View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15986_high_22 (Length: 342)
Name: NF15986_high_22
Description: NF15986
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15986_high_22 |
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Alignment Details
Target: chr2 (Bit Score: 236; Significance: 1e-130; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 236; E-Value: 1e-130
Query Start/End: Original strand, 12 - 300
Target Start/End: Original strand, 35796968 - 35797274
Alignment:
| Q |
12 |
atgaaatagacaaacaatgagttatttaaattattcagttgtaggaaacttcaattggagcttcttaaaatgttgtaaaatgcgtagaatccaaatcaag |
111 |
Q |
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| T |
35796968 |
atgaaatagacaaacaacgagttatttaaattatttagttgtaggaaacttcaattggagcttcttaaaatgttgtaaaatgcgtagaatccaaatcaag |
35797067 |
T |
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| Q |
112 |
tctaaactagaaagaggcaattgaacccttatctcaaatacttactttatgttagaaagcttttcacttgtattccaggcaaaatttcatatcttctttc |
211 |
Q |
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| T |
35797068 |
tctaaactagaaagaggcaattgaacccttatctcaaatacttactttatgttagaaagcttttcaattgtattccaggcaaaatttcatatcttctttc |
35797167 |
T |
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| Q |
212 |
ttttctatgagttatcttgtgtaatcacaac------------------catagtgaaaagtcaaagggcttgtttaagctagtagatttgagaagacaa |
293 |
Q |
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| T |
35797168 |
ttttctatgagttatcttgtgtaatcacaaccatttttttttattccatcatagtgaaaagtcaaagggcttgtttaagctagtagatttgagaagacaa |
35797267 |
T |
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| Q |
294 |
agtcctt |
300 |
Q |
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||||||| |
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| T |
35797268 |
agtcctt |
35797274 |
T |
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