View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15986_high_30 (Length: 289)
Name: NF15986_high_30
Description: NF15986
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15986_high_30 |
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Alignment Details
Target: chr6 (Bit Score: 238; Significance: 1e-132; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 238; E-Value: 1e-132
Query Start/End: Original strand, 13 - 274
Target Start/End: Original strand, 34353923 - 34354183
Alignment:
| Q |
13 |
aatatcaactcattatcctttacatgtattttttcatatgatgtatatggacacaaagtgtttacgtgattggagtttgtcacgataatggagcttctca |
112 |
Q |
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| T |
34353923 |
aatatcaactcattaccctttacatgtattttttcatatgatgtatatgga-acaaagtgtttacgtgattggagtttgtcacgataatggagcttctca |
34354021 |
T |
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| Q |
113 |
ttttctacaatttgggtatgaaattagtggtgaaagatacataagagttagatttttcatttggccattgtgatcttggatatagaacgattcttaaggg |
212 |
Q |
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| T |
34354022 |
ttttctacaatttgggtatgaaattagtggtgaaagatacacaagagttagatttttcatttggccattgtgatcttggatatagaacgattcttaaggg |
34354121 |
T |
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| Q |
213 |
gtaagtggtggattatcaagaggtggaagcaaaagataaaatcagtgtttttggttcatttt |
274 |
Q |
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| T |
34354122 |
gtatgtggtggattatcaagacgtggaagcaaaagataaaatcagtgtttttggttcatttt |
34354183 |
T |
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