View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15986_high_36 (Length: 271)
Name: NF15986_high_36
Description: NF15986
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15986_high_36 |
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Alignment Details
Target: chr1 (Bit Score: 236; Significance: 1e-130; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 236; E-Value: 1e-130
Query Start/End: Original strand, 8 - 255
Target Start/End: Original strand, 43160144 - 43160391
Alignment:
| Q |
8 |
tgagatgaagaaaaacgtccattggactaacattagtgttgcaaaaatactggattccaatatttgtgggtttaggagaaaaaaggtccacacgttgttg |
107 |
Q |
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| T |
43160144 |
tgagttgaagaaaaacgtccattggactaacattagtgtttcaaaaatactggattccaatatttgtgggtttaggagaaaaaaggtccacacgttgttg |
43160243 |
T |
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| Q |
108 |
cttagttggtcttgtttcttgacttgtttacaataatcacacggttattcatcttttcactgatagatacactttaattagttagtgctcatgtttctaa |
207 |
Q |
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| T |
43160244 |
cttagttggtcttgtttcttgacttgtttacaataatcacacggttattcatcttttcactgatagatacactttaattagttagtgctcatgtttctaa |
43160343 |
T |
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| Q |
208 |
atatgaagaatagtacaaacttctacaagtaaaaactatagtgatcag |
255 |
Q |
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| T |
43160344 |
atatgaagaatagtacaaacttctacaaataaaaactatagtgatcag |
43160391 |
T |
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