View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF15982_low_61 (Length: 236)

Name: NF15982_low_61
Description: NF15982
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF15982_low_61
NF15982_low_61
[»] chr6 (12 HSPs)
chr6 (84-177)||(1831209-1831304)
chr6 (71-172)||(15603721-15603824)
chr6 (82-171)||(11680417-11680508)
chr6 (111-177)||(1131873-1131939)
chr6 (118-179)||(13758522-13758583)
chr6 (136-179)||(15060267-15060310)
chr6 (111-177)||(22012054-22012121)
chr6 (136-171)||(26817743-26817778)
chr6 (135-177)||(1423078-1423120)
chr6 (111-177)||(18675452-18675518)
chr6 (111-177)||(34043643-34043710)
chr6 (111-177)||(20990538-20990604)
[»] chr2 (9 HSPs)
chr2 (60-177)||(31548801-31548920)
chr2 (82-177)||(25621891-25621987)
chr2 (136-179)||(6883759-6883802)
chr2 (136-177)||(7444046-7444087)
chr2 (111-177)||(44322160-44322227)
chr2 (111-177)||(6221485-6221552)
chr2 (111-177)||(33015131-33015198)
chr2 (111-177)||(44313981-44314048)
chr2 (111-177)||(2554155-2554221)
[»] chr4 (9 HSPs)
chr4 (82-179)||(10142585-10142684)
chr4 (86-175)||(13957694-13957785)
chr4 (111-179)||(52460640-52460708)
chr4 (122-179)||(25201776-25201833)
chr4 (136-179)||(3665085-3665128)
chr4 (139-175)||(24611029-24611065)
chr4 (111-177)||(10094960-10095027)
chr4 (82-173)||(42511284-42511377)
chr4 (136-177)||(31915592-31915633)
[»] chr8 (8 HSPs)
chr8 (60-178)||(23231934-23232054)
chr8 (86-179)||(9381777-9381872)
chr8 (82-179)||(11648049-11648148)
chr8 (111-177)||(1981695-1981762)
chr8 (111-177)||(16729829-16729895)
chr8 (82-179)||(602067-602166)
chr8 (136-177)||(7263571-7263612)
chr8 (177-213)||(23231934-23231970)
[»] chr7 (10 HSPs)
chr7 (82-179)||(8113441-8113540)
chr7 (82-169)||(43178549-43178638)
chr7 (136-177)||(20394724-20394765)
chr7 (82-175)||(24441602-24441697)
chr7 (111-177)||(8389237-8389304)
chr7 (136-178)||(9420803-9420845)
chr7 (111-173)||(21863958-21864020)
chr7 (136-179)||(3123703-3123746)
chr7 (111-177)||(13754214-13754280)
chr7 (136-177)||(35477916-35477957)
[»] chr3 (7 HSPs)
chr3 (82-179)||(44879887-44879986)
chr3 (83-179)||(47185419-47185517)
chr3 (111-179)||(33100367-33100435)
chr3 (119-177)||(15760966-15761025)
chr3 (111-177)||(19157192-19157259)
chr3 (111-177)||(27941454-27941521)
chr3 (111-177)||(52448242-52448308)
[»] chr1 (12 HSPs)
chr1 (82-179)||(12028198-12028297)
chr1 (111-179)||(9023523-9023591)
chr1 (136-177)||(44310772-44310813)
chr1 (135-179)||(42055752-42055796)
chr1 (82-177)||(48646364-48646465)
chr1 (144-177)||(23664046-23664079)
chr1 (137-177)||(5208382-5208422)
chr1 (111-177)||(21906478-21906545)
chr1 (111-177)||(34307384-34307451)
chr1 (111-177)||(48596290-48596357)
chr1 (177-214)||(42055752-42055789)
chr1 (144-176)||(25095299-25095331)
[»] chr5 (16 HSPs)
chr5 (111-179)||(13820548-13820616)
chr5 (84-179)||(43170958-43171055)
chr5 (136-175)||(29789921-29789960)
chr5 (136-179)||(37135209-37135252)
chr5 (111-177)||(5578547-5578613)
chr5 (60-175)||(8805959-8806076)
chr5 (135-177)||(26402397-26402439)
chr5 (136-177)||(5120439-5120480)
chr5 (136-177)||(39537338-39537379)
chr5 (111-175)||(29150696-29150760)
chr5 (136-179)||(16686673-16686716)
chr5 (111-177)||(23962949-23963016)
chr5 (111-177)||(13490489-13490555)
chr5 (177-214)||(13820548-13820585)
chr5 (135-179)||(13825893-13825937)
chr5 (141-177)||(20891066-20891102)
[»] scaffold1266 (1 HSPs)
scaffold1266 (111-179)||(1672-1740)
[»] scaffold0385 (1 HSPs)
scaffold0385 (82-179)||(1036-1135)
[»] scaffold0263 (1 HSPs)
scaffold0263 (111-179)||(18278-18346)
[»] scaffold0116 (1 HSPs)
scaffold0116 (148-179)||(41108-41139)
[»] scaffold1364 (1 HSPs)
scaffold1364 (135-179)||(1230-1274)


Alignment Details
Target: chr6 (Bit Score: 57; Significance: 6e-24; HSPs: 12)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 84 - 177
Target Start/End: Original strand, 1831209 - 1831304
Alignment:
Q  84 ttttttggtgttattattcttaggtgt--aaattgcagtctacttcacagatattattgttctctacttctacgatattttattttgttttggtgt 177  Q
    ||||||||||||||||||||||| ||   ||||| ||||||||||| ||||| |||||||||||||||||| || |||||||||||||||||||||    
T  1831209 ttttttggtgttattattcttagatgctaaaatttcagtctacttcgcagatgttattgttctctacttctgcggtattttattttgttttggtgt 1831304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 71 - 172
Target Start/End: Complemental strand, 15603824 - 15603721
Alignment:
Q  71 tagtaatgtaaacttttttggtgttattattcttaggtg--taaattgcagtctacttcacagatattattgttctctacttctacgatattttattttg 168  Q
    |||||||||||| ||||||||||||||||||||||||||   ||||| || | |||||  ||| |  |||||||||||||||||| ||||||||||||||    
T  15603824 tagtaatgtaaagttttttggtgttattattcttaggtgctaaaatttcaatttactttgcaggtgctattgttctctacttctatgatattttattttg 15603725  T
Q  169 tttt 172  Q
    ||||    
T  15603724 tttt 15603721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 82 - 171
Target Start/End: Complemental strand, 11680508 - 11680417
Alignment:
Q  82 acttttttggtgttattattcttaggtgtaaat--tgcagtctacttcacagatattattgttctctacttctacgatattttattttgttt 171  Q
    ||||||||||||||||||||||||||||| |||  | |||| |||||| ||  |  ||||||||| ||||||||||||||||||||||||||    
T  11680508 acttttttggtgttattattcttaggtgttaatatttcagtatacttcgcatgtgctattgttctatacttctacgatattttattttgttt 11680417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 111 - 177
Target Start/End: Original strand, 1131873 - 1131939
Alignment:
Q  111 aaattgcagtctacttcacagatattattgttctctacttctacgatattttattttgttttggtgt 177  Q
    ||||| || |||||||||||  || |||| |||||||||||||||||||||||||||||||||||||    
T  1131873 aaatttcaatctacttcacatgtactatttttctctacttctacgatattttattttgttttggtgt 1131939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 118 - 179
Target Start/End: Complemental strand, 13758583 - 13758522
Alignment:
Q  118 agtctacttcacagatattattgttctctacttctacgatattttattttgttttggtgtct 179  Q
    |||||||||||||  |  |||||||||||||||||||| ||||||||| |||||||||||||    
T  13758583 agtctacttcacatgtgctattgttctctacttctacggtattttattctgttttggtgtct 13758522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 136 - 179
Target Start/End: Original strand, 15060267 - 15060310
Alignment:
Q  136 tattgttctctacttctacgatattttattttgttttggtgtct 179  Q
    |||||||||||||||||| | |||||||||||||||||||||||    
T  15060267 tattgttctctacttctatggtattttattttgttttggtgtct 15060310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 111 - 177
Target Start/End: Complemental strand, 22012121 - 22012054
Alignment:
Q  111 aaattgcagtctacttcacagatattattgttctctacttctacgata-ttttattttgttttggtgt 177  Q
    ||||| |||||||||||||| ||  |||| ||||||||||||||| || |||||||||||||||||||    
T  22012121 aaatttcagtctacttcacatatgctatttttctctacttctacggtatttttattttgttttggtgt 22012054  T

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Target: chr6; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 136 - 171
Target Start/End: Original strand, 26817743 - 26817778
Alignment:
Q  136 tattgttctctacttctacgatattttattttgttt 171  Q
    ||||||||||||||||||||||||||||||||||||    
T  26817743 tattgttctctacttctacgatattttattttgttt 26817778  T

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Target: chr6; HSP #9
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 135 - 177
Target Start/End: Original strand, 1423078 - 1423120
Alignment:
Q  135 ttattgttctctacttctacgatattttattttgttttggtgt 177  Q
    ||||| ||||||||| |||||||||||||||||||||||||||    
T  1423078 ttatttttctctactcctacgatattttattttgttttggtgt 1423120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 111 - 177
Target Start/End: Original strand, 18675452 - 18675518
Alignment:
Q  111 aaattgcagtctacttcacagatattattgttctctacttctacgatattttattttgttttggtgt 177  Q
    ||||| ||||||||||| ||  | ||||| ||||||||| || ||||||||||||||||||||||||    
T  18675452 aaatttcagtctacttcgcatgtgttatttttctctactcctgcgatattttattttgttttggtgt 18675518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 111 - 177
Target Start/End: Original strand, 34043643 - 34043710
Alignment:
Q  111 aaattgcagtctacttcacagatattattgttctctacttctacgata-ttttattttgttttggtgt 177  Q
    ||||| ||||||||||||||  |  |||| ||||||||||||||| || |||||||||||||||||||    
T  34043643 aaatttcagtctacttcacatgtgctatttttctctacttctacggtatttttattttgttttggtgt 34043710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 111 - 177
Target Start/End: Original strand, 20990538 - 20990604
Alignment:
Q  111 aaattgcagtctacttcacagatattattgttctctacttctacgatattttattttgttttggtgt 177  Q
    ||||| ||||||||||| ||  |  |||| |||||||||| |||||||||| |||||||||||||||    
T  20990538 aaatttcagtctacttcgcatgtgctatttttctctacttgtacgatatttcattttgttttggtgt 20990604  T

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Target: chr2 (Bit Score: 57; Significance: 6e-24; HSPs: 9)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 60 - 177
Target Start/End: Complemental strand, 31548920 - 31548801
Alignment:
Q  60 tgagacgcgtttagtaatgtaaacttttttggtgttattattcttaggtgt--aaattgcagtctacttcacagatattattgttctctacttctacgat 157  Q
    |||||||  ||||||||||| ||||||||| |||||||||||||| ||||   ||||| ||||||||||| ||  |  |||||||||||||||||| |||    
T  31548920 tgagacgaatttagtaatgtcaactttttttgtgttattattctttggtggtaaaatttcagtctacttcgcaagtgctattgttctctacttctatgat 31548821  T
Q  158 attttattttgttttggtgt 177  Q
    ||||||||||||||||||||    
T  31548820 attttattttgttttggtgt 31548801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 82 - 177
Target Start/End: Original strand, 25621891 - 25621987
Alignment:
Q  82 acttttttggtgttattattcttaggt--gtaaattgcagtctacttcacagatattattgttctctacttctacgatattttattttgttttggtgt 177  Q
    ||||| |||||||||||||||||| ||    ||||| ||||||||||||||   ||||||||||| ||||| ||||||||||||||||||||||||||    
T  25621891 actttgttggtgttattattcttaagttctaaaatttcagtctacttcaca-tgattattgttctatacttttacgatattttattttgttttggtgt 25621987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 136 - 179
Target Start/End: Original strand, 6883759 - 6883802
Alignment:
Q  136 tattgttctctacttctacgatattttattttgttttggtgtct 179  Q
    |||||||||||||||||||||||| |||||||||||||||||||    
T  6883759 tattgttctctacttctacgatatcttattttgttttggtgtct 6883802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 136 - 177
Target Start/End: Original strand, 7444046 - 7444087
Alignment:
Q  136 tattgttctctacttctacgatattttattttgttttggtgt 177  Q
    |||| |||||||||||||||||||||||||||||||||||||    
T  7444046 tatttttctctacttctacgatattttattttgttttggtgt 7444087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 111 - 177
Target Start/End: Complemental strand, 44322227 - 44322160
Alignment:
Q  111 aaattgcagtctacttcacagatattattgttctctacttctacgata-ttttattttgttttggtgt 177  Q
    ||||| |||||||||||||| ||  |||| ||||||||||||||| || |||||||||||||||||||    
T  44322227 aaatttcagtctacttcacatatgctatttttctctacttctacggtatttttattttgttttggtgt 44322160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 111 - 177
Target Start/End: Original strand, 6221485 - 6221552
Alignment:
Q  111 aaattgcagtctacttcacagatattattgttctctacttctacgata-ttttattttgttttggtgt 177  Q
    ||||| ||||||||||||||  |  |||| ||||||||||||||| || |||||||||||||||||||    
T  6221485 aaatttcagtctacttcacatgtgctatttttctctacttctacggtatttttattttgttttggtgt 6221552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 111 - 177
Target Start/End: Complemental strand, 33015198 - 33015131
Alignment:
Q  111 aaattgcagtctacttcacagatattattgttctctacttctacgata-ttttattttgttttggtgt 177  Q
    ||||| ||||||||||||||  |  |||| ||||||||||||||| || |||||||||||||||||||    
T  33015198 aaatttcagtctacttcacatgtgctatttttctctacttctacggtatttttattttgttttggtgt 33015131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 111 - 177
Target Start/End: Complemental strand, 44314048 - 44313981
Alignment:
Q  111 aaattgcagtctacttcacagatattattgttctctacttctacgata-ttttattttgttttggtgt 177  Q
    ||||| ||||||||||||||  |  |||| ||||||||||||||| || |||||||||||||||||||    
T  44314048 aaatttcagtctacttcacatttgctatttttctctacttctacggtatttttattttgttttggtgt 44313981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 111 - 177
Target Start/End: Original strand, 2554155 - 2554221
Alignment:
Q  111 aaattgcagtctacttcacagatattattgttctctacttctacgatattttattttgttttggtgt 177  Q
    ||||| ||||||||||||||  |  |||| |||||||||| || ||||||| |||||||||||||||    
T  2554155 aaatttcagtctacttcacatgtgctatttttctctacttgtaggatatttcattttgttttggtgt 2554221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 53; Significance: 1e-21; HSPs: 9)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 82 - 179
Target Start/End: Original strand, 10142585 - 10142684
Alignment:
Q  82 acttttttggtgttattattcttaggtgt--aaattgcagtctacttcacagatattattgttctctacttctacgatattttattttgttttggtgtct 179  Q
    |||||||||||||||||||||| |||||   ||||| ||||||||||||||  |  ||||||||| ||||||||||| ||||||||||||||||||||||    
T  10142585 acttttttggtgttattattctcaggtgctaaaatttcagtctacttcacatgtgctattgttctatacttctacgacattttattttgttttggtgtct 10142684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 86 - 175
Target Start/End: Original strand, 13957694 - 13957785
Alignment:
Q  86 ttttggtgttattattcttaggtgt--aaattgcagtctacttcacagatattattgttctctacttctacgatattttattttgttttggt 175  Q
    ||||||| ||||||||||||||||   ||||| ||||||||||  ||  |  ||||||||| ||||||||||||||||||||||||||||||    
T  13957694 ttttggtattattattcttaggtgctcaaatttcagtctactttgcacgtgctattgttctatacttctacgatattttattttgttttggt 13957785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 111 - 179
Target Start/End: Original strand, 52460640 - 52460708
Alignment:
Q  111 aaattgcagtctacttcacagatattattgttctctacttctacgatattttattttgttttggtgtct 179  Q
    ||||| ||||||||||| ||  | ||||||||||||||||||||| ||||||||||||||| |||||||    
T  52460640 aaatttcagtctacttcgcatgtgttattgttctctacttctacggtattttattttgtttcggtgtct 52460708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 122 - 179
Target Start/End: Original strand, 25201776 - 25201833
Alignment:
Q  122 tacttcacagatattattgttctctacttctacgatattttattttgttttggtgtct 179  Q
    ||||||| || ||||||||||||||||||||||| |||||||| |||| |||||||||    
T  25201776 tacttcaaaggtattattgttctctacttctacggtattttatcttgtgttggtgtct 25201833  T

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Target: chr4; HSP #5
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 136 - 179
Target Start/End: Complemental strand, 3665128 - 3665085
Alignment:
Q  136 tattgttctctacttctacgatattttattttgttttggtgtct 179  Q
    |||||||||||||||||| | |||||||||||||||||||||||    
T  3665128 tattgttctctacttctatggtattttattttgttttggtgtct 3665085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 139 - 175
Target Start/End: Complemental strand, 24611065 - 24611029
Alignment:
Q  139 tgttctctacttctacgatattttattttgttttggt 175  Q
    ||||||||||||||||| |||||||||||||||||||    
T  24611065 tgttctctacttctacggtattttattttgttttggt 24611029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 111 - 177
Target Start/End: Complemental strand, 10095027 - 10094960
Alignment:
Q  111 aaattgcagtctacttcacagatattattgttctctacttctacgata-ttttattttgttttggtgt 177  Q
    ||||| ||||||||||||||  |  |||| ||||||||||||||| || |||||||||||||||||||    
T  10095027 aaatttcagtctacttcacatgtgctatttttctctacttctacggtatttttattttgttttggtgt 10094960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 82 - 173
Target Start/End: Complemental strand, 42511377 - 42511284
Alignment:
Q  82 acttttttggtgttattattcttaggtgt--aaattgcagtctacttcacagatattattgttctctacttctacgatattttattttgttttg 173  Q
    ||||||||||||||| |||| |||||||   ||||| ||||||||||  |   |  ||||||||| |||||||||||||||||||| |||||||    
T  42511377 acttttttggtgttaatatttttaggtgctaaaatttcagtctactttgcgtgtgctattgttctatacttctacgatattttattatgttttg 42511284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 136 - 177
Target Start/End: Original strand, 31915592 - 31915633
Alignment:
Q  136 tattgttctctacttctacgatattttattttgttttggtgt 177  Q
    ||||||| |||||||||| | |||||||||||||||||||||    
T  31915592 tattgttgtctacttctatggtattttattttgttttggtgt 31915633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 50; Significance: 9e-20; HSPs: 8)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 60 - 178
Target Start/End: Complemental strand, 23232054 - 23231934
Alignment:
Q  60 tgagacgcgtttagtaatgtaaacttttttggtgttattattcttaggtgt--aaattgcagtctacttcacagatattattgttctctacttctacgat 157  Q
    |||||| | ||||||||||| ||| ||||| ||||||||||||||||||    ||||| |||| ||||||  || | ||||||||||||||||||||| |    
T  23232054 tgagacacatttagtaatgtcaaccttttttgtgttattattcttaggtactaaaatttcagtatacttcgtaggtgttattgttctctacttctacggt 23231955  T
Q  158 attttattttgttttggtgtc 178  Q
    |||||||||| ||||||||||    
T  23231954 attttattttattttggtgtc 23231934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 86 - 179
Target Start/End: Complemental strand, 9381872 - 9381777
Alignment:
Q  86 ttttggtgttattattcttaggtgt--aaattgcagtctacttcacagatattattgttctctacttctacgatattttattttgttttggtgtct 179  Q
    |||| |||||||||||||||||||   ||||| ||||||||||| ||  |  ||||||||| ||||||||||||| ||||||||||||||||||||    
T  9381872 tttttgtgttattattcttaggtgctaaaatttcagtctacttcgcatgtgctattgttctatacttctacgatactttattttgttttggtgtct 9381777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 82 - 179
Target Start/End: Complemental strand, 11648148 - 11648049
Alignment:
Q  82 acttttttggtgttattattcttaggtg--taaattgcagtctacttcacagatattattgttctctacttctacgatattttattttgttttggtgtct 179  Q
    ||||||||||||||||||||||||||||   ||||| ||||||||||| ||  | ||||||||| |||||| ||   |||||||||||||||| ||||||    
T  11648148 acttttttggtgttattattcttaggtgctaaaatttcagtctacttcgcatgtgttattgttcactacttttatagtattttattttgtttttgtgtct 11648049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 111 - 177
Target Start/End: Original strand, 1981695 - 1981762
Alignment:
Q  111 aaattgcagtctacttcacagatattattgttctctacttctacgata-ttttattttgttttggtgt 177  Q
    ||||| |||||||||||||| ||  |||| |||||||||||||||||| |||||||||||||||||||    
T  1981695 aaatttcagtctacttcacatatgctatttttctctacttctacgatatttttattttgttttggtgt 1981762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 111 - 177
Target Start/End: Original strand, 16729829 - 16729895
Alignment:
Q  111 aaattgcagtctacttcacagatattattgttctctacttctacgatattttattttgttttggtgt 177  Q
    ||||| ||||||||||| ||  |  |||| |||||||||||||||||||||||||||||||||||||    
T  16729829 aaatttcagtctacttcgcatgtgctatttttctctacttctacgatattttattttgttttggtgt 16729895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 82 - 179
Target Start/End: Complemental strand, 602166 - 602067
Alignment:
Q  82 acttttttggtgttattattcttaggtgt--aaattgcagtctacttcacagatattattgttctctacttctacgatattttattttgttttggtgtct 179  Q
    ||||||||||||||||||||||||| ||   |||||  ||  |||||   ||||  |||||||||||||||| || |||||||||||||||||| |||||    
T  602166 acttttttggtgttattattcttagttgctaaaatttaagcttactttgtagatgctattgttctctacttcaacaatattttattttgttttgttgtct 602067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 136 - 177
Target Start/End: Complemental strand, 7263612 - 7263571
Alignment:
Q  136 tattgttctctacttctacgatattttattttgttttggtgt 177  Q
    |||| |||||||||| |||||||||| |||||||||||||||    
T  7263612 tatttttctctacttgtacgatatttcattttgttttggtgt 7263571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 177 - 213
Target Start/End: Complemental strand, 23231970 - 23231934
Alignment:
Q  177 tctcaacttctacggtattttattttcttttggtgtc 213  Q
    |||| ||||||||||||||||||||| ||||||||||    
T  23231970 tctctacttctacggtattttattttattttggtgtc 23231934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 49; Significance: 4e-19; HSPs: 10)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 82 - 179
Target Start/End: Complemental strand, 8113540 - 8113441
Alignment:
Q  82 acttttttggtgttattattcttaggtgt--aaattgcagtctacttcacagatattattgttctctacttctacgatattttattttgttttggtgtct 179  Q
    |||||||| |||||||||||||||||||   ||||| |||| |||||| ||  | |||||||||| ||||||||| ||||||||||||||||||||||||    
T  8113540 actttttttgtgttattattcttaggtgctaaaatttcagtgtacttcgcatgtgttattgttctatacttctacaatattttattttgttttggtgtct 8113441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 82 - 169
Target Start/End: Complemental strand, 43178638 - 43178549
Alignment:
Q  82 acttttttggtgttattattcttaggtgt--aaattgcagtctacttcacagatattattgttctctacttctacgatattttattttgt 169  Q
    ||||||||||||||||| |||||||||||  |||||| ||| ||||||| || |  ||||||||| |||| |||||||||||||||||||    
T  43178638 acttttttggtgttattgttcttaggtgttaaaattgtagtttacttcataggtgctattgttctttactcctacgatattttattttgt 43178549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 136 - 177
Target Start/End: Complemental strand, 20394765 - 20394724
Alignment:
Q  136 tattgttctctacttctacgatattttattttgttttggtgt 177  Q
    |||| |||||||||||||||||||||||||||||||||||||    
T  20394765 tatttttctctacttctacgatattttattttgttttggtgt 20394724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 82 - 175
Target Start/End: Complemental strand, 24441697 - 24441602
Alignment:
Q  82 acttttttggtgttattattcttaggtgt--aaattgcagtctacttcacagatattattgttctctacttctacgatattttattttgttttggt 175  Q
    ||||||||| |||||||||||||||||||  | ||| |||||||||| |||  |  ||||||||| |||||||| ||||||||||| | |||||||    
T  24441697 acttttttgctgttattattcttaggtgttaatatttcagtctactttacatgtgctattgttctatacttctatgatattttattctattttggt 24441602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 111 - 177
Target Start/End: Complemental strand, 8389304 - 8389237
Alignment:
Q  111 aaattgcagtctacttcacagatattattgttctctacttctacgata-ttttattttgttttggtgt 177  Q
    ||||| ||||||||||||||  | ||||| ||||||||||||||| || |||||||||||||||||||    
T  8389304 aaatttcagtctacttcacatgtgttatttttctctacttctacggtatttttattttgttttggtgt 8389237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 136 - 178
Target Start/End: Original strand, 9420803 - 9420845
Alignment:
Q  136 tattgttctctacttctacgatattttattttgttttggtgtc 178  Q
    |||||||||||||||||||||||||||||| ||| ||||||||    
T  9420803 tattgttctctacttctacgatattttattatgtgttggtgtc 9420845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 111 - 173
Target Start/End: Original strand, 21863958 - 21864020
Alignment:
Q  111 aaattgcagtctacttcacagatattattgttctctacttctacgatattttattttgttttg 173  Q
    ||||| || |||||||| ||| |  |||||||||||||||||||| |||||||||||||||||    
T  21863958 aaatttcactctacttcgcaggtgctattgttctctacttctacggtattttattttgttttg 21864020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 136 - 179
Target Start/End: Complemental strand, 3123746 - 3123703
Alignment:
Q  136 tattgttctctacttctacgatattttattttgttttggtgtct 179  Q
    ||||||| |||| ||||||| |||||||||||||||||||||||    
T  3123746 tattgttatctatttctacggtattttattttgttttggtgtct 3123703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 111 - 177
Target Start/End: Original strand, 13754214 - 13754280
Alignment:
Q  111 aaattgcagtctacttcacagatattattgttctctacttctacgatattttattttgttttggtgt 177  Q
    ||||| ||||||||||| ||  |  |||| |||||||||| |||||||||| |||||||||||||||    
T  13754214 aaatttcagtctacttcgcatgtgctatttttctctacttgtacgatatttcattttgttttggtgt 13754280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 136 - 177
Target Start/End: Complemental strand, 35477957 - 35477916
Alignment:
Q  136 tattgttctctacttctacgatattttattttgttttggtgt 177  Q
    |||| |||||||||| |||||||||| |||||||||||||||    
T  35477957 tatttttctctacttgtacgatatttcattttgttttggtgt 35477916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 49; Significance: 4e-19; HSPs: 7)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 82 - 179
Target Start/End: Original strand, 44879887 - 44879986
Alignment:
Q  82 acttttttggtgttattattcttaggtgt--aaattgcagtctacttcacagatattattgttctctacttctacgatattttattttgttttggtgtct 179  Q
    |||| |||||||||||||||||||||||   |||||  |||||||||| ||  | |||||||||| ||||||||| ||||||||||||||||||||||||    
T  44879887 acttgtttggtgttattattcttaggtgctaaaattttagtctacttcgcatgtgttattgttctatacttctacaatattttattttgttttggtgtct 44879986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 83 - 179
Target Start/End: Original strand, 47185419 - 47185517
Alignment:
Q  83 cttttttggtgttattattcttaggtgt--aaattgcagtctacttcacagatattattgttctctacttctacgatattttattttgttttggtgtct 179  Q
    ||||| ||||||||||||||||||||||  ||||| ||||||||||||||  |  ||||||||| || |||||||||||||||| |||||||| |||||    
T  47185419 cttttctggtgttattattcttaggtgtcaaaatttcagtctacttcacatttgctattgttctatatttctacgatattttatgttgttttgatgtct 47185517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 111 - 179
Target Start/End: Complemental strand, 33100435 - 33100367
Alignment:
Q  111 aaattgcagtctacttcacagatattattgttctctacttctacgatattttattttgttttggtgtct 179  Q
    ||||| ||||||||||| ||  | ||||||||||||| ||||| |  ||||||||||||||||||||||    
T  33100435 aaatttcagtctacttcgcatgtgttattgttctctatttctaaggcattttattttgttttggtgtct 33100367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 119 - 177
Target Start/End: Original strand, 15760966 - 15761025
Alignment:
Q  119 gtctacttcacagatattattgttctctacttctacgata-ttttattttgttttggtgt 177  Q
    ||||||||||||  | ||||| ||||||||||||||| || |||||||||||||||||||    
T  15760966 gtctacttcacatgtgttatttttctctacttctacggtatttttattttgttttggtgt 15761025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 111 - 177
Target Start/End: Original strand, 19157192 - 19157259
Alignment:
Q  111 aaattgcagtctacttcacagatattattgttctctacttctacgata-ttttattttgttttggtgt 177  Q
    ||||| ||||||||||||||  |  |||| ||||||||||||||| || |||||||||||||||||||    
T  19157192 aaatttcagtctacttcacatgtgctatttttctctacttctacggtatttttattttgttttggtgt 19157259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 111 - 177
Target Start/End: Complemental strand, 27941521 - 27941454
Alignment:
Q  111 aaattgcagtctacttcacagatattattgttctctacttctacgata-ttttattttgttttggtgt 177  Q
    ||||| ||||||||||||||  |  |||| ||||||||||||||| || |||||||||||||||||||    
T  27941521 aaatttcagtctacttcacatgtgctatttttctctacttctacggtatttttattttgttttggtgt 27941454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 111 - 177
Target Start/End: Original strand, 52448242 - 52448308
Alignment:
Q  111 aaattgcagtctacttcacagatattattgttctctacttctacgatattttattttgttttggtgt 177  Q
    ||||| ||||||||||| ||  |  |||| |||||||||| |||||||||| |||||||||||||||    
T  52448242 aaatttcagtctacttcgcatgtgctatttttctctacttgtacgatatttcattttgttttggtgt 52448308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 49; Significance: 4e-19; HSPs: 12)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 82 - 179
Target Start/End: Original strand, 12028198 - 12028297
Alignment:
Q  82 acttttttggtgttattattcttaggtgt--aaattgcagtctacttcacagatattattgttctctacttctacgatattttattttgttttggtgtct 179  Q
    |||||||||||||||||||| |||||||   ||||| ||||||||||||||  | || ||||||| |||||||| |||||||||||||||||| ||||||    
T  12028198 acttttttggtgttattatttttaggtgctaaaatttcagtctacttcacatgtgttgttgttctatacttctaggatattttattttgtttttgtgtct 12028297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 111 - 179
Target Start/End: Original strand, 9023523 - 9023591
Alignment:
Q  111 aaattgcagtctacttcacagatattattgttctctacttctacgatattttattttgttttggtgtct 179  Q
    ||||| |||| |||||| ||  |||||||||||||||||| ||||||||||||||||||||||||||||    
T  9023523 aaatttcagtatacttcgcatgtattattgttctctacttttacgatattttattttgttttggtgtct 9023591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 136 - 177
Target Start/End: Original strand, 44310772 - 44310813
Alignment:
Q  136 tattgttctctacttctacgatattttattttgttttggtgt 177  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  44310772 tattgttctctacttctacgatattttattttgttttggtgt 44310813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 135 - 179
Target Start/End: Complemental strand, 42055796 - 42055752
Alignment:
Q  135 ttattgttctctacttctacgatattttattttgttttggtgtct 179  Q
    ||||||||||||||||||||| |||||||||||||||||||||||    
T  42055796 ttattgttctctacttctacggtattttattttgttttggtgtct 42055752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 82 - 177
Target Start/End: Original strand, 48646364 - 48646465
Alignment:
Q  82 acttttttggtgttattattcttaggtg-taaattgcagtctacttcacaga---tattat--tgttctctacttctacgatattttattttgttttggt 175  Q
    |||||||||||||||||||||||||||| |||| |  |||||| ||| || |   ||||||  |||||| |||||||||||||||||||||||| |||||    
T  48646364 acttttttggtgttattattcttaggtgctaaaatttagtctatttcgcataatctattatattgttctatacttctacgatattttattttgtgttggt 48646463  T
Q  176 gt 177  Q
    ||    
T  48646464 gt 48646465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 144 - 177
Target Start/End: Complemental strand, 23664079 - 23664046
Alignment:
Q  144 tctacttctacgatattttattttgttttggtgt 177  Q
    ||||||||||||||||||||||||||||||||||    
T  23664079 tctacttctacgatattttattttgttttggtgt 23664046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 137 - 177
Target Start/End: Complemental strand, 5208422 - 5208382
Alignment:
Q  137 attgttctctacttctacgatattttattttgttttggtgt 177  Q
    |||||||| |||||||||||||||||||||| |||||||||    
T  5208422 attgttctatacttctacgatattttattttattttggtgt 5208382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 111 - 177
Target Start/End: Original strand, 21906478 - 21906545
Alignment:
Q  111 aaattgcagtctacttcacagatattattgttctctacttctacgata-ttttattttgttttggtgt 177  Q
    ||||| ||||||||||||||  |  |||| ||||||||||||||| || |||||||||||||||||||    
T  21906478 aaatttcagtctacttcacatgtgctatttttctctacttctacggtatttttattttgttttggtgt 21906545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 111 - 177
Target Start/End: Complemental strand, 34307451 - 34307384
Alignment:
Q  111 aaattgcagtctacttcacagatattattgttctctacttctacgata-ttttattttgttttggtgt 177  Q
    ||||| || |||||||||||  |  |||| |||||||||||||||||| |||||||||||||||||||    
T  34307451 aaatttcattctacttcacatgtgctatttttctctacttctacgatatttttattttgttttggtgt 34307384  T

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Target: chr1; HSP #10
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 111 - 177
Target Start/End: Complemental strand, 48596357 - 48596290
Alignment:
Q  111 aaattgcagtctacttcacagatattattgttctctacttctacgata-ttttattttgttttggtgt 177  Q
    ||||| ||||||||||||||  |  |||| ||||||||||||||| || |||||||||||||||||||    
T  48596357 aaatttcagtctacttcacatgtgctatttttctctacttctacggtatttttattttgttttggtgt 48596290  T

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Target: chr1; HSP #11
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 177 - 214
Target Start/End: Complemental strand, 42055789 - 42055752
Alignment:
Q  177 tctcaacttctacggtattttattttcttttggtgtct 214  Q
    |||| ||||||||||||||||||||| |||||||||||    
T  42055789 tctctacttctacggtattttattttgttttggtgtct 42055752  T

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Target: chr1; HSP #12
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 144 - 176
Target Start/End: Original strand, 25095299 - 25095331
Alignment:
Q  144 tctacttctacgatattttattttgttttggtg 176  Q
    ||||||| |||||||||||||||||||||||||    
T  25095299 tctacttttacgatattttattttgttttggtg 25095331  T

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Target: chr5 (Bit Score: 45; Significance: 9e-17; HSPs: 16)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 111 - 179
Target Start/End: Complemental strand, 13820616 - 13820548
Alignment:
Q  111 aaattgcagtctacttcacagatattattgttctctacttctacgatattttattttgttttggtgtct 179  Q
    ||||| ||||||||||||||  | || |||||||||||||||||| |||||||||||||||||||||||    
T  13820616 aaatttcagtctacttcacatgtgttgttgttctctacttctacggtattttattttgttttggtgtct 13820548  T

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Target: chr5; HSP #2
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 84 - 179
Target Start/End: Complemental strand, 43171055 - 43170958
Alignment:
Q  84 ttttttggtgttattattcttaggtgt--aaattgcagtctacttcacagatattattgttctctacttctacgatattttattttgttttggtgtct 179  Q
    |||||| |||||||||||||||||||   ||||| ||||||||||| ||  |  ||||||||  | ||||||||||||||||||||||||||||||||    
T  43171055 ttttttcgtgttattattcttaggtgctaaaattacagtctacttcgcatgtgctattgttccatgcttctacgatattttattttgttttggtgtct 43170958  T

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Target: chr5; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 136 - 175
Target Start/End: Original strand, 29789921 - 29789960
Alignment:
Q  136 tattgttctctacttctacgatattttattttgttttggt 175  Q
    ||||||||| ||||||||||||||||||||||||||||||    
T  29789921 tattgttctatacttctacgatattttattttgttttggt 29789960  T

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Target: chr5; HSP #4
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 136 - 179
Target Start/End: Original strand, 37135209 - 37135252
Alignment:
Q  136 tattgttctctacttctacgatattttattttgttttggtgtct 179  Q
    |||||||||||||||||| |||||||||| ||||||||||||||    
T  37135209 tattgttctctacttctaagatattttatgttgttttggtgtct 37135252  T

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Target: chr5; HSP #5
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 111 - 177
Target Start/End: Complemental strand, 5578613 - 5578547
Alignment:
Q  111 aaattgcagtctacttcacagatattattgttctctacttctacgatattttattttgttttggtgt 177  Q
    ||||| ||||||||||  || ||  |||| |||||||||| ||||||||||||||||||||||||||    
T  5578613 aaatttcagtctactttgcatatgctatttttctctacttttacgatattttattttgttttggtgt 5578547  T

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Target: chr5; HSP #6
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 60 - 175
Target Start/End: Complemental strand, 8806076 - 8805959
Alignment:
Q  60 tgagacgcgtttagtaatgtaaacttttttggtgttattattcttaggtg--taaattgcagtctacttcacagatattattgttctctacttctacgat 157  Q
    |||||||| ||||||||||| ||||||||| ||||||||| |||||||||   ||| | |||| ||  |   || |  ||||||| |||||||||||| |    
T  8806076 tgagacgcatttagtaatgtcaactttttttgtgttattactcttaggtgctaaaacttcagtatatgttgaaggtgctattgttatctacttctacggt 8805977  T
Q  158 attttattttgttttggt 175  Q
    ||||||||||||||||||    
T  8805976 attttattttgttttggt 8805959  T

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Target: chr5; HSP #7
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 135 - 177
Target Start/End: Original strand, 26402397 - 26402439
Alignment:
Q  135 ttattgttctctacttctacgatattttattttgttttggtgt 177  Q
    ||||||||| ||||||||||| |||||||||||||||||||||    
T  26402397 ttattgttcgctacttctacggtattttattttgttttggtgt 26402439  T

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Target: chr5; HSP #8
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 136 - 177
Target Start/End: Complemental strand, 5120480 - 5120439
Alignment:
Q  136 tattgttctctacttctacgatattttattttgttttggtgt 177  Q
    ||||||||| |||||||||| |||||||||||||||||||||    
T  5120480 tattgttctatacttctacggtattttattttgttttggtgt 5120439  T

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Target: chr5; HSP #9
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 136 - 177
Target Start/End: Complemental strand, 39537379 - 39537338
Alignment:
Q  136 tattgttctctacttctacgatattttattttgttttggtgt 177  Q
    |||| ||||||||||||| |||||||||||||||||||||||    
T  39537379 tatttttctctacttctaagatattttattttgttttggtgt 39537338  T

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Target: chr5; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 111 - 175
Target Start/End: Original strand, 29150696 - 29150760
Alignment:
Q  111 aaattgcagtctacttcacagatattattgttctctacttctacgatattttattttgttttggt 175  Q
    ||||| ||||||||||| ||  | |||||| ||||||||| |||| |||||||||||||||||||    
T  29150696 aaatttcagtctacttcgcaagtgttattgctctctacttttacggtattttattttgttttggt 29150760  T

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Target: chr5; HSP #11
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 136 - 179
Target Start/End: Complemental strand, 16686716 - 16686673
Alignment:
Q  136 tattgttctctacttctacgatattttattttgttttggtgtct 179  Q
    ||||||||| ||||| |||| |||||||||||||||||||||||    
T  16686716 tattgttctatacttatacggtattttattttgttttggtgtct 16686673  T

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Target: chr5; HSP #12
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 111 - 177
Target Start/End: Original strand, 23962949 - 23963016
Alignment:
Q  111 aaattgcagtctacttcacagatattattgttctctacttctacgata-ttttattttgttttggtgt 177  Q
    ||||| ||||||||||||||  |  |||| ||||||||||||||| || |||||||||||||||||||    
T  23962949 aaatttcagtctacttcacatgtgctatttttctctacttctacggtatttttattttgttttggtgt 23963016  T

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Target: chr5; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 111 - 177
Target Start/End: Original strand, 13490489 - 13490555
Alignment:
Q  111 aaattgcagtctacttcacagatattattgttctctacttctacgatattttattttgttttggtgt 177  Q
    ||||| ||||||||||| ||  |  |||| |||| ||||||||||| ||||||||||||||||||||    
T  13490489 aaatttcagtctacttcgcatgtgctatttttctatacttctacgacattttattttgttttggtgt 13490555  T

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Target: chr5; HSP #14
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 177 - 214
Target Start/End: Complemental strand, 13820585 - 13820548
Alignment:
Q  177 tctcaacttctacggtattttattttcttttggtgtct 214  Q
    |||| ||||||||||||||||||||| |||||||||||    
T  13820585 tctctacttctacggtattttattttgttttggtgtct 13820548  T

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Target: chr5; HSP #15
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 135 - 179
Target Start/End: Complemental strand, 13825937 - 13825893
Alignment:
Q  135 ttattgttctctacttctacgatattttattttgttttggtgtct 179  Q
    |||||||||||||||| |||| |||||| ||||||||| ||||||    
T  13825937 ttattgttctctacttttacggtattttgttttgtttttgtgtct 13825893  T

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Target: chr5; HSP #16
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 141 - 177
Target Start/End: Complemental strand, 20891102 - 20891066
Alignment:
Q  141 ttctctacttctacgatattttattttgttttggtgt 177  Q
    |||| ||||||||| ||||||||||||||||||||||    
T  20891102 ttctttacttctacaatattttattttgttttggtgt 20891066  T

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Target: scaffold1266 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold1266
Description:

Target: scaffold1266; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 111 - 179
Target Start/End: Original strand, 1672 - 1740
Alignment:
Q  111 aaattgcagtctacttcacagatattattgttctctacttctacgatattttattttgttttggtgtct 179  Q
    ||||| |||||||||||| |  | ||||||||||||||||||||| |||||||||||| |||| |||||    
T  1672 aaatttcagtctacttcataagtgttattgttctctacttctacggtattttattttggtttgctgtct 1740  T

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Target: scaffold0385 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0385
Description:

Target: scaffold0385; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 82 - 179
Target Start/End: Original strand, 1036 - 1135
Alignment:
Q  82 acttttttggtgttattattcttaggtgt--aaattgcagtctacttcacagatattattgttctctacttctacgatattttattttgttttggtgtct 179  Q
    ||||||| ||||||||||||||||||| |  |||||  |||||||||  ||  |  ||||||||| || ||||| |||||||||||||||||||||||||    
T  1036 actttttgggtgttattattcttaggttttaaaattttagtctactttgcatgtgctattgttctatatttctatgatattttattttgttttggtgtct 1135  T

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Target: scaffold0263 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0263
Description:

Target: scaffold0263; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 111 - 179
Target Start/End: Complemental strand, 18346 - 18278
Alignment:
Q  111 aaattgcagtctacttcacagatattattgttctctacttctacgatattttattttgttttggtgtct 179  Q
    ||||| |||||||||||| |  | ||||||||||||||||||| | |||||||||||| |||| |||||    
T  18346 aaatttcagtctacttcataagtgttattgttctctacttctatggtattttattttggtttgctgtct 18278  T

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Target: scaffold0116 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0116
Description:

Target: scaffold0116; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 148 - 179
Target Start/End: Original strand, 41108 - 41139
Alignment:
Q  148 cttctacgatattttattttgttttggtgtct 179  Q
    ||||||||||||||||||||||||||||||||    
T  41108 cttctacgatattttattttgttttggtgtct 41139  T

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Target: scaffold1364 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold1364
Description:

Target: scaffold1364; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 135 - 179
Target Start/End: Original strand, 1230 - 1274
Alignment:
Q  135 ttattgttctctacttctacgatattttattttgttttggtgtct 179  Q
    |||||||| |||||||||||| |||||||||||| |||| |||||    
T  1230 ttattgttttctacttctacggtattttattttggtttgatgtct 1274  T

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