View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15983_low_2 (Length: 430)
Name: NF15983_low_2
Description: NF15983
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15983_low_2 |
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Alignment Details
Target: chr7 (Bit Score: 391; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 391; E-Value: 0
Query Start/End: Original strand, 1 - 411
Target Start/End: Original strand, 34066615 - 34067025
Alignment:
| Q |
1 |
aaccaaacagtttgttacttcaaaataccaccagaaaatggcatcactaccctaaaacaacctcctagctgtagagtagttttcttgctcatccaattag |
100 |
Q |
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| T |
34066615 |
aaccaaacagtttgttacttcaaaataccaccagaaaatggcatctctaccctaaaacaacctcctagctgtagagtagttttcttgctcatccaattag |
34066714 |
T |
|
| Q |
101 |
gaagataactaattgtcctaatttcatcgaacctgacttttggcaggttggggaatttaagagaaatgtattcatttcctaacaactaattcaaccacat |
200 |
Q |
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| T |
34066715 |
gaagataactaattgtcctaatttcatcgaacctgacttttggcaggttggggaatttaagagaaatgtattcatttcctaacaactaattctaccacat |
34066814 |
T |
|
| Q |
201 |
gcaagcttttggatggaagaacatcatagaaaatgcagggttagaacatacaacaaacatcaaatttaacacttcaggttcataaaatagggcaaaatta |
300 |
Q |
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|||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
34066815 |
gcaaacttttggatggaagaacatcatagaaaatgcagggttagaacatacaataaacatcaaatttaacacttcaggttcataaaatagggcaaaatta |
34066914 |
T |
|
| Q |
301 |
ctgtctactaccttgatctgctgctcttctggagataaaatcttttcaagtatactatctctcaatctcctaaatgacatctttcttttcaaatcttaat |
400 |
Q |
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||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
34066915 |
ctgtctagtaccttgatctgctgctcttctggagataaaatcttttcaagtatactatctctcaatctcctaaatgacatctttcttttcaaatcttaat |
34067014 |
T |
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| Q |
401 |
caagctaaaac |
411 |
Q |
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| T |
34067015 |
caagctaaaac |
34067025 |
T |
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