgcacatgcctctacgtacgagccggattagacatccatatttgatgggtcggaaaccggtgc 178  Q
    ||||||| |||||||||||| |||||| ||||||| | |||| ||||| | ||||||||||||||||    
T  43399165 ccagtgcgcatgcctctacgcacgagcaggattagtcgtccacatttggttggtcggaaaccggtgc 43399231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 108 - 177
Target Start/End: Original strand, 41801010 - 41801079
Alignment:
Q  108 ttgaccagtgcacatgcctctacgtacgagccggattagacatccatatttgatgggtcggaaaccggtg 177  Q
    ||||||| ||| |||| ||||||| |||||||||||||| | | ||| |||||||||||||||| |||||    
T  41801010 ttgaccaatgcgcatgtctctacgcacgagccggattagtcgttcatctttgatgggtcggaaagcggtg 41801079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 18 - 70
Target Start/End: Original strand, 23383590 - 23383642
Alignment:
Q  18 acaaccaagttgtttgggctccactagcaaggagctcctaacaaggatgtatc 70  Q
    ||||||||||||||||||||||| | |||||||||||||  |||||| |||||    
T  23383590 acaaccaagttgtttgggctccagtggcaaggagctccttccaaggacgtatc 23383642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 107 - 171
Target Start/End: Original strand, 24875377 - 24875441
Alignment:
Q  107 tttgaccagtgcacatgcctctacgtacgagccggattagacatccatatttgatgggtcggaaa 171  Q
    |||||||||||| |||| ||||||| |||||||||||||  | ||||  ||||||||||||||||    
T  24875377 tttgaccagtgcgcatgtctctacgcacgagccggattaatcgtccacctttgatgggtcggaaa 24875441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 20 - 184
Target Start/End: Original strand, 37263185 - 37263349
Alignment:
Q  20 aaccaagttgtttgggctccactagcaaggagctcctaacaaggatgtatccaagaaataccgggttcgacttccagggaaaaaatatttgaccagtgca 119  Q
    |||||||||| |||||||||| | |||||||| ||||   ||||| ||| ||  | |||| ||||||||| |  ||||| || ||   ||| ||| |||     
T  37263185 aaccaagttgcttgggctccagtggcaaggagttccttctaaggacgtacccggggaatatcgggttcgattctcaggggaacaacgcttggccaatgcg 37263284  T
Q  120 catgcctctacgtacgagccggattagacatccatatttgatgggtcggaaaccggtgcaaaata 184  Q
    |||||||||||| |||||||||||||| | ||||  |||  ||| |||||||||||||| |||||    
T  37263285 catgcctctacgcacgagccggattagtcgtccacctttattggatcggaaaccggtgcgaaata 37263349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 20 - 178
Target Start/End: Original strand, 30349523 - 30349682
Alignment:
Q  20 aaccaagttgtttgggctccactagcaaggagctcctaacaaggatgtatccaagaaataccgggttcgacttcca-gggaaaaaatatttgaccagtgc 118  Q
    ||||||||||||||||||||| | |||||||| ||||  |||||| ||||||  | ||||||||||| || ||| | ||| || |||  ||| |||||||    
T  30349523 aaccaagttgtttgggctccagtggcaaggagttccttccaaggacgtatccggggaataccgggtttgatttctagggggaacaatgattggccagtgc 30349622  T
Q  119 acatgcctctacgtacgagccggattagacatccatatttgatgggtcggaaaccggtgc 178  Q
     |||||||||| | | |||| | ||||| | ||||  || | |||| |||||||||||||    
T  30349623 gcatgcctctatgcatgagctgaattagtcgtccaccttaggtgggccggaaaccggtgc 30349682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 112 - 178
Target Start/End: Original strand, 9805041 - 9805107
Alignment:
Q  112 ccagtgcacatgcctctacgtacgagccggattagacatccatatttgatgggtcggaaaccggtgc 178  Q
    ||||||| |||||||||||| | |||||||||||| | ||||  |||| |||||||||||| |||||    
T  9805041 ccagtgcgcatgcctctacgcatgagccggattagtcgtccacctttggtgggtcggaaacaggtgc 9805107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 20 - 98
Target Start/End: Complemental strand, 18136443 - 18136365
Alignment:
Q  20 aaccaagttgtttgggctccactagcaaggagctcctaacaaggatgtatccaagaaataccgggttcgacttccaggg 98  Q
    ||||||||||||||||||||| | |||||||||||||  ||| || ||||||    |||||||||||||| | ||||||    
T  18136443 aaccaagttgtttgggctccagtggcaaggagctccttccaaagacgtatccggagaataccgggttcgattcccaggg 18136365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 120 - 174
Target Start/End: Complemental strand, 27648487 - 27648433
Alignment:
Q  120 catgcctctacgtacgagccggattagacatccatatttgatgggtcggaaaccg 174  Q
    |||||||||||||| |||||||||||| | ||||| |||| ||| ||||||||||    
T  27648487 catgcctctacgtatgagccggattagtcgtccatctttggtggatcggaaaccg 27648433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 20 - 141
Target Start/End: Original strand, 28857072 - 28857194
Alignment:
Q  20 aaccaagttgtttgggctccactagcaaggagctcctaacaaggatgtatccaagaaataccgggttcgacttcca-gggaaaaaatatttgaccagtgc 118  Q
    |||||||||| |||||||||| | |||||||||||||  |||||| | | ||  | |||||||||||||| | ||| ||| || || | ||| |||||||    
T  28857072 aaccaagttgcttgggctccagtggcaaggagctccttccaaggacgcacccggggaataccgggttcgattcccagggggaacaacacttggccagtgc 28857171  T
Q  119 acatgcctctacgtacgagccgg 141  Q
     |||||||||||| | |||||||    
T  28857172 gcatgcctctacgcatgagccgg 28857194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 20 - 89
Target Start/End: Complemental strand, 6767214 - 6767145
Alignment:
Q  20 aaccaagttgtttgggctccactagcaaggagctcctaacaaggatgtatccaagaaataccgggttcga 89  Q
    |||||||||| |||||||||| | |||||||||||||  |||||| ||| ||  | ||||||||||||||    
T  6767214 aaccaagttgcttgggctccagtggcaaggagctccttccaaggacgtacccggggaataccgggttcga 6767145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 20 - 89
Target Start/End: Original strand, 7866525 - 7866594
Alignment:
Q  20 aaccaagttgtttgggctccactagcaaggagctcctaacaaggatgtatccaagaaataccgggttcga 89  Q
    |||||||||| |||| ||||| | |||||||||||||  |||||| ||| || || ||||||||||||||    
T  7866525 aaccaagttgcttggactccagtggcaaggagctccttccaaggacgtacccgaggaataccgggttcga 7866594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 20 - 89
Target Start/End: Original strand, 9812816 - 9812885
Alignment:
Q  20 aaccaagttgtttgggctccactagcaaggagctcctaacaaggatgtatccaagaaataccgggttcga 89  Q
    ||||||||||||||| ||||| | |||||||||||||  |||||| ||| ||  | ||||||||||||||    
T  9812816 aaccaagttgtttggactccagtggcaaggagctccttccaaggacgtacccggggaataccgggttcga 9812885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 20 - 89
Target Start/End: Original strand, 12704958 - 12705027
Alignment:
Q  20 aaccaagttgtttgggctccactagcaaggagctcctaacaaggatgtatccaagaaataccgggttcga 89  Q
    ||||||||||||||| ||||| | |||||||||||||  |||||| ||| ||  | ||||||||||||||    
T  12704958 aaccaagttgtttggactccagtggcaaggagctccttccaaggacgtacccggggaataccgggttcga 12705027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 73 - 146
Target Start/End: Original strand, 25452923 - 25452996
Alignment:
Q  73 agaaataccgggttcgacttccagggaaaaaatatttgaccagtgcacatgcctctacgtacgagccggattag 146  Q
    |||||||||| |||  | || ||||| || ||| |||||||||||  |||||||||||| ||||||||||||||    
T  25452923 agaaataccgagtttaattttcaggggaacaatgtttgaccagtgtgcatgcctctacgcacgagccggattag 25452996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 120 - 177
Target Start/End: Original strand, 27484206 - 27484263
Alignment:
Q  120 catgcctctacgtacgagccggattagacatccatatttgatgggtcggaaaccggtg 177  Q
    |||||||||||| | || ||||||||||| ||||| |||||| ||| |||||||||||    
T  27484206 catgcctctacgcatgaaccggattagacgtccatctttgataggttggaaaccggtg 27484263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 20 - 89
Target Start/End: Complemental strand, 35403675 - 35403606
Alignment:
Q  20 aaccaagttgtttgggctccactagcaaggagctcctaacaaggatgtatccaagaaataccgggttcga 89  Q
    |||||| |||||||||||||| | |||||||||||||  |||||| |||  |  ||||||||||||||||    
T  35403675 aaccaacttgtttgggctccagtggcaaggagctccttccaaggacgtactcgggaaataccgggttcga 35403606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 114 - 182
Target Start/End: Complemental strand, 6764525 - 6764457
Alignment:
Q  114 agtgcacatgcctctacgtacgagccggattagacatccatatttgatgggtcggaaaccggtgcaaaa 182  Q
    ||||| |||||||||||| |||||||||||||| |  | || |||| |||||||||||| |||| ||||    
T  6764525 agtgcgcatgcctctacgcacgagccggattagtcgcctatctttgttgggtcggaaactggtgaaaaa 6764457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 106 - 146
Target Start/End: Complemental strand, 14974400 - 14974360
Alignment:
Q  106 atttgaccagtgcacatgcctctacgtacgagccggattag 146  Q
    ||||| |||||||||||||||||||| | ||||||||||||    
T  14974400 atttggccagtgcacatgcctctacgcatgagccggattag 14974360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 23 - 95
Target Start/End: Original strand, 18327717 - 18327789
Alignment:
Q  23 caagttgtttgggctccactagcaaggagctcctaacaaggatgtatccaagaaataccgggttcgacttcca 95  Q
    |||||| ||||| ||||| | |||||||||||||  |||||| |||| || ||||||| |||||||| |||||    
T  18327717 caagttttttggactccagtggcaaggagctccttccaaggacgtattcaggaaatactgggttcgatttcca 18327789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 49; Significance: 8e-19; HSPs: 30)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 19 - 178
Target Start/End: Original strand, 33647668 - 33647828
Alignment:
Q  19 caaccaagttgtttgggctccactagcaaggagctcctaacaaggatgtatccaagaaataccgggttcgacttccaggga-aaaaatatttgaccagtg 117  Q
    ||||||||||| |||||||| | | |||||||||||||  |||||| |||||   | |||||||||||||| ||||||||| || ||   ||||||||||    
T  33647668 caaccaagttgcttgggctctagtggcaaggagctcctttcaaggacgtatctggggaataccgggttcgatttccagggagaacaacgcttgaccagtg 33647767  T
Q  118 cacatgcctctacgtacgagccggattagacatccatatttgatgggtcggaaaccggtgc 178  Q
    ||||| |||||||| |||| || |||||| | | ||| |||| ||| ||||||||||||||    
T  33647768 cacattcctctacgcacgaaccagattagtcgttcatctttggtggatcggaaaccggtgc 33647828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 20 - 178
Target Start/End: Original strand, 24166398 - 24166557
Alignment:
Q  20 aaccaagttgtttgggctccactagcaaggagctcctaacaaggatgtatccaagaaataccgggttcgacttcca-gggaaaaaatatttgaccagtgc 118  Q
    |||||||||| |||||||||| | |||||||||||||  |||||| |||  |  | ||||| |||||||| | ||| |||||| ||  |||| |||||||    
T  24166398 aaccaagttgattgggctccagtggcaaggagctccttccaaggacgtactcggggaatactgggttcgattcccaagggaaacaacgtttggccagtgc 24166497  T
Q  119 acatgcctctacgtacgagccggattagacatccatatttgatgggtcggaaaccggtgc 178  Q
     |||||||||||| ||||||| |||||| || |||  |||||||| ||||||||||||||    
T  24166498 gcatgcctctacgcacgagccagattagtcacccacctttgatggatcggaaaccggtgc 24166557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 20 - 178
Target Start/End: Original strand, 29895735 - 29895894
Alignment:
Q  20 aaccaagttgtttgggctccactagcaaggagctcctaacaaggatgtatccaagaaataccgggttcgacttcca-gggaaaaaatatttgaccagtgc 118  Q
    |||||||||| |||||||||| | |||||||||||||  |||||| ||||||  | |||||||||||||| | ||| ||| || || | ||| |||||||    
T  29895735 aaccaagttgcttgggctccagtggcaaggagctccttccaaggacgtatccggggaataccgggttcgattcccagggggaacaacacttggccagtgc 29895834  T
Q  119 acatgcctctacgtacgagccggattagacatccatatttgatgggtcggaaaccggtgc 178  Q
     |||||||||||| | |||||||||||| | ||||   ||| ||| ||||||||||||||    
T  29895835 gcatgcctctacgcatgagccggattagtcgtccaccattggtggttcggaaaccggtgc 29895894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 20 - 178
Target Start/End: Original strand, 38165975 - 38166134
Alignment:
Q  20 aaccaagttgtttgggctccactagcaaggagctcctaacaaggatgtatccaagaaataccgggttcgacttcca-gggaaaaaatatttgaccagtgc 118  Q
    ||||||||||||||||||||||| |||||||||||||  |||||| ||||||  | ||||| ||||| || | ||| ||| || ||   ||| |||||||    
T  38165975 aaccaagttgtttgggctccactggcaaggagctccttccaaggacgtatccggggaatactgggttggattcccagggggaacaacgcttggccagtgc 38166074  T
Q  119 acatgcctctacgtacgagccggattagacatccatatttgatgggtcggaaaccggtgc 178  Q
     |||| ||||||| |||||||||||||| |  |||  |||| ||||||||||||||||||    
T  38166075 gcatggctctacgcacgagccggattagtcgcccacctttggtgggtcggaaaccggtgc 38166134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 20 - 146
Target Start/End: Original strand, 1446774 - 1446901
Alignment:
Q  20 aaccaagttgtttgggctccactagcaaggagctcctaacaaggatgtatccaagaaataccgggttcgacttcca-gggaaaaaatatttgaccagtgc 118  Q
    |||||||||| |||||||||| | |||||||||||||  |||||| ||||||  | |||||||||||||| | ||| ||| || || | ||| |||||||    
T  1446774 aaccaagttgcttgggctccagtggcaaggagctccttccaaggacgtatccggggaataccgggttcgattcccagggggaacaacacttggccagtgc 1446873  T
Q  119 acatgcctctacgtacgagccggattag 146  Q
     |||||||||||| | ||||||||||||    
T  1446874 gcatgcctctacgcatgagccggattag 1446901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 20 - 145
Target Start/End: Original strand, 53599008 - 53599134
Alignment:
Q  20 aaccaagttgtttgggctccactagcaaggagctcctaacaaggatgtatccaagaaataccgggttcgacttccagg-gaaaaaatatttgaccagtgc 118  Q
    ||||||||||||||||||||| | |||||||||||||  |||||| ||| ||  | |||||||||||||| | ||||| | || ||  |||| |||||||    
T  53599008 aaccaagttgtttgggctccattggcaaggagctccttccaaggacgtacccggggaataccgggttcgattcccaggaggaacaacgtttggccagtgc 53599107  T
Q  119 acatgcctctacgtacgagccggatta 145  Q
     |||||||||||| | |||||||||||    
T  53599108 gcatgcctctacgcatgagccggatta 53599134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 18 - 146
Target Start/End: Original strand, 47078404 - 47078533
Alignment:
Q  18 acaaccaagttgtttgggctccactagcaaggagctcctaacaaggatgtatccaagaaataccgggttcgacttccagggaaaa-aatatttgaccagt 116  Q
    |||||||||||| ||||| |||| | |||||||||||||  |||||| ||| ||  | |||||||||||||| | ||||||  || ||   ||| |||||    
T  47078404 acaaccaagttgcttgggttccagtggcaaggagctccttccaaggacgtacccggggaataccgggttcgattcccagggggaacaacgcttggccagt 47078503  T
Q  117 gcacatgcctctacgtacgagccggattag 146  Q
    ||||||||||||||| ||||||||||||||    
T  47078504 gcacatgcctctacgcacgagccggattag 47078533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 20 - 178
Target Start/End: Original strand, 2559255 - 2559414
Alignment:
Q  20 aaccaagttgtttgggctccactagcaaggagctcctaacaaggatgtatccaagaaataccgggttcgacttccagg-gaaaaaatatttgaccagtgc 118  Q
    ||||||||||||||||||||| | |||| ||||||||  |||||| ||| |   | |||||||| ||||| ||| ||| | || ||   ||| |||||||    
T  2559255 aaccaagttgtttgggctccagtggcaacgagctccttccaaggacgtacctggggaataccggattcgatttctaggaggaacaacgcttggccagtgc 2559354  T
Q  119 acatgcctctacgtacgagccggattagacatccatatttgatgggtcggaaaccggtgc 178  Q
     |||||||||||| || ||||||||||  | ||||  |||| ||||||||||||||||||    
T  2559355 gcatgcctctacgcacaagccggattactcgtccacctttggtgggtcggaaaccggtgc 2559414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 20 - 146
Target Start/End: Complemental strand, 3574609 - 3574482
Alignment:
Q  20 aaccaagttgtttgggctccactagcaaggagctcctaacaaggatgtatccaagaaataccgggttcgacttccaggga-aaaaatatttgaccagtgc 118  Q
    |||||||||| |||||||||| | |||||||||||||  |||||| ||| | | | ||||||| |||| | | ||||||| || || | ||| |||||||    
T  3574609 aaccaagttgcttgggctccagtggcaaggagctccttccaaggacgtacctagggaataccgagttcaattcccagggagaacaacacttggccagtgc 3574510  T
Q  119 acatgcctctacgtacgagccggattag 146  Q
     |||||||||||| ||||| ||||||||    
T  3574509 gcatgcctctacgcacgagtcggattag 3574482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 20 - 182
Target Start/End: Original strand, 8888970 - 8889133
Alignment:
Q  20 aaccaagttgtttgggctccactagcaaggagctcctaacaaggatgtatccaagaaataccgggttcgacttccagggaaaa-aatatttgaccagtgc 118  Q
    ||||||||||||||||||| |   |||||||||||||   ||||| ||||||  | |||||||||||||| | | ||||  || || | |||  ||||||    
T  8888970 aaccaagttgtttgggctctagcggcaaggagctccttctaaggacgtatccggggaataccgggttcgattcctagggggaacaacacttgggcagtgc 8889069  T
Q  119 acatgcctctacgtacgagccggattagacatccatatttgatgggtcggaaaccggtgcaaaa 182  Q
     |||| ||||||| | |||||||||||| | ||||  |||| ||||||||||||||||| ||||    
T  8889070 gcatggctctacgcatgagccggattagtcgtccacctttggtgggtcggaaaccggtgtaaaa 8889133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 107 - 178
Target Start/End: Original strand, 14859327 - 14859398
Alignment:
Q  107 tttgaccagtgcacatgcctctacgtacgagccggattagacatccatatttgatgggtcggaaaccggtgc 178  Q
    |||||||||||| |||| ||||||| ||||||| |||||| ||||||  ||||||| ||||||||| |||||    
T  14859327 tttgaccagtgcgcatgtctctacgcacgagccagattagtcatccacctttgatgtgtcggaaactggtgc 14859398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 108 - 178
Target Start/End: Complemental strand, 6032717 - 6032647
Alignment:
Q  108 ttgaccagtgcacatgcctctacgtacgagccggattagacatccatatttgatgggtcggaaaccggtgc 178  Q
    ||||||||||| |||||||||||| | |||||||||||| | || |  |||| ||||||||||||||||||    
T  6032717 ttgaccagtgctcatgcctctacgaatgagccggattagtcgtctacctttggtgggtcggaaaccggtgc 6032647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 112 - 174
Target Start/End: Original strand, 43458654 - 43458716
Alignment:
Q  112 ccagtgcacatgcctctacgtacgagccggattagacatccatatttgatgggtcggaaaccg 174  Q
    ||||||| |||||||||||| |||||||||||||| | ||||  ||||||| |||||||||||    
T  43458654 ccagtgcgcatgcctctacggacgagccggattagtcgtccacctttgatgagtcggaaaccg 43458716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 112 - 182
Target Start/End: Complemental strand, 49260735 - 49260665
Alignment:
Q  112 ccagtgcacatgcctctacgtacgagccggattagacatccatatttgatgggtcggaaaccggtgcaaaa 182  Q
    ||||||| |||||||||||| |||||||||||||| |  |||  |||| ||||||||||| ||||||||||    
T  49260735 ccagtgcgcatgcctctacgcacgagccggattagtcgaccacctttggtgggtcggaaatcggtgcaaaa 49260665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 113 - 178
Target Start/End: Complemental strand, 40780930 - 40780865
Alignment:
Q  113 cagtgcacatgcctctacgtacgagccggattagacatccatatttgatgggtcggaaaccggtgc 178  Q
    |||||| |||||||||||| | |||||||||||| | ||||  |||| ||||||||||||||||||    
T  40780930 cagtgcgcatgcctctacgcatgagccggattagtcgtccacctttggtgggtcggaaaccggtgc 40780865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 93 - 182
Target Start/End: Original strand, 46108713 - 46108802
Alignment:
Q  93 ccagggaaaaaatatttgaccagtgcacatgcctctacgtacgagccggattagacatccatatttgatgggtcggaaaccggtgcaaaa 182  Q
    |||||| || || ||||| | ||||| |||||||||||| | ||||| |||||| | ||||  ||||||||||||||||||| |||||||    
T  46108713 ccaggggaacaacatttggctagtgcgcatgcctctacgcatgagccagattagtcgtccacttttgatgggtcggaaaccgatgcaaaa 46108802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 19 - 87
Target Start/End: Original strand, 4736544 - 4736612
Alignment:
Q  19 caaccaagttgtttgggctccactagcaaggagctcctaacaaggatgtatccaagaaataccgggttc 87  Q
    ||||||||||||||| |||||| | |||| ||||||||  |||||||||| || || ||||||||||||    
T  4736544 caaccaagttgtttgagctccagtggcaatgagctcctttcaaggatgtacccgaggaataccgggttc 4736612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 20 - 56
Target Start/End: Complemental strand, 26480112 - 26480076
Alignment:
Q  20 aaccaagttgtttgggctccactagcaaggagctcct 56  Q
    ||||||||||||||||||||||| |||||||||||||    
T  26480112 aaccaagttgtttgggctccactggcaaggagctcct 26480076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 20 - 96
Target Start/End: Complemental strand, 41163045 - 41162969
Alignment:
Q  20 aaccaagttgtttgggctccactagcaaggagctcctaacaaggatgtatccaagaaataccgggttcgacttccag 96  Q
    |||||||||| |||||||||| |  ||||||||||||  |||||| ||||||  ||||||||| |||||| ||||||    
T  41163045 aaccaagttgcttgggctccagtgacaaggagctccttccaaggacgtatccgggaaataccgagttcgatttccag 41162969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 107 - 182
Target Start/End: Complemental strand, 14597975 - 14597900
Alignment:
Q  107 tttgaccagtgcacatgcctctacgtacgagccggattagacatccatatttgatgggtcggaaaccggtgcaaaa 182  Q
    |||| ||||||| |||||||||||| |||| | ||||||| | ||||  |||||||| ||| ||||||||||||||    
T  14597975 tttggccagtgcgcatgcctctacgcacgaactggattagtcgtccacctttgatggatcgaaaaccggtgcaaaa 14597900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 18 - 89
Target Start/End: Complemental strand, 34667767 - 34667696
Alignment:
Q  18 acaaccaagttgtttgggctccactagcaaggagctcctaacaaggatgtatccaagaaataccgggttcga 89  Q
    ||||||||||||||||||||| | | |||||||||||||  |||||| ||| ||  | ||||||||||||||    
T  34667767 acaaccaagttgtttgggctctagtggcaaggagctccttccaaggacgtacccggggaataccgggttcga 34667696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 107 - 178
Target Start/End: Complemental strand, 47682457 - 47682386
Alignment:
Q  107 tttgaccagtgcacatgcctctacgtacgagccggattagacatccatatttgatgggtcggaaaccggtgc 178  Q
    |||| |||||||||||| ||||||| ||||||||| |||| |  |||  |||| ||||||||||||||||||    
T  47682457 tttggccagtgcacatgtctctacgcacgagccgggttagtcgcccacctttggtgggtcggaaaccggtgc 47682386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 20 - 98
Target Start/End: Complemental strand, 1940937 - 1940859
Alignment:
Q  20 aaccaagttgtttgggctccactagcaaggagctcctaacaaggatgtatccaagaaataccgggttcgacttccaggg 98  Q
    ||||||||||||||||||| | | |||||||||||||  |||||| ||| ||  |||||| ||||||||| | ||||||    
T  1940937 aaccaagttgtttgggctctagtggcaaggagctccttccaaggacgtacccgggaaatatcgggttcgattcccaggg 1940859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 112 - 178
Target Start/End: Complemental strand, 7246716 - 7246650
Alignment:
Q  112 ccagtgcacatgcctctacgtacgagccggattagacatccatatttgatgggtcggaaaccggtgc 178  Q
    ||||||| |||||||||||| | |||||||||||| |  |||  |||| ||||||||||||||||||    
T  7246716 ccagtgcgcatgcctctacgcatgagccggattagtcgcccacctttggtgggtcggaaaccggtgc 7246650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 108 - 182
Target Start/End: Complemental strand, 8064872 - 8064798
Alignment:
Q  108 ttgaccagtgcacatgcctctacgtacgagccggattagacatccatatttgatgggtcggaaaccggtgcaaaa 182  Q
    ||||||||||| |||||||||||| | |||||||||||| | ||||   || || ||||| ||||||||||||||    
T  8064872 ttgaccagtgcgcatgcctctacgcatgagccggattagtcgtccaccattaataggtcgaaaaccggtgcaaaa 8064798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 108 - 178
Target Start/End: Original strand, 14858747 - 14858817
Alignment:
Q  108 ttgaccagtgcacatgcctctacgtacgagccggattagacatccatatttgatgggtcggaaaccggtgc 178  Q
    ||||||||||| |||| ||||||||||||| | |||||  | ||||  ||||||||||| |||||||||||    
T  14858747 ttgaccagtgcgcatgtctctacgtacgagtcagattattcgtccacctttgatgggtcagaaaccggtgc 14858817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 112 - 178
Target Start/End: Original strand, 16450341 - 16450407
Alignment:
Q  112 ccagtgcacatgcctctacgtacgagccggattagacatccatatttgatgggtcggaaaccggtgc 178  Q
    |||||||||||||||||||| | ||||| |||||| | ||||  |||| | ||||||||||||||||    
T  16450341 ccagtgcacatgcctctacgcatgagccagattagtcgtccacctttggtaggtcggaaaccggtgc 16450407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 76 - 178
Target Start/End: Complemental strand, 48834806 - 48834704
Alignment:
Q  76 aataccgggttcgacttccagggaaaaaatatttgaccagtgcacatgcctctacgtacgagccggattagacatccatatttgatgggtcggaaaccgg 175  Q
    |||||||||||||| |||||||| || |||| | | ||||||||||||||||||   | ||| |||||||| |  | |  |||| |||||||||||||||    
T  48834806 aataccgggttcgatttccaggggaataatactaggccagtgcacatgcctctatacatgagtcggattagtcgcctacctttggtgggtcggaaaccgg 48834707  T
Q  176 tgc 178  Q
    |||    
T  48834706 tgc 48834704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 20 - 89
Target Start/End: Original strand, 27248376 - 27248445
Alignment:
Q  20 aaccaagttgtttgggctccactagcaaggagctcctaacaaggatgtatccaagaaataccgggttcga 89  Q
    |||||||||| |||||||||| | |||| ||||||||  |||||| ||||||  | ||||||||||||||    
T  27248376 aaccaagttgcttgggctccagtggcaacgagctccttccaaggacgtatccggggaataccgggttcga 27248445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 20 - 89
Target Start/End: Complemental strand, 27531820 - 27531751
Alignment:
Q  20 aaccaagttgtttgggctccactagcaaggagctcctaacaaggatgtatccaagaaataccgggttcga 89  Q
    |||||||||| |||| ||||| | |||||||||||||  |||||| ||| ||| | ||||||||||||||    
T  27531820 aaccaagttgcttggactccagtggcaaggagctccttccaaggacgtacccagggaataccgggttcga 27531751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 48; Significance: 3e-18; HSPs: 27)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 20 - 178
Target Start/End: Complemental strand, 14107521 - 14107362
Alignment:
Q  20 aaccaagttgtttgggctccactagcaaggagctcctaacaaggatgtatccaagaaataccgggttcgacttccagg-gaaaaaatatttgaccagtgc 118  Q
    ||||||||||||||||||||| | |||||||||||||  ||| || |||| |  | |||||||||||||| | ||||| | || ||   |||||||||||    
T  14107521 aaccaagttgtttgggctccagtggcaaggagctccttccaaagacgtattcggggaataccgggttcgattcccaggaggaacaacgcttgaccagtgc 14107422  T
Q  119 acatgcctctacgtacgagccggattagacatccatatttgatgggtcggaaaccggtgc 178  Q
    ||||||||||||| | |||||||||||| |  ||||  ||  ||||||||||||||||||    
T  14107421 acatgcctctacgcatgagccggattagtcgcccattattagtgggtcggaaaccggtgc 14107362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 76 - 182
Target Start/End: Original strand, 13391290 - 13391396
Alignment:
Q  76 aataccgggttcgacttccagggaaaaaatatttgaccagtgcacatgcctctacgtacgagccggattagacatccatatttgatgggtcggaaaccgg 175  Q
    |||| ||| ||||| || ||||| || ||| |||| ||||||| |||||||||||| |||||||||||||| |  |||||||| |||||||| |||||||    
T  13391290 aatatcggattcgattttcaggggaacaatgtttggccagtgcgcatgcctctacgcacgagccggattagtcgcccatatttaatgggtcgaaaaccgg 13391389  T
Q  176 tgcaaaa 182  Q
    |||||||    
T  13391390 tgcaaaa 13391396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 20 - 178
Target Start/End: Complemental strand, 29333301 - 29333143
Alignment:
Q  20 aaccaagttgtttgggctccactagcaaggagctcctaacaaggatgtatccaagaaataccgggttcgacttccagggaaaaaatatttgaccagtgca 119  Q
    ||||||||||||||||||| | | |||| ||||||||  |||||| ||| ||| | |||||||||||||| |||||||| || ||  |||| |||||||     
T  29333301 aaccaagttgtttgggctctagtggcaatgagctccttccaaggacgtacccagggaataccgggttcgatttccaggggaacaacgtttggccagtgcg 29333202  T
Q  120 catgcctctacgtacgagccggattagacatccatatttgatgggtcggaaaccggtgc 178  Q
    |||||||||||| | |||||| || || | ||||  |||| | |||||| |||||||||    
T  29333201 catgcctctacgcatgagccgaatcagtcgtccacctttggtaggtcggtaaccggtgc 29333143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 19 - 178
Target Start/End: Complemental strand, 5253387 - 5253227
Alignment:
Q  19 caaccaagttgtttgggctccactagcaaggagctcctaacaaggatgtatccaagaaataccgggttcgacttcca-gggaaaaaatatttgaccagtg 117  Q
    ||||||||||| |||||||||| | |||||||||||||  |||||| ||| ||  | |||||||||||||| | ||| ||| || || | ||| ||||||    
T  5253387 caaccaagttgcttgggctccaatggcaaggagctccttccaaggacgtacccggggaataccgggttcgattcccagggggaacaacacttggccagtg 5253288  T
Q  118 cacatgcctctacgtacgagccggattagacatccatatttgatgggtcggaaaccggtgc 178  Q
    | |||||||||||| | |||||||||||  |  |||  |||| ||||||||||||||||||    
T  5253287 cgcatgcctctacgcatgagccggattaatcgcccacctttggtgggtcggaaaccggtgc 5253227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 20 - 178
Target Start/End: Original strand, 8932608 - 8932767
Alignment:
Q  20 aaccaagttgtttgggctccactagcaaggagctcctaacaaggatgtatccaagaaataccgggttcgacttccagggaaaa-aatatttgaccagtgc 118  Q
    ||||||||||||||  ||||| | |||||||| ||||  |||||||||||||  | |||| ||||||||| | ||||||  || || | ||| | |||||    
T  8932608 aaccaagttgtttgaactccagtggcaaggagttccttccaaggatgtatccggggaatatcgggttcgattcccagggggaacaacacttggctagtgc 8932707  T
Q  119 acatgcctctacgtacgagccggattagacatccatatttgatgggtcggaaaccggtgc 178  Q
     |||||||||||| | |||||||||||  || |||  |||||||||||||||||||||||    
T  8932708 gcatgcctctacgcatgagccggattaatcacccacctttgatgggtcggaaaccggtgc 8932767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 20 - 178
Target Start/End: Original strand, 8944074 - 8944233
Alignment:
Q  20 aaccaagttgtttgggctccactagcaaggagctcctaacaaggatgtatccaagaaataccgggttcgacttccagggaaaa-aatatttgaccagtgc 118  Q
    ||||||||||||||  ||||| | |||||||| ||||  |||||||||||||  | |||| ||||||||| | ||||||  || || | ||| | |||||    
T  8944074 aaccaagttgtttgaactccagtggcaaggagttccttccaaggatgtatccggggaatatcgggttcgattcccagggggaacaacacttggctagtgc 8944173  T
Q  119 acatgcctctacgtacgagccggattagacatccatatttgatgggtcggaaaccggtgc 178  Q
     |||||||||||| | |||||||||||  || |||  |||||||||||||||||||||||    
T  8944174 gcatgcctctacgcatgagccggattaatcacccacctttgatgggtcggaaaccggtgc 8944233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 20 - 178
Target Start/End: Original strand, 19089445 - 19089604
Alignment:
Q  20 aaccaagttgtttgggctccactagcaaggagctcctaacaaggatgtatccaagaaataccgggttcgacttccagggaaaa-aatatttgaccagtgc 118  Q
    |||||||||| |||||||||| | ||||||||||| |  |||||| |||||| || |||||| |||| || | ||||||  || || | ||| ||||||     
T  19089445 aaccaagttgcttgggctccagtcgcaaggagctcatttcaaggacgtatccgaggaataccaggtttgattcccagggggaacaacacttggccagtga 19089544  T
Q  119 acatgcctctacgtacgagccggattagacatccatatttgatgggtcggaaaccggtgc 178  Q
     |||||||||||| |||||||||||||| | || |  |||| ||||||||||||||||||    
T  19089545 gcatgcctctacgcacgagccggattagtcgtctacctttggtgggtcggaaaccggtgc 19089604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 20 - 178
Target Start/End: Original strand, 21898595 - 21898754
Alignment:
Q  20 aaccaagttgtttgggctccactagcaaggagctcctaacaaggatgtatccaagaaataccgggttcgacttccagg-gaaaaaatatttgaccagtgc 118  Q
    |||||||||| |||||||||| | |||||||||||||  |||||| ||||||  | |||||||||||||| | ||||| | || ||   ||| |||||||    
T  21898595 aaccaagttgcttgggctccagtggcaaggagctccttccaaggacgtatccggggaataccgggttcgattcccaggaggaacaacgcttggccagtgc 21898694  T
Q  119 acatgcctctacgtacgagccggattagacatccatatttgatgggtcggaaaccggtgc 178  Q
     |||||||||||| | |||||||||||| | | ||  |||  ||||||||||||||||||    
T  21898695 gcatgcctctacgcatgagccggattagtcgttcacctttagtgggtcggaaaccggtgc 21898754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 20 - 182
Target Start/End: Complemental strand, 2271464 - 2271303
Alignment:
Q  20 aaccaagttgtttgggctccactagcaaggagctcctaacaaggatgtatccaagaaataccgggttcgacttccagggaaaaaatatttgaccagtgca 119  Q
    |||||||||| |||||||||| | |||||||||||||  |||||| |||| |  | |||||||||||||| |  ||| ||| ||   || | |||||||     
T  2271464 aaccaagttgcttgggctccagtggcaaggagctccttccaaggacgtattcggggaataccgggttcgattctcagagaacaacgcttag-ccagtgcg 2271366  T
Q  120 catgcctctacgtacgagccggattagacatccatatttgatgggtcggaaaccggtgcaaaa 182  Q
    |||| ||||||| |||||||||||||| | ||||  ||||||||||| |||||| ||||||||    
T  2271365 catgtctctacgcacgagccggattagtcgtccacctttgatgggtcagaaaccagtgcaaaa 2271303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 20 - 178
Target Start/End: Complemental strand, 6606260 - 6606101
Alignment:
Q  20 aaccaagttgtttgggctccactagcaaggagctcctaacaaggatgtatccaagaaataccgggttcgacttccagggaaaa-aatatttgaccagtgc 118  Q
    |||||||||| ||||||  || | |||||||||||||  |||||| ||||||  | |||||||||||||| |  |||||  || || | ||| ||||||     
T  6606260 aaccaagttgcttgggccacagtggcaaggagctccttccaaggacgtatccggggaataccgggttcgattctcagggggaacaacacttggccagtgt 6606161  T
Q  119 acatgcctctacgtacgagccggattagacatccatatttgatgggtcggaaaccggtgc 178  Q
    ||||||||||||| | |||||||||||| | ||||   ||| ||||||||||||||||||    
T  6606160 acatgcctctacgcatgagccggattagtcgtccaccattggtgggtcggaaaccggtgc 6606101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 23 - 178
Target Start/End: Complemental strand, 13036164 - 13036008
Alignment:
Q  23 caagttgtttgggctccactagcaaggagctcctaacaaggatgtatccaagaaataccgggttcgacttccagggaaaa-aatatttgaccagtgcaca 121  Q
    ||||||| |||||||||| | |||||||||||||  |||||| |||| |  | |||| ||||||||| || |||||  || || | ||| ||||||| ||    
T  13036164 caagttgcttgggctccagtggcaaggagctccttccaaggacgtattcggggaatatcgggttcgattttcagggggaacaacacttggccagtgcgca 13036065  T
Q  122 tgcctctacgtacgagccggattagacatccatatttgatgggtcggaaaccggtgc 178  Q
    |||||||||| | ||||| |||||| | ||||   ||| ||||||||||||||||||    
T  13036064 tgcctctacgcatgagccagattagtcgtccactattggtgggtcggaaaccggtgc 13036008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 20 - 178
Target Start/End: Original strand, 8938658 - 8938817
Alignment:
Q  20 aaccaagttgtttgggctccactagcaaggagctcctaacaaggatgtatccaagaaataccgggttcgacttccagg-gaaaaaatatttgaccagtgc 118  Q
    ||||||||||||||||||||| |  ||||||||||||  ||| ||  |||||  | |||||  ||||||| | ||||| | || || | |||||||||||    
T  8938658 aaccaagttgtttgggctccagtgacaaggagctccttccaaagacatatccggggaatacttggttcgattcccaggaggaacaacacttgaccagtgc 8938757  T
Q  119 acatgcctctacgtacgagccggattagacatccatatttgatgggtcggaaaccggtgc 178  Q
     || || |||||| | |||||| ||||| | ||||  |||||||||||||||||||||||    
T  8938758 gcaagcatctacgcatgagccgaattagtcgtccacctttgatgggtcggaaaccggtgc 8938817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 20 - 98
Target Start/End: Complemental strand, 9179899 - 9179821
Alignment:
Q  20 aaccaagttgtttgggctccactagcaaggagctcctaacaaggatgtatccaagaaataccgggttcgacttccaggg 98  Q
    ||||||||||||||||||||| | ||||||||||| |  |||||| ||| ||| | |||||||||||||| | ||||||    
T  9179899 aaccaagttgtttgggctccagtggcaaggagctcattccaaggacgtacccagggaataccgggttcgattcccaggg 9179821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 112 - 178
Target Start/End: Complemental strand, 9633695 - 9633629
Alignment:
Q  112 ccagtgcacatgcctctacgtacgagccggattagacatccatatttgatgggtcggaaaccggtgc 178  Q
    ||||||| |||||||||||| |||||||||||||| |  |||  |||| ||||||||||||||||||    
T  9633695 ccagtgcgcatgcctctacgcacgagccggattagtcgcccacctttggtgggtcggaaaccggtgc 9633629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 97 - 182
Target Start/End: Original strand, 21872928 - 21873013
Alignment:
Q  97 ggaaaaaatatttgaccagtgcacatgcctctacgtacgagccggattagacatccatatttgatgggtcggaaaccggtgcaaaa 182  Q
    ||||| || ||||| ||| ||||||||| | ||||||||||  ||||||| | ||||  |||||||||||||||||| ||||||||    
T  21872928 ggaaacaacatttggccaatgcacatgcttttacgtacgagttggattagtcgtccacctttgatgggtcggaaaccagtgcaaaa 21873013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 103 - 178
Target Start/End: Complemental strand, 8149876 - 8149801
Alignment:
Q  103 aatatttgaccagtgcacatgcctctacgtacgagccggattagacatccatatttgatgggtcggaaaccggtgc 178  Q
    |||||||||||| |||||||||||||||| |  ||||| ||||| | ||||  |||| ||||| ||||||||||||    
T  8149876 aatatttgaccaatgcacatgcctctacgcattagccgaattagtcgtccacctttggtgggttggaaaccggtgc 8149801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 20 - 87
Target Start/End: Original strand, 22709862 - 22709929
Alignment:
Q  20 aaccaagttgtttgggctccactagcaaggagctcctaacaaggatgtatccaagaaataccgggttc 87  Q
    |||||||||||||||||| || ||||||| |||||||   ||||||||| | ||||||||| ||||||    
T  22709862 aaccaagttgtttgggcttcaatagcaagaagctccttctaaggatgtacctaagaaatacagggttc 22709929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 107 - 178
Target Start/End: Complemental strand, 30788928 - 30788857
Alignment:
Q  107 tttgaccagtgcacatgcctctacgtacgagccggattagacatccatatttgatgggtcggaaaccggtgc 178  Q
    |||| ||||||| |||||||||| | |||||||||||||| |  |||  |||| ||||||||||||||||||    
T  30788928 tttggccagtgcgcatgcctctaggcacgagccggattagtcgcccacctttggtgggtcggaaaccggtgc 30788857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 112 - 178
Target Start/End: Original strand, 3601124 - 3601190
Alignment:
Q  112 ccagtgcacatgcctctacgtacgagccggattagacatccatatttgatgggtcggaaaccggtgc 178  Q
    ||||||| ||||||| |||  |||||||||||||| | ||||  |||| ||||||||||||||||||    
T  3601124 ccagtgcgcatgcctatacacacgagccggattagtcgtccacctttggtgggtcggaaaccggtgc 3601190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 111 - 181
Target Start/End: Original strand, 33940050 - 33940120
Alignment:
Q  111 accagtgcacatgcctctacgtacgagccggattagacatccatatttgatgggtcggaaaccggtgcaaa 181  Q
    |||| ||| |||||||||||  |||||||||||||| | ||||| ||||| |||||| ||||||| |||||    
T  33940050 accattgcgcatgcctctacacacgagccggattagtcgtccatctttgacgggtcgaaaaccggagcaaa 33940120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 107 - 173
Target Start/End: Complemental strand, 34954694 - 34954628
Alignment:
Q  107 tttgaccagtgcacatgcctctacgtacgagccggattagacatccatatttgatgggtcggaaacc 173  Q
    |||| ||||||||||| |||||||| | ||||| |||||| | ||||  ||||||||||||||||||    
T  34954694 tttggccagtgcacatacctctacgcatgagccagattagtcgtccacctttgatgggtcggaaacc 34954628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 20 - 89
Target Start/End: Complemental strand, 8612137 - 8612068
Alignment:
Q  20 aaccaagttgtttgggctccactagcaaggagctcctaacaaggatgtatccaagaaataccgggttcga 89  Q
    ||||||||||||||| ||||| | |||||||||||||  |||||| ||| ||  | ||||||||||||||    
T  8612137 aaccaagttgtttggactccagtggcaaggagctccttccaaggacgtacccggggaataccgggttcga 8612068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 20 - 89
Target Start/End: Complemental strand, 10311632 - 10311563
Alignment:
Q  20 aaccaagttgtttgggctccactagcaaggagctcctaacaaggatgtatccaagaaataccgggttcga 89  Q
    ||||| |||| |||||||||| |||||||||||||||  |||| | ||||||  | ||||||||||||||    
T  10311632 aaccatgttgcttgggctccagtagcaaggagctccttccaagaacgtatccggggaataccgggttcga 10311563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 19 - 56
Target Start/End: Complemental strand, 19230721 - 19230684
Alignment:
Q  19 caaccaagttgtttgggctccactagcaaggagctcct 56  Q
    |||||||||||||||||||||| | |||||||||||||    
T  19230721 caaccaagttgtttgggctccagtggcaaggagctcct 19230684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 108 - 177
Target Start/End: Complemental strand, 32157241 - 32157172
Alignment:
Q  108 ttgaccagtgcacatgcctctacgtacgagccggattagacatccatatttgatgggtcggaaaccggtg 177  Q
    ||||||||||| ||| |||||||| | ||||| |||||| ||||||| |||| ||| || ||||||||||    
T  32157241 ttgaccagtgcgcatacctctacgcatgagccagattagtcatccatctttggtggatcagaaaccggtg 32157172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 112 - 148
Target Start/End: Complemental strand, 9366493 - 9366457
Alignment:
Q  112 ccagtgcacatgcctctacgtacgagccggattagac 148  Q
    ||||||| |||||||||||| ||||||||||||||||    
T  9366493 ccagtgcgcatgcctctacgcacgagccggattagac 9366457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 112 - 172
Target Start/End: Complemental strand, 29444835 - 29444775
Alignment:
Q  112 ccagtgcacatgcctctacgtacgagccggattagacatccatatttgatgggtcggaaac 172  Q
    ||||||| |||||||||||| | ||||||||||||   ||||| |||| ||||||||||||    
T  29444835 ccagtgcgcatgcctctacgcatgagccggattagttgtccatctttggtgggtcggaaac 29444775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 44; Significance: 8e-16; HSPs: 2)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 107 - 178
Target Start/End: Original strand, 224351 - 224422
Alignment:
Q  107 tttgaccagtgcacatgcctctacgtacgagccggattagacatccatatttgatgggtcggaaaccggtgc 178  Q
    ||||| |||||||||| |||||||| |||||||||||||| | ||||| |||| ||||||||||||||||||    
T  224351 tttgatcagtgcacatacctctacgcacgagccggattagtcgtccatctttggtgggtcggaaaccggtgc 224422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 113 - 177
Target Start/End: Original strand, 186557 - 186621
Alignment:
Q  113 cagtgcacatgcctctacgtacgagccggattagacatccatatttgatgggtcggaaaccggtg 177  Q
    ||||||||||||||||||| |||||||||||||| | | ||| |||  |||||||||||||||||    
T  186557 cagtgcacatgcctctacgcacgagccggattagtcgttcatctttagtgggtcggaaaccggtg 186621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0170 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 1)
Name: scaffold0170
Description:

Target: scaffold0170; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 20 - 173
Target Start/End: Original strand, 9791 - 9945
Alignment:
Q  20 aaccaagttgtttgggctccactagcaaggagctcctaacaaggatgtatccaagaaataccgggttcgacttccagggaaaa-aatatttgaccagtgc 118  Q
    ||||||||||||| | ||||| |  ||||||||||||  ||||||||||||  || |||||||| ||||| ||||||||  || ||   ||| |||||||    
T  9791 aaccaagttgttttgactccagtgacaaggagctccttccaaggatgtatctgaggaataccggattcgatttccagggggaacaacgcttggccagtgc 9890  T
Q  119 acatgcctctacgtacgagccggattagacatccatatttgatgggtcggaaacc 173  Q
     |||||||||||| |||||||||||||| | ||||  |||| |||||| ||||||    
T  9891 gcatgcctctacgcacgagccggattagtcgtccacctttggtgggtcagaaacc 9945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 18 - 176
Target Start/End: Original strand, 40988 - 41147
Alignment:
Q  18 acaaccaagttgtttgggctccactagcaaggagctcctaacaaggatgtatccaagaaataccgggttcgact-tccagggaaaaaatatttgaccagt 116  Q
    ||||||||||||||||||||||| | |||||||||||||  || ||| |||  || | |||| ||||||||| | || |||| || || | |||  ||||    
T  40988 acaaccaagttgtttgggctccagtggcaaggagctccttccatggacgtactcagggaatatcgggttcgattctcaaggggaacaacacttggtcagt 41087  T
Q  117 gcacatgcctctacgtacgagccggattagacatccatatttgatgggtcggaaaccggt 176  Q
    |  |||||||||||| |||||||||||||| |  |||| |||| || |||||||||||||    
T  41088 gtgcatgcctctacgcacgagccggattagtcgcccatctttggtgagtcggaaaccggt 41147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0332 (Bit Score: 38; Significance: 0.000000000003; HSPs: 1)
Name: scaffold0332
Description:

Target: scaffold0332; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 23 - 104
Target Start/End: Original strand, 15280 - 15361
Alignment:
Q  23 caagttgtttgggctccactagcaaggagctcctaacaaggatgtatccaagaaataccgggttcgacttccagggaaaaaa 104  Q
    |||||||||||||||| | | ||||||||||||| ||||||| ||| ||  | |||||||||||||| |||||||| |||||    
T  15280 caagttgtttgggctctagtggcaaggagctccttacaaggaagtacccggggaataccgggttcgatttccaggggaaaaa 15361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 38; Significance: 0.000000000003; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 26 - 182
Target Start/End: Complemental strand, 95136 - 94980
Alignment:
Q  26 gttgtttgggctccactagcaaggagctcctaacaaggatgtatccaagaaataccgggttcgacttccagggaaaaaatatttgaccagtgcacatgcc 125  Q
    |||| |||||||||| | |||||||||||||  |||| | ||||||  | |||||| ||||||| ||| ||| ||| ||  |||||||||||| ||||||    
T  95136 gttgcttgggctccaatggcaaggagctccttccaagaaagtatccggggaataccaggttcgatttctagg-aaacaacgtttgaccagtgcgcatgcc 95038  T
Q  126 tctacgtacgagccggattagacatcca-tatttgatgggtcggaaaccggtgcaaaa 182  Q
    | |||| | |||||||||||| |  |||  ||||| ||||||||||| ||||||||||    
T  95037 tttacgcatgagccggattagtcgcccaccatttggtgggtcggaaatcggtgcaaaa 94980  T

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Target: scaffold0209 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0209
Description:

Target: scaffold0209; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 20 - 146
Target Start/End: Original strand, 12521 - 12646
Alignment:
Q  20 aaccaagttgtttgggctccactagcaaggagctcctaacaaggatgtatccaagaaataccgggttcgacttccagggaaaaaatatttgaccagtgca 119  Q
    ||||||||||||||||||| | | |||||||||| ||  |||||| |||  | ||||||||||||||||| ||||  || || ||   |||||||||||     
T  12521 aaccaagttgtttgggctctagtggcaaggagctacttccaaggacgtactcgagaaataccgggttcga-ttcctagggaacaacgcttgaccagtgcg 12619  T
Q  120 catgcctctacgtacgagccggattag 146  Q
    |||||||||||| | ||| ||||||||    
T  12620 catgcctctacgcatgagtcggattag 12646  T

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Target: scaffold0016 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 18 - 70
Target Start/End: Complemental strand, 8875 - 8823
Alignment:
Q  18 acaaccaagttgtttgggctccactagcaaggagctcctaacaaggatgtatc 70  Q
    ||||||||||||||||||||||| | |||||||||||||  |||||| |||||    
T  8875 acaaccaagttgtttgggctccagtggcaaggagctccttccaaggacgtatc 8823  T

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Target: scaffold0005 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 107 - 182
Target Start/End: Original strand, 219403 - 219478
Alignment:
Q  107 tttgaccagtgcacatgcctctacgtacgagccggattagacatccatatttgatgggtcggaaaccggtgcaaaa 182  Q
    |||| ||||||| |||||||||||| |||| | ||||||| | ||||  |||||||| ||| ||||||||||||||    
T  219403 tttggccagtgcgcatgcctctacgcacgaactggattagtcgtccacctttgatggatcgaaaaccggtgcaaaa 219478  T

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Target: scaffold0116 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0116
Description:

Target: scaffold0116; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 96 - 174
Target Start/End: Original strand, 17413 - 17491
Alignment:
Q  96 gggaaaaaatatttgaccagtgcacatgcctctacgtacgagccggattagacatccatatttgatgggtcggaaaccg 174  Q
    ||||||||||  ||||||||||| ||||| |||||  |||||||||||||| |  |||   ||||||||||||||||||    
T  17413 gggaaaaaatgcttgaccagtgcgcatgcttctacacacgagccggattagtcgcccaccattgatgggtcggaaaccg 17491  T

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Target: scaffold0086 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0086
Description:

Target: scaffold0086; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 120 - 178
Target Start/End: Original strand, 26230 - 26288
Alignment:
Q  120 catgcctctacgtacgagccggattagacatccatatttgatgggtcggaaaccggtgc 178  Q
    |||||||||||| |||||||||||||| | |||| | |||||| |||||||||| ||||    
T  26230 catgcctctacgcacgagccggattagtcgtccacaattgatgagtcggaaaccagtgc 26288  T

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Target: scaffold0006 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 20 - 98
Target Start/End: Original strand, 68463 - 68541
Alignment:
Q  20 aaccaagttgtttgggctccactagcaaggagctcctaacaaggatgtatccaagaaataccgggttcgacttccaggg 98  Q
    ||||||||||||||||||| | | |||||||||||||  |||||| ||| ||  |||||| ||||||||| | ||||||    
T  68463 aaccaagttgtttgggctctagtggcaaggagctccttccaaggacgtacccgggaaatatcgggttcgattcccaggg 68541  T

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Target: scaffold0010 (Bit Score: 29; Significance: 0.0000007; HSPs: 2)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 20 - 56
Target Start/End: Complemental strand, 25947 - 25911
Alignment:
Q  20 aaccaagttgtttgggctccactagcaaggagctcct 56  Q
    ||||||||||||||||||||| |||||| ||||||||    
T  25947 aaccaagttgtttgggctccagtagcaaagagctcct 25911  T

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Target: scaffold0010; HSP #2
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 114 - 178
Target Start/End: Complemental strand, 155779 - 155715
Alignment:
Q  114 agtgcacatgcctctacgtacgagccggattagacatccatatttgatgggtcggaaaccggtgc 178  Q
    ||||| |||||||||||| |||||||||||||| |  |||  |||| |||||||||| |||||||    
T  155779 agtgcgcatgcctctacgcacgagccggattagtcgcccacctttggtgggtcggaagccggtgc 155715  T

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