View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15985_low_7 (Length: 386)
Name: NF15985_low_7
Description: NF15985
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15985_low_7 |
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Alignment Details
Target: chr3 (Bit Score: 142; Significance: 2e-74; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 198 - 375
Target Start/End: Original strand, 49863273 - 49863450
Alignment:
| Q |
198 |
ggagtggaagaaacgaaacatcaccggaatctatcatcggtggcaagatctggtaaaagtcacaaatcttattcctccctttatatttgtcaaaatatac |
297 |
Q |
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| T |
49863273 |
ggagtggaagaaacgaaacatcactggaatctatcatcggtggcaagatctggtaaaattcacaaatctcattcctccctttatatttgtctaaatatac |
49863372 |
T |
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| Q |
298 |
ctaattattttaagccattctgttttctaaatattatgtaatgaaattgtttgcttaacgattcctatgtgtgtattg |
375 |
Q |
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|||| |||||||||||||||||||||||||||||||||||||| |||||||||||| | |||||||||||| |||||| |
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| T |
49863373 |
ctaaatattttaagccattctgttttctaaatattatgtaatgcaattgtttgcttgaagattcctatgtgcgtattg |
49863450 |
T |
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