View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15982_low_65 (Length: 208)
Name: NF15982_low_65
Description: NF15982
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15982_low_65 |
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Alignment Details
Target: chr4 (Bit Score: 146; Significance: 4e-77; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 146; E-Value: 4e-77
Query Start/End: Original strand, 14 - 193
Target Start/End: Original strand, 51828597 - 51828771
Alignment:
| Q |
14 |
attatactctgtttttgaccaagttcatttaatgaaa-gactatttgagacttagtttgattcaacattctaaatcccaaaattttaggaactgaattga |
112 |
Q |
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| T |
51828597 |
attatactctgtttttgaccaagttcatttaatgaaaagactatttgagacttagtttgattcaacattctaaatcccaaaattttaggaactgaattga |
51828696 |
T |
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| Q |
113 |
aaataataataataatattattatttttaccatttgtttcaggagtgtgaaggttaaagccttcgaaactacccttcttct |
193 |
Q |
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| T |
51828697 |
a------aataataatattattttttttaccatttgtttcaggagtgtgaaggttaaagccttcgaaactacccttcttct |
51828771 |
T |
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