View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF15986_low_25 (Length: 335)

Name: NF15986_low_25
Description: NF15986
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF15986_low_25
NF15986_low_25
[»] chr6 (19 HSPs)
chr6 (14-335)||(11525360-11525681)
chr6 (14-335)||(7585896-7586220)
chr6 (20-120)||(21128521-21128621)
chr6 (14-183)||(17608073-17608247)
chr6 (235-335)||(19289243-19289344)
chr6 (36-92)||(19289049-19289105)
chr6 (139-185)||(14051237-14051283)
chr6 (139-185)||(14069918-14069964)
chr6 (269-335)||(21128313-21128379)
chr6 (36-77)||(19689048-19689089)
chr6 (14-72)||(9933333-9933392)
chr6 (14-72)||(17741347-17741406)
chr6 (38-77)||(18378585-18378624)
chr6 (36-66)||(17048042-17048072)
chr6 (14-66)||(11206442-11206495)
chr6 (93-169)||(30119972-30120053)
chr6 (36-72)||(17745401-17745437)
chr6 (45-77)||(18383970-18384002)
chr6 (36-72)||(18499095-18499131)
[»] chr7 (19 HSPs)
chr7 (14-335)||(8998645-8998966)
chr7 (14-332)||(13174317-13174634)
chr7 (14-332)||(11086771-11087074)
chr7 (41-183)||(19710793-19710933)
chr7 (14-72)||(29590518-29590577)
chr7 (39-77)||(9709625-9709663)
chr7 (14-72)||(3476055-3476114)
chr7 (14-72)||(8934030-8934089)
chr7 (14-72)||(12733898-12733957)
chr7 (14-72)||(26209280-26209339)
chr7 (92-169)||(44280921-44281002)
chr7 (36-77)||(13880432-13880473)
chr7 (36-77)||(15088817-15088858)
chr7 (14-66)||(15216832-15216885)
chr7 (235-335)||(24882352-24882453)
chr7 (36-77)||(30026219-30026260)
chr7 (45-77)||(2913419-2913451)
chr7 (45-77)||(10882971-10883003)
chr7 (45-77)||(13730508-13730540)
[»] chr3 (32 HSPs)
chr3 (22-335)||(51988780-51989096)
chr3 (21-332)||(17022116-17022426)
chr3 (35-329)||(13148359-13148652)
chr3 (14-329)||(22151339-22151654)
chr3 (14-115)||(41046017-41046118)
chr3 (14-335)||(31113609-31113939)
chr3 (176-332)||(41045832-41045989)
chr3 (14-171)||(10529565-10529727)
chr3 (39-120)||(11908755-11908835)
chr3 (39-120)||(12752391-12752471)
chr3 (39-120)||(51341339-51341419)
chr3 (14-119)||(27173318-27173422)
chr3 (39-112)||(49990569-49990641)
chr3 (91-186)||(37412842-37412943)
chr3 (140-256)||(51341186-51341301)
chr3 (14-72)||(2246908-2246967)
chr3 (14-72)||(13198876-13198935)
chr3 (14-72)||(23680050-23680109)
chr3 (14-72)||(24052287-24052346)
chr3 (92-169)||(934067-934149)
chr3 (39-77)||(20627269-20627307)
chr3 (92-169)||(29460927-29461008)
chr3 (92-169)||(29471779-29471860)
chr3 (39-77)||(47208041-47208079)
chr3 (132-228)||(49990446-49990539)
chr3 (240-332)||(10529435-10529526)
chr3 (132-168)||(11908864-11908900)
chr3 (36-72)||(14581672-14581708)
chr3 (45-77)||(14969645-14969677)
chr3 (45-77)||(31303720-31303752)
chr3 (45-77)||(41495305-41495337)
chr3 (41-77)||(47405243-47405279)
[»] chr2 (24 HSPs)
chr2 (14-335)||(21025177-21025498)
chr2 (14-329)||(24814270-24814595)
chr2 (35-311)||(24793717-24794002)
chr2 (14-119)||(20646233-20646337)
chr2 (14-92)||(23392384-23392463)
chr2 (14-120)||(22755767-22755872)
chr2 (39-120)||(1084346-1084426)
chr2 (14-111)||(19312656-19312752)
chr2 (235-331)||(20646478-20646575)
chr2 (36-119)||(19297317-19297399)
chr2 (266-335)||(19299912-19299981)
chr2 (266-302)||(19312919-19312955)
chr2 (14-72)||(17968860-17968919)
chr2 (14-72)||(19497660-19497719)
chr2 (14-72)||(24275541-24275600)
chr2 (92-169)||(18768638-18768720)
chr2 (92-169)||(28721048-28721130)
chr2 (92-169)||(28731636-28731718)
chr2 (36-77)||(9015104-9015145)
chr2 (36-77)||(13963743-13963784)
chr2 (38-82)||(19540719-19540763)
chr2 (92-152)||(21172181-21172241)
chr2 (45-77)||(25829430-25829462)
chr2 (45-77)||(38781706-38781738)
[»] chr1 (34 HSPs)
chr1 (14-335)||(23065035-23065341)
chr1 (22-335)||(19038093-19038391)
chr1 (14-323)||(22019435-22019743)
chr1 (14-332)||(28380083-28380401)
chr1 (63-335)||(5929789-5930046)
chr1 (68-278)||(20255209-20255419)
chr1 (14-323)||(26547929-26548238)
chr1 (14-335)||(44201098-44201384)
chr1 (14-311)||(22655588-22655886)
chr1 (14-329)||(22642988-22643304)
chr1 (235-335)||(28474313-28474413)
chr1 (176-333)||(52350520-52350678)
chr1 (14-99)||(52350393-52350478)
chr1 (14-92)||(28474548-28474626)
chr1 (14-119)||(45070317-45070421)
chr1 (38-99)||(19170054-19170115)
chr1 (234-335)||(45070547-45070649)
chr1 (39-77)||(22599892-22599930)
chr1 (14-72)||(22609671-22609729)
chr1 (36-77)||(22154205-22154246)
chr1 (273-332)||(20251862-20251921)
chr1 (14-72)||(20799409-20799468)
chr1 (92-169)||(147971-148052)
chr1 (92-169)||(154046-154127)
chr1 (92-169)||(5974133-5974214)
chr1 (39-77)||(25448243-25448281)
chr1 (14-66)||(14387803-14387856)
chr1 (14-66)||(20883558-20883611)
chr1 (14-66)||(46180573-46180626)
chr1 (36-72)||(675915-675951)
chr1 (45-77)||(1900664-1900696)
chr1 (45-73)||(2268863-2268891)
chr1 (40-186)||(34255221-34255372)
chr1 (45-77)||(36134505-36134537)
[»] chr4 (32 HSPs)
chr4 (21-331)||(36209775-36210084)
chr4 (14-335)||(14778116-14778422)
chr4 (35-329)||(33378499-33378803)
chr4 (176-333)||(17993613-17993771)
chr4 (14-120)||(19244289-19244394)
chr4 (14-99)||(17993486-17993571)
chr4 (14-119)||(18006694-18006798)
chr4 (14-119)||(16819014-16819119)
chr4 (14-119)||(18774318-18774423)
chr4 (235-331)||(18006939-18007036)
chr4 (283-335)||(19244079-19244131)
chr4 (272-335)||(14710695-14710758)
chr4 (235-335)||(8997136-8997236)
chr4 (235-335)||(16819230-16819331)
chr4 (39-77)||(13575892-13575930)
chr4 (235-335)||(18774534-18774635)
chr4 (36-77)||(37435266-37435307)
chr4 (45-82)||(56034879-56034916)
chr4 (92-170)||(40470324-40470406)
chr4 (14-72)||(49001636-49001695)
chr4 (39-77)||(22675298-22675336)
chr4 (92-169)||(25657595-25657676)
chr4 (92-169)||(40454068-40454149)
chr4 (39-77)||(45833721-45833759)
chr4 (89-169)||(47151795-47151879)
chr4 (45-77)||(3395951-3395983)
chr4 (45-77)||(9141188-9141220)
chr4 (45-77)||(12601426-12601458)
chr4 (45-77)||(14904073-14904105)
chr4 (45-77)||(19620846-19620878)
chr4 (39-119)||(29121659-29121738)
chr4 (36-72)||(55651867-55651903)
[»] scaffold0005 (1 HSPs)
scaffold0005 (14-335)||(61308-61614)
[»] chr5 (27 HSPs)
chr5 (14-332)||(40228744-40229062)
chr5 (14-331)||(20214850-20215166)
chr5 (20-332)||(40032509-40032821)
chr5 (14-332)||(1915503-1915803)
chr5 (178-335)||(13405199-13405358)
chr5 (14-119)||(13405384-13405489)
chr5 (36-120)||(20167844-20167927)
chr5 (21-111)||(23478669-23478758)
chr5 (14-119)||(36096847-36096952)
chr5 (14-92)||(36095390-36095469)
chr5 (235-332)||(36095622-36095720)
chr5 (235-332)||(36097079-36097177)
chr5 (235-335)||(20168036-20168137)
chr5 (235-335)||(13533999-13534100)
chr5 (235-335)||(35543098-35543199)
chr5 (39-85)||(33933623-33933669)
chr5 (123-234)||(11207824-11207932)
chr5 (235-335)||(13523272-13523373)
chr5 (39-170)||(11994152-11994281)
chr5 (14-72)||(13534258-13534317)
chr5 (92-169)||(1109491-1109572)
chr5 (47-77)||(21910854-21910884)
chr5 (40-183)||(3245210-3245358)
chr5 (39-120)||(11207724-11207804)
chr5 (14-66)||(13523537-13523590)
chr5 (93-169)||(36084295-36084376)
chr5 (36-72)||(32754395-32754431)
[»] chr8 (30 HSPs)
chr8 (14-329)||(29379664-29379978)
chr8 (14-329)||(17518809-17519123)
chr8 (14-171)||(23270899-23271056)
chr8 (14-256)||(40003354-40003596)
chr8 (14-332)||(8032115-8032418)
chr8 (14-183)||(18534814-18534983)
chr8 (16-335)||(19461242-19461571)
chr8 (16-335)||(19558920-19559249)
chr8 (235-335)||(23271091-23271191)
chr8 (14-120)||(28903764-28903870)
chr8 (39-120)||(21541271-21541351)
chr8 (235-335)||(7018268-7018368)
chr8 (36-77)||(16189323-16189364)
chr8 (36-77)||(18120910-18120951)
chr8 (235-296)||(22135745-22135806)
chr8 (235-296)||(22166910-22166971)
chr8 (142-219)||(45567762-45567839)
chr8 (45-77)||(16207579-16207611)
chr8 (14-72)||(20259303-20259362)
chr8 (14-72)||(21045933-21045992)
chr8 (92-169)||(20160977-20161058)
chr8 (92-169)||(20196409-20196490)
chr8 (132-228)||(21541149-21541242)
chr8 (39-111)||(1237960-1238031)
chr8 (36-72)||(3833278-3833314)
chr8 (36-72)||(3844058-3844094)
chr8 (36-72)||(3844349-3844385)
chr8 (45-77)||(17267795-17267827)
chr8 (36-72)||(22211096-22211132)
chr8 (45-77)||(39693859-39693891)
[»] scaffold0010 (2 HSPs)
scaffold0010 (14-322)||(117378-117685)
scaffold0010 (14-331)||(61823-62124)
[»] scaffold0002 (3 HSPs)
scaffold0002 (14-311)||(481488-481769)
scaffold0002 (35-329)||(156350-156643)
scaffold0002 (36-72)||(117621-117657)
[»] scaffold0655 (1 HSPs)
scaffold0655 (35-329)||(5211-5504)
[»] scaffold0018 (1 HSPs)
scaffold0018 (14-329)||(6214-6539)
[»] scaffold0017 (2 HSPs)
scaffold0017 (14-335)||(40008-40337)
scaffold0017 (235-335)||(58783-58883)
[»] scaffold1321 (1 HSPs)
scaffold1321 (14-329)||(626-952)
[»] scaffold1263 (1 HSPs)
scaffold1263 (14-329)||(819-1145)
[»] scaffold0012 (1 HSPs)
scaffold0012 (14-335)||(7311-7642)
[»] scaffold0185 (1 HSPs)
scaffold0185 (14-335)||(9383-9712)
[»] scaffold0280 (2 HSPs)
scaffold0280 (14-120)||(17501-17606)
scaffold0280 (235-335)||(17730-17830)
[»] scaffold0544 (2 HSPs)
scaffold0544 (14-137)||(9596-9719)
scaffold0544 (266-335)||(9826-9895)
[»] scaffold0254 (2 HSPs)
scaffold0254 (235-335)||(22127-22227)
scaffold0254 (50-120)||(22335-22404)
[»] scaffold0269 (1 HSPs)
scaffold0269 (39-120)||(7599-7679)
[»] scaffold0090 (4 HSPs)
scaffold0090 (14-119)||(5485-5589)
scaffold0090 (36-119)||(1105-1187)
scaffold0090 (266-335)||(910-979)
scaffold0090 (266-335)||(5290-5359)
[»] scaffold0050 (1 HSPs)
scaffold0050 (14-92)||(35522-35600)
[»] scaffold0908 (1 HSPs)
scaffold0908 (39-120)||(3611-3691)
[»] scaffold0207 (4 HSPs)
scaffold0207 (39-120)||(20931-21011)
scaffold0207 (132-167)||(10966-11001)
scaffold0207 (132-167)||(20867-20902)
scaffold0207 (39-92)||(11057-11110)
[»] scaffold0752 (1 HSPs)
scaffold0752 (36-119)||(2312-2394)
[»] scaffold0422 (1 HSPs)
scaffold0422 (41-170)||(11983-12117)
[»] scaffold0073 (1 HSPs)
scaffold0073 (235-335)||(58565-58666)
[»] scaffold0007 (2 HSPs)
scaffold0007 (235-335)||(59183-59284)
scaffold0007 (36-72)||(59005-59041)
[»] scaffold0211 (1 HSPs)
scaffold0211 (142-228)||(15447-15533)
[»] scaffold0547 (2 HSPs)
scaffold0547 (235-335)||(983-1084)
scaffold0547 (14-64)||(1233-1284)
[»] scaffold0485 (1 HSPs)
scaffold0485 (36-77)||(9115-9156)
[»] scaffold0132 (1 HSPs)
scaffold0132 (39-120)||(37784-37863)
[»] scaffold0011 (1 HSPs)
scaffold0011 (142-219)||(164760-164837)
[»] scaffold0604 (1 HSPs)
scaffold0604 (14-72)||(269-328)
[»] scaffold0290 (1 HSPs)
scaffold0290 (38-77)||(18361-18400)
[»] scaffold0154 (1 HSPs)
scaffold0154 (14-72)||(36060-36119)
[»] scaffold0767 (1 HSPs)
scaffold0767 (92-169)||(5013-5094)
[»] scaffold0227 (1 HSPs)
scaffold0227 (39-77)||(22992-23030)
[»] scaffold0210 (1 HSPs)
scaffold0210 (36-74)||(1965-2003)
[»] scaffold0003 (1 HSPs)
scaffold0003 (39-77)||(89812-89850)
[»] scaffold0414 (1 HSPs)
scaffold0414 (39-170)||(6877-7014)
[»] scaffold0410 (1 HSPs)
scaffold0410 (14-66)||(7069-7122)
[»] scaffold0297 (1 HSPs)
scaffold0297 (47-92)||(17307-17352)
[»] scaffold0201 (1 HSPs)
scaffold0201 (14-66)||(7759-7812)
[»] scaffold0163 (2 HSPs)
scaffold0163 (14-66)||(29996-30049)
scaffold0163 (93-169)||(36535-36616)
[»] scaffold0023 (1 HSPs)
scaffold0023 (48-77)||(103888-103917)
[»] scaffold0861 (1 HSPs)
scaffold0861 (45-77)||(4694-4726)
[»] scaffold0774 (1 HSPs)
scaffold0774 (36-72)||(6061-6097)
[»] scaffold0084 (1 HSPs)
scaffold0084 (45-77)||(49649-49681)
[»] scaffold0083 (1 HSPs)
scaffold0083 (45-77)||(25739-25771)
[»] scaffold0026 (2 HSPs)
scaffold0026 (45-77)||(8228-8260)
scaffold0026 (45-77)||(60347-60379)
[»] scaffold0022 (2 HSPs)
scaffold0022 (45-77)||(39743-39775)
scaffold0022 (45-77)||(137803-137835)
[»] scaffold0004 (1 HSPs)
scaffold0004 (45-77)||(30618-30650)


Alignment Details
Target: chr6 (Bit Score: 294; Significance: 1e-165; HSPs: 19)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 294; E-Value: 1e-165
Query Start/End: Original strand, 14 - 335
Target Start/End: Original strand, 11525360 - 11525681
Alignment:
Q  14 cataggcaaagttgatcaacataataggtcttggaagaacaaaagagagcaaatgaatcaacaagaagagaaacctaaaagcatctcaagaaatctgcat 113  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||    
T  11525360 catagacaaagttgatcaacataataggtcttggaagaacaaaagagagcaaatgaatcaacaagaagagaaacctagaagcatctgaagaaatctgcat 11525459  T
Q  114 ctgaagtctaaagtgcgtctgaagccaaagtgcatctgatgacgtcatcagaagcaaatccgtcagaagcaagaccttcagaagccatttgttcagaagc 213  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  11525460 ctgaagtctaaagtgcgtctgaagccaaagtgcatctgatgacgtcatcagaagcaaatccgtcagaagcaagacattcagaagccatttgttcagaagc 11525559  T
Q  214 tgtataacatcagaatctgcaagttgatcagaagattcaacctgaagactctaagagctgtctattgaatttaacctcgtctaagagagagaaagactca 313  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||    
T  11525560 tgtataacatcagaatctacaagttgatcagaagattcaacctgaagactctaagagctgtctattggatttaacctcgtctaagagagcgaaagactca 11525659  T
Q  314 aaggaaggtgccaacgttcatt 335  Q
    ||||||||||||||||||||||    
T  11525660 aaggaaggtgccaacgttcatt 11525681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 216; E-Value: 1e-118
Query Start/End: Original strand, 14 - 335
Target Start/End: Original strand, 7585896 - 7586220
Alignment:
Q  14 cataggcaaagttgatcaacataataggtcttggaagaacaaaagagagcaaatgaatcaacaagaagagaaacctaaaagcatctcaagaaatctgcat 113  Q
    ||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||| ||||||||  |||    
T  7585896 catagacaaagttgatcaacataataggtcttggaagaacaaaagaaagcaaatgaatcaacaagaagagaaacctagaagcatctgaagaaatcaacat 7585995  T
Q  114 ctgaagtctaaagtgcgtctgaagccaaagtgcatctgatgacg---tcatcagaagcaaatccgtcagaagcaagaccttcagaagccatttgttcaga 210  Q
    |||||||||| |||||||||||||||||| ||||||||||||||   |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7585996 ctgaagtctatagtgcgtctgaagccaaaatgcatctgatgacgtcatcatcagaagcaaatccgtcagaagcaagaccttcagaagccatttgttcaga 7586095  T
Q  211 agctgtat-aacatcagaatctgcaagttgatcagaagattcaacctgaagactctaagagctgtctattgaatttaacctcgtctaagagagagaaaga 309  Q
    |||| ||| |||||||||| ||| |||||| |||| |||||||||||||||  || || ||||||||| || ||||||||||||||||||||| ||||||    
T  7586096 agctatataaacatcagaaactg-aagttgttcaggagattcaacctgaagtttcaaatagctgtctagtggatttaacctcgtctaagagagcgaaaga 7586194  T
Q  310 ctcaaaggaaggtgccaacgttcatt 335  Q
    || |||||||||||||||||||||||    
T  7586195 ctaaaaggaaggtgccaacgttcatt 7586220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 20 - 120
Target Start/End: Complemental strand, 21128621 - 21128521
Alignment:
Q  20 caaagttgatcaacataataggtcttggaagaacaaaagagagcaaatgaatcaacaagaagagaaacctaaaagcatctcaagaaatctgcatctgaag 119  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||| |||||| |||  |||||||    
T  21128621 caaagttaatcaacataataggtcttggaagaacaaaagagagcaaaggaatcaacaagaagagaaacctagaagcatctgaagaaaactgtgtctgaag 21128522  T
Q  120 t 120  Q
    |    
T  21128521 t 21128521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 14 - 183
Target Start/End: Original strand, 17608073 - 17608247
Alignment:
Q  14 cataggcaaagttgatcaacataataggtcttggaagaacaaaagagagcaaatgaatcaacaagaagagaaacctaaaagcatctcaagaaatctgcat 113  Q
    ||||| ||||||||||||   ||| ||||||||||||||||||||||||||||||||||||||| ||||||| ||| ||||||||| |||||| || | |    
T  17608073 catagacaaagttgatcattttaaaaggtcttggaagaacaaaagagagcaaatgaatcaacaaaaagagaagcct-aaagcatctgaagaaaactacgt 17608171  T
Q  114 ctgaag-tctaaagtgcgtctgaagccaaagtgcatc-----tgatgacgtcatcagaagcaaatccgtcagaagc 183  Q
    |||||| | | ||||||  |||||| |||||||| ||     ||||||||||||||||||||| | | ||||||||    
T  17608172 ctgaagttttgaagtgctcctgaagacaaagtgcctctgaagtgatgacgtcatcagaagcaagttcatcagaagc 17608247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 235 - 335
Target Start/End: Original strand, 19289243 - 19289344
Alignment:
Q  235 agttgatcagaagattcaacctgaagactctaa-gagctgtctattgaatttaacctcgtctaagagagagaaagactcaaaggaaggtgccaacgttca 333  Q
    ||||||||||||||||||| |||||  ||| || ||||||||| ||||| ||||||||| ||||||||| ||| ||   ||||| |||||||||||||||    
T  19289243 agttgatcagaagattcaatctgaaatctcaaaagagctgtctcttgaagttaacctcgcctaagagagcgaaggatcaaaagggaggtgccaacgttca 19289342  T
Q  334 tt 335  Q
    ||    
T  19289343 tt 19289344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 36 - 92
Target Start/End: Original strand, 19289049 - 19289105
Alignment:
Q  36 aataggtcttggaagaacaaaagagagcaaatgaatcaacaagaagagaaacctaaa 92  Q
    ||||||||||||||||||||||||||||||| ||| || ||||||||| ||||||||    
T  19289049 aataggtcttggaagaacaaaagagagcaaaggaaccatcaagaagaggaacctaaa 19289105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 139 - 185
Target Start/End: Original strand, 14051237 - 14051283
Alignment:
Q  139 caaagtgcatctgatgacgtcatcagaagcaaatccgtcagaagcaa 185  Q
    ||||||||| |||||||||||||||||||||| ||| ||||||||||    
T  14051237 caaagtgcacctgatgacgtcatcagaagcaagtccatcagaagcaa 14051283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 139 - 185
Target Start/End: Original strand, 14069918 - 14069964
Alignment:
Q  139 caaagtgcatctgatgacgtcatcagaagcaaatccgtcagaagcaa 185  Q
    ||||||||| |||||||||||||||||||||| ||| ||||||||||    
T  14069918 caaagtgcacctgatgacgtcatcagaagcaagtccatcagaagcaa 14069964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 269 - 335
Target Start/End: Complemental strand, 21128379 - 21128313
Alignment:
Q  269 agctgtctattgaatttaacctcgtctaagagagagaaagactcaaaggaaggtgccaacgttcatt 335  Q
    |||||||||||| ||| |||||||||||||| || |||||||| || | |||||| |||||||||||    
T  21128379 agctgtctattggattcaacctcgtctaagaaagcgaaagactaaaggaaaggtggcaacgttcatt 21128313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 36 - 77
Target Start/End: Complemental strand, 19689089 - 19689048
Alignment:
Q  36 aataggtcttggaagaacaaaagagagcaaatgaatcaacaa 77  Q
    |||||||  |||||||||||||||||||||||||||||||||    
T  19689089 aataggttctggaagaacaaaagagagcaaatgaatcaacaa 19689048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 14 - 72
Target Start/End: Original strand, 9933333 - 9933392
Alignment:
Q  14 cataggcaaagttgatcaacat-aataggtcttggaagaacaaaagagagcaaatgaatc 72  Q
    ||||||||||||| |||||  | |||||||||||||||||||| |||||||||| |||||    
T  9933333 cataggcaaagttaatcaatttcaataggtcttggaagaacaatagagagcaaaggaatc 9933392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 14 - 72
Target Start/End: Original strand, 17741347 - 17741406
Alignment:
Q  14 cataggcaaagttgatcaacat-aataggtcttggaagaacaaaagagagcaaatgaatc 72  Q
    ||||||||||||| |||||  | |||||||||||||||||||| |||||||||| |||||    
T  17741347 cataggcaaagttaatcaatttcaataggtcttggaagaacaatagagagcaaaggaatc 17741406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 38 - 77
Target Start/End: Complemental strand, 18378624 - 18378585
Alignment:
Q  38 taggtcttggaagaacaaaagagagcaaatgaatcaacaa 77  Q
    ||||||||||||||||||||||||| ||| ||||||||||    
T  18378624 taggtcttggaagaacaaaagagagtaaaggaatcaacaa 18378585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 36 - 66
Target Start/End: Complemental strand, 17048072 - 17048042
Alignment:
Q  36 aataggtcttggaagaacaaaagagagcaaa 66  Q
    |||||||||||||||||||||||||||||||    
T  17048072 aataggtcttggaagaacaaaagagagcaaa 17048042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 14 - 66
Target Start/End: Complemental strand, 11206495 - 11206442
Alignment:
Q  14 cataggcaaagttgatcaacat-aataggtcttggaagaacaaaagagagcaaa 66  Q
    ||||||||||||| |||||  | ||||||||||||||||||||| |||||||||    
T  11206495 cataggcaaagttaatcaatttcaataggtcttggaagaacaaacgagagcaaa 11206442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 93 - 169
Target Start/End: Original strand, 30119972 - 30120053
Alignment:
Q  93 agcatctcaagaaatctgcatctgaagtctaaagtgcgtctgaagccaaagtgcatc-----tgatgacgtcatcagaagca 169  Q
    ||||||| |||||| |||| |||||||  |||||||| ||||||||  |||||||||     ||||||||||||||||||||    
T  30119972 agcatctgaagaaaactgcgtctgaagcttaaagtgcttctgaagctgaagtgcatctgaagtgatgacgtcatcagaagca 30120053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 36 - 72
Target Start/End: Original strand, 17745401 - 17745437
Alignment:
Q  36 aataggtcttggaagaacaaaagagagcaaatgaatc 72  Q
    ||||||||||||||||||||  |||||||||||||||    
T  17745401 aataggtcttggaagaacaatggagagcaaatgaatc 17745437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 45 - 77
Target Start/End: Complemental strand, 18384002 - 18383970
Alignment:
Q  45 tggaagaacaaaagagagcaaatgaatcaacaa 77  Q
    |||||||||||||||||||||| ||||||||||    
T  18384002 tggaagaacaaaagagagcaaaggaatcaacaa 18383970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 36 - 72
Target Start/End: Complemental strand, 18499131 - 18499095
Alignment:
Q  36 aataggtcttggaagaacaaaagagagcaaatgaatc 72  Q
    |||||||||||||||||||| |||||||||| |||||    
T  18499131 aataggtcttggaagaacaatagagagcaaaggaatc 18499095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 258; Significance: 1e-143; HSPs: 19)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 258; E-Value: 1e-143
Query Start/End: Original strand, 14 - 335
Target Start/End: Original strand, 8998645 - 8998966
Alignment:
Q  14 cataggcaaagttgatcaacataataggtcttggaagaacaaaagagagcaaatgaatcaacaagaagagaaacctaaaagcatctcaagaaatctgcat 113  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||| |||||||||||||    
T  8998645 catagacaaagttgatcaacataataggtcttggaagaacaaaagagagcaaaggaatcaacaagaagagaaacctagaagcatctgaagaaatctgcat 8998744  T
Q  114 ctgaagtctaaagtgcgtctgaagccaaagtgcatctgatgacgtcatcagaagcaaatccgtcagaagcaagaccttcagaagccatttgttcagaagc 213  Q
    ||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||| ||||||||||||    
T  8998745 ctgaagtctgaagtgcgtctgaagccaaaatgcatctgatgacgtcatcagaagcaaatccttcataagcaagaccttcagaagccaattgttcagaagc 8998844  T
Q  214 tgtataacatcagaatctgcaagttgatcagaagattcaacctgaagactctaagagctgtctattgaatttaacctcgtctaagagagagaaagactca 313  Q
    |||||||||| |||| ||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||| || |||||||| |    
T  8998845 tgtataacattagaaactgcaagttgatcagaagattcaacctgaagtctctaagagctgtctattggatttaacctcgtctaagaaagtgaaagactaa 8998944  T
Q  314 aaggaaggtgccaacgttcatt 335  Q
    ||||||||||||||||||||||    
T  8998945 aaggaaggtgccaacgttcatt 8998966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 14 - 332
Target Start/End: Original strand, 13174317 - 13174634
Alignment:
Q  14 cataggcaaagttgatcaacataataggtcttggaagaacaaaagagagcaaatgaatcaacaagaagagaaacctaaaagcatctcaagaaatctgcat 113  Q
    ||||| ||||||| |||||  ||||||||||||||||||||||||||||| || |||||| |||||||||||||||| |||||||| ||||||||||| |    
T  13174317 catagacaaagttaatcaatttaataggtcttggaagaacaaaagagagctaaggaatcatcaagaagagaaacctacaagcatctgaagaaatctgcct 13174416  T
Q  114 ctgaagtctaaagtgcgtctgaagccaaagtgcatctgatgacgtcatcagaagcaaatccgtcagaagcaagaccttcagaagccatttgttcagaagc 213  Q
    |||||||  ||||||| |||||||||||| ||||||| ||||||||||||||||||||||  ||||||||||||||||||||||| | ||||||||||||    
T  13174417 ctgaagttgaaagtgcttctgaagccaaaatgcatctaatgacgtcatcagaagcaaatctatcagaagcaagaccttcagaagctaattgttcagaagc 13174516  T
Q  214 tgtataacatcagaatctgcaagttgatcagaagattcaacctgaagactctaagagctgtctattgaatttaacctcgtctaagagagagaaagactca 313  Q
    |||||| |||||||| ||| ||||||||||||||||||||||||||| ||| || |||||||||||| ||| |||||||||||||| ||||||||||| |    
T  13174517 tgtatatcatcagaaactg-aagttgatcagaagattcaacctgaagtctcaaatagctgtctattggattcaacctcgtctaagaaagagaaagactaa 13174615  T
Q  314 aaggaaggtgccaacgttc 332  Q
    | |||||||||||||||||    
T  13174616 agggaaggtgccaacgttc 13174634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 126; E-Value: 6e-65
Query Start/End: Original strand, 14 - 332
Target Start/End: Original strand, 11086771 - 11087074
Alignment:
Q  14 cataggcaaagttgatcaacataataggtcttggaagaacaaaagagagcaaatgaatcaacaagaagagaaacctaaaagcatctcaagaaatctgcat 113  Q
    ||||| |||||||||||||  |||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||| | ||||||||||| |    
T  11086771 catagacaaagttgatcaatttaataggtcttggaagaacaaaagagagcaaaggaatcaacaagaagagaaacctagaagcatatgaagaaatctgcct 11086870  T
Q  114 ctgaagtctaaagtgcgtctgaagccaaagtgcatctgatgacgtcatcagaagcaaatccgtcagaagcaagaccttcagaagccatttgttcagaagc 213  Q
    |||||||  ||||||||||| |||||||| ||||| |||||||||||               ||||||||||||||||||||||||| ||||||||||||    
T  11086871 ctgaagttgaaagtgcgtctaaagccaaaatgcatttgatgacgtca---------------tcagaagcaagaccttcagaagccaattgttcagaagc 11086955  T
Q  214 tgtat-aacatcagaatctgcaagttgatcagaagattcaacctgaagactctaagagctgtctattgaatttaacctcgtctaagagagagaaagactc 312  Q
    | ||| |||| || || ||| ||||||||||| |||||||| ||||||  || || |||||||||||| ||| ||||||||| |||| |  ||||||||     
T  11086956 tatataaacaccataaactg-aagttgatcaggagattcaatctgaagtttcaaacagctgtctattggattcaacctcgtcaaagaaaacgaaagacta 11087054  T
Q  313 aaaggaaggtgccaacgttc 332  Q
    |||||||||| |||||||||    
T  11087055 aaaggaaggtaccaacgttc 11087074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 41 - 183
Target Start/End: Original strand, 19710793 - 19710933
Alignment:
Q  41 gtcttggaagaacaaaagagagcaaatgaatcaacaagaagagaaacctaaaagcatctcaagaaatctgcatctgaagtctaaagtgcgtctgaagcca 140  Q
    ||||||||||||||||||||||||||||||||||||| ||||||| ||| ||||||||| || |||||||| |||||||| |||| |||  ||||||  |    
T  19710793 gtcttggaagaacaaaagagagcaaatgaatcaacaaaaagagaagcct-aaagcatctgaaaaaatctgcctctgaagt-taaaatgctcctgaagata 19710890  T
Q  141 aagtgcatctgatgacgtcatcagaagcaaatccgtcagaagc 183  Q
     ||| || |||||||||||||||||||||| ||  ||||||||    
T  19710891 cagtacacctgatgacgtcatcagaagcaagtctatcagaagc 19710933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 14 - 72
Target Start/End: Complemental strand, 29590577 - 29590518
Alignment:
Q  14 cataggcaaagttgatcaacat-aataggtcttggaagaacaaaagagagcaaatgaatc 72  Q
    ||||||||||||| |||||  | |||||||||||||||||||| ||||||||||||||||    
T  29590577 cataggcaaagttaatcaatttcaataggtcttggaagaacaatagagagcaaatgaatc 29590518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 39 - 77
Target Start/End: Original strand, 9709625 - 9709663
Alignment:
Q  39 aggtcttggaagaacaaaagagagcaaatgaatcaacaa 77  Q
    ||||||||||||||||| |||||||||||||||||||||    
T  9709625 aggtcttggaagaacaatagagagcaaatgaatcaacaa 9709663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 14 - 72
Target Start/End: Original strand, 3476055 - 3476114
Alignment:
Q  14 cataggcaaagttgatcaacat-aataggtcttggaagaacaaaagagagcaaatgaatc 72  Q
    ||||||||||||| |||||  | |||||||||||||||||||| |||||||||| |||||    
T  3476055 cataggcaaagttaatcaatttcaataggtcttggaagaacaatagagagcaaaggaatc 3476114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 14 - 72
Target Start/End: Complemental strand, 8934089 - 8934030
Alignment:
Q  14 cataggcaaagttgatcaacat-aataggtcttggaagaacaaaagagagcaaatgaatc 72  Q
    ||||||||||||| |||||  | |||||||||||||||||||| |||||||||| |||||    
T  8934089 cataggcaaagttaatcaatttcaataggtcttggaagaacaatagagagcaaaggaatc 8934030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 14 - 72
Target Start/End: Original strand, 12733898 - 12733957
Alignment:
Q  14 cataggcaaagttgatcaacat-aataggtcttggaagaacaaaagagagcaaatgaatc 72  Q
    ||||||||||||| |||||  | |||||||||||||||||||| |||||||||| |||||    
T  12733898 cataggcaaagttaatcaatttcaataggtcttggaagaacaatagagagcaaaggaatc 12733957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 14 - 72
Target Start/End: Original strand, 26209280 - 26209339
Alignment:
Q  14 cataggcaaagttgatcaacat-aataggtcttggaagaacaaaagagagcaaatgaatc 72  Q
    ||||||||||||| |||||  | |||||||||||||||||||| |||||||||| |||||    
T  26209280 cataggcaaagttaatcaatttcaataggtcttggaagaacaatagagagcaaaggaatc 26209339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 92 - 169
Target Start/End: Complemental strand, 44281002 - 44280921
Alignment:
Q  92 aagcatctcaagaaatctgcatctgaagtctaaagtgcgtctgaagccaaagtgcatctga-----tgacgtcatcagaagca 169  Q
    |||||||| |||||| |||| ||||||| ||||||||| ||||||||  ||||||||||||     |||||||||||||||||    
T  44281002 aagcatctgaagaaaactgcgtctgaag-ctaaagtgcttctgaagctgaagtgcatctgaagtgatgacgtcatcagaagca 44280921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 36 - 77
Target Start/End: Complemental strand, 13880473 - 13880432
Alignment:
Q  36 aataggtcttggaagaacaaaagagagcaaatgaatcaacaa 77  Q
    |||||||  |||||||||||||||||||||| ||||||||||    
T  13880473 aataggttctggaagaacaaaagagagcaaaggaatcaacaa 13880432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 36 - 77
Target Start/End: Complemental strand, 15088858 - 15088817
Alignment:
Q  36 aataggtcttggaagaacaaaagagagcaaatgaatcaacaa 77  Q
    |||||||  |||||||||||||||||||||| ||||||||||    
T  15088858 aataggttctggaagaacaaaagagagcaaaggaatcaacaa 15088817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 14 - 66
Target Start/End: Complemental strand, 15216885 - 15216832
Alignment:
Q  14 cataggcaaagttgatcaacat-aataggtcttggaagaacaaaagagagcaaa 66  Q
    ||||||||||||| |||||  | |||||||||||||||||||| ||||||||||    
T  15216885 cataggcaaagttaatcaatttcaataggtcttggaagaacaatagagagcaaa 15216832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 235 - 335
Target Start/End: Original strand, 24882352 - 24882453
Alignment:
Q  235 agttgatcagaagattcaacctgaagactctaa-gagctgtctattgaatttaacctcgtctaagagagagaaagactcaaaggaaggtgccaacgttca 333  Q
    ||||||||||||||||||| |||||  ||| || ||||||| |  | || ||||||||||||||||||| ||| ||   ||||| | |||||||||||||    
T  24882352 agttgatcagaagattcaatctgaaatctcaaaagagctgtttcattaagttaacctcgtctaagagagcgaacgatcaaaagggaagtgccaacgttca 24882451  T
Q  334 tt 335  Q
    ||    
T  24882452 tt 24882453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 36 - 77
Target Start/End: Complemental strand, 30026260 - 30026219
Alignment:
Q  36 aataggtcttggaagaacaaaagagagcaaatgaatcaacaa 77  Q
    |||||||  |||||||||||||||||||||| ||||||||||    
T  30026260 aataggttatggaagaacaaaagagagcaaaggaatcaacaa 30026219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 45 - 77
Target Start/End: Original strand, 2913419 - 2913451
Alignment:
Q  45 tggaagaacaaaagagagcaaatgaatcaacaa 77  Q
    |||||||||||||||||||||| ||||||||||    
T  2913419 tggaagaacaaaagagagcaaaggaatcaacaa 2913451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 45 - 77
Target Start/End: Original strand, 10882971 - 10883003
Alignment:
Q  45 tggaagaacaaaagagagcaaatgaatcaacaa 77  Q
    |||||||||||||||||||||| ||||||||||    
T  10882971 tggaagaacaaaagagagcaaaggaatcaacaa 10883003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 45 - 77
Target Start/End: Original strand, 13730508 - 13730540
Alignment:
Q  45 tggaagaacaaaagagagcaaatgaatcaacaa 77  Q
    |||||||||||||||||||||| ||||||||||    
T  13730508 tggaagaacaaaagagagcaaaggaatcaacaa 13730540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 251; Significance: 1e-139; HSPs: 32)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 251; E-Value: 1e-139
Query Start/End: Original strand, 22 - 335
Target Start/End: Original strand, 51988780 - 51989096
Alignment:
Q  22 aagttgatcaacataataggtcttggaagaacaaaagagagcaaatgaatcaacaagaagagaa---acctaaaagcatctcaagaaatctgcatctgaa 118  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||   ||||| |||||||| |||||||| |||| ||||    
T  51988780 aagttgatcaacataataggtcttggaagaacaaaagagagcaaaggaatcaacaagaagagaagaaacctagaagcatctgaagaaatcagcatttgaa 51988879  T
Q  119 gtctaaagtgcgtctgaagccaaagtgcatctgatgacgtcatcagaagcaaatccgtcagaagcaagaccttcagaagccatttgttcagaagctgtat 218  Q
    |||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  51988880 gtctaaagtgcgtctgaagccaaaatgcatatgatgacgtcatcagaagcaaatccgtcagaagcaagaccttcagaacccatttgttcagaagctgtat 51988979  T
Q  219 aacatcagaatctgcaagttgatcagaagattcaacctgaagactctaagagctgtctattgaatttaacctcgtctaagagagagaaagactcaaagga 318  Q
    |||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||| ||||||    
T  51988980 aacatcagaaactgcaagttgattagaagattcaacctgaagactctaagagctgtctattggatttaacctcgtctaagagagcgaaagactaaaagga 51989079  T
Q  319 aggtgccaacgttcatt 335  Q
    |||||||||||||||||    
T  51989080 aggtgccaacgttcatt 51989096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 172; E-Value: 2e-92
Query Start/End: Original strand, 21 - 332
Target Start/End: Complemental strand, 17022426 - 17022116
Alignment:
Q  21 aaagttgatcaacataataggtcttggaagaacaaaagagagcaaatgaatcaacaagaagagaaacctaaaagcatctcaagaaatctgcatctgaagt 120  Q
    |||||| |||||  ||||||||||||||||||||||||||||| || |||||| |||||||||||||||| |||||||| ||||||||||| || |||||    
T  17022426 aaagttaatcaatttaataggtcttggaagaacaaaagagagctaaggaatcatcaagaagagaaacctagaagcatctgaagaaatctgcctcggaagt 17022327  T
Q  121 ctaaagtgcgtctgaagccaaagtgcatctgatgacgtcatcagaagcaaatccgtcagaagcaagaccttcagaagccatttgttcagaagctgtataa 220  Q
      ||||||| ||||||||| || ||||| ||||||||||||||||||||||||  |||||||||||| ||||||||||||  ||||||||||||||||||    
T  17022326 tgaaagtgcttctgaagcctaaatgcatttgatgacgtcatcagaagcaaatctatcagaagcaagaacttcagaagccaactgttcagaagctgtataa 17022227  T
Q  221 catcagaatctgcaagttgatcagaagattcaacctgaagactctaagagctgtctattgaatttaacctcgtctaagagagagaaagactcaaaggaag 320  Q
    ||||| || ||| |||||||||||||||||||||||||||  || || |||||||||||| ||| |||||||||||||| || |||||||| || |||||    
T  17022226 catcaaaaactg-aagttgatcagaagattcaacctgaagtttcaaatagctgtctattggattcaacctcgtctaagaaagcgaaagactaaagggaag 17022128  T
Q  321 gtgccaacgttc 332  Q
    ||||||||||||    
T  17022127 gtgccaacgttc 17022116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 140; E-Value: 3e-73
Query Start/End: Original strand, 35 - 329
Target Start/End: Complemental strand, 13148652 - 13148359
Alignment:
Q  35 taataggtcttggaagaacaaaagagagcaaatgaatcaacaagaagagaaacctaaaagcatctcaagaaatctgcatctgaagtctaaagtgcgtctg 134  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||| ||||||||||| ||||||||  ||||||| ||||    
T  13148652 taataggtcttggaagaacaaaagagagcaaaggaatcaacaagaagagaaacct-aaagcatctgaagaaatctgcctctgaagttgaaagtgcttctg 13148554  T
Q  135 aagccaaagtgcatctgatgacgtcatcagaagcaaatccgtcagaagcaagaccttcagaagcc-atttgttcagaagctgtataacatcagaatctgc 233  Q
    |||||||| |||||||||||||||||||| |||  | |   ||||||||||| |||||||||||| ||||| |||||||||||||| |  ||||| |||     
T  13148553 aagccaaaatgcatctgatgacgtcatcaaaagtgagtttatcagaagcaagtccttcagaagccaatttgatcagaagctgtatatcgccagaaactg- 13148455  T
Q  234 aagttgatcagaagattcaacctgaagactctaagagctgtctattgaatttaacctcgtctaagagagagaaagactcaaaggaaggtgccaacg 329  Q
    |||||||||||||||| ||||||||||  || || |||||||||||| ||| |||||||||||||| || |||||||| || | |||||| |||||    
T  13148454 aagttgatcagaagatgcaacctgaagtttcaaatagctgtctattggattcaacctcgtctaagaaagcgaaagactaaaggaaaggtggcaacg 13148359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 14 - 329
Target Start/End: Complemental strand, 22151654 - 22151339
Alignment:
Q  14 cataggcaaagttgatcaacat-aataggtcttggaagaacaaaagagagcaaatgaatcaacaagaagagaaacctaaaagcatctcaagaaatctgca 112  Q
    ||||| |||||||||||||  | ||||||||||| || |||||||||||||||| |||||||||| ||||||||||| ||||||||| ||||| |||||     
T  22151654 catagacaaagttgatcaaatttaataggtcttgtaaaaacaaaagagagcaaaggaatcaacaaaaagagaaacct-aaagcatctgaagaattctgcc 22151556  T
Q  113 tctgaagtctaaagtgcgtctgaagccaaagtgcatctgatgacgtcatcagaagcaaatccgtcagaagcaagaccttcagaagcc-atttgttcagaa 211  Q
    | ||||||  ||||||| |||||||||||| |||||||||||| |||||||||||  | |   |||||||||||||||||||||||| ||||| ||||||    
T  22151555 tttgaagttgaaagtgcttctgaagccaaaatgcatctgatgatgtcatcagaagtgagtttatcagaagcaagaccttcagaagccaatttgatcagaa 22151456  T
Q  212 gctgtataacatcagaatctgcaagttgatcagaagattcaacctgaagactctaagagctgtctattgaatttaacctcgtctaagagagagaaagact 311  Q
    ||||||||||| ||||| ||| |||||||||||||||||||||||||||  || || |||||| | ||| ||| |||||||||||||| || ||||||||    
T  22151455 gctgtataacaccagaaactg-aagttgatcagaagattcaacctgaagtttcaaatagctgttttttggattcaacctcgtctaagaaagcgaaagact 22151357  T
Q  312 caaaggaaggtgccaacg 329  Q
     || | |||||| |||||    
T  22151356 aaaggaaaggtggcaacg 22151339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 14 - 115
Target Start/End: Complemental strand, 41046118 - 41046017
Alignment:
Q  14 cataggcaaagttgatcaacataataggtcttggaagaacaaaagagagcaaatgaatcaacaagaagagaaacctaaaagcatctcaagaaatctgcat 113  Q
    ||||| |||||||||||||  ||||||||||||||| |||||||||||||||| ||||||||  ||||||||||||| |||||||| |||||||||||||    
T  41046118 catagacaaagttgatcaatttaataggtcttggaaaaacaaaagagagcaaaggaatcaacgtgaagagaaacctataagcatctgaagaaatctgcat 41046019  T
Q  114 ct 115  Q
    ||    
T  41046018 ct 41046017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 14 - 335
Target Start/End: Original strand, 31113609 - 31113939
Alignment:
Q  14 cataggcaaagttgatcaacataataggtcttggaagaacaaaagagagc-aaatgaatcaacaagaagagaaacctaaaagcatctcaagaaatctgca 112  Q
    |||||||||||||||||||  ||||||||||||||||||||||||| ||| |||  ||||| ||||||||| ||||| ||||||||| |||||| ||||     
T  31113609 cataggcaaagttgatcaatttaataggtcttggaagaacaaaagaaagcaaaaaaaatcatcaagaagaggaacct-aaagcatctgaagaaaactgcg 31113707  T
Q  113 tctgaag-tctaaagtgcgtctgaag-ccaaagtgcatctg-----atgacgtcatcagaagca-aatccgtcagaagcaaga-ccttcagaagccattt 203  Q
    ||||||| | | |||||| |||||||    |||||| ||||     |||||||||||||||||| ||  | ||||||| || |  | |||||||| | ||    
T  31113708 tctgaagttttgaagtgcttctgaagtttcaagtgcctctgaagtaatgacgtcatcagaagcagaactcatcagaagaaaaattcatcagaagcaactt 31113807  T
Q  204 gttcagaagctgtat-aacatcagaatctgcaagttgatcagaagattcaacctgaagactctaagagctgtctattgaatttaacctcgtctaagagag 302  Q
      ||||||||| ||| | || ||||| || | ||||||||||||||||||| |||||  ||| ||  ||||| ||||| |||||||||||||||||||||    
T  31113808 catcagaagctatatcatcaccagaagctac-agttgatcagaagattcaatctgaaagctcaaatggctgtttattggatttaacctcgtctaagagag 31113906  T
Q  303 agaaagactcaaaggaaggtgccaacgttcatt 335  Q
     |||||||| ||||| | ||| ||| |||||||    
T  31113907 cgaaagactaaaagggaagtgacaatgttcatt 31113939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 176 - 332
Target Start/End: Complemental strand, 41045989 - 41045832
Alignment:
Q  176 tcagaagcaagaccttcagaagccatttgttcagaagctgtataa-catcagaatctgcaagttgatcagaagattcaacctgaagactctaagagctgt 274  Q
    |||||||||||||| ||| |||| | ||||||||||||| ||||| |||||||| ||| ||||||||||| |||||||||||||||  || || ||||||    
T  41045989 tcagaagcaagaccctcataagctaattgttcagaagctatataatcatcagaaactg-aagttgatcaggagattcaacctgaagtttcaaatagctgt 41045891  T
Q  275 ctattgaatttaacctcgtctaagagagagaaagactcaaa-ggaaggtgccaacgttc 332  Q
    ||| || ||| |||||| ||||||| || |||||||| ||| ||||| |||||||||||    
T  41045890 ctagtggattcaacctcatctaagaaagcgaaagactaaaagggaagatgccaacgttc 41045832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 14 - 171
Target Start/End: Complemental strand, 10529727 - 10529565
Alignment:
Q  14 cataggcaaagttgatcaacataataggtcttggaagaacaaaagagagcaaatgaatcaacaagaagagaaacctaaaagcatctcaagaaatctgcat 113  Q
    ||||| |||||||||||||  ||||||||||||||||||||||||||||||||   |||||||||||||||| ||||||| ||||| |||||| |||| |    
T  10529727 catagacaaagttgatcaatttaataggtcttggaagaacaaaagagagcaaagatatcaacaagaagagaagcctaaaa-catctgaagaaaactgcgt 10529629  T
Q  114 ctgaag-tctaaagtgcgtctgaagccaaagtgcatc-----tgatgacgtcatcagaagcaaa 171  Q
     ||||| | |  |||||  |||||| |||||||| ||     ||||||||||||||||||||||    
T  10529628 gtgaagttatggagtgctcctgaagacaaagtgcctctgaagtgatgacgtcatcagaagcaaa 10529565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 39 - 120
Target Start/End: Original strand, 11908755 - 11908835
Alignment:
Q  39 aggtcttggaagaacaaaagagagcaaatgaatcaacaagaagagaaacctaaaagcatctcaagaaatctgcatctgaagt 120  Q
    |||||||||||||||||||||||||||| |||||||||| ||||||| ||| ||||||||| ||||||||||| ||||||||    
T  11908755 aggtcttggaagaacaaaagagagcaaaggaatcaacaaaaagagaagcct-aaagcatctgaagaaatctgcctctgaagt 11908835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 39 - 120
Target Start/End: Original strand, 12752391 - 12752471
Alignment:
Q  39 aggtcttggaagaacaaaagagagcaaatgaatcaacaagaagagaaacctaaaagcatctcaagaaatctgcatctgaagt 120  Q
    |||||||||||||||||||||||||||| |||||||||| ||||||| ||| ||||||||| ||||||||||| ||||||||    
T  12752391 aggtcttggaagaacaaaagagagcaaaagaatcaacaaaaagagaagcct-aaagcatctgaagaaatctgcctctgaagt 12752471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 39 - 120
Target Start/End: Complemental strand, 51341419 - 51341339
Alignment:
Q  39 aggtcttggaagaacaaaagagagcaaatgaatcaacaagaagagaaacctaaaagcatctcaagaaatctgcatctgaagt 120  Q
    |||||||||||||||||||||||||||| |||| ||||| ||||||| ||| ||||||||| || |||||||| | ||||||    
T  51341419 aggtcttggaagaacaaaagagagcaaaagaattaacaaaaagagaagcct-aaagcatctgaaaaaatctgcctttgaagt 51341339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 14 - 119
Target Start/End: Complemental strand, 27173422 - 27173318
Alignment:
Q  14 cataggcaaagttgatcaacataataggtcttggaagaacaaaagagagcaaatgaatcaacaagaagagaaacctaaaagcatctcaagaaatctgcat 113  Q
    ||||||||||||| || ||   |||||||||||||||||||||||||||||||  || || ||| ||||| || |||||| ||||| |||||| |||| |    
T  27173422 cataggcaaagtttattaattcaataggtcttggaagaacaaaagagagcaaagaaaccatcaaaaagaggaatctaaaa-catctgaagaaaactgcgt 27173324  T
Q  114 ctgaag 119  Q
    ||||||    
T  27173323 ctgaag 27173318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 39 - 112
Target Start/End: Complemental strand, 49990641 - 49990569
Alignment:
Q  39 aggtcttggaagaacaaaagagagcaaatgaatcaacaagaagagaaacctaaaagcatctcaagaaatctgca 112  Q
    ||||||||||||||||| ||||||||||  | ||||||| ||||||| ||| ||||||||| ||||||||||||    
T  49990641 aggtcttggaagaacaatagagagcaaaaaattcaacaaaaagagaagcct-aaagcatctaaagaaatctgca 49990569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 91 - 186
Target Start/End: Complemental strand, 37412943 - 37412842
Alignment:
Q  91 aaagcatctcaagaaatctgcatctgaagtctaaagtgcgtctgaagccaaagtgcatc-----tgatgacgtcatcagaagcaaatc-cgtcagaagca 184  Q
    ||||| ||| |||||| ||||||||||||| | ||||||  |||||| |||||||| ||     |||||||||||||||||||||| | |||||||||||    
T  37412943 aaagcttctgaagaaaactgcatctgaagtttgaagtgctcctgaagacaaagtgcctctgaagtgatgacgtcatcagaagcaaagctcgtcagaagca 37412844  T
Q  185 ag 186  Q
    ||    
T  37412843 ag 37412842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 140 - 256
Target Start/End: Complemental strand, 51341301 - 51341186
Alignment:
Q  140 aaagtgcatctgatgacgtcatcagaagcaaatccgtcagaagcaagaccttcagaagccatttgttcagaagctgtataacatcagaatctgcaagttg 239  Q
    |||||||| ||||||||||||| |||||||| |   ||||||||||| |  |||||||| ||||  |||||||||||||| ||  |||| |||  ||||     
T  51341301 aaagtgcacctgatgacgtcattagaagcaagtttatcagaagcaagtctatcagaagctatttcatcagaagctgtatatcactagaaactg-tagttc 51341203  T
Q  240 atcagaagattcaacct 256  Q
    |||||||||| ||||||    
T  51341202 atcagaagatgcaacct 51341186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 14 - 72
Target Start/End: Complemental strand, 2246967 - 2246908
Alignment:
Q  14 cataggcaaagttgatcaacat-aataggtcttggaagaacaaaagagagcaaatgaatc 72  Q
    ||||||||||||| |||||  | |||||||||||||||||||| |||||||||| |||||    
T  2246967 cataggcaaagttaatcaatttcaataggtcttggaagaacaatagagagcaaaggaatc 2246908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 14 - 72
Target Start/End: Original strand, 13198876 - 13198935
Alignment:
Q  14 cataggcaaagttgatcaacat-aataggtcttggaagaacaaaagagagcaaatgaatc 72  Q
    ||||||||||||| |||||  | |||||||||||||||||||| |||||||||| |||||    
T  13198876 cataggcaaagttaatcaatttcaataggtcttggaagaacaatagagagcaaaggaatc 13198935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 14 - 72
Target Start/End: Original strand, 23680050 - 23680109
Alignment:
Q  14 cataggcaaagttgatcaacat-aataggtcttggaagaacaaaagagagcaaatgaatc 72  Q
    ||||||||||||| |||||  | |||||||||||||||||||| |||||||||| |||||    
T  23680050 cataggcaaagttaatcaatttcaataggtcttggaagaacaatagagagcaaaggaatc 23680109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 14 - 72
Target Start/End: Original strand, 24052287 - 24052346
Alignment:
Q  14 cataggcaaagttgatcaacat-aataggtcttggaagaacaaaagagagcaaatgaatc 72  Q
    ||||||||||||| |||||  | |||||||||||||||||||| |||||||||| |||||    
T  24052287 cataggcaaagttaatcaatttcaataggtcttggaagaacaatagagagcaaaggaatc 24052346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 92 - 169
Target Start/End: Complemental strand, 934149 - 934067
Alignment:
Q  92 aagcatctcaagaaatctgcatctgaagtctaaagtgcgtctgaagccaaagtgcatc-----tgatgacgtcatcagaagca 169  Q
    |||||||| |||||| |||| |||||||  |||||||| ||||||||  |||||||||     ||||||||||||||||||||    
T  934149 aagcatctgaagaaaactgcgtctgaagcttaaagtgcttctgaagctgaagtgcatctgaagtgatgacgtcatcagaagca 934067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 39 - 77
Target Start/End: Original strand, 20627269 - 20627307
Alignment:
Q  39 aggtcttggaagaacaaaagagagcaaatgaatcaacaa 77  Q
    ||||||||||||||||| |||||||||| ||||||||||    
T  20627269 aggtcttggaagaacaatagagagcaaaggaatcaacaa 20627307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 92 - 169
Target Start/End: Original strand, 29460927 - 29461008
Alignment:
Q  92 aagcatctcaagaaatctgcatctgaagtctaaagtgcgtctgaagccaaagtgcatc-----tgatgacgtcatcagaagca 169  Q
    |||||||| |||||| |||| ||||||| ||||||||| ||||||||  |||||||||     ||||||||||||||||||||    
T  29460927 aagcatctgaagaaaactgcgtctgaag-ctaaagtgcttctgaagctgaagtgcatctgaagtgatgacgtcatcagaagca 29461008  T

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Target: chr3; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 92 - 169
Target Start/End: Original strand, 29471779 - 29471860
Alignment:
Q  92 aagcatctcaagaaatctgcatctgaagtctaaagtgcgtctgaagccaaagtgcatc-----tgatgacgtcatcagaagca 169  Q
    |||||||| |||||| |||| ||||||| ||||||||| ||||||||  |||||||||     ||||||||||||||||||||    
T  29471779 aagcatctgaagaaaactgcgtctgaag-ctaaagtgcttctgaagctgaagtgcatctgaagtgatgacgtcatcagaagca 29471860  T

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Target: chr3; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 39 - 77
Target Start/End: Complemental strand, 47208079 - 47208041
Alignment:
Q  39 aggtcttggaagaacaaaagagagcaaatgaatcaacaa 77  Q
    |||| |||||||||||| |||||||||||||||||||||    
T  47208079 aggtattggaagaacaatagagagcaaatgaatcaacaa 47208041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 132 - 228
Target Start/End: Complemental strand, 49990539 - 49990446
Alignment:
Q  132 ctgaagccaaagtgcatctgatgacgtcatcagaagcaaatccgtcagaagcaagaccttcagaagccatttgttcagaagctgtataacatcagaa 228  Q
    |||||| |||| |||| |||||||||||||||||||||| |   | ||||||||| |  |||||||| ||||  |||||||||||||| || |||||    
T  49990539 ctgaagacaaaatgcacctgatgacgtcatcagaagcaagt---ttagaagcaagtctatcagaagctatttcatcagaagctgtatatcaccagaa 49990446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 240 - 332
Target Start/End: Complemental strand, 10529526 - 10529435
Alignment:
Q  240 atcagaagattcaacctgaagactctaagagctgtctattgaatttaacctcgtctaagagagagaaagactcaaaggaaggtgccaacgttc 332  Q
    |||||||||| |||||| |||  || || |||||  ||||| ||| ||||||||||| || || |||||||| ||||||| ||||||||||||    
T  10529526 atcagaagatgcaacctaaagtttcaaatagctggttattggattcaacctcgtctaggaaagcgaaagact-aaaggaaagtgccaacgttc 10529435  T

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Target: chr3; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 132 - 168
Target Start/End: Original strand, 11908864 - 11908900
Alignment:
Q  132 ctgaagccaaagtgcatctgatgacgtcatcagaagc 168  Q
    |||||| ||||||||| ||||||||||||||||||||    
T  11908864 ctgaagacaaagtgcacctgatgacgtcatcagaagc 11908900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 36 - 72
Target Start/End: Complemental strand, 14581708 - 14581672
Alignment:
Q  36 aataggtcttggaagaacaaaagagagcaaatgaatc 72  Q
    |||||||||||||||||||| |||||||||| |||||    
T  14581708 aataggtcttggaagaacaatagagagcaaaggaatc 14581672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 45 - 77
Target Start/End: Complemental strand, 14969677 - 14969645
Alignment:
Q  45 tggaagaacaaaagagagcaaatgaatcaacaa 77  Q
    |||||||||||| ||||||||||||||||||||    
T  14969677 tggaagaacaaacgagagcaaatgaatcaacaa 14969645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 45 - 77
Target Start/End: Complemental strand, 31303752 - 31303720
Alignment:
Q  45 tggaagaacaaaagagagcaaatgaatcaacaa 77  Q
    |||||||||||||||||||||| ||||||||||    
T  31303752 tggaagaacaaaagagagcaaaagaatcaacaa 31303720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 45 - 77
Target Start/End: Complemental strand, 41495337 - 41495305
Alignment:
Q  45 tggaagaacaaaagagagcaaatgaatcaacaa 77  Q
    |||||||||||||||||||||| ||||||||||    
T  41495337 tggaagaacaaaagagagcaaaggaatcaacaa 41495305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 41 - 77
Target Start/End: Original strand, 47405243 - 47405279
Alignment:
Q  41 gtcttggaagaacaaaagagagcaaatgaatcaacaa 77  Q
    ||||||||||||||| |||||||||| ||||||||||    
T  47405243 gtcttggaagaacaatagagagcaaaggaatcaacaa 47405279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 238; Significance: 1e-132; HSPs: 24)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 238; E-Value: 1e-132
Query Start/End: Original strand, 14 - 335
Target Start/End: Original strand, 21025177 - 21025498
Alignment:
Q  14 cataggcaaagttgatcaacataataggtcttggaagaacaaaagagagcaaatgaatcaacaagaagagaaacctaaaagcatctcaagaaatctgcat 113  Q
    ||||| |||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||| ||||||| |||||| | |||||||||||||    
T  21025177 catagacaaagttgatcaacataataggtcttggaacaacaaaagagagcaaaggaatcaacaagaagataaacctagaagcatatgaagaaatctgcat 21025276  T
Q  114 ctgaagtctaaagtgcgtctgaagccaaagtgcatctgatgacgtcatcagaagcaaatccgtcagaagcaagaccttcagaagccatttgttcagaagc 213  Q
     |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||| |||||||| ||||||||||||    
T  21025277 atgaagtctaaagtgcgtctgaagccaaaatgcatctgatgacgtcatcagaagcaaatccgtcaaaagcaagacctttagaagccaattgttcagaagc 21025376  T
Q  214 tgtataacatcagaatctgcaagttgatcagaagattcaacctgaagactctaagagctgtctattgaatttaacctcgtctaagagagagaaagactca 313  Q
    ||||||||||||||| ||||||||||||||||||||||||||||| |  |||||||||||||||||| ||| |||||||||||||| || |||||||| |    
T  21025377 tgtataacatcagaaactgcaagttgatcagaagattcaacctgatgtttctaagagctgtctattggattcaacctcgtctaagaaagcgaaagactaa 21025476  T
Q  314 aaggaaggtgccaacgttcatt 335  Q
    ||||||||||||||||||||||    
T  21025477 aaggaaggtgccaacgttcatt 21025498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 14 - 329
Target Start/End: Original strand, 24814270 - 24814595
Alignment:
Q  14 cataggcaaagttgatcaacat-aataggtcttggaagaacaaaagagagcaaatgaatcaacaagaagagaaacctaaaagcatctcaagaaatctgca 112  Q
    ||||| |||||||||||||  | ||||||||||||||||||||||||||||||| |||||||||| |||||||||||||| |||||| |||||||||||     
T  24814270 catagacaaagttgatcaaatttaataggtcttggaagaacaaaagagagcaaaggaatcaacaa-aagagaaacctaaa-gcatctgaagaaatctgct 24814367  T
Q  113 tctgaagtctaaagtgcgtctgaagccaaagtgcatctgatgacgtcatcagaagcaa----atccg--------tcagaagcaagaccttcagaagcca 200  Q
    ||||||||  |||||||  ||||||||||| ||||||||||||||||||||||||  |    ||| |        |||| |||||| |||||||||||||    
T  24814368 tctgaagttgaaagtgctcctgaagccaaaatgcatctgatgacgtcatcagaagtgagattatcagaagcaagttcagtagcaagtccttcagaagcca 24814467  T
Q  201 tttgttcagaagctgtataacatcagaatctgcaagttgatcagaagattcaacctgaagactctaagagctgtctattgaatttaacctcgtctaagag 300  Q
    |||| |||||||||||||| || ||||| ||| ||||| |||||||||| ||||||||||  || || |||||| ||||| ||| |||||| |||||||     
T  24814468 tttgatcagaagctgtatatcaccagaaactg-aagttcatcagaagatgcaacctgaagtttcaaatagctgtttattggattcaacctcttctaagat 24814566  T
Q  301 agagaaagactcaaaggaaggtgccaacg 329  Q
    || |||||||| || | |||||| |||||    
T  24814567 agcgaaagactaaaggaaaggtggcaacg 24814595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 35 - 311
Target Start/End: Original strand, 24793717 - 24794002
Alignment:
Q  35 taataggtcttggaagaacaaaagagagcaaatgaatcaacaagaagagaaacctaaaagcatctcaagaaatctgcatctgaagtctaaagtgcgtctg 134  Q
    |||||||||||||||||||||||||||||||| |||||||||| |||||||||||||| |||||| ||||||||||| ||||||||  |||||||  |||    
T  24793717 taataggtcttggaagaacaaaagagagcaaaggaatcaacaa-aagagaaacctaaa-gcatctgaagaaatctgcctctgaagttgaaagtgctcctg 24793814  T
Q  135 aagccaaagtgcatctgatgacgtcatcagaagcaa----atccg--------tcagaagcaagaccttcagaagccatttgttcagaagctgtataaca 222  Q
    |||||||| ||||||||||||||||||||||||  |    ||| |        |||| |||||| ||||||||||||||||| ||||||| |||||| ||    
T  24793815 aagccaaaatgcatctgatgacgtcatcagaagtgagattatcagaagcaagttcagtagcaagtccttcagaagccatttgatcagaagttgtatatca 24793914  T
Q  223 tcagaatctgcaagttgatcagaagattcaacctgaagactctaagagctgtctattgaatttaacctcgtctaagagagagaaagact 311  Q
     ||||| ||| ||||| |||||||||| ||||||||||  || || |||||| ||||| ||| |||||| | ||||| || ||||||||    
T  24793915 ccagaaactg-aagttcatcagaagatgcaacctgaagtttcaaatagctgtttattggattcaacctcttttaagatagcgaaagact 24794002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 14 - 119
Target Start/End: Original strand, 20646233 - 20646337
Alignment:
Q  14 cataggcaaagttgatcaacataataggtcttggaagaacaaaagagagcaaatgaatcaacaagaagagaaacctaaaagcatctcaagaaatctgcat 113  Q
    |||||||||||||||||||   ||||||||||||||||||||||||||||||| ||| || ||| ||||| ||||| ||||||||| |||||| |||| |    
T  20646233 cataggcaaagttgatcaattcaataggtcttggaagaacaaaagagagcaaaggaaccatcaataagaggaacct-aaagcatctgaagaaaactgcgt 20646331  T
Q  114 ctgaag 119  Q
    ||||||    
T  20646332 ctgaag 20646337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 14 - 92
Target Start/End: Original strand, 23392384 - 23392463
Alignment:
Q  14 cataggcaaagttgatcaa-cataataggtcttggaagaacaaaagagagcaaatgaatcaacaagaagagaaacctaaa 92  Q
    ||||| ||||||||||||| | |||||||||||||||||||||||||||||||| |||||||||| | ||||| ||||||    
T  23392384 catagacaaagttgatcaatcttaataggtcttggaagaacaaaagagagcaaaagaatcaacaaaaggagaagcctaaa 23392463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 14 - 120
Target Start/End: Complemental strand, 22755872 - 22755767
Alignment:
Q  14 cataggcaaagttgatcaacataataggtcttggaagaacaaaagagagcaaatgaatcaacaagaagagaaacctaaaagcatctcaagaaatctgcat 113  Q
    ||||| |||||||||||||  |||||||||||||||||||||| |||||||||  ||||| ||||||||  ||||| ||||||||| |||||| || | |    
T  22755872 catagacaaagttgatcaatttaataggtcttggaagaacaaacgagagcaaagaaatcatcaagaagaagaacct-aaagcatctgaagaaaactacgt 22755774  T
Q  114 ctgaagt 120  Q
    |||||||    
T  22755773 ctgaagt 22755767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 39 - 120
Target Start/End: Complemental strand, 1084426 - 1084346
Alignment:
Q  39 aggtcttggaagaacaaaagagagcaaatgaatcaacaagaagagaaacctaaaagcatctcaagaaatctgcatctgaagt 120  Q
    |||||||||||||||||||||||||||| |||||| ||||||||||| ||| ||||||||| ||||||  ||| ||||||||    
T  1084426 aggtcttggaagaacaaaagagagcaaaggaatcagcaagaagagaagcct-aaagcatctgaagaaaattgcctctgaagt 1084346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 14 - 111
Target Start/End: Original strand, 19312656 - 19312752
Alignment:
Q  14 cataggcaaagttgatcaacataataggtcttggaagaacaaaagagagcaaatgaatcaacaagaagagaaacctaaaagcatctcaagaaatctgc 111  Q
    ||||| ||||||||| |||   ||||||||||||||||||||||||||||||| ||| || ||||||||| ||||| ||||||||| |||||| ||||    
T  19312656 catagacaaagttgaccaattcaataggtcttggaagaacaaaagagagcaaaggaaccatcaagaagaggaacct-aaagcatctgaagaaaactgc 19312752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 235 - 331
Target Start/End: Original strand, 20646478 - 20646575
Alignment:
Q  235 agttgatcagaagattcaacctgaagactctaa-gagctgtctattgaatttaacctcgtctaagagagagaaagactcaaaggaaggtgccaacgtt 331  Q
    ||||||||||||||||||||||| ||  || || ||| ||||| ||| ||||||||||||||||||||| ||| |||| ||||| |||||||||||||    
T  20646478 agttgatcagaagattcaacctggagtttcaaaagagttgtcttttggatttaacctcgtctaagagagcgaaggactaaaagggaggtgccaacgtt 20646575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 36 - 119
Target Start/End: Original strand, 19297317 - 19297399
Alignment:
Q  36 aataggtcttggaagaacaaaagagagcaaatgaatcaacaagaagagaaacctaaaagcatctcaagaaatctgcatctgaag 119  Q
    ||||||||||||||||||||||||||||||| ||| || ||||||||| ||||| ||||||||| ||| || |||| |||||||    
T  19297317 aataggtcttggaagaacaaaagagagcaaaggaaccatcaagaagaggaacct-aaagcatctgaaggaaactgcgtctgaag 19297399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 266 - 335
Target Start/End: Original strand, 19299912 - 19299981
Alignment:
Q  266 aagagctgtctattgaatttaacctcgtctaagagagagaaagactcaaaggaaggtgccaacgttcatt 335  Q
    ||||| ||||| ||||||||||||||||||||||||| ||| ||   ||||| ||||| |||||||||||    
T  19299912 aagagttgtctcttgaatttaacctcgtctaagagagcgaaggatcaaaagggaggtgtcaacgttcatt 19299981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 266 - 302
Target Start/End: Original strand, 19312919 - 19312955
Alignment:
Q  266 aagagctgtctattgaatttaacctcgtctaagagag 302  Q
    ||||||||||| |||||||||||||||||||||||||    
T  19312919 aagagctgtctcttgaatttaacctcgtctaagagag 19312955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 14 - 72
Target Start/End: Original strand, 17968860 - 17968919
Alignment:
Q  14 cataggcaaagttgatcaacat-aataggtcttggaagaacaaaagagagcaaatgaatc 72  Q
    ||||||||||||| |||||  | |||||||||||||||||||| |||||||||| |||||    
T  17968860 cataggcaaagttaatcaatttcaataggtcttggaagaacaatagagagcaaaggaatc 17968919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 14 - 72
Target Start/End: Original strand, 19497660 - 19497719
Alignment:
Q  14 cataggcaaagttgatcaacat-aataggtcttggaagaacaaaagagagcaaatgaatc 72  Q
    ||||||||||||| |||||  | |||||||||||||||||||| |||||||||| |||||    
T  19497660 cataggcaaagttaatcaatttcaataggtcttggaagaacaatagagagcaaaggaatc 19497719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 14 - 72
Target Start/End: Complemental strand, 24275600 - 24275541
Alignment:
Q  14 cataggcaaagttgatcaacat-aataggtcttggaagaacaaaagagagcaaatgaatc 72  Q
    ||||||||||||| |||||  | |||||||||||||||||||| |||||||||| |||||    
T  24275600 cataggcaaagttaatcaatttcaataggtcttggaagaacaatagagagcaaaggaatc 24275541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 92 - 169
Target Start/End: Original strand, 18768638 - 18768720
Alignment:
Q  92 aagcatctcaagaaatctgcatctgaagtctaaagtgcgtctgaagccaaagtgcatc-----tgatgacgtcatcagaagca 169  Q
    |||||||| |||||| |||| |||||||  |||||||| ||||||||  |||||||||     ||||||||||||||||||||    
T  18768638 aagcatctgaagaaaactgcgtctgaagcttaaagtgcttctgaagctgaagtgcatctgaagtgatgacgtcatcagaagca 18768720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 92 - 169
Target Start/End: Original strand, 28721048 - 28721130
Alignment:
Q  92 aagcatctcaagaaatctgcatctgaagtctaaagtgcgtctgaagccaaagtgcatc-----tgatgacgtcatcagaagca 169  Q
    |||||||| |||||| |||| |||||||  |||||||| ||||||||  |||||||||     ||||||||||||||||||||    
T  28721048 aagcatctgaagaaaactgcgtctgaagcttaaagtgcttctgaagctgaagtgcatctggagtgatgacgtcatcagaagca 28721130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 92 - 169
Target Start/End: Original strand, 28731636 - 28731718
Alignment:
Q  92 aagcatctcaagaaatctgcatctgaagtctaaagtgcgtctgaagccaaagtgcatc-----tgatgacgtcatcagaagca 169  Q
    |||||||| |||||| |||| |||||||  |||||||| ||||||||  |||||||||     ||||||||||||||||||||    
T  28731636 aagcatctgaagaaaactgcgtctgaagcttaaagtgcttctgaagctgaagtgcatctggagtgatgacgtcatcagaagca 28731718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 36 - 77
Target Start/End: Original strand, 9015104 - 9015145
Alignment:
Q  36 aataggtcttggaagaacaaaagagagcaaatgaatcaacaa 77  Q
    |||||||  |||||||||||||||||||||| ||||||||||    
T  9015104 aataggttctggaagaacaaaagagagcaaaggaatcaacaa 9015145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 36 - 77
Target Start/End: Original strand, 13963743 - 13963784
Alignment:
Q  36 aataggtcttggaagaacaaaagagagcaaatgaatcaacaa 77  Q
    |||||||  |||||||||||||||||||||| ||||||||||    
T  13963743 aataggttctggaagaacaaaagagagcaaaggaatcaacaa 13963784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 38 - 82
Target Start/End: Complemental strand, 19540763 - 19540719
Alignment:
Q  38 taggtcttggaagaacaaaagagagcaaatgaatcaacaagaaga 82  Q
    ||||| |||||||||||||||||||| || |||||||||| ||||    
T  19540763 taggttttggaagaacaaaagagagctaaggaatcaacaaaaaga 19540719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 92 - 152
Target Start/End: Original strand, 21172181 - 21172241
Alignment:
Q  92 aagcatctcaagaaatctgcatctgaagtctaaagtgcgtctgaagccaaagtgcatctga 152  Q
    |||||||| |||||| |||| |||||||  |||||||| ||||||||  ||||||||||||    
T  21172181 aagcatctgaagaaaactgcgtctgaagcttaaagtgcttctgaagctgaagtgcatctga 21172241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 45 - 77
Target Start/End: Complemental strand, 25829462 - 25829430
Alignment:
Q  45 tggaagaacaaaagagagcaaatgaatcaacaa 77  Q
    |||||||||||||||||||||| ||||||||||    
T  25829462 tggaagaacaaaagagagcaaaggaatcaacaa 25829430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 45 - 77
Target Start/End: Complemental strand, 38781738 - 38781706
Alignment:
Q  45 tggaagaacaaaagagagcaaatgaatcaacaa 77  Q
    ||||||||||||||||||||| |||||||||||    
T  38781738 tggaagaacaaaagagagcaattgaatcaacaa 38781706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 224; Significance: 1e-123; HSPs: 34)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 224; E-Value: 1e-123
Query Start/End: Original strand, 14 - 335
Target Start/End: Complemental strand, 23065341 - 23065035
Alignment:
Q  14 cataggcaaagttgatcaacataataggtcttggaagaacaaaagagagcaaatgaatcaacaagaagagaaacctaaaagcatctcaagaaatctgcat 113  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||| |||||||| ||||    
T  23065341 catagacaaagttgatcaacataataggtcttggaagaacaaaagagagcaaaggaatcaacaagaagagaaacctagaagcatctgaagaaatcagcat 23065242  T
Q  114 ctgaagtctaaagtgcgtctgaagccaaagtgcatctgatgacgtcatcagaagcaaatccgtcagaagcaagaccttcagaagccatttgttcagaagc 213  Q
    ||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||               ||||||||||||||||||||||||||||    
T  23065241 ctgaagtctaaagtgcgtctgaagccaaaatgcatctaatgacgtcatcagaagcaa---------------gaccttcagaagccatttgttcagaagc 23065157  T
Q  214 tgtataacatcagaatctgcaagttgatcagaagattcaacctgaagactctaagagctgtctattgaatttaacctcgtctaagagagagaaagactca 313  Q
    ||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||| |    
T  23065156 tgtataacatcagaaactgcaagttgattagaagattcaacctgaagactctaagagctgtctattggatttaacctcgtctaagagagcgaaagactaa 23065057  T
Q  314 aaggaaggtgccaacgttcatt 335  Q
    ||||||||||||||||||||||    
T  23065056 aaggaaggtgccaacgttcatt 23065035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 208; E-Value: 1e-114
Query Start/End: Original strand, 22 - 335
Target Start/End: Complemental strand, 19038391 - 19038093
Alignment:
Q  22 aagttgatcaacataataggtcttggaagaacaaaagagagcaaatgaatcaacaagaagagaaacctaaaagcatctcaagaaatctgcatctgaagtc 121  Q
    |||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||| |||||| | |||||||| |||||| |||||    
T  19038391 aagttgatcaacataataggtcttggaagaacaaaagaaagcaaaggaatcaacaagaagagaaacctagaagcatatgaagaaatcagcatctaaagtc 19038292  T
Q  122 taaagtgcgtctgaagccaaagtgcatctgatgacgtcatcagaagcaaatccgtcagaagcaagaccttcagaagccatttgttcagaagctgtataac 221  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||                |||||||||||||||||||||||||||||||||||    
T  19038291 taaagtgcgtctgaagccaaaatgcatctgatgacgtcatcagaagcaat---------------accttcagaagccatttgttcagaagctgtataac 19038207  T
Q  222 atcagaatctgcaagttgatcagaagattcaacctgaagactctaagagctgtctattgaatttaacctcgtctaagagagagaaagactcaaaggaagg 321  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||| ||||||||||| |||||||| |||||||||    
T  19038206 atcagaatctgcaagttgatcagaatattcaacctgaagactctaagagctgtctattggatttaaccttgtctaagagagcgaaagactaaaaggaagg 19038107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 186; E-Value: 1e-101
Query Start/End: Original strand, 14 - 323
Target Start/End: Complemental strand, 22019743 - 22019435
Alignment:
Q  14 cataggcaaagttgatcaacataataggtcttggaagaacaaaagagagcaaatgaatcaacaagaagagaaacctaaaagcatctcaagaaatctgcat 113  Q
    ||||| |||||||||||||  |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||| |    
T  22019743 catagacaaagttgatcaatttaataggtcttggaagaacaaaagagagcaaaggaatcaacaagaagagaaacctaaaagcatctgaagaaatctgcct 22019644  T
Q  114 ctgaagtctaaagtgcgtctgaagccaaagtgcatctgatgacgtcatcagaagcaaatccgtcagaagcaagaccttcagaagccatttgttcagaagc 213  Q
    |||||||  |||| || |||||||||||| ||||||||||||||||||||||||| ||||  ||||||||||||||||||||||||| ||||||||||||    
T  22019643 ctgaagttgaaagggcttctgaagccaaaatgcatctgatgacgtcatcagaagcgaatctatcagaagcaagaccttcagaagccaattgttcagaagc 22019544  T
Q  214 tgtataacatcagaatctgcaagttgatcagaagattcaacctgaagactctaagagctgtctattgaatttaacctcgtctaagagagagaaagactca 313  Q
    | |||| || |||||  || |||||||||||||||||||||||||||  || || |||||||||||||||| |||||||||||||| || |||||||| |    
T  22019543 tatatatcaccagaaattg-aagttgatcagaagattcaacctgaagtttcaaatagctgtctattgaattcaacctcgtctaagaaagcgaaagactaa 22019445  T
Q  314 aaggaaggtg 323  Q
    | ||||||||    
T  22019444 agggaaggtg 22019435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 164; E-Value: 1e-87
Query Start/End: Original strand, 14 - 332
Target Start/End: Complemental strand, 28380401 - 28380083
Alignment:
Q  14 cataggcaaagttgatcaacataataggtcttggaagaacaaaagagagcaaatgaatcaacaagaagagaaacctaaaagcatctcaagaaatctgcat 113  Q
    ||||| |||| ||||||||  ||||||||||| |||||||||||||||||||| ||||||||||||||||||||||| |||||||| ||||||||||| |    
T  28380401 catagacaaacttgatcaatttaataggtcttagaagaacaaaagagagcaaaggaatcaacaagaagagaaacctagaagcatctgaagaaatctgcct 28380302  T
Q  114 ctgaagtctaaagtgcgtctgaagccaaagtgcatctgatgacgtcatcagaagcaaatccgtcagaagcaagaccttcagaagccatttgttcagaagc 213  Q
    |||||||  |||||||||||||||||| | ||||||||||||||||||||||||||||||  ||| ||||||||||||||||||||| ||||| |||||     
T  28380301 ctgaagttgaaagtgcgtctgaagccagaatgcatctgatgacgtcatcagaagcaaatctatcataagcaagaccttcagaagccaattgtttagaagt 28380202  T
Q  214 tgtat-aacatcagaatctgcaagttgatcagaagattcaacctgaagactctaagagctgtctattgaatttaacctcgtctaagagagagaaagactc 312  Q
    | ||| |||| ||||| ||| ||||||||||| |||||||| ||||||  || || |||||||||||| ||| |||||||||||||| || ||||||||     
T  28380201 tatataaacaccagaaactg-aagttgatcaggagattcaatctgaagtttcaaacagctgtctattggattcaacctcgtctaagaaagcgaaagacta 28380103  T
Q  313 aaaggaaggtgccaacgttc 332  Q
    || |||| ||||||||||||    
T  28380102 aagggaatgtgccaacgttc 28380083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 155; E-Value: 3e-82
Query Start/End: Original strand, 63 - 335
Target Start/End: Complemental strand, 5930046 - 5929789
Alignment:
Q  63 caaatgaatcaacaagaagagaaacctaaaagcatctcaagaaatctgcatctgaagtctaaagtgcgtctgaagccaaagtgcatctgatgacgtcatc 162  Q
    |||| ||||||||||||||||||||||| |||||||| |||||||||||||||||||| |||||||||||||||| |||||||||||||||||| |||||    
T  5930046 caaaggaatcaacaagaagagaaacctagaagcatctgaagaaatctgcatctgaagtttaaagtgcgtctgaaggcaaagtgcatctgatgacatcatc 5929947  T
Q  163 agaagcaaatccgtcagaagcaagaccttcagaagccatttgttcagaagctgtataacatcagaatctgcaagttgatcagaagattcaacctgaagac 262  Q
    ||||||||               |||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||    
T  5929946 agaagcaa---------------gaccttcagaagccatttgttcagaagctgtacaacatcagaatctgcaagttgataagaagattcaacctgaagac 5929862  T
Q  263 tctaagagctgtctattgaatttaacctcgtctaagagagagaaagactcaaaggaaggtgccaacgttcatt 335  Q
    |||||||| ||||||||| |||||| ||||||||||||||  ||||||  | ||||||| |||||||||||||    
T  5929861 tctaagagttgtctattggatttaaactcgtctaagagagcaaaagacaaagaggaaggcgccaacgttcatt 5929789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 155; E-Value: 3e-82
Query Start/End: Original strand, 68 - 278
Target Start/End: Complemental strand, 20255419 - 20255209
Alignment:
Q  68 gaatcaacaagaagagaaacctaaaagcatctcaagaaatctgcatctgaagtctaaagtgcgtctgaagccaaagtgcatctgatgacgtcatcagaag 167  Q
    ||||||||||||||||||||||| |||||||| ||||||||||| ||||||||  |||||||||||||||||||| ||||||||||||||||||||||||    
T  20255419 gaatcaacaagaagagaaacctagaagcatctgaagaaatctgcctctgaagttgaaagtgcgtctgaagccaaaatgcatctgatgacgtcatcagaag 20255320  T
Q  168 caaatccgtcagaagcaagaccttcagaagccatttgttcagaagctgtataacatcagaatctgcaagttgatcagaagattcaacctgaagactctaa 267  Q
    ||||||| ||||||||||||||||||||||||| ||||||||||||||||||||| ||||| |||||||||||||||||||||||| |||||| || |||    
T  20255319 caaatccttcagaagcaagaccttcagaagccaattgttcagaagctgtataacaccagaaactgcaagttgatcagaagattcaatctgaagtctttaa 20255220  T
Q  268 gagctgtctat 278  Q
    ||| |||||||    
T  20255219 gagttgtctat 20255209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 152; E-Value: 2e-80
Query Start/End: Original strand, 14 - 323
Target Start/End: Original strand, 26547929 - 26548238
Alignment:
Q  14 cataggcaaagttgatcaacat-aataggtcttggaagaacaaaagagagcaaatgaatcaacaagaagagaaacctaaaagcatctcaagaaatctgca 112  Q
    ||||| |||||||||||||  | ||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||| |||||||||||     
T  26547929 catagacaaagttgatcaaatttaataggtcttggaagaacaaaagagagcaaaggaatcaacaagaagagaaacct-aaagcatctgaagaaatctgcc 26548027  T
Q  113 tctgaagtctaaagtgcgtctgaagccaaagtgcatctgatgacgtcatcagaagcaaatccgtcagaagcaagaccttcagaagcc-atttgttcagaa 211  Q
    ||||||||  ||||||| |||||||||||| |||||||| |||||||||||||||  | |   |||||||||||||||||||||||| ||||| ||||||    
T  26548028 tctgaagttgaaagtgcttctgaagccaaaatgcatctgctgacgtcatcagaagtgagtttatcagaagcaagaccttcagaagccaatttgatcagaa 26548127  T
Q  212 gctgtataacatcagaatctgcaagttgatcagaagattcaacctgaagactctaagagctgtctattgaatttaacctcgtctaagagagagaaagact 311  Q
    ||||||||||| ||||| ||| |||||||| |||||||||||||  |||  || || |||||||||||| ||| |||||||||||||| || ||||||||    
T  26548128 gctgtataacaccagaaactg-aagttgataagaagattcaaccgaaagtttcaaatagctgtctattggattcaacctcgtctaagaaagcgaaagact 26548226  T
Q  312 caaaggaaggtg 323  Q
     |||||||||||    
T  26548227 aaaaggaaggtg 26548238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 141; E-Value: 7e-74
Query Start/End: Original strand, 14 - 335
Target Start/End: Complemental strand, 44201384 - 44201098
Alignment:
Q  14 cataggcaaagttgatcaacataataggtcttggaagaacaaaagagagcaaatgaatcaacaagaagagaaacctaaaagcatctcaagaaatctgcat 113  Q
    ||||| |||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||   |||||||| ||||||||                  
T  44201384 catagacaaagttgatcaac-taataggtcttggaagaacaaaagagaggaaatgaatcaacaaga---gaaacctagaagcatct-------------- 44201303  T
Q  114 ctgaagtctaaagtgcgtctgaagccaaagtgcatctgatgacgtcatcagaagcaaatccgtcagaagcaagaccttcagaagccatttgttcagaagc 213  Q
      ||||| |||||||||||||||||||||||||||||||||||||||||||||||||               ||||||||||||||||||||||||||||    
T  44201302 --gaagtttaaagtgcgtctgaagccaaagtgcatctgatgacgtcatcagaagcaa---------------gaccttcagaagccatttgttcagaagc 44201220  T
Q  214 tgtataacatcagaatctgcaagttgatcagaagattcaacctgaagactctaagagctgtctattgaatttaacctcgtctaagagagagaaagactca 313  Q
    |||| ||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||| |||||| |||||||||||||| |||||||  |    
T  44201219 tgtacaacatcagaatctgcaagttgataagaagattcaacctgaagactctaagagttgtctattggatttaaactcgtctaagagagcgaaagacaaa 44201120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 14 - 311
Target Start/End: Complemental strand, 22655886 - 22655588
Alignment:
Q  14 cataggcaaagttgatcaacat-aataggtcttggaagaacaaaagagagcaaatgaatcaacaagaagagaaacctaaaagcatctcaagaaatctgca 112  Q
    ||||| |||||||||||||  | ||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||| | |||||||||||     
T  22655886 catagacaaagttgatcaaatttaataggtcttggaagaacaaaagagagcaaaggaatcaacaagaagagaaacct-aaagcatttgaagaaatctgcc 22655788  T
Q  113 tctgaagtctaaagtgcgtctgaagccaaagtgcatctgatgacgtcatcagaagcaaatccgtcagaagcaagaccttcagaagcc-atttgttcagaa 211  Q
    | ||||||  | |||||  ||||||||||| ||||||||||||||||||||||||  | |   | ||||||||| |||||||||||| ||||| ||||||    
T  22655787 tatgaagttgagagtgctcctgaagccaaaatgcatctgatgacgtcatcagaagtgagtttattagaagcaagtccttcagaagccaatttgatcagaa 22655688  T
Q  212 gctgtataacatc-agaatctgcaagttgatcagaagattcaacctgaagactctaagagctgtctattgaatttaacctcgtctaagagagagaaagac 310  Q
    |||||||| || | |||| ||| |||||||||||||||||||||||||||  || || |||||||||||| ||| |||||||||||||| || |||||||    
T  22655687 gctgtatatcaccaagaaactg-aagttgatcagaagattcaacctgaagtttcaaatagctgtctattggattcaacctcgtctaagaaagcgaaagac 22655589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 14 - 329
Target Start/End: Complemental strand, 22643304 - 22642988
Alignment:
Q  14 cataggcaaagttgatcaacat-aataggtcttggaagaacaaaagagagcaaatgaatcaacaagaagagaaacctaaaagcatctcaagaaatctgca 112  Q
    ||||| |||||||||||||  | |||||||||||||||||||||||| |||||| ||||||| |||||||||||||| ||||||||| |||||||| ||     
T  22643304 catagacaaagttgatcaaatttaataggtcttggaagaacaaaagaaagcaaaggaatcaaaaagaagagaaacct-aaagcatctgaagaaatcggcc 22643206  T
Q  113 tctgaagtctaaagtgcgtctgaagccaaagtgcatctgatgacgtcatcagaagcaaatccgtcagaagcaagaccttcagaagcc-atttgttcagaa 211  Q
    ||||||||  |||||||  ||||||||||| |||||||||||||||||||| |||  | |   ||||||||||| |||||||||||| || || ||||||    
T  22643205 tctgaagttgaaagtgctcctgaagccaaaatgcatctgatgacgtcatcaaaagtgagtttatcagaagcaagtccttcagaagccaatatgatcagaa 22643106  T
Q  212 gctgtataacatc-agaatctgcaagttgatcagaagattcaacctgaagactctaagagctgtctattgaatttaacctcgtctaagagagagaaagac 310  Q
    |||||||| || | ||||  || |||||||||||||||||||||||||||  || || || ||||||||| ||| |||||||||||||| || |||||||    
T  22643105 gctgtatatcaccaagaaattg-aagttgatcagaagattcaacctgaagtttcaaatagttgtctattggattcaacctcgtctaagaaagcgaaagac 22643007  T
Q  311 tcaaaggaaggtgccaacg 329  Q
    | || | |||||| |||||    
T  22643006 taaaggaaaggtggcaacg 22642988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 235 - 335
Target Start/End: Complemental strand, 28474413 - 28474313
Alignment:
Q  235 agttgatcagaagattcaacctgaagactctaagagctgtctattgaatttaacctcgtctaagagagagaaagactcaaaggaaggtgccaacgttcat 334  Q
    ||||||||||||||||||| ||||||  || ||  ||||| ||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  28474413 agttgatcagaagattcaatctgaagtttcaaatggctgtttattggatttaacctcgtctaagagagcgaaagactcaaaggaaggtgccaacgttcat 28474314  T
Q  335 t 335  Q
    |    
T  28474313 t 28474313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 176 - 333
Target Start/End: Original strand, 52350520 - 52350678
Alignment:
Q  176 tcagaagcaagaccttcagaagccatttgttcagaagctgtataa-catcagaatctgcaagttgatcagaagattcaacctgaagactctaagagctgt 274  Q
    ||||||||||||||||||||||| | ||||||||||||| || || |||||||| ||| ||||||||||| ||||| |||||||||  || || ||||||    
T  52350520 tcagaagcaagaccttcagaagctaattgttcagaagctatacaaacatcagaaactg-aagttgatcaggagatttaacctgaagtttcaaatagctgt 52350618  T
Q  275 ctattgaatttaacctcgtctaagagagagaaagactcaaa-ggaaggtgccaacgttca 333  Q
    ||| || ||| |||||| ||||||| || |||||||| ||| ||||||||||||||||||    
T  52350619 ctagtggattcaacctcatctaagaaagcgaaagactaaaagggaaggtgccaacgttca 52350678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 14 - 99
Target Start/End: Original strand, 52350393 - 52350478
Alignment:
Q  14 cataggcaaagttgatcaacataataggtcttggaagaacaaaagagagcaaatgaatcaacaagaagagaaacctaaaagcatct 99  Q
    ||||| |||||||||||||  |||||||||||||||||||||||||||||||| ||||||||  ||||||||||||| ||||||||    
T  52350393 catagacaaagttgatcaatttaataggtcttggaagaacaaaagagagcaaaggaatcaacgtgaagagaaacctagaagcatct 52350478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 14 - 92
Target Start/End: Complemental strand, 28474626 - 28474548
Alignment:
Q  14 cataggcaaagttgatcaacataataggtcttggaagaacaaaagagagcaaatgaatcaacaagaagagaaacctaaa 92  Q
    |||||||||||||||||||  ||||||||||||||||||||||||||||||||  ||||| ||||||||| ||||||||    
T  28474626 cataggcaaagttgatcaatttaataggtcttggaagaacaaaagagagcaaagaaatcatcaagaagaggaacctaaa 28474548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 14 - 119
Target Start/End: Original strand, 45070317 - 45070421
Alignment:
Q  14 cataggcaaagttgatcaacataataggtcttggaagaacaaaagagagcaaatgaatcaacaagaagagaaacctaaaagcatctcaagaaatctgcat 113  Q
    ||||||||| ||| |||||   ||||||||||||||||||||||||||||||| ||| || ||||||||| ||||| ||||||||| |||||| |||| |    
T  45070317 cataggcaatgttaatcaattcaataggtcttggaagaacaaaagagagcaaaggaaccatcaagaagaggaacct-aaagcatctgaagaaaactgcgt 45070415  T
Q  114 ctgaag 119  Q
    ||||||    
T  45070416 ctgaag 45070421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 38 - 99
Target Start/End: Original strand, 19170054 - 19170115
Alignment:
Q  38 taggtcttggaagaacaaaagagagcaaatgaatcaacaagaagagaaacctaaaagcatct 99  Q
    ||||||||||||||||||||||||||||| |||||||||| ||||||| ||| |||||||||    
T  19170054 taggtcttggaagaacaaaagagagcaaaggaatcaacaaaaagagaagccttaaagcatct 19170115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 234 - 335
Target Start/End: Original strand, 45070547 - 45070649
Alignment:
Q  234 aagttgatcagaagattcaacctgaagactctaa-gagctgtctattgaatttaacctcgtctaagagagagaaagactcaaa-ggaaggtgccaacgtt 331  Q
    |||||| ||||||||||||| |||||  ||| || ||||||||| ||||| ||||||||||||||||||| |||||| ||||| || |||||||||||||    
T  45070547 aagttgttcagaagattcaatctgaaatctcaaaagagctgtctcttgaagttaacctcgtctaagagagcgaaaga-tcaaatgggaggtgccaacgtt 45070645  T
Q  332 catt 335  Q
    ||||    
T  45070646 catt 45070649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 39 - 77
Target Start/End: Original strand, 22599892 - 22599930
Alignment:
Q  39 aggtcttggaagaacaaaagagagcaaatgaatcaacaa 77  Q
    |||| ||||||||||||||||||||||||||||||||||    
T  22599892 aggttttggaagaacaaaagagagcaaatgaatcaacaa 22599930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 14 - 72
Target Start/End: Original strand, 22609671 - 22609729
Alignment:
Q  14 cataggcaaagttgatcaacataataggtcttggaagaacaaaagagagcaaatgaatc 72  Q
    ||||||||||||| |||||   |||||||||||||||||||| |||||||||| |||||    
T  22609671 cataggcaaagttaatcaattcaataggtcttggaagaacaatagagagcaaaggaatc 22609729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 36 - 77
Target Start/End: Complemental strand, 22154246 - 22154205
Alignment:
Q  36 aataggtcttggaagaacaaaagagagcaaatgaatcaacaa 77  Q
    |||||||  |||||||||||||||||||||||||||||||||    
T  22154246 aataggttctggaagaacaaaagagagcaaatgaatcaacaa 22154205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 273 - 332
Target Start/End: Complemental strand, 20251921 - 20251862
Alignment:
Q  273 gtctattgaatttaacctcgtctaagagagagaaagactcaaaggaaggtgccaacgttc 332  Q
    |||||| | ||| |||||||||||||| || |||||||| || |||||||||||||||||    
T  20251921 gtctatgggattcaacctcgtctaagaaagcgaaagactaaagggaaggtgccaacgttc 20251862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 14 - 72
Target Start/End: Complemental strand, 20799468 - 20799409
Alignment:
Q  14 cataggcaaagttgatcaacat-aataggtcttggaagaacaaaagagagcaaatgaatc 72  Q
    ||||||||||||| |||||  | |||||||||||||||||||| |||||||||| |||||    
T  20799468 cataggcaaagttaatcaatttcaataggtcttggaagaacaatagagagcaaaggaatc 20799409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 92 - 169
Target Start/End: Original strand, 147971 - 148052
Alignment:
Q  92 aagcatctcaagaaatctgcatctgaagtctaaagtgcgtctgaagccaaagtgcatc-----tgatgacgtcatcagaagca 169  Q
    |||||||| |||||| |||| ||||||| ||||||||| ||||||||  |||||||||     ||||||||||||||||||||    
T  147971 aagcatctgaagaaaactgcgtctgaag-ctaaagtgcttctgaagctgaagtgcatctgaagtgatgacgtcatcagaagca 148052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 92 - 169
Target Start/End: Original strand, 154046 - 154127
Alignment:
Q  92 aagcatctcaagaaatctgcatctgaagtctaaagtgcgtctgaagccaaagtgcatc-----tgatgacgtcatcagaagca 169  Q
    |||||||| |||||| |||| ||||||| ||||||||| ||||||||  |||||||||     ||||||||||||||||||||    
T  154046 aagcatctgaagaaaactgcgtctgaag-ctaaagtgcttctgaagctgaagtgcatctgaagtgatgacgtcatcagaagca 154127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 92 - 169
Target Start/End: Complemental strand, 5974214 - 5974133
Alignment:
Q  92 aagcatctcaagaaatctgcatctgaagtctaaagtgcgtctgaagccaaagtgcatctga-----tgacgtcatcagaagca 169  Q
    |||||||| |||||| |||| ||||||| ||||||||| ||||||||  ||||||||||||     |||||||||||||||||    
T  5974214 aagcatctgaagaaaactgcgtctgaag-ctaaagtgcttctgaagctgaagtgcatctgaagtgatgacgtcatcagaagca 5974133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 39 - 77
Target Start/End: Original strand, 25448243 - 25448281
Alignment:
Q  39 aggtcttggaagaacaaaagagagcaaatgaatcaacaa 77  Q
    ||||||||||||||||| |||||||||| ||||||||||    
T  25448243 aggtcttggaagaacaatagagagcaaaggaatcaacaa 25448281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 14 - 66
Target Start/End: Original strand, 14387803 - 14387856
Alignment:
Q  14 cataggcaaagttgatcaacat-aataggtcttggaagaacaaaagagagcaaa 66  Q
    ||||||||||||| |||||  | |||||||||||||||||||| ||||||||||    
T  14387803 cataggcaaagttaatcaatttcaataggtcttggaagaacaatagagagcaaa 14387856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 14 - 66
Target Start/End: Original strand, 20883558 - 20883611
Alignment:
Q  14 cataggcaaagttgatcaacat-aataggtcttggaagaacaaaagagagcaaa 66  Q
    ||||||||||||| |||||  | |||||||||||||||||||| ||||||||||    
T  20883558 cataggcaaagttaatcaatttcaataggtcttggaagaacaatagagagcaaa 20883611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 14 - 66
Target Start/End: Original strand, 46180573 - 46180626
Alignment:
Q  14 cataggcaaagttgatcaacat-aataggtcttggaagaacaaaagagagcaaa 66  Q
    ||||||||||||| |||||  | |||||||||||||||||||| ||||||||||    
T  46180573 cataggcaaagttaatcaatttcaataggtcttggaagaacaatagagagcaaa 46180626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 36 - 72
Target Start/End: Complemental strand, 675951 - 675915
Alignment:
Q  36 aataggtcttggaagaacaaaagagagcaaatgaatc 72  Q
    |||||||||||||||||||| |||||||||| |||||    
T  675951 aataggtcttggaagaacaatagagagcaaaggaatc 675915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 45 - 77
Target Start/End: Complemental strand, 1900696 - 1900664
Alignment:
Q  45 tggaagaacaaaagagagcaaatgaatcaacaa 77  Q
    |||||||||||||||||||||| ||||||||||    
T  1900696 tggaagaacaaaagagagcaaaggaatcaacaa 1900664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 45 - 73
Target Start/End: Complemental strand, 2268891 - 2268863
Alignment:
Q  45 tggaagaacaaaagagagcaaatgaatca 73  Q
    |||||||||||||||||||||||||||||    
T  2268891 tggaagaacaaaagagagcaaatgaatca 2268863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 40 - 186
Target Start/End: Original strand, 34255221 - 34255372
Alignment:
Q  40 ggtcttggaagaacaaa-agagagcaaatgaatcaacaagaagagaaacctaaaagcatctcaagaaatctgcatctgaagtctaaagtgcgtctgaagc 138  Q
    ||||||||||||||||| | |||||| ||  |||||||| ||| ||| | |||| || ||| |||||| |||| ||| |||| | ||||||  ||||||     
T  34255221 ggtcttggaagaacaaataaagagcatatacatcaacaaaaagggaagcttaaa-gcctctgaagaaaactgcgtctaaagtttgaagtgctcctgaaga 34255319  T
Q  139 caaagtgcatctga-----tgacgtcatcagaagcaaatccgtcagaagcaag 186  Q
    |||||||| |||||     |||||||||||||||||| | | |||||||||||    
T  34255320 caaagtgcctctgaagtaatgacgtcatcagaagcaagttcatcagaagcaag 34255372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 45 - 77
Target Start/End: Complemental strand, 36134537 - 36134505
Alignment:
Q  45 tggaagaacaaaagagagcaaatgaatcaacaa 77  Q
    |||||||||||||||||||||| ||||||||||    
T  36134537 tggaagaacaaaagagagcaaaggaatcaacaa 36134505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 195; Significance: 1e-106; HSPs: 32)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 21 - 331
Target Start/End: Original strand, 36209775 - 36210084
Alignment:
Q  21 aaagttgatcaacataataggtcttggaagaacaaaagagagcaaatgaatcaacaagaagagaaacctaaaagcatctcaagaaatctgcatctgaagt 120  Q
    ||||||||||||  ||||||||||||||||||||||||||||| || ||||||||||||||||||||||| |||| ||| ||||||||||| ||||||||    
T  36209775 aaagttgatcaatttaataggtcttggaagaacaaaagagagctaaggaatcaacaagaagagaaacctagaagcgtctgaagaaatctgcctctgaagt 36209874  T
Q  121 ctaaagtgcgtctgaagccaaagtgcatctgatgacgtcatcagaagcaaatccgtcagaagcaagaccttcagaagccatttgttcagaagctgtataa 220  Q
      |||||||||||||||| ||| ||||||||||||||||||||||||||||||  |||||||||||||||||||||||||  ||||||||||||||||||    
T  36209875 tgaaagtgcgtctgaagctaaaatgcatctgatgacgtcatcagaagcaaatctatcagaagcaagaccttcagaagccaactgttcagaagctgtataa 36209974  T
Q  221 catcagaatctgcaagttgatcagaagattcaacctgaagactctaagagctgtctattgaatttaacctcgtctaagagagagaaagactcaaaggaag 320  Q
    || ||||| ||| ||||||||||||||||||||||||||| ||| || || ||||||||| |||||||||||||||||| || |||||||| || |||||    
T  36209975 caccagaaactg-aagttgatcagaagattcaacctgaagtctcaaatagttgtctattggatttaacctcgtctaagaaagcgaaagactaaagggaag 36210073  T
Q  321 gtgccaacgtt 331  Q
    |||||||||||    
T  36210074 gtgccaacgtt 36210084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 184; E-Value: 1e-99
Query Start/End: Original strand, 14 - 335
Target Start/End: Original strand, 14778116 - 14778422
Alignment:
Q  14 cataggcaaagttgatcaacataataggtcttggaagaacaaaagagagcaaatgaatcaacaagaagagaaacctaaaagcatctcaagaaatctgcat 113  Q
    ||||| |||||||||||||  ||||||||||| ||| |||||||||||||||| ||||||||  ||||||||||||| |||||||| ||||||||  |||    
T  14778116 catagacaaagttgatcaatttaataggtcttagaaaaacaaaagagagcaaaggaatcaacgtgaagagaaacctagaagcatctgaagaaatcaacat 14778215  T
Q  114 ctgaagtctaaagtgcgtctgaagccaaagtgcatctgatgacgtcatcagaagcaaatccgtcagaagcaagaccttcagaagccatttgttcagaagc 213  Q
    ||||||||||||||||||||||||||||| ||||| |||||||||||||| |||||||||||||||               |||||||||| ||||||||    
T  14778216 ctgaagtctaaagtgcgtctgaagccaaaatgcatatgatgacgtcatcaaaagcaaatccgtcag---------------aagccatttgctcagaagc 14778300  T
Q  214 tgtataacatcagaatctgcaagttgatcagaagattcaacctgaagactctaagagctgtctattgaatttaacctcgtctaagagagagaaagactca 313  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||| ||| |||||||| |    
T  14778301 tgtataacatcagaaactgcaagttgatcagaagattcaacctgaagactctaagagctgtctattggatttaacctcgtttaagggagcgaaagactaa 14778400  T
Q  314 aaggaaggtgccaacgttcatt 335  Q
    ||||||||||||||||||||||    
T  14778401 aaggaaggtgccaacgttcatt 14778422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 109; E-Value: 8e-55
Query Start/End: Original strand, 35 - 329
Target Start/End: Complemental strand, 33378803 - 33378499
Alignment:
Q  35 taataggtcttggaagaacaaaagagagcaaatgaatcaacaagaagagaaacctaaaagcatctcaagaaatctgcatctgaagtctaaagtgcgtctg 134  Q
    |||||||||||||||||||||||||||||||| |||||||||| ||||||||||| ||||||||| ||||||||||| ||||||||  |||||||  |||    
T  33378803 taataggtcttggaagaacaaaagagagcaaaggaatcaacaaaaagagaaacct-aaagcatctaaagaaatctgcctctgaagttgaaagtgctcctg 33378705  T
Q  135 aagccaaagtgcatctgatgacgtcatcagaagcaa----atccg--------tcagaagcaagaccttcagaagccatttgttcagaagctgtataaca 222  Q
    |||||||| || |||||||||||||||||||||  |    ||| |        |||  |||||| ||||||||||||||||| |||||||||||||| ||    
T  33378704 aagccaaaatgtatctgatgacgtcatcagaagtgagattatcagaagcaagttcaatagcaagtccttcagaagccatttgatcagaagctgtatatca 33378605  T
Q  223 tcagaatctgcaagttgatcagaagattcaacctgaagactctaagagctgtctattgaatttaacctcgtctaagagagagaaagactcaaaggaaggt 322  Q
     ||||| ||| ||||| |||||||||| ||||||||||  || || |||||||||||| ||| |||||||||||||| || |||||||| || | |||||    
T  33378604 ccagaaactg-aagttcatcagaagatgcaacctgaagtttcaaatagctgtctattggattcaacctcgtctaagaaagcgaaagactaaaggaaaggt 33378506  T
Q  323 gccaacg 329  Q
    | |||||    
T  33378505 ggcaacg 33378499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 176 - 333
Target Start/End: Original strand, 17993613 - 17993771
Alignment:
Q  176 tcagaagcaagaccttcagaagccatttgttcagaagctgtataa-catcagaatctgcaagttgatcagaagattcaacctgaagactctaagagctgt 274  Q
    ||||||||||||||||||||||| | ||||||||||||| || || |||||||| ||| ||||||||||| ||||| |||||||||  || || ||||||    
T  17993613 tcagaagcaagaccttcagaagctaattgttcagaagctatacaaacatcagaaactg-aagttgatcaggagatttaacctgaagtttcaaatagctgt 17993711  T
Q  275 ctattgaatttaacctcgtctaagagagagaaagactcaaa-ggaaggtgccaacgttca 333  Q
    ||| || ||| |||||| ||||||| || |||||||| ||| ||||||||||||||||||    
T  17993712 ctagtggattcaacctcatctaagaaagcgaaagactaaaagggaaggtgccaacgttca 17993771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 14 - 120
Target Start/End: Complemental strand, 19244394 - 19244289
Alignment:
Q  14 cataggcaaagttgatcaacataataggtcttggaagaacaaaagagagcaaatgaatcaacaagaagagaaacctaaaagcatctcaagaaatctgcat 113  Q
    |||||||||||||||||||  ||||||||||||||||||||||||||||||||  ||||| ||||||||| ||||| ||||||||| |||||| |||| |    
T  19244394 cataggcaaagttgatcaatttaataggtcttggaagaacaaaagagagcaaagaaatcatcaagaagaggaacct-aaagcatctgaagaaaactgcgt 19244296  T
Q  114 ctgaagt 120  Q
    |||||||    
T  19244295 ctgaagt 19244289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 14 - 99
Target Start/End: Original strand, 17993486 - 17993571
Alignment:
Q  14 cataggcaaagttgatcaacataataggtcttggaagaacaaaagagagcaaatgaatcaacaagaagagaaacctaaaagcatct 99  Q
    ||||| |||||||||||||  |||||||||||||||||||||||||||||||| ||||||||  ||||||||||||| ||||||||    
T  17993486 catagacaaagttgatcaatttaataggtcttggaagaacaaaagagagcaaaggaatcaacgtgaagagaaacctagaagcatct 17993571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 14 - 119
Target Start/End: Original strand, 18006694 - 18006798
Alignment:
Q  14 cataggcaaagttgatcaacataataggtcttggaagaacaaaagagagcaaatgaatcaacaagaagagaaacctaaaagcatctcaagaaatctgcat 113  Q
    |||||||||||||||||||   ||||||||||||||||||||||||||||||| ||| || ||| ||||| ||||| ||||||||| |||||| |||| |    
T  18006694 cataggcaaagttgatcaattcaataggtcttggaagaacaaaagagagcaaaggaaccatcaataagaggaacct-aaagcatctgaagaaaactgcgt 18006792  T
Q  114 ctgaag 119  Q
    ||||||    
T  18006793 ctgaag 18006798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 14 - 119
Target Start/End: Original strand, 16819014 - 16819119
Alignment:
Q  14 cataggcaaagttgatcaacat-aataggtcttggaagaacaaaagagagcaaatgaatcaacaagaagagaaacctaaaagcatctcaagaaatctgca 112  Q
    ||||||||||||| |||||  | ||||||||||||||||||||||||||||||| ||  || ||||||||| ||||| ||||||||| |||||| ||||     
T  16819014 cataggcaaagttaatcaatttcaataggtcttggaagaacaaaagagagcaaaggacccatcaagaagaggaacct-aaagcatctgaagaaaactgcg 16819112  T
Q  113 tctgaag 119  Q
    |||||||    
T  16819113 tctgaag 16819119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 14 - 119
Target Start/End: Original strand, 18774318 - 18774423
Alignment:
Q  14 cataggcaaagttgatcaacat-aataggtcttggaagaacaaaagagagcaaatgaatcaacaagaagagaaacctaaaagcatctcaagaaatctgca 112  Q
    ||||||||||||| |||||  | ||||||||||||||||||||||||||||||| ||| || ||||||||| ||||| ||||||| | |||||| ||||     
T  18774318 cataggcaaagttaatcaatttcaataggtcttggaagaacaaaagagagcaaaggaaccatcaagaagagtaacct-aaagcatatgaagaaaactgcg 18774416  T
Q  113 tctgaag 119  Q
    |||||||    
T  18774417 tctgaag 18774423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 235 - 331
Target Start/End: Original strand, 18006939 - 18007036
Alignment:
Q  235 agttgatcagaagattcaacctgaagactctaa-gagctgtctattgaatttaacctcgtctaagagagagaaagactcaaaggaaggtgccaacgtt 331  Q
    ||||||||||||||||||||||| ||  || || ||| ||||| ||| ||||||||||||||||||||| ||| |||| ||||| |||||||||||||    
T  18006939 agttgatcagaagattcaacctggagtttcaaaagagttgtcttttggatttaacctcgtctaagagagcgaaggactaaaagggaggtgccaacgtt 18007036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 283 - 335
Target Start/End: Complemental strand, 19244131 - 19244079
Alignment:
Q  283 tttaacctcgtctaagagagagaaagactcaaaggaaggtgccaacgttcatt 335  Q
    |||||||||||||||||||| |||||||||||||||||||| |||||||||||    
T  19244131 tttaacctcgtctaagagagcgaaagactcaaaggaaggtgtcaacgttcatt 19244079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 272 - 335
Target Start/End: Original strand, 14710695 - 14710758
Alignment:
Q  272 tgtctattgaatttaacctcgtctaagagagagaaagactcaaaggaaggtgccaacgttcatt 335  Q
    ||||||||| |||||||||||| |||| ||| |||||||| |||||||||||||||||||||||    
T  14710695 tgtctattggatttaacctcgtttaagggagcgaaagactaaaaggaaggtgccaacgttcatt 14710758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 235 - 335
Target Start/End: Original strand, 8997136 - 8997236
Alignment:
Q  235 agttgatcagaagattcaacctgaagactctaagagctgtctattgaatttaacctcgtctaagagagagaaagactcaaaggaaggtgccaacgttcat 334  Q
    ||||||||||||||| ||| |||||  ||| ||||||||||| ||||| ||||||||||| |||| || ||| ||   ||||||| ||||||||||||||    
T  8997136 agttgatcagaagatccaatctgaaatctcaaagagctgtctcttgaagttaacctcgtccaagaaagcgaaggatcaaaaggaaagtgccaacgttcat 8997235  T
Q  335 t 335  Q
    |    
T  8997236 t 8997236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 235 - 335
Target Start/End: Original strand, 16819230 - 16819331
Alignment:
Q  235 agttgatcagaagattcaacctgaagactctaa-gagctgtctattgaatttaacctcgtctaagagagagaaagactcaaaggaaggtgccaacgttca 333  Q
    ||||||||||||||||||| |||||  ||| || ||| ||||| ||||| |||||||||||||||| || ||||||   ||||| || ||||||||||||    
T  16819230 agttgatcagaagattcaatctgaaatctcaaaagagttgtctcttgaagttaacctcgtctaagaaagcgaaagatcgaaagggagttgccaacgttca 16819329  T
Q  334 tt 335  Q
    ||    
T  16819330 tt 16819331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 39 - 77
Target Start/End: Original strand, 13575892 - 13575930
Alignment:
Q  39 aggtcttggaagaacaaaagagagcaaatgaatcaacaa 77  Q
    ||||||||||||||||| |||||||||||||||||||||    
T  13575892 aggtcttggaagaacaatagagagcaaatgaatcaacaa 13575930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 235 - 335
Target Start/End: Original strand, 18774534 - 18774635
Alignment:
Q  235 agttgatcagaagattcaacctgaagactctaa-gagctgtctattgaatttaacctcgtctaagagagagaaagactcaaaggaaggtgccaacgttca 333  Q
    |||||||| |||||||||| |||||  ||| || ||||||||| || || |||||||||||||||||||  || ||   ||||| |||||||||||||||    
T  18774534 agttgatctgaagattcaatctgaaatctcaaaagagctgtctctttaagttaacctcgtctaagagagcaaaggatcaaaagggaggtgccaacgttca 18774633  T
Q  334 tt 335  Q
    ||    
T  18774634 tt 18774635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 36 - 77
Target Start/End: Original strand, 37435266 - 37435307
Alignment:
Q  36 aataggtcttggaagaacaaaagagagcaaatgaatcaacaa 77  Q
    |||||||  |||||||||||||||||||||||||||||||||    
T  37435266 aataggttctggaagaacaaaagagagcaaatgaatcaacaa 37435307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 45 - 82
Target Start/End: Complemental strand, 56034916 - 56034879
Alignment:
Q  45 tggaagaacaaaagagagcaaatgaatcaacaagaaga 82  Q
    ||||||||||||||||||||||||||||||||| ||||    
T  56034916 tggaagaacaaaagagagcaaatgaatcaacaaaaaga 56034879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 92 - 170
Target Start/End: Original strand, 40470324 - 40470406
Alignment:
Q  92 aagcatctcaagaaatctgcatctgaagtctaaagtgcgtctgaagccaaagtgcatctg-----atgacgtcatcagaagcaa 170  Q
    |||||||| |||||| |||| ||||||| ||||||||| ||||||||  |||||||||||     |||||||||||||||||||    
T  40470324 aagcatctgaagaaaactgcgtctgaag-ctaaagtgcttctgaagctgaagtgcatctggagtgatgacgtcatcagaagcaa 40470406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 14 - 72
Target Start/End: Original strand, 49001636 - 49001695
Alignment:
Q  14 cataggcaaagttgatcaacat-aataggtcttggaagaacaaaagagagcaaatgaatc 72  Q
    ||||||||||||| |||||  | |||||||||||||||||||| |||||||||| |||||    
T  49001636 cataggcaaagttaatcaatttcaataggtcttggaagaacaatagagagcaaaggaatc 49001695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 39 - 77
Target Start/End: Original strand, 22675298 - 22675336
Alignment:
Q  39 aggtcttggaagaacaaaagagagcaaatgaatcaacaa 77  Q
    ||||||||||||||||| |||||||||| ||||||||||    
T  22675298 aggtcttggaagaacaatagagagcaaaggaatcaacaa 22675336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 92 - 169
Target Start/End: Complemental strand, 25657676 - 25657595
Alignment:
Q  92 aagcatctcaagaaatctgcatctgaagtctaaagtgcgtctgaagccaaagtgcatctg-----atgacgtcatcagaagca 169  Q
    |||||||| |||||| |||| ||||||| ||||||||| ||||||||  |||||||||||     ||||||||||||||||||    
T  25657676 aagcatctgaagaaaactgcgtctgaag-ctaaagtgcttctgaagctgaagtgcatctggagtgatgacgtcatcagaagca 25657595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 92 - 169
Target Start/End: Original strand, 40454068 - 40454149
Alignment:
Q  92 aagcatctcaagaaatctgcatctgaagtctaaagtgcgtctgaagccaaagtgcatctg-----atgacgtcatcagaagca 169  Q
    |||||||| |||||| |||| ||||||| ||||||||| ||||||||  |||||||||||     ||||||||||||||||||    
T  40454068 aagcatctgaagaaaactgcgtctgaag-ctaaagtgcttctgaagctgaagtgcatctggagtgatgacgtcatcagaagca 40454149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 39 - 77
Target Start/End: Complemental strand, 45833759 - 45833721
Alignment:
Q  39 aggtcttggaagaacaaaagagagcaaatgaatcaacaa 77  Q
    |||| ||||||||||||||||||||||| ||||||||||    
T  45833759 aggttttggaagaacaaaagagagcaaacgaatcaacaa 45833721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 89 - 169
Target Start/End: Original strand, 47151795 - 47151879
Alignment:
Q  89 taaaagcatctcaagaaatctgcatctgaagtctaaagtgcgtctgaagccaaagtgcatc-----tgatgacgtcatcagaagca 169  Q
    ||||||||||| |||||| |||| ||||||| ||||||||| ||||||||  |||||| ||     ||||||||||||||||||||    
T  47151795 taaaagcatctgaagaaaactgcgtctgaag-ctaaagtgcttctgaagctgaagtgcctctgaagtgatgacgtcatcagaagca 47151879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 45 - 77
Target Start/End: Complemental strand, 3395983 - 3395951
Alignment:
Q  45 tggaagaacaaaagagagcaaatgaatcaacaa 77  Q
    |||||||||||||||||||||| ||||||||||    
T  3395983 tggaagaacaaaagagagcaaaggaatcaacaa 3395951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 45 - 77
Target Start/End: Complemental strand, 9141220 - 9141188
Alignment:
Q  45 tggaagaacaaaagagagcaaatgaatcaacaa 77  Q
    |||||||||||||||||||||| ||||||||||    
T  9141220 tggaagaacaaaagagagcaaaggaatcaacaa 9141188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 45 - 77
Target Start/End: Complemental strand, 12601458 - 12601426
Alignment:
Q  45 tggaagaacaaaagagagcaaatgaatcaacaa 77  Q
    |||||||||||||||||||||| ||||||||||    
T  12601458 tggaagaacaaaagagagcaaaggaatcaacaa 12601426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 45 - 77
Target Start/End: Original strand, 14904073 - 14904105
Alignment:
Q  45 tggaagaacaaaagagagcaaatgaatcaacaa 77  Q
    ||||||||||||||||||||||||||| |||||    
T  14904073 tggaagaacaaaagagagcaaatgaataaacaa 14904105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 45 - 77
Target Start/End: Original strand, 19620846 - 19620878
Alignment:
Q  45 tggaagaacaaaagagagcaaatgaatcaacaa 77  Q
    |||||||||||||||||||||| ||||||||||    
T  19620846 tggaagaacaaaagagagcaaaggaatcaacaa 19620878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 39 - 119
Target Start/End: Complemental strand, 29121738 - 29121659
Alignment:
Q  39 aggtcttggaagaacaaaagagagcaaatgaatcaacaagaagagaaacctaaaagcatctcaagaaatctgcatctgaag 119  Q
    ||||||||||||||||| | |||||||| |||||||||| ||| ||| | ||||| | ||| |||||| ||||| ||||||    
T  29121738 aggtcttggaagaacaataaagagcaaaggaatcaacaaaaagggaagcttaaaa-cgtctgaagaaaactgcacctgaag 29121659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 36 - 72
Target Start/End: Complemental strand, 55651903 - 55651867
Alignment:
Q  36 aataggtcttggaagaacaaaagagagcaaatgaatc 72  Q
    |||||||||||||||||||| |||||||||| |||||    
T  55651903 aataggtcttggaagaacaatagagagcaaaggaatc 55651867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 184; Significance: 1e-99; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 184; E-Value: 1e-99
Query Start/End: Original strand, 14 - 335
Target Start/End: Complemental strand, 61614 - 61308
Alignment:
Q  14 cataggcaaagttgatcaacataataggtcttggaagaacaaaagagagcaaatgaatcaacaagaagagaaacctaaaagcatctcaagaaatctgcat 113  Q
    ||||| |||||||||||||  ||||||||||| ||| |||||||||||||||| ||||||||  ||||||||||||| |||||||| ||||||||  |||    
T  61614 catagacaaagttgatcaatttaataggtcttagaaaaacaaaagagagcaaaggaatcaacgtgaagagaaacctagaagcatctgaagaaatcaacat 61515  T
Q  114 ctgaagtctaaagtgcgtctgaagccaaagtgcatctgatgacgtcatcagaagcaaatccgtcagaagcaagaccttcagaagccatttgttcagaagc 213  Q
    ||||||||||||||||||||||||||||| ||||| |||||||||||||| |||||||||||||||||||               |||||| ||||||||    
T  61514 ctgaagtctaaagtgcgtctgaagccaaaatgcatatgatgacgtcatcaaaagcaaatccgtcagaagc---------------catttgctcagaagc 61430  T
Q  214 tgtataacatcagaatctgcaagttgatcagaagattcaacctgaagactctaagagctgtctattgaatttaacctcgtctaagagagagaaagactca 313  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||| ||| |||||||| |    
T  61429 tgtataacatcagaaactgcaagttgatcagaagattcaacctgaagactctaagagctgtctattggatttaacctcgtttaagggagcgaaagactaa 61330  T
Q  314 aaggaaggtgccaacgttcatt 335  Q
    ||||||||||||||||||||||    
T  61329 aaggaaggtgccaacgttcatt 61308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 184; Significance: 1e-99; HSPs: 27)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 184; E-Value: 1e-99
Query Start/End: Original strand, 14 - 332
Target Start/End: Complemental strand, 40229062 - 40228744
Alignment:
Q  14 cataggcaaagttgatcaacataataggtcttggaagaacaaaagagagcaaatgaatcaacaagaagagaaacctaaaagcatctcaagaaatctgcat 113  Q
    ||||| ||||||| |||||  |||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||| ||||||||||| |    
T  40229062 catagacaaagttaatcaatttaataggtcttggaagaacaaaagagagcaaaggaatcaacaagaagagaaacctagaagcatctgaagaaatctgcct 40228963  T
Q  114 ctgaagtctaaagtgcgtctgaagccaaagtgcatctgatgacgtcatcagaagcaaatccgtcagaagcaagaccttcagaagccatttgttcagaagc 213  Q
    |||||||  |||||||||||||||||||| ||||||||||||||||||||||||||||||  ||||||||||||||||||||||| | ||||||||||||    
T  40228962 ctgaagttgaaagtgcgtctgaagccaaaatgcatctgatgacgtcatcagaagcaaatctatcagaagcaagaccttcagaagctaattgttcagaagc 40228863  T
Q  214 tgtat-aacatcagaatctgcaagttgatcagaagattcaacctgaagactctaagagctgtctattgaatttaacctcgtctaagagagagaaagactc 312  Q
    | ||| |||| ||||| ||| ||||||||||| |||||||| ||||||  || || |||||||||||| ||| |||||||||||||| || ||||||||     
T  40228862 tatataaacaccagaaactg-aagttgatcaggagattcaatctgaagtttcaaacagctgtctattggattcaacctcgtctaagaaagcgaaagacta 40228764  T
Q  313 aaaggaaggtgccaacgttc 332  Q
    || |||||||||||||||||    
T  40228763 aagggaaggtgccaacgttc 40228744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 174; E-Value: 1e-93
Query Start/End: Original strand, 14 - 331
Target Start/End: Original strand, 20214850 - 20215166
Alignment:
Q  14 cataggcaaagttgatcaacataataggtcttggaagaacaaaagagagcaaatgaatcaacaagaagagaaacctaaaagcatctcaagaaatctgcat 113  Q
    ||||| ||||||| || ||  ||||||||||||||||||||||||||||| || |||||| |||||||||||||||| |||||||| ||||||||||| |    
T  20214850 catagacaaagttaattaatttaataggtcttggaagaacaaaagagagctaaggaatcatcaagaagagaaacctagaagcatctgaagaaatctgcct 20214949  T
Q  114 ctgaagtctaaagtgcgtctgaagccaaagtgcatctgatgacgtcatcagaagcaaatccgtcagaagcaagaccttcagaagccatttgttcagaagc 213  Q
     ||||||  ||||||| |||||||||||| ||||||||||||||||||||||||||||||  |||||||||||||||||||||||||  |||||||||||    
T  20214950 ttgaagttgaaagtgcttctgaagccaaaatgcatctgatgacgtcatcagaagcaaatctatcagaagcaagaccttcagaagccaactgttcagaagc 20215049  T
Q  214 tgtataacatcagaatctgcaagttgatcagaagattcaacctgaagactctaagagctgtctattgaatttaacctcgtctaagagagagaaagactca 313  Q
    |||||| |||||||| ||| ||||||||||||||||||||| ||||| ||| || | || ||||||| ||| |||||||||||||| || |||||||| |    
T  20215050 tgtatatcatcagaaactg-aagttgatcagaagattcaacatgaagtctcaaataactatctattggattcaacctcgtctaagaaagcgaaagactaa 20215148  T
Q  314 aaggaaggtgccaacgtt 331  Q
    | ||||||||||||||||    
T  20215149 agggaaggtgccaacgtt 20215166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 174; E-Value: 1e-93
Query Start/End: Original strand, 20 - 332
Target Start/End: Original strand, 40032509 - 40032821
Alignment:
Q  20 caaagttgatcaacataataggtcttggaagaacaaaagagagcaaatgaatcaacaagaagagaaacctaaaagcatctcaagaaatctgcatctgaag 119  Q
    |||||||||||||  ||||| |||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||| ||||||||||| |||||||    
T  40032509 caaagttgatcaatttaataagtcttggaagaacaaaagagagcaaaggaatcaacaagaagagaaacctagaagcatctgaagaaatctgcctctgaag 40032608  T
Q  120 tctaaagtgcgtctgaagccaaagtgcatctgatgacgtcatcagaagcaaatccgtcagaagcaagaccttcagaagccatttgttcagaagctgtat- 218  Q
    |  |||||||||||||||||| | | ||||||||||||||||||||||||||||  |||||||||||| |||||||||||| ||||||||||||| |||     
T  40032609 ttgaaagtgcgtctgaagccagaatacatctgatgacgtcatcagaagcaaatctatcagaagcaagatcttcagaagccaattgttcagaagctatata 40032708  T
Q  219 aacatcagaatctgcaagttgatcagaagattcaacctgaagactctaagagctgtctattgaatttaacctcgtctaagagagagaaagactcaaagga 318  Q
    |||| ||||| ||| ||||||||||| |||||||| ||||||  || || |||||||||||| ||| |||||||||||||| || |||||||| || |||    
T  40032709 aacaccagaaactg-aagttgatcaggagattcaatctgaagtttcaaacagctgtctattggattcaacctcgtctaagaaagcgaaagactaaaggga 40032807  T
Q  319 aggtgccaacgttc 332  Q
    ||||||||||||||    
T  40032808 aggtgccaacgttc 40032821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 14 - 332
Target Start/End: Complemental strand, 1915803 - 1915503
Alignment:
Q  14 cataggcaaagttgatcaacataataggtcttggaagaacaaaagagagcaaatgaatcaacaagaagagaaacctaaaagcatctcaagaaatctgcat 113  Q
    ||||| |||||||||||||  |||||||||||||||||||||||||||||||| ||||||||||||||||||| ||| |||||||| ||||||||||| |    
T  1915803 catagacaaagttgatcaatgtaataggtcttggaagaacaaaagagagcaaaggaatcaacaagaagagaaatctagaagcatctgaagaaatctgcct 1915704  T
Q  114 ctgaagtctaaagtgcgtctgaagccaaagtgcatctgatgacgtcatcagaagcaaatccgtcagaagcaagaccttcagaagccatttgttcagaagc 213  Q
    ||||||                  ||||| |||||||||||||||||||| |||| ||||  ||||||||||||||||||||||| | ||||||| ||||    
T  1915703 ctgaag------------------ccaaaatgcatctgatgacgtcatcaaaagcgaatctatcagaagcaagaccttcagaagctaattgttcataagc 1915622  T
Q  214 tgtat-aacatcagaatctgcaagttgatcagaagattcaacctgaagactctaagagctgtctattgaatttaacctcgtctaagagagagaaagactc 312  Q
    | ||| |||| ||||| ||| ||||||||||| |||||||| ||||||  || || |||||||||||| | | |||||||||||||| || ||||| ||     
T  1915621 tatataaacaccagaaactg-aagttgatcaggagattcaatctgaagtttcaaatagctgtctattggactcaacctcgtctaagaaagcgaaagtcta 1915523  T
Q  313 aaaggaaggtgccaacgttc 332  Q
     |||||||||||||||||||    
T  1915522 taaggaaggtgccaacgttc 1915503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 178 - 335
Target Start/End: Complemental strand, 13405358 - 13405199
Alignment:
Q  178 agaagcaagaccttcagaagccatttgttcagaagctgtata---acatcagaatctgcaagttgatcagaagattcaacctgaagactctaagagctgt 274  Q
    ||||||||||||||| ||||| | ||||||||||||| ||||   ||||||||| ||| ||||||||||| |||||||||||||||  || || || |||    
T  13405358 agaagcaagaccttcggaagctaattgttcagaagctatatataaacatcagaaactg-aagttgatcaggagattcaacctgaagtttcaaatagttgt 13405260  T
Q  275 ctattgaatttaacctcgtctaagagagagaaagactcaaaggaaggtgccaacgttcatt 335  Q
    |||||| ||||||||||||||||| ||| |||| ||| |||||||||||||||||||||||    
T  13405259 ctattggatttaacctcgtctaagggagcgaaatactaaaaggaaggtgccaacgttcatt 13405199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 14 - 119
Target Start/End: Complemental strand, 13405489 - 13405384
Alignment:
Q  14 cataggcaaagttgatcaacataataggtcttggaagaacaaaagagagcaaatgaatcaacaagaagagaaacctaaaagcatctcaagaaatctgcat 113  Q
    ||||| |||||||||||||  |||||||||||||||||||||||||||||||| |||||||   ||||||||||||| |||||||| ||||||||||| |    
T  13405489 catagacaaagttgatcaatttaataggtcttggaagaacaaaagagagcaaaggaatcaatgtgaagagaaacctagaagcatctgaagaaatctgcct 13405390  T
Q  114 ctgaag 119  Q
    ||||||    
T  13405389 ctgaag 13405384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 36 - 120
Target Start/End: Original strand, 20167844 - 20167927
Alignment:
Q  36 aataggtcttggaagaacaaaagagagcaaatgaatcaacaagaagagaaacctaaaagcatctcaagaaatctgcatctgaagt 120  Q
    |||| |||||||||||||||||||||||||| ||| || ||||||||| ||||| ||||||||| |||||| |||||||||||||    
T  20167844 aatatgtcttggaagaacaaaagagagcaaaggaaccatcaagaagaggaacct-aaagcatctgaagaaaactgcatctgaagt 20167927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 21 - 111
Target Start/End: Complemental strand, 23478758 - 23478669
Alignment:
Q  21 aaagttgatcaacataataggtcttggaagaacaaaagagagcaaatgaatcaacaagaagagaaacctaaaagcatctcaagaaatctgc 111  Q
    |||||||||||   ||| |||||||||||||||||||||||||||| |||||||||| ||||||| ||| ||||||||| |||||| ||||    
T  23478758 aaagttgatcattttaaaaggtcttggaagaacaaaagagagcaaaggaatcaacaaaaagagaagcct-aaagcatctgaagaaaactgc 23478669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 14 - 119
Target Start/End: Original strand, 36096847 - 36096952
Alignment:
Q  14 cataggcaaagttgatcaacat-aataggtcttggaagaacaaaagagagcaaatgaatcaacaagaagagaaacctaaaagcatctcaagaaatctgca 112  Q
    ||||||||||||| |||||  | ||||||||||||||||||||||||||||||| ||| || ||||||||| ||||| ||||||| | |||||| ||||     
T  36096847 cataggcaaagttaatcaatttcaataggtcttggaagaacaaaagagagcaaaggaaccatcaagaagaggaacct-aaagcatatgaagaaaactgcg 36096945  T
Q  113 tctgaag 119  Q
    |||||||    
T  36096946 tctgaag 36096952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 14 - 92
Target Start/End: Original strand, 36095390 - 36095469
Alignment:
Q  14 cataggcaaagttgatcaacat-aataggtcttggaagaacaaaagagagcaaatgaatcaacaagaagagaaacctaaa 92  Q
    ||||||||||||| |||||  | ||||||||||||||||||||||||||||||| ||| || ||||||||| ||||||||    
T  36095390 cataggcaaagttaatcaatttcaataggtcttggaagaacaaaagagagcaaaggaaccatcaagaagaggaacctaaa 36095469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 235 - 332
Target Start/End: Original strand, 36095622 - 36095720
Alignment:
Q  235 agttgatcagaagattcaacctgaagactctaa-gagctgtctattgaatttaacctcgtctaagagagagaaagactcaaaggaaggtgccaacgttc 332  Q
    ||||||||||||||||||| |||||  ||| || ||||||||| ||||| ||||||||||||||||||| ||||||   ||||| || |||||||||||    
T  36095622 agttgatcagaagattcaatctgaaatctcaaaagagctgtctcttgaagttaacctcgtctaagagagcgaaagatcgaaagggagttgccaacgttc 36095720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 235 - 332
Target Start/End: Original strand, 36097079 - 36097177
Alignment:
Q  235 agttgatcagaagattcaacctgaagactctaa-gagctgtctattgaatttaacctcgtctaagagagagaaagactcaaaggaaggtgccaacgttc 332  Q
    ||||||||||||||||||| |||||  ||| || ||||||||| ||||| ||||||||||||||||||| ||||||   ||||| || |||||||||||    
T  36097079 agttgatcagaagattcaatctgaaatctcaaaagagctgtctcttgaagttaacctcgtctaagagagcgaaagatcgaaagggagttgccaacgttc 36097177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 235 - 335
Target Start/End: Original strand, 20168036 - 20168137
Alignment:
Q  235 agttgatcagaagattcaacctgaagactctaa-gagctgtctattgaatttaacctcgtctaagagagagaaagactcaaaggaaggtgccaacgttca 333  Q
    ||||| ||||||||||||| |||||  ||| || ||||||||| ||||| ||||||||||||||||||| ||| ||   ||||| |||||||||||||||    
T  20168036 agttgttcagaagattcaatctgaaatctcaaaagagctgtctcttgaagttaacctcgtctaagagagcgaaggatcaaaagggaggtgccaacgttca 20168135  T
Q  334 tt 335  Q
    ||    
T  20168136 tt 20168137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 235 - 335
Target Start/End: Complemental strand, 13534100 - 13533999
Alignment:
Q  235 agttgatcagaagattcaacctgaagactctaa-gagctgtctattgaatttaacctcgtctaagagagagaaagactcaaaggaaggtgccaacgttca 333  Q
    ||||||||||||||||||| |||||  ||| || ||| ||||| ||||| ||||||||||||||||||| ||| ||   ||||| | |||||||||||||    
T  13534100 agttgatcagaagattcaatctgaaatctcaaaagagttgtctcttgaagttaacctcgtctaagagagcgaatgatcaaaagggaagtgccaacgttca 13534001  T
Q  334 tt 335  Q
    ||    
T  13534000 tt 13533999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 235 - 335
Target Start/End: Original strand, 35543098 - 35543199
Alignment:
Q  235 agttgatcagaagattcaacctgaagactctaa-gagctgtctattgaatttaacctcgtctaagagagagaaagactcaaaggaaggtgccaacgttca 333  Q
    ||||||||||||||||||| |||||  ||| || ||||||||| ||||| ||||||||||||||||||| ||| ||   ||||| | |||| ||||||||    
T  35543098 agttgatcagaagattcaatctgaaatctcaaaagagctgtctcttgaagttaacctcgtctaagagagcgaaggatcaaaagggaagtgctaacgttca 35543197  T
Q  334 tt 335  Q
    ||    
T  35543198 tt 35543199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 39 - 85
Target Start/End: Complemental strand, 33933669 - 33933623
Alignment:
Q  39 aggtcttggaagaacaaaagagagcaaatgaatcaacaagaagagaa 85  Q
    ||||||||||||||||| |||||||||| |||||||||| |||||||    
T  33933669 aggtcttggaagaacaatagagagcaaaggaatcaacaaaaagagaa 33933623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 123 - 234
Target Start/End: Original strand, 11207824 - 11207932
Alignment:
Q  123 aaagtgcgtctgaagccaaagtgcatctgatgacgtcatcagaagcaaatccgtcagaagcaagaccttcagaagccatttgttcagaagctgtataaca 222  Q
    |||||||  |||||| ||||||||| | |||||||||||||||||||| |   |||||||| || |  |||||||||||||  ||||||| |||||| ||    
T  11207824 aaagtgctcctgaagacaaagtgcaccagatgacgtcatcagaagcaatt---tcagaagctagtctatcagaagccatttcatcagaagttgtatatca 11207920  T
Q  223 tcagaatctgca 234  Q
     ||||| |||||    
T  11207921 ccagaaactgca 11207932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 235 - 335
Target Start/End: Complemental strand, 13523373 - 13523272
Alignment:
Q  235 agttgatcagaagattcaacctgaagactctaa-gagctgtctattgaatttaacctcgtctaagagagagaaagactcaaaggaaggtgccaacgttca 333  Q
    ||||||||||||||||||| |||||  ||| || ||| ||||| ||||| ||||||| ||||||||||| ||| ||   ||||| | |||||||||||||    
T  13523373 agttgatcagaagattcaatctgaaatctcaaaagagttgtctcttgaagttaaccttgtctaagagagcgaaggatcaaaagggaagtgccaacgttca 13523274  T
Q  334 tt 335  Q
    ||    
T  13523273 tt 13523272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 39 - 170
Target Start/End: Complemental strand, 11994281 - 11994152
Alignment:
Q  39 aggtcttggaagaacaaaagagagcaaatgaatcaacaagaagagaaacctaaaagcatctcaagaaatctgcatctgaagtctaaagtgcgtctgaagc 138  Q
    |||||||||||||||||   |||||||| |||||||||| ||| | || || ||||||||| |||||| ||||  ||||||| ||||| ||  ||||||     
T  11994281 aggtcttggaagaacaattaagagcaaaggaatcaacaaaaag-ggaagcttaaagcatctgaagaaaactgctcctgaagt-taaagcgctcctgaaga 11994184  T
Q  139 caaagtgcatctgatgacgtcatcagaagcaa 170  Q
    || || ||  ||||||| ||||||||||||||    
T  11994183 cacagcgctcctgatgatgtcatcagaagcaa 11994152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 14 - 72
Target Start/End: Complemental strand, 13534317 - 13534258
Alignment:
Q  14 cataggcaaagttgatcaacat-aataggtcttggaagaacaaaagagagcaaatgaatc 72  Q
    ||||||||||||| |||||  | |||||||||||||||||||| |||||||||| |||||    
T  13534317 cataggcaaagttaatcaatttcaataggtcttggaagaacaatagagagcaaaggaatc 13534258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 92 - 169
Target Start/End: Complemental strand, 1109572 - 1109491
Alignment:
Q  92 aagcatctcaagaaatctgcatctgaagtctaaagtgcgtctgaagccaaagtgcatctga-----tgacgtcatcagaagca 169  Q
    |||||||| |||||| |||| ||||||| ||||||||| ||||||||  ||||||||||||     |||||||||||||||||    
T  1109572 aagcatctgaagaaaactgcgtctgaag-ctaaagtgcttctgaagctgaagtgcatctgaagtgatgacgtcatcagaagca 1109491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 47 - 77
Target Start/End: Complemental strand, 21910884 - 21910854
Alignment:
Q  47 gaagaacaaaagagagcaaatgaatcaacaa 77  Q
    |||||||||||||||||||||||||||||||    
T  21910884 gaagaacaaaagagagcaaatgaatcaacaa 21910854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 40 - 183
Target Start/End: Original strand, 3245210 - 3245358
Alignment:
Q  40 ggtcttggaagaacaaa-agagagcaaatgaatcaacaagaagagaaacctaaaagcatctcaagaaatctgcatctgaagtctaaagtgcgtctgaagc 138  Q
    ||||||||||||||||| | |||||||||  |||||||| ||| | || || ||||| ||| |||||| ||||  ||||||| | |||||| |||||||     
T  3245210 ggtcttggaagaacaaataaagagcaaatacatcaacaaaaag-ggaagcttaaagcgtctgaagaaaactgctcctgaagtttgaagtgcttctgaaga 3245308  T
Q  139 caaagtgcatc-----tgatgacgtcatcagaagcaaatccgtcagaagc 183  Q
    |||||||| ||     |||||||||||| |||||||| | | ||||||||    
T  3245309 caaagtgcttctaaagtgatgacgtcattagaagcaagttcatcagaagc 3245358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 39 - 120
Target Start/End: Original strand, 11207724 - 11207804
Alignment:
Q  39 aggtcttggaagaacaaaagagagcaaatgaatcaacaagaagagaaacctaaaagcatctcaagaaatctgcatctgaagt 120  Q
    ||||||||||||||||||||| ||| || || ||||||  ||||||| ||| ||||| ||| |||||| |||| ||||||||    
T  11207724 aggtcttggaagaacaaaagaaagcgaaagattcaacataaagagaagcct-aaagcgtctgaagaaaactgcctctgaagt 11207804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 14 - 66
Target Start/End: Complemental strand, 13523590 - 13523537
Alignment:
Q  14 cataggcaaagttgatcaacat-aataggtcttggaagaacaaaagagagcaaa 66  Q
    ||||||||||||| |||||  | |||||||||||||||||||| ||||||||||    
T  13523590 cataggcaaagttaatcaatttcaataggtcttggaagaacaatagagagcaaa 13523537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 93 - 169
Target Start/End: Original strand, 36084295 - 36084376
Alignment:
Q  93 agcatctcaagaaatctgcatctgaagtctaaagtgcgtctgaagccaaagtgcatc-----tgatgacgtcatcagaagca 169  Q
    ||||||| |||||| |||| |||||||  |||||||| ||||||||  |||||||||     ||||||||||||||||||||    
T  36084295 agcatctgaagaaaactgcgtctgaagcttaaagtgcttctgaagctgaagtgcatctgaagtgatgacgtcatcagaagca 36084376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 36 - 72
Target Start/End: Complemental strand, 32754431 - 32754395
Alignment:
Q  36 aataggtcttggaagaacaaaagagagcaaatgaatc 72  Q
    |||||||||||||||||||| |||||||||| |||||    
T  32754431 aataggtcttggaagaacaatagagagcaaaggaatc 32754395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 176; Significance: 9e-95; HSPs: 30)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 176; E-Value: 9e-95
Query Start/End: Original strand, 14 - 329
Target Start/End: Complemental strand, 29379978 - 29379664
Alignment:
Q  14 cataggcaaagttgatcaacataataggtcttggaagaacaaaagagagcaaatgaatcaacaagaagagaaacctaaaagcatctcaagaaatctgcat 113  Q
    ||||| |||||||||||||  ||| |||||||||||||||||||||||| ||| ||||||||||||||||||||||| |||||||| ||||||||||| |    
T  29379978 catagacaaagttgatcaatttaacaggtcttggaagaacaaaagagagtaaaggaatcaacaagaagagaaacctagaagcatctgaagaaatctgcct 29379879  T
Q  114 ctgaagtctaaagtgcgtctgaagccaaagtgcatctgatgacgtcatcagaagcaaatccgtcagaagcaagaccttcagaagccatttgttcagaagc 213  Q
     ||||||  ||||||| |||||||||||| || |||||||||||||||||||||||||||  ||||||||||||||||||||||||| ||||||||||||    
T  29379878 ttgaagttgaaagtgcatctgaagccaaaatgtatctgatgacgtcatcagaagcaaatctatcagaagcaagaccttcagaagccaattgttcagaagc 29379779  T
Q  214 tgtataacatcagaatctgcaagttgatcagaagattcaacctgaagactctaagagctgtctattgaatttaacctcgtctaagagagagaaagactca 313  Q
    ||||||||| ||||| ||| ||||| |||||||||||||||| ||||  || || |||||||||||||||| |||||||||||||| || |||||||| |    
T  29379778 tgtataacaccagaaactg-aagtttatcagaagattcaacccgaagtttcaaatagctgtctattgaattcaacctcgtctaagaaagcgaaagactaa 29379680  T
Q  314 aaggaaggtgccaacg 329  Q
    |  ||||||| |||||    
T  29379679 agagaaggtggcaacg 29379664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 168; E-Value: 5e-90
Query Start/End: Original strand, 14 - 329
Target Start/End: Original strand, 17518809 - 17519123
Alignment:
Q  14 cataggcaaagttgatcaacataataggtcttggaagaacaaaagagagcaaatgaatcaacaagaagagaaacctaaaagcatctcaagaaatctgcat 113  Q
    ||||| ||| |||||||||  |||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||| |||||||| |  |    
T  17518809 catagacaacgttgatcaatttaataggtcttggaagaacaaaagagagcaaaggaatcaacaagaagagaaacttaaaagcatctgaagaaatccgtct 17518908  T
Q  114 ctgaagtctaaagtgcgtctgaagccaaagtgcatctgatgacgtcatcagaagcaaatccgtcagaagcaagaccttcagaagccatttgttcagaagc 213  Q
    |||||||  ||||||| |||||||||||| ||||||||||||||||||||||||| ||||  ||||||||||||||||||||||||| | ||||||||||    
T  17518909 ctgaagttgaaagtgcttctgaagccaaaatgcatctgatgacgtcatcagaagcgaatctatcagaagcaagaccttcagaagccaatcgttcagaagc 17519008  T
Q  214 tgtataacatcagaatctgcaagttgatcagaagattcaacctgaagactctaagagctgtctattgaatttaacctcgtctaagagagagaaagactca 313  Q
    |||||| || ||||| ||| |||||||||||||||||||||| ||||  || || |||||||||||| ||| ||||||||| |||| || |||||||| |    
T  17519009 tgtatatcaccagaaactg-aagttgatcagaagattcaacccgaagtttcaaatagctgtctattggattcaacctcgtccaagaaagcgaaagactaa 17519107  T
Q  314 aaggaaggtgccaacg 329  Q
    | |||||||| |||||    
T  17519108 agggaaggtggcaacg 17519123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 14 - 171
Target Start/End: Original strand, 23270899 - 23271056
Alignment:
Q  14 cataggcaaagttgatcaacataataggtcttggaagaacaaaagagagcaaatgaatcaacaagaagagaaacctaaaagcatctcaagaaatctgcat 113  Q
    ||||| |||||||||||||||||||| |||||||||||||| | ||||||||| ||||||||||||||||||||||| |||||||| |||||||||||||    
T  23270899 catagtcaaagttgatcaacataataagtcttggaagaacataggagagcaaaggaatcaacaagaagagaaacctagaagcatctgaagaaatctgcat 23270998  T
Q  114 ctgaagtctaaagtgcgtctgaagccaaagtgcatctgatgacgtcatcagaagcaaa 171  Q
    ||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||    
T  23270999 ctgaagtctaaagtgcgtctgaagccaaaatgcatctaatgacgtcatcagaagcaaa 23271056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 14 - 256
Target Start/End: Complemental strand, 40003596 - 40003354
Alignment:
Q  14 cataggcaaagttgatcaacat-aataggtcttggaagaacaaaagagagcaaatgaatcaacaagaagagaaacctaaaagcatctcaagaaatctgca 112  Q
    ||||| |||||||||||||  | ||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||| |||||||||||     
T  40003596 catagacaaagttgatcaaatttaataggtcttggaagaacaaaagagagcaaaggaatcaacaagaagagaaacct-aaagcatctgaagaaatctgcc 40003498  T
Q  113 tctgaagtctaaagtgcgtctgaagccaaagtgcatctgatgacgtcatcagaagcaaatccgtcagaagcaagaccttcagaagcc-atttgttcagaa 211  Q
    ||||||||  ||||||| |||||| ||||| |||||||||||||||||||| |||| | |   ||| |||| || |||||||||||| ||||| ||||||    
T  40003497 tctgaagttgaaagtgcttctgaaaccaaaatgcatctgatgacgtcatcaaaagcgagtttatcataagcgagtccttcagaagccaatttgatcagaa 40003398  T
Q  212 gctgtataacatcagaatctgcaagttgatcagaagattcaacct 256  Q
    |||||||| || ||||| ||| |||||||||||||||||||||||    
T  40003397 gctgtatatcaccagaaactg-aagttgatcagaagattcaacct 40003354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 114; E-Value: 9e-58
Query Start/End: Original strand, 14 - 332
Target Start/End: Complemental strand, 8032418 - 8032115
Alignment:
Q  14 cataggcaaagttgatcaacataataggtcttggaagaacaaaagagagcaaatgaatcaacaagaagagaaacctaaaagcatctcaagaaatctgcat 113  Q
    ||||| |||||||||||||  |||||||||||||||||||||||||||||||| ||||||||  ||||||||||||| |||||||| ||||||||||| |    
T  8032418 catagacaaagttgatcaatttaataggtcttggaagaacaaaagagagcaaaggaatcaacgtgaagagaaacctagaagcatctgaagaaatctgcct 8032319  T
Q  114 ctgaagtctaaagtgcgtctgaagccaaagtgcatctgatgacgtcatcagaagcaaatccgtcagaagcaagaccttcagaagccatttgttcagaagc 213  Q
    |||||||  ||||||| |||||||  ||| ||||| |||||||||||||||||               ||||||||||||||||| | ||||||||||||    
T  8032318 ctgaagttgaaagtgcctctgaagagaaaatgcatatgatgacgtcatcagaa---------------gcaagaccttcagaagctaattgttcagaagc 8032234  T
Q  214 tgtat-aacatcagaatctgcaagttgatcagaagattcaacctgaagactctaagagctgtctattgaatttaacctcgtctaagagagagaaagactc 312  Q
    | ||| |||| ||||| ||| ||||||||||| |||||||| ||||||  || || || |||||||||  || |||||||||||||| || ||||||||     
T  8032233 tatataaacaccagaaactg-aagttgatcaggagattcaatctgaagtttcaaatagttgtctattggtttcaacctcgtctaagaaagcgaaagacta 8032135  T
Q  313 aaaggaaggtgccaacgttc 332  Q
    || |||||||||||||||||    
T  8032134 aagggaaggtgccaacgttc 8032115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 14 - 183
Target Start/End: Original strand, 18534814 - 18534983
Alignment:
Q  14 cataggcaaagttgatcaacataataggtcttggaagaacaaaagagagcaaatgaatcaacaagaagagaaacctaaaagcatctcaagaaatctgcat 113  Q
    ||||| |||||||||||||  |||||||||||||||||||||||||||||||| ||||||||  ||||||||||||| |||||||| ||||||||||| |    
T  18534814 catagacaaagttgatcaatttaataggtcttggaagaacaaaagagagcaaaggaatcaacgtgaagagaaacctagaagcatctgaagaaatctgcct 18534913  T
Q  114 ctgaagtctaaagtgcgtctgaagccaaagtgcatctgatgacgtcatcagaagcaaatccgtcagaagc 183  Q
    |||||||  ||||||| | ||||| |||| |||||||||||||||||||||||||||  || ||||||||    
T  18534914 ctgaagttgaaagtgcctttgaagacaaaatgcatctgatgacgtcatcagaagcaagaccttcagaagc 18534983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 16 - 335
Target Start/End: Complemental strand, 19461571 - 19461242
Alignment:
Q  16 taggcaaagttgatcaacataataggtcttggaagaacaaaagagagcaaatgaatcaacaagaagagaaacctaaaagcatctcaagaaatctgcatct 115  Q
    ||||||||||||||| |   ||||||||||||||||||||||||||||||| ||| || ||||||||| |||||||| |||||| |||||| |||| |||    
T  19461571 taggcaaagttgatctattcaataggtcttggaagaacaaaagagagcaaaggaaccatcaagaagaggaacctaaa-gcatctgaagaaaactgcgtct 19461473  T
Q  116 gaagtcta-aagtgcgtctgaagcca-aagtgcatctga-----tgacgtcatcagaagc--aaatccgtcagaagcaa-gaccttcagaagccatttgt 205  Q
    ||||| |  |||||| |||||||    |||||| |||||     |||| |||||||||||  |||  | |||||||||| |  | |||||||| | ||      
T  19461472 gaagttttgaagtgcttctgaagtttcaagtgcctctgaagtaatgacatcatcagaagccaaaactcatcagaagcaaagttcatcagaagcaacttca 19461373  T
Q  206 tcagaagctgtataa-catcagaatctgcaagttgatcagaagattcaacctgaagactctaa-gagctgtctattgaatttaacctcgtctaagagaga 303  Q
    | ||||||| ||| | || ||||| || || |||||||||||||||||||||||||  || || ||||||||| |||||||||||||||||||||||||     
T  19461372 ttagaagctatatcatcaccagaagctaca-gttgatcagaagattcaacctgaagtttcaaaagagctgtcttttgaatttaacctcgtctaagagagc 19461274  T
Q  304 gaaagactcaaaggaaggtgccaacgttcatt 335  Q
    ||| || | ||||| |||||||||||||||||    
T  19461273 gaaggattaaaagggaggtgccaacgttcatt 19461242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 16 - 335
Target Start/End: Complemental strand, 19559249 - 19558920
Alignment:
Q  16 taggcaaagttgatcaacataataggtcttggaagaacaaaagagagcaaatgaatcaacaagaagagaaacctaaaagcatctcaagaaatctgcatct 115  Q
    ||||||||||||||| |   ||||||||||||||||||||||||||||||| ||| || ||||||||| |||||||| |||||| |||||| |||| |||    
T  19559249 taggcaaagttgatctattcaataggtcttggaagaacaaaagagagcaaaggaaccatcaagaagaggaacctaaa-gcatctgaagaaaactgcgtct 19559151  T
Q  116 gaagtcta-aagtgcgtctgaagcca-aagtgcatctga-----tgacgtcatcagaagc--aaatccgtcagaagcaa-gaccttcagaagccatttgt 205  Q
    ||||| |  |||||| |||||||    |||||| |||||     |||| |||||||||||  |||  | |||||||||| |  | |||||||| | ||      
T  19559150 gaagttttgaagtgcttctgaagtttcaagtgcctctgaagtaatgacatcatcagaagccaaaactcatcagaagcaaagttcatcagaagcaacttca 19559051  T
Q  206 tcagaagctgtataa-catcagaatctgcaagttgatcagaagattcaacctgaagactctaa-gagctgtctattgaatttaacctcgtctaagagaga 303  Q
    | ||||||| ||| | || ||||| || || |||||||||||||||||||||||||  || || ||||||||| |||||||||||||||||||||||||     
T  19559050 ttagaagctatatcatcaccagaagctaca-gttgatcagaagattcaacctgaagtttcaaaagagctgtcttttgaatttaacctcgtctaagagagc 19558952  T
Q  304 gaaagactcaaaggaaggtgccaacgttcatt 335  Q
    ||| || | ||||| |||||||||||||||||    
T  19558951 gaaggattaaaagggaggtgccaacgttcatt 19558920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 235 - 335
Target Start/End: Original strand, 23271091 - 23271191
Alignment:
Q  235 agttgatcagaagattcaacctgaagactctaagagctgtctattgaatttaacctcgtctaagagagagaaagactcaaaggaaggtgccaacgttcat 334  Q
    ||||||||||||||||||||||||||  || ||||||||||| ||| |||||||||||||||||| || |||||||| ||||||||||||||||||||||    
T  23271091 agttgatcagaagattcaacctgaagtttcaaagagctgtcttttggatttaacctcgtctaagaaagcgaaagactaaaaggaaggtgccaacgttcat 23271190  T
Q  335 t 335  Q
    |    
T  23271191 t 23271191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 14 - 120
Target Start/End: Complemental strand, 28903870 - 28903764
Alignment:
Q  14 cataggcaaagttgatcaacat-aataggtcttggaagaacaaaagagagcaaatgaatcaacaagaagagaaacctaaaagcatctcaagaaatctgca 112  Q
    ||||| |||||||||||||  | ||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||| |||||| ||||     
T  28903870 catagacaaagttgatcaaatttaataggtcttggaagaacaaaagagagcaaaggaatcaacaagaagagaaacct-aaagcatctgaagaaaactgcg 28903772  T
Q  113 tctgaagt 120  Q
    ||||||||    
T  28903771 tctgaagt 28903764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 39 - 120
Target Start/End: Complemental strand, 21541351 - 21541271
Alignment:
Q  39 aggtcttggaagaacaaaagagagcaaatgaatcaacaagaagagaaacctaaaagcatctcaagaaatctgcatctgaagt 120  Q
    |||||||||||||||||||||||||||| |||||||||| ||||||| ||| ||||||||| ||||||||||| ||||||||    
T  21541351 aggtcttggaagaacaaaagagagcaaaggaatcaacaaaaagagaagcct-aaagcatctgaagaaatctgcctctgaagt 21541271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 235 - 335
Target Start/End: Original strand, 7018268 - 7018368
Alignment:
Q  235 agttgatcagaagattcaacctgaagactctaagagctgtctattgaatttaacctcgtctaagagagagaaagactcaaaggaaggtgccaacgttcat 334  Q
    |||||||||||||||||||||||||||||||||||| |||||  || |||||| | |||||||||||| ||||||   | ||| ||||||||||||||||    
T  7018268 agttgatcagaagattcaacctgaagactctaagagttgtctcctggatttaaacccgtctaagagagcgaaagagaaagagggaggtgccaacgttcat 7018367  T
Q  335 t 335  Q
    |    
T  7018368 t 7018368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 36 - 77
Target Start/End: Complemental strand, 16189364 - 16189323
Alignment:
Q  36 aataggtcttggaagaacaaaagagagcaaatgaatcaacaa 77  Q
    |||||||  |||||||||||||||||||||||||||||||||    
T  16189364 aataggttctggaagaacaaaagagagcaaatgaatcaacaa 16189323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 36 - 77
Target Start/End: Original strand, 18120910 - 18120951
Alignment:
Q  36 aataggtcttggaagaacaaaagagagcaaatgaatcaacaa 77  Q
    |||||||  |||||||||||||||||||||||||||||||||    
T  18120910 aataggttctggaagaacaaaagagagcaaatgaatcaacaa 18120951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 235 - 296
Target Start/End: Original strand, 22135745 - 22135806
Alignment:
Q  235 agttgatcagaagattcaacctgaagactctaagagctgtctattgaatttaacctcgtcta 296  Q
    ||||||||||||||||||| |||||  ||| ||||||||||| ||||| |||| ||||||||    
T  22135745 agttgatcagaagattcaatctgaaatctcaaagagctgtctcttgaagttaatctcgtcta 22135806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 235 - 296
Target Start/End: Original strand, 22166910 - 22166971
Alignment:
Q  235 agttgatcagaagattcaacctgaagactctaagagctgtctattgaatttaacctcgtcta 296  Q
    ||||||||||||||||||| |||||  ||| ||||||||||| ||||| |||| ||||||||    
T  22166910 agttgatcagaagattcaatctgaaatctcaaagagctgtctcttgaagttaatctcgtcta 22166971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 142 - 219
Target Start/End: Original strand, 45567762 - 45567839
Alignment:
Q  142 agtgcatctgatgacgtcatcagaagcaaatccgtcagaagcaagaccttcagaagccatttgttcagaagctgtata 219  Q
    |||||| ||||||||||||||||||| || | | ||||||||||| |  |||||||| ||||  ||||||||||||||    
T  45567762 agtgcacctgatgacgtcatcagaagtaagttcatcagaagcaagtctatcagaagctatttcctcagaagctgtata 45567839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 45 - 77
Target Start/End: Complemental strand, 16207611 - 16207579
Alignment:
Q  45 tggaagaacaaaagagagcaaatgaatcaacaa 77  Q
    |||||||||||||||||||||||||||||||||    
T  16207611 tggaagaacaaaagagagcaaatgaatcaacaa 16207579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 14 - 72
Target Start/End: Original strand, 20259303 - 20259362
Alignment:
Q  14 cataggcaaagttgatcaacat-aataggtcttggaagaacaaaagagagcaaatgaatc 72  Q
    ||||||||||||| |||||  | |||||||||||||||||||| |||||||||| |||||    
T  20259303 cataggcaaagttaatcaatttcaataggtcttggaagaacaatagagagcaaaggaatc 20259362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 14 - 72
Target Start/End: Original strand, 21045933 - 21045992
Alignment:
Q  14 cataggcaaagttgatcaacat-aataggtcttggaagaacaaaagagagcaaatgaatc 72  Q
    ||||||||||||| |||||  | |||||||||||||||||||| |||||||||| |||||    
T  21045933 cataggcaaagttaatcaatttcaataggtcttggaagaacaatagagagcaaaggaatc 21045992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 92 - 169
Target Start/End: Original strand, 20160977 - 20161058
Alignment:
Q  92 aagcatctcaagaaatctgcatctgaagtctaaagtgcgtctgaagccaaagtgcatc-----tgatgacgtcatcagaagca 169  Q
    |||||||| |||||| |||| ||||||| ||||||||| ||||||||  |||||||||     ||||||||||||||||||||    
T  20160977 aagcatctgaagaaaactgcgtctgaag-ctaaagtgcttctgaagctgaagtgcatctgaagtgatgacgtcatcagaagca 20161058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 92 - 169
Target Start/End: Complemental strand, 20196490 - 20196409
Alignment:
Q  92 aagcatctcaagaaatctgcatctgaagtctaaagtgcgtctgaagccaaagtgcatctga-----tgacgtcatcagaagca 169  Q
    |||||||| |||||| |||| ||||||| ||||||||| ||||||||  ||||||||||||     |||||||||||||||||    
T  20196490 aagcatctgaagaaaactgcgtctgaag-ctaaagtgcttctgaagctgaagtgcatctgaagtgatgacgtcatcagaagca 20196409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 132 - 228
Target Start/End: Complemental strand, 21541242 - 21541149
Alignment:
Q  132 ctgaagccaaagtgcatctgatgacgtcatcagaagcaaatccgtcagaagcaagaccttcagaagccatttgttcagaagctgtataacatcagaa 228  Q
    |||||| |||| |||| |||||||||||||||||||| | | | |||||||||||   |||| |||| ||||  |||||||||||||| || |||||    
T  21541242 ctgaagacaaaatgcacctgatgacgtcatcagaagcgagttcatcagaagcaag---ttcataagctatttcatcagaagctgtatatcaccagaa 21541149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 39 - 111
Target Start/End: Complemental strand, 1238031 - 1237960
Alignment:
Q  39 aggtcttggaagaacaaaagagagcaaatgaatcaacaagaagagaaacctaaaagcatctcaagaaatctgc 111  Q
    ||||||||||||||||| | |||||||| |||||||||| ||| | || || ||||||||| |||||| ||||    
T  1238031 aggtcttggaagaacaataaagagcaaaggaatcaacaaaaag-ggaagcttaaagcatctgaagaaaactgc 1237960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 36 - 72
Target Start/End: Complemental strand, 3833314 - 3833278
Alignment:
Q  36 aataggtcttggaagaacaaaagagagcaaatgaatc 72  Q
    |||||||||||||||||||| |||||||||| |||||    
T  3833314 aataggtcttggaagaacaatagagagcaaaggaatc 3833278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 36 - 72
Target Start/End: Complemental strand, 3844094 - 3844058
Alignment:
Q  36 aataggtcttggaagaacaaaagagagcaaatgaatc 72  Q
    |||||||||||||||||||| |||||||||| |||||    
T  3844094 aataggtcttggaagaacaatagagagcaaaggaatc 3844058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 36 - 72
Target Start/End: Complemental strand, 3844385 - 3844349
Alignment:
Q  36 aataggtcttggaagaacaaaagagagcaaatgaatc 72  Q
    |||||||||||||||||||| |||||||||| |||||    
T  3844385 aataggtcttggaagaacaatagagagcaaaggaatc 3844349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 45 - 77
Target Start/End: Complemental strand, 17267827 - 17267795
Alignment:
Q  45 tggaagaacaaaagagagcaaatgaatcaacaa 77  Q
    |||||||||||||||||||||| ||||||||||    
T  17267827 tggaagaacaaaagagagcaaaggaatcaacaa 17267795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 36 - 72
Target Start/End: Original strand, 22211096 - 22211132
Alignment:
Q  36 aataggtcttggaagaacaaaagagagcaaatgaatc 72  Q
    |||||||||||||||||||| |||||||||| |||||    
T  22211096 aataggtcttggaagaacaatagagagcaaaggaatc 22211132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 45 - 77
Target Start/End: Complemental strand, 39693891 - 39693859
Alignment:
Q  45 tggaagaacaaaagagagcaaatgaatcaacaa 77  Q
    ||||||||| |||||||||||||||||||||||    
T  39693891 tggaagaacgaaagagagcaaatgaatcaacaa 39693859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010 (Bit Score: 153; Significance: 5e-81; HSPs: 2)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 153; E-Value: 5e-81
Query Start/End: Original strand, 14 - 322
Target Start/End: Complemental strand, 117685 - 117378
Alignment:
Q  14 cataggcaaagttgatcaacataataggtcttggaagaacaaaagagagcaaatgaatcaacaagaagagaaacctaaaagcatctcaagaaatctgcat 113  Q
    ||||| ||||||| |||||  ||||||||||||||||||||||||||||| ||  |||||||||||||||||||||| |||||||| ||||||||||| |    
T  117685 catagacaaagttcatcaatttaataggtcttggaagaacaaaagagagctaagaaatcaacaagaagagaaacctagaagcatctgaagaaatctgcct 117586  T
Q  114 ctgaagtctaaagtgcgtctgaagccaaagtgcatctgatgacgtcatcagaagcaaatccgtcagaagcaagaccttcagaagccatttgttcagaagc 213  Q
    |||||||  |||||||||||||||||||| |||||||||||||||||| |||||||||||  |||||||||||| ||| |||||||| || |||||||||    
T  117585 ctgaagttgaaagtgcgtctgaagccaaaatgcatctgatgacgtcattagaagcaaatctatcagaagcaagatctttagaagccaatttttcagaagc 117486  T
Q  214 tgtataacatcagaatctgcaagttgatcagaagattcaacctgaagactctaagagctgtctattgaatttaacctcgtctaagagagagaaagactca 313  Q
    ||||||||| ||||| ||| |||||||||||||||||||| || |||  || || || ||||||||  ||| |||||| ||||||| || |||||||| |    
T  117485 tgtataacaccagaaactg-aagttgatcagaagattcaatctaaagtttcaaatagatgtctattagattcaacctcatctaagaaagcgaaagactaa 117387  T
Q  314 aaggaaggt 322  Q
    | |||||||    
T  117386 agggaaggt 117378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010; HSP #2
Raw Score: 140; E-Value: 3e-73
Query Start/End: Original strand, 14 - 331
Target Start/End: Complemental strand, 62124 - 61823
Alignment:
Q  14 cataggcaaagttgatcaacataataggtcttggaagaacaaaagagagcaaatgaatcaacaagaagagaaacctaaaagcatctcaagaaatctgcat 113  Q
    ||||| |||||||||||||  ||||||||||||||||||||||||||||| || ||||||||||||||||||||||| |||||||| ||||||| ||| |    
T  62124 catagacaaagttgatcaatttaataggtcttggaagaacaaaagagagctaaggaatcaacaagaagagaaacctagaagcatctgaagaaatatgcct 62025  T
Q  114 ctgaagtctaaagtgcgtctgaagccaaagtgcatctgatgacgtcatcagaagcaaatccgtcagaagcaagaccttcagaagccatttgttcagaagc 213  Q
    |||||||  |||||||||||||||||||| |||||||||||||||||||||||               |||||| |||||||||||| ||||||||||||    
T  62024 ctgaagttgaaagtgcgtctgaagccaaaatgcatctgatgacgtcatcagaa---------------gcaagatcttcagaagccaattgttcagaagc 61940  T
Q  214 tgtataacatcagaatctgcaagttgatcagaagattcaacctgaagactctaagagctgtctattgaatttaacctcgtctaagagagagaaagactca 313  Q
    ||||||||| || || ||| |||||||||||||||||||| ||||||  || || |||||||||||| ||| |||||| ||||||| || |||| ||| |    
T  61939 tgtataacaccaaaaactg-aagttgatcagaagattcaatctgaagtttcaaatagctgtctattggattcaacctcatctaagaaagcgaaatactaa 61841  T
Q  314 aaggaaggtgccaacgtt 331  Q
    | ||||||||||||||||    
T  61840 agggaaggtgccaacgtt 61823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 144; Significance: 1e-75; HSPs: 3)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 144; E-Value: 1e-75
Query Start/End: Original strand, 14 - 311
Target Start/End: Original strand, 481488 - 481769
Alignment:
Q  14 cataggcaaagttgatcaacataataggtcttggaagaacaaaagagagcaaatgaatcaacaagaagagaaacctaaaagcatctcaagaaatctgcat 113  Q
    ||||| ||||||| |||||  ||| |||||||||||||||||||||||||||| |||||||| |||||||||||||| |||||||| ||||||||||| |    
T  481488 catagacaaagttaatcaatttaaaaggtcttggaagaacaaaagagagcaaaggaatcaacgagaagagaaacctagaagcatctgaagaaatctgcct 481587  T
Q  114 ctgaagtctaaagtgcgtctgaagccaaagtgcatctgatgacgtcatcagaagcaaatccgtcagaagcaagaccttcagaagccatttgttcagaagc 213  Q
    |||||||  |||||||||||||||||||| |||||||||||||||||               ||||||||||||||||||||||||| ||||||||||||    
T  481588 ctgaagttgaaagtgcgtctgaagccaaaatgcatctgatgacgtca---------------tcagaagcaagaccttcagaagccaattgttcagaagc 481672  T
Q  214 tgtataacatcagaatctgcaagttgatcagaagattcaacctgaagactctaagagctgtctattgaatttaacctcgtctaagagagagaaagact 311  Q
    ||||||||||||||| ||| ||||| |||||||||||||||||||||  || || |||||||||||| ||| |||||||||||||| || ||||||||    
T  481673 tgtataacatcagaaactg-aagttaatcagaagattcaacctgaagtttcaaatagctgtctattggattcaacctcgtctaagaaagcgaaagact 481769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002; HSP #2
Raw Score: 140; E-Value: 3e-73
Query Start/End: Original strand, 35 - 329
Target Start/End: Original strand, 156350 - 156643
Alignment:
Q  35 taataggtcttggaagaacaaaagagagcaaatgaatcaacaagaagagaaacctaaaagcatctcaagaaatctgcatctgaagtctaaagtgcgtctg 134  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||| ||||||||||| ||||||||  ||||||| ||||    
T  156350 taataggtcttggaagaacaaaagagagcaaaggaatcaacaagaagagaaacct-aaagcatctgaagaaatctgcctctgaagttgaaagtgcttctg 156448  T
Q  135 aagccaaagtgcatctgatgacgtcatcagaagcaaatccgtcagaagcaagaccttcagaagcc-atttgttcagaagctgtataacatcagaatctgc 233  Q
    |||||||| |||||||||||||||||||| |||  | |   ||||||||||| |||||||||||| ||||| |||||||||||||| |  ||||| |||     
T  156449 aagccaaaatgcatctgatgacgtcatcaaaagtgagtttatcagaagcaagtccttcagaagccaatttgatcagaagctgtatatcgccagaaactg- 156547  T
Q  234 aagttgatcagaagattcaacctgaagactctaagagctgtctattgaatttaacctcgtctaagagagagaaagactcaaaggaaggtgccaacg 329  Q
    |||||||||||||||| ||||||||||  || || |||||||||||| ||| |||||||||||||| || |||||||| || | |||||| |||||    
T  156548 aagttgatcagaagatgcaacctgaagtttcaaatagctgtctattggattcaacctcgtctaagaaagcgaaagactaaaggaaaggtggcaacg 156643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002; HSP #3
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 36 - 72
Target Start/End: Complemental strand, 117657 - 117621
Alignment:
Q  36 aataggtcttggaagaacaaaagagagcaaatgaatc 72  Q
    |||||||||||||||||||| |||||||||| |||||    
T  117657 aataggtcttggaagaacaatagagagcaaaggaatc 117621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0655 (Bit Score: 140; Significance: 3e-73; HSPs: 1)
Name: scaffold0655
Description:

Target: scaffold0655; HSP #1
Raw Score: 140; E-Value: 3e-73
Query Start/End: Original strand, 35 - 329
Target Start/End: Complemental strand, 5504 - 5211
Alignment:
Q  35 taataggtcttggaagaacaaaagagagcaaatgaatcaacaagaagagaaacctaaaagcatctcaagaaatctgcatctgaagtctaaagtgcgtctg 134  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||| |||| |||||| ||||||||  ||||||| ||||    
T  5504 taataggtcttggaagaacaaaagagagcaaaggaatcaacaagaagagaaacct-aaagcatctgaagatatctgcctctgaagttgaaagtgcttctg 5406  T
Q  135 aagccaaagtgcatctgatgacgtcatcagaagcaaatccgtcagaagcaagaccttcagaagcc-atttgttcagaagctgtataacatcagaatctgc 233  Q
    |||||||| ||||||||||||||||||||||||  | |   ||||||||||| |||||||||||| ||||| ||||||| |||||| || ||||| |||     
T  5405 aagccaaaatgcatctgatgacgtcatcagaagtgagtttatcagaagcaagtccttcagaagccaatttgatcagaagttgtatatcaccagaaactg- 5307  T
Q  234 aagttgatcagaagattcaacctgaagactctaagagctgtctattgaatttaacctcgtctaagagagagaaagactcaaaggaaggtgccaacg 329  Q
    |||||||||||||||| ||||||||||  || || |||| ||||||| ||| |||||||||||||| || |||||||| || |||||||| |||||    
T  5306 aagttgatcagaagatgcaacctgaagtttcaaatagctttctattggattcaacctcgtctaagaaagcgaaagactaaagggaaggtggcaacg 5211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 107; Significance: 1e-53; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 14 - 329
Target Start/End: Original strand, 6214 - 6539
Alignment:
Q  14 cataggcaaagttgatcaacat-aataggtcttggaagaacaaaagagagcaaatgaatcaacaagaagagaaacctaaaagcatctcaagaaatctgca 112  Q
    ||||| |||||||||||||  | ||||||||||||||||||||||||||||||| |||||||||| |||||||||||||| |||||| |||||||||||     
T  6214 catagacaaagttgatcaaatttaataggtcttggaagaacaaaagagagcaaaggaatcaacaa-aagagaaacctaaa-gcatctgaagaaatctgct 6311  T
Q  113 tctgaagtctaaagtgcgtctgaagccaaagtgcatctgatgacgtcatcagaagcaa----atccg--------tcagaagcaagaccttcagaagcca 200  Q
    ||||||||  |||||||  ||||||||||| ||||||||||||||||||||||||  |    ||| |        |||| |||||| |||||||||||||    
T  6312 tctgaagttgaaagtgctcctgaagccaaaatgcatctgatgacgtcatcagaagtgagattatcagaagcaagttcagtagcaagtccttcagaagcca 6411  T
Q  201 tttgttcagaagctgtataacatcagaatctgcaagttgatcagaagattcaacctgaagactctaagagctgtctattgaatttaacctcgtctaagag 300  Q
    |||| |||||||||||||| || ||||| ||| ||||| |||||||||| ||||||||||  || || |||||| ||||| ||| |||||| |||||||     
T  6412 tttgatcagaagctgtatatcaccagaaactg-aagttcatcagaagatgcaacctgaagtttcaaatagctgtttattggattcaacctcttctaagat 6510  T
Q  301 agagaaagactcaaaggaaggtgccaacg 329  Q
    || |||||||| || | |||||| |||||    
T  6511 agcgaaagactaaaggaaaggtggcaacg 6539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 92; Significance: 1e-44; HSPs: 2)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 14 - 335
Target Start/End: Original strand, 40008 - 40337
Alignment:
Q  14 cataggcaaagttgatcaacataataggtcttggaagaacaaaagagagcaaatgaatcaacaagaagagaaacctaaaagcatctcaagaaatctgcat 113  Q
    |||||||||||||||||||  ||||||||||||||||||||||||||||||||  ||||| ||||||||| ||||| ||||||||| |||||| |||| |    
T  40008 cataggcaaagttgatcaatttaataggtcttggaagaacaaaagagagcaaagaaatcatcaagaagaggaacct-aaagcatctgaagaaaactgcgt 40106  T
Q  114 ctgaag-tctaaagtgcgtctgaag-ccaaagtgcatctg-----atgacgtcatcagaagca-aatccgtcagaagc-aagaccttcagaagccatttg 204  Q
    |||||| | |||||||| |||||||    |||||| ||||     |||||||||||||||||| ||  | |||||||| |||  | |||||||| | ||     
T  40107 ctgaagttttaaagtgcttctgaagtttcaagtgcctctgaagtaatgacgtcatcagaagcagaactcatcagaagcaaagttcatcagaagcaacttc 40206  T
Q  205 ttcagaagctgtat-aacatcagaatctgcaagttgatcagaagattcaacctgaagactctaagagctgtctattgaatttaacctcgtctaagagaga 303  Q
     ||||||||| ||| |  | ||||| || | ||||||||||||||||||| ||||||  || ||  ||||| ||||| |||||||||| ||||||||||     
T  40207 gtcagaagctatatcattaccagaagctac-agttgatcagaagattcaatctgaagtttcaaatggctgtttattggatttaacctcatctaagagagt 40305  T
Q  304 gaaagactcaaaggaaggtgccaacgttcatt 335  Q
    ||||||||||||||||||||||||||||||||    
T  40306 gaaagactcaaaggaaggtgccaacgttcatt 40337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017; HSP #2
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 235 - 335
Target Start/End: Original strand, 58783 - 58883
Alignment:
Q  235 agttgatcagaagattcaacctgaagactctaagagctgtctattgaatttaacctcgtctaagagagagaaagactcaaaggaaggtgccaacgttcat 334  Q
    ||||||||||||||||||| ||||||  || ||  ||||| ||||| ||||||||||||||||||||| |||||||||||| ||||||||||||||||||    
T  58783 agttgatcagaagattcaatctgaagtttcaaatggctgtttattggatttaacctcgtctaagagagcgaaagactcaaacgaaggtgccaacgttcat 58882  T
Q  335 t 335  Q
    |    
T  58883 t 58883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1321 (Bit Score: 83; Significance: 3e-39; HSPs: 1)
Name: scaffold1321
Description:

Target: scaffold1321; HSP #1
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 14 - 329
Target Start/End: Original strand, 626 - 952
Alignment:
Q  14 cataggcaaagttgatcaacat-aataggtcttggaagaacaaaagagagcaaatgaatcaacaagaagagaaacctaaaagcatctcaagaaatctgca 112  Q
    ||||| |||||||||||||  | ||||||||||| || |||||||||||||||| |||||||||| ||||||||||| ||||||||| |||||||||||     
T  626 catagacaaagttgatcaaatttaataggtcttgtaaaaacaaaagagagcaaaggaatcaacaaaaagagaaacct-aaagcatctgaagaaatctgcc 724  T
Q  113 tctgaagtctaaagtgcgtctgaagccaaagtgcatctgatgacgtcatcagaagcaa----atccg--------tcagaagcaagaccttcagaagcca 200  Q
    ||||||||  ||| |||   |||||| ||| ||||||||||||| ||||||||||  |    ||| |        |||| |||||| |||||||||||||    
T  725 tctgaagttgaaaatgctcttgaagctaaaatgcatctgatgacatcatcagaagtgagattatcagaagcaagttcagtagcaagtccttcagaagcca 824  T
Q  201 tttgttcagaagctgtataacatcagaatctgcaagttgatcagaagattcaacctgaagactctaagagctgtctattgaatttaacctcgtctaagag 300  Q
    |||| |||||| ||||||| |||||||| ||| ||||| |||||||||| ||||||||||  || || |||||| ||||| ||| |||||  |||||||     
T  825 tttgatcagaaactgtatatcatcagaaactg-aagttcatcagaagatgcaacctgaagtttcaaatagctgtttattggattcaaccttttctaagat 923  T
Q  301 agagaaagactcaaaggaaggtgccaacg 329  Q
    || |||||||| || | |||||| |||||    
T  924 agcgaaagactaaaggaaaggtggcaacg 952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1263 (Bit Score: 83; Significance: 3e-39; HSPs: 1)
Name: scaffold1263
Description:

Target: scaffold1263; HSP #1
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 14 - 329
Target Start/End: Original strand, 819 - 1145
Alignment:
Q  14 cataggcaaagttgatcaacat-aataggtcttggaagaacaaaagagagcaaatgaatcaacaagaagagaaacctaaaagcatctcaagaaatctgca 112  Q
    ||||| |||||||||||||  | ||||||||||| || |||||||||||||||| |||||||||| ||||||||||| ||||||||| |||||||||||     
T  819 catagacaaagttgatcaaatttaataggtcttgtaaaaacaaaagagagcaaaggaatcaacaaaaagagaaacct-aaagcatctgaagaaatctgcc 917  T
Q  113 tctgaagtctaaagtgcgtctgaagccaaagtgcatctgatgacgtcatcagaagcaa----atccg--------tcagaagcaagaccttcagaagcca 200  Q
    ||||||||  ||| |||   |||||| ||| ||||||||||||| ||||||||||  |    ||| |        |||| |||||| |||||||||||||    
T  918 tctgaagttgaaaatgctcttgaagctaaaatgcatctgatgacatcatcagaagtgagattatcagaagcaagttcagtagcaagtccttcagaagcca 1017  T
Q  201 tttgttcagaagctgtataacatcagaatctgcaagttgatcagaagattcaacctgaagactctaagagctgtctattgaatttaacctcgtctaagag 300  Q
    |||| |||||| ||||||| |||||||| ||| ||||| |||||||||| ||||||||||  || || |||||| ||||| ||| |||||  |||||||     
T  1018 tttgatcagaaactgtatatcatcagaaactg-aagttcatcagaagatgcaacctgaagtttcaaatagctgtttattggattcaaccttttctaagat 1116  T
Q  301 agagaaagactcaaaggaaggtgccaacg 329  Q
    || |||||||| || | |||||| |||||    
T  1117 agcgaaagactaaaggaaaggtggcaacg 1145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 76; Significance: 4e-35; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 14 - 335
Target Start/End: Original strand, 7311 - 7642
Alignment:
Q  14 cataggcaaagttgatcaacataataggtcttggaagaacaaaagagagcaaatgaatcaacaagaagagaaacctaaaagcatctcaagaaatctgcat 113  Q
    |||||||||||||||||||  ||||||||||||||||||||||||||||||||  ||||| ||||||||  ||||| ||||||| | |||||| |||| |    
T  7311 cataggcaaagttgatcaatttaataggtcttggaagaacaaaagagagcaaagaaatcatcaagaagaagaacct-aaagcatttgaagaaaactgcgt 7409  T
Q  114 ctgaagtc---taaagtgcgtctgaag-ccaaagtgcatctg-----atgacgtcatcagaagcaaatc-cgtcagaagc-aagaccttcagaagccatt 202  Q
    ||||||||   | |||||| |||||||    |||||| ||||     ||||| |||||||||||||| | | |||||||| |||  | |||||||| | |    
T  7410 ctgaagtcttttgaagtgcttctgaagtttcaagtgcctctgaagtaatgacatcatcagaagcaaaactcatcagaagcaaagttcatcagaagcaact 7509  T
Q  203 tgttcagaagctgtat-aacatcagaatctgcaagttgatcagaagattcaacctgaagactctaagagctgtctattgaatttaacctcgtctaagaga 301  Q
    |  ||||||||| |||   |||||||| || | ||||||||||||||||||| ||||||  || ||  | ||| ||||| ||||||||| |||||||| |    
T  7510 tcatcagaagctatatcgtcatcagaagctac-agttgatcagaagattcaatctgaagtttcaaatggttgtttattggatttaaccttgtctaagaaa 7608  T
Q  302 gagaaagactcaaaggaaggtgccaacgttcatt 335  Q
    | ||||||||||||||||||||||||||||||||    
T  7609 gcgaaagactcaaaggaaggtgccaacgttcatt 7642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0185 (Bit Score: 72; Significance: 1e-32; HSPs: 1)
Name: scaffold0185
Description:

Target: scaffold0185; HSP #1
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 14 - 335
Target Start/End: Complemental strand, 9712 - 9383
Alignment:
Q  14 cataggcaaagttgatcaacataataggtcttggaagaacaaaagagagcaaatgaatcaacaagaagagaaacctaaaagcatctcaagaaatctgcat 113  Q
    ||||| |||||||||||||  |||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||| |||||| |||  |    
T  9712 catagacaaagttgatcaatttaataggtcttggaagaacaaaagagagcaaaggaatcaacaagaagagaaacct-aaagcatctgaagaaaactgtgt 9614  T
Q  114 ctgaag-tctaaagtgcgtctgaag-ccaaagtgcatct-----gatgacgtcatcagaagca-aatccgtcagaagc-aagaccttcagaagccatttg 204  Q
    |||||| | | |||||| |||||||    |||||| |||     ||||||||||||||||||| ||  |  ||||||| |||  | |||||||| | ||     
T  9613 ctgaagttttgaagtgcttctgaagtttcaagtgcctctgatgagatgacgtcatcagaagcagaactcaccagaagcaaagttcatcagaagcaacttc 9514  T
Q  205 ttcagaagctgtat-aacatcagaatctgcaagttgatcagaagattcaacctgaagactctaagagctgtctattgaatttaacctcgtctaagagaga 303  Q
     ||||||||| ||| | || ||||| || | ||||||| || |||||| ||||||||  || || |||||| ||||| ||| |||||| ||||||| ||     
T  9513 atcagaagctatatcatcaccagaagctac-agttgattagtagattctacctgaagtttcaaatagctgtttattggattcaacctcatctaagaaagc 9415  T
Q  304 gaaagactcaaaggaaggtgccaacgttcatt 335  Q
    |||||||| || ||||||||||||||||||||    
T  9414 gaaagactaaatggaaggtgccaacgttcatt 9383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0280 (Bit Score: 71; Significance: 4e-32; HSPs: 2)
Name: scaffold0280
Description:

Target: scaffold0280; HSP #1
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 14 - 120
Target Start/End: Original strand, 17501 - 17606
Alignment:
Q  14 cataggcaaagttgatcaacataataggtcttggaagaacaaaagagagcaaatgaatcaacaagaagagaaacctaaaagcatctcaagaaatctgcat 113  Q
    ||||| |||||||||||||  |||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||| |||||| |||| |    
T  17501 catagacaaagttgatcaatttaataggtcttggaagaacaaaagagagcaaaggaatcaacaagaagagaaacct-aaagcatctgaagaaaactgcgt 17599  T
Q  114 ctgaagt 120  Q
    |||||||    
T  17600 ctgaagt 17606  T

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Target: scaffold0280; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 235 - 335
Target Start/End: Original strand, 17730 - 17830
Alignment:
Q  235 agttgatcagaagattcaacctgaagactctaagagctgtctattgaatttaacctcgtctaagagagagaaagactcaaaggaaggtgccaacgttcat 334  Q
    ||||||| || |||||| ||||||||  || || || ||| ||||| ||| |||||| ||||||| || |||||||| ||||||||||||||||||||||    
T  17730 agttgattagtagattctacctgaagtttcaaatagttgtttattggattcaacctcatctaagaaagcgaaagactaaaaggaaggtgccaacgttcat 17829  T
Q  335 t 335  Q
    |    
T  17830 t 17830  T

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Target: scaffold0544 (Bit Score: 53; Significance: 2e-21; HSPs: 2)
Name: scaffold0544
Description:

Target: scaffold0544; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 14 - 137
Target Start/End: Original strand, 9596 - 9719
Alignment:
Q  14 cataggcaaagttgatcaacat-aataggtcttggaagaacaaaagagagcaaatgaatcaacaagaagagaaacctaaaagcatctcaagaaatctgca 112  Q
    ||||||||||||| |||||  | ||||||||||||||||||||||||||||||| ||  || ||||||||| ||||| ||||||||| |||||| ||||     
T  9596 cataggcaaagttaatcaatttcaataggtcttggaagaacaaaagagagcaaaggacccatcaagaagaggaacct-aaagcatctgaagaaaactgcg 9694  T
Q  113 tctgaagtctaaagtgcgtctgaag 137  Q
    |||||||| | |||||| |||||||    
T  9695 tctgaagtttcaagtgcctctgaag 9719  T

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Target: scaffold0544; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 266 - 335
Target Start/End: Original strand, 9826 - 9895
Alignment:
Q  266 aagagctgtctattgaatttaacctcgtctaagagagagaaagactcaaaggaaggtgccaacgttcatt 335  Q
    ||||||||||| || || ||||||||||||||||||| ||| ||   ||||| | |||||||||||||||    
T  9826 aagagctgtctctttaagttaacctcgtctaagagagcgaaggatcaaaagggaagtgccaacgttcatt 9895  T

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Target: scaffold0254 (Bit Score: 53; Significance: 2e-21; HSPs: 2)
Name: scaffold0254
Description:

Target: scaffold0254; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 235 - 335
Target Start/End: Complemental strand, 22227 - 22127
Alignment:
Q  235 agttgatcagaagattcaacctgaagactctaagagctgtctattgaatttaacctcgtctaagagagagaaagactcaaaggaaggtgccaacgttcat 334  Q
    |||||||||||||||||||  |||||  || ||  ||||| |||||  |||||||||||||||||||| |||||||||||||||||||| ||||||||||    
T  22227 agttgatcagaagattcaatttgaagtttcaaatggctgtttattggttttaacctcgtctaagagagcgaaagactcaaaggaaggtgtcaacgttcat 22128  T
Q  335 t 335  Q
    |    
T  22127 t 22127  T

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Target: scaffold0254; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 50 - 120
Target Start/End: Complemental strand, 22404 - 22335
Alignment:
Q  50 gaacaaaagagagcaaatgaatcaacaagaagagaaacctaaaagcatctcaagaaatctgcatctgaagt 120  Q
    |||||||||||||||||  ||||| ||||||||| ||||| ||||||||| |||||| |||| ||||||||    
T  22404 gaacaaaagagagcaaagaaatcatcaagaagaggaacct-aaagcatctgaagaaaactgcgtctgaagt 22335  T

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Target: scaffold0269 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0269
Description:

Target: scaffold0269; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 39 - 120
Target Start/End: Complemental strand, 7679 - 7599
Alignment:
Q  39 aggtcttggaagaacaaaagagagcaaatgaatcaacaagaagagaaacctaaaagcatctcaagaaatctgcatctgaagt 120  Q
    |||||||||||||| ||||||||||||| |||||||||| ||||||| ||| ||||||||| ||||||||||| ||||||||    
T  7679 aggtcttggaagaaaaaaagagagcaaaggaatcaacaaaaagagaagcct-aaagcatctgaagaaatctgcctctgaagt 7599  T

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Target: scaffold0090 (Bit Score: 50; Significance: 1e-19; HSPs: 4)
Name: scaffold0090
Description:

Target: scaffold0090; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 14 - 119
Target Start/End: Complemental strand, 5589 - 5485
Alignment:
Q  14 cataggcaaagttgatcaacataataggtcttggaagaacaaaagagagcaaatgaatcaacaagaagagaaacctaaaagcatctcaagaaatctgcat 113  Q
    ||||| ||||||||| |||   ||||||||||||||||||||||||||||||| ||| || ||||||||| ||||| ||||||||| |||||| |||| |    
T  5589 catagacaaagttgaccaattcaataggtcttggaagaacaaaagagagcaaaggaaccatcaagaagaggaacct-aaagcatctgaagaaaactgcgt 5491  T
Q  114 ctgaag 119  Q
    ||||||    
T  5490 ctgaag 5485  T

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Target: scaffold0090; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 36 - 119
Target Start/End: Complemental strand, 1187 - 1105
Alignment:
Q  36 aataggtcttggaagaacaaaagagagcaaatgaatcaacaagaagagaaacctaaaagcatctcaagaaatctgcatctgaag 119  Q
    ||||||||||||||||||||||||||||||| ||| || ||||||||| ||||| ||||||||| |||||| |||| |||||||    
T  1187 aataggtcttggaagaacaaaagagagcaaaggaaccatcaagaagaggaacct-aaagcatctgaagaaaactgcgtctgaag 1105  T

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Target: scaffold0090; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 266 - 335
Target Start/End: Complemental strand, 979 - 910
Alignment:
Q  266 aagagctgtctattgaatttaacctcgtctaagagagagaaagactcaaaggaaggtgccaacgttcatt 335  Q
    ||||||||||| ||||||||||||||||||||||||| ||| ||   ||||| ||||| |||||||||||    
T  979 aagagctgtctcttgaatttaacctcgtctaagagagcgaaggatcaaaagggaggtgtcaacgttcatt 910  T

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Target: scaffold0090; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 266 - 335
Target Start/End: Complemental strand, 5359 - 5290
Alignment:
Q  266 aagagctgtctattgaatttaacctcgtctaagagagagaaagactcaaaggaaggtgccaacgttcatt 335  Q
    ||||||||||| ||||||||||||||||||||||||| ||| ||   ||||| ||||| |||||||||||    
T  5359 aagagctgtctcttgaatttaacctcgtctaagagagcgaaggatcaaaagggaggtgtcaacgttcatt 5290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0050 (Bit Score: 47; Significance: 8e-18; HSPs: 1)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 14 - 92
Target Start/End: Complemental strand, 35600 - 35522
Alignment:
Q  14 cataggcaaagttgatcaacataataggtcttggaagaacaaaagagagcaaatgaatcaacaagaagagaaacctaaa 92  Q
    ||||| ||||||||||||   ||| |||||||||||||||||||||||||||| |||||||||| ||||||| ||||||    
T  35600 catagacaaagttgatcattttaaaaggtcttggaagaacaaaagagagcaaaggaatcaacaaaaagagaagcctaaa 35522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0908 (Bit Score: 46; Significance: 3e-17; HSPs: 1)
Name: scaffold0908
Description:

Target: scaffold0908; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 39 - 120
Target Start/End: Original strand, 3611 - 3691
Alignment:
Q  39 aggtcttggaagaacaaaagagagcaaatgaatcaacaagaagagaaacctaaaagcatctcaagaaatctgcatctgaagt 120  Q
    |||||||||||||||||||||||||||| |||||||||| ||||||| ||| ||||||||  ||||||||||| | ||||||    
T  3611 aggtcttggaagaacaaaagagagcaaaggaatcaacaaaaagagaagcct-aaagcatccgaagaaatctgcctatgaagt 3691  T

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Target: scaffold0207 (Bit Score: 46; Significance: 3e-17; HSPs: 4)
Name: scaffold0207
Description:

Target: scaffold0207; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 39 - 120
Target Start/End: Complemental strand, 21011 - 20931
Alignment:
Q  39 aggtcttggaagaacaaaagagagcaaatgaatcaacaagaagagaaacctaaaagcatctcaagaaatctgcatctgaagt 120  Q
    ||||||||||||||||| ||||||||||| | ||||||| ||||||| ||| ||||||||| ||||||||||| ||||||||    
T  21011 aggtcttggaagaacaatagagagcaaataattcaacaaaaagagaagcct-aaagcatctgaagaaatctgcctctgaagt 20931  T

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Target: scaffold0207; HSP #2
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 132 - 167
Target Start/End: Complemental strand, 11001 - 10966
Alignment:
Q  132 ctgaagccaaagtgcatctgatgacgtcatcagaag 167  Q
    ||||||||||| ||||||||||||||||||||||||    
T  11001 ctgaagccaaaatgcatctgatgacgtcatcagaag 10966  T

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Target: scaffold0207; HSP #3
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 132 - 167
Target Start/End: Complemental strand, 20902 - 20867
Alignment:
Q  132 ctgaagccaaagtgcatctgatgacgtcatcagaag 167  Q
    ||||||||||| ||||||||||||||||||||||||    
T  20902 ctgaagccaaaatgcatctgatgacgtcatcagaag 20867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0207; HSP #4
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 39 - 92
Target Start/End: Complemental strand, 11110 - 11057
Alignment:
Q  39 aggtcttggaagaacaaaagagagcaaatgaatcaacaagaagagaaacctaaa 92  Q
    |||||||||||||||||  |||||||||| | ||||||| ||||||| ||||||    
T  11110 aggtcttggaagaacaattgagagcaaataattcaacaaaaagagaagcctaaa 11057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0752 (Bit Score: 44; Significance: 5e-16; HSPs: 1)
Name: scaffold0752
Description:

Target: scaffold0752; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 36 - 119
Target Start/End: Complemental strand, 2394 - 2312
Alignment:
Q  36 aataggtcttggaagaacaaaagagagcaaatgaatcaacaagaagagaaacctaaaagcatctcaagaaatctgcatctgaag 119  Q
    ||||||||||||||||| ||||||||||||| ||| || ||||||||| ||||| ||||||||| |||||| |||| |||||||    
T  2394 aataggtcttggaagaataaaagagagcaaaggaaccatcaagaagagtaacct-aaagcatctgaagaaaactgcgtctgaag 2312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0422 (Bit Score: 44; Significance: 5e-16; HSPs: 1)
Name: scaffold0422
Description:

Target: scaffold0422; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 41 - 170
Target Start/End: Complemental strand, 12117 - 11983
Alignment:
Q  41 gtcttggaagaacaaaagagagcaaatgaatcaacaagaagagaaacctaaaagcatctcaagaaatctgcatctgaag-tctaaagtgcgtctgaagcc 139  Q
    |||| ||||||||||||||||| ||| |||||||||| ||||||| ||| ||||||||| |||||| |||| ||||||| | | ||||||  |||||| |    
T  12117 gtctcggaagaacaaaagagaggaaaggaatcaacaaaaagagaagcct-aaagcatctgaagaaaactgcgtctgaagttttgaagtgctcctgaagac 12019  T
Q  140 aaagtgcatc-----tgatgacgtcatcagaagcaa 170  Q
    ||||||| ||     |||||||||||||||||||||    
T  12018 aaagtgcctctgaagtgatgacgtcatcagaagcaa 11983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0073 (Bit Score: 42; Significance: 0.000000000000008; HSPs: 1)
Name: scaffold0073
Description:

Target: scaffold0073; HSP #1
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 235 - 335
Target Start/End: Complemental strand, 58666 - 58565
Alignment:
Q  235 agttgatcagaagattcaacctgaagactc-taagagctgtctattgaatttaacctcgtctaagagagagaaagactcaaaggaaggtgccaacgttca 333  Q
    ||||||||||||||||||| |||||  ||| |||||||||||| || || ||||||||||||||||||| ||| ||   ||||| | |||||||||||||    
T  58666 agttgatcagaagattcaatctgaaatctcataagagctgtctctttaagttaacctcgtctaagagagcgaacgatcaaaagggaagtgccaacgttca 58567  T
Q  334 tt 335  Q
    ||    
T  58566 tt 58565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 42; Significance: 0.000000000000008; HSPs: 2)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 235 - 335
Target Start/End: Original strand, 59183 - 59284
Alignment:
Q  235 agttgatcagaagattcaacctgaagactctaa-gagctgtctattgaatttaacctcgtctaagagagagaaagactcaaaggaaggtgccaacgttca 333  Q
    ||||||||||||||||||| |||||  ||| || ||||||||| |||||  |||||||||||||||||| ||| ||   ||||||| |||||||||||||    
T  59183 agttgatcagaagattcaatctgaaatctcaaaagagctgtctcttgaagataacctcgtctaagagagcgaaggatcaaaaggaaagtgccaacgttca 59282  T
Q  334 tt 335  Q
    ||    
T  59283 tt 59284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 36 - 72
Target Start/End: Original strand, 59005 - 59041
Alignment:
Q  36 aataggtcttggaagaacaaaagagagcaaatgaatc 72  Q
    |||||||||||||||||||| |||||||||| |||||    
T  59005 aataggtcttggaagaacaatagagagcaaaggaatc 59041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0211 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 1)
Name: scaffold0211
Description:

Target: scaffold0211; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 142 - 228
Target Start/End: Original strand, 15447 - 15533
Alignment:
Q  142 agtgcatctgatgacgtcatcagaagcaaatccgtcagaagcaagaccttcagaagccatttgttcagaagctgtataacatcagaa 228  Q
    |||||| |||||||||||||||||||||| | | ||||||||||| |  |||||||| ||||  |||||||||||||| || |||||    
T  15447 agtgcacctgatgacgtcatcagaagcaagttcatcagaagcaagtctatcagaagctatttcatcagaagctgtatatcaccagaa 15533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0547 (Bit Score: 38; Significance: 0.000000000002; HSPs: 2)
Name: scaffold0547
Description:

Target: scaffold0547; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 235 - 335
Target Start/End: Complemental strand, 1084 - 983
Alignment:
Q  235 agttgatcagaagattcaacctgaagactctaa-gagctgtctattgaatttaacctcgtctaagagagagaaagactcaaaggaaggtgccaacgttca 333  Q
    ||||||||||||||||||| |||||  ||| || ||| ||||| ||||| |||||||||||||||| || ||||||   ||||| || ||||||||||||    
T  1084 agttgatcagaagattcaatctgaaatctcaaaagagttgtctcttgaagttaacctcgtctaagaaagcgaaagatcgaaagggagttgccaacgttca 985  T
Q  334 tt 335  Q
    ||    
T  984 tt 983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0547; HSP #2
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 14 - 64
Target Start/End: Complemental strand, 1284 - 1233
Alignment:
Q  14 cataggcaaagttgatcaacat-aataggtcttggaagaacaaaagagagca 64  Q
    ||||||||||||| |||||  | |||||||||||||||||||||||||||||    
T  1284 cataggcaaagttaatcaatttcaataggtcttggaagaacaaaagagagca 1233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0485 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0485
Description:

Target: scaffold0485; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 36 - 77
Target Start/End: Original strand, 9115 - 9156
Alignment:
Q  36 aataggtcttggaagaacaaaagagagcaaatgaatcaacaa 77  Q
    |||||||  |||||||||||||||||||||||||||||||||    
T  9115 aataggttctggaagaacaaaagagagcaaatgaatcaacaa 9156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0132 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0132
Description:

Target: scaffold0132; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 39 - 120
Target Start/End: Original strand, 37784 - 37863
Alignment:
Q  39 aggtcttggaagaacaaaagagagcaaatgaatcaacaagaagagaaacctaaaagcatctcaagaaatctgcatctgaagt 120  Q
    ||||||| | |||||| |||| |||||| |||||||||| ||||||| |||||| |||||| ||||||||||| ||||||||    
T  37784 aggtcttcgtagaacagaagaaagcaaaagaatcaacaa-aagagaagcctaaa-gcatctgaagaaatctgcctctgaagt 37863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 142 - 219
Target Start/End: Original strand, 164760 - 164837
Alignment:
Q  142 agtgcatctgatgacgtcatcagaagcaaatccgtcagaagcaagaccttcagaagccatttgttcagaagctgtata 219  Q
    |||||| |||||||||||||||||||||| | | |||||| |||| |  |||||||| ||||  ||||||||||||||    
T  164760 agtgcacctgatgacgtcatcagaagcaagttcatcagaaccaagtctatcagaagctatttcctcagaagctgtata 164837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0604 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0604
Description:

Target: scaffold0604; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 14 - 72
Target Start/End: Complemental strand, 328 - 269
Alignment:
Q  14 cataggcaaagttgatcaacat-aataggtcttggaagaacaaaagagagcaaatgaatc 72  Q
    ||||||||||||| |||||  | |||||||||||||||||||| |||||||||| |||||    
T  328 cataggcaaagttaatcaatttcaataggtcttggaagaacaatagagagcaaaggaatc 269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0290 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0290
Description:

Target: scaffold0290; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 38 - 77
Target Start/End: Original strand, 18361 - 18400
Alignment:
Q  38 taggtcttggaagaacaaaagagagcaaatgaatcaacaa 77  Q
    ||||| ||||||||||||||||||||||| ||||||||||    
T  18361 taggttttggaagaacaaaagagagcaaaggaatcaacaa 18400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0154 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0154
Description:

Target: scaffold0154; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 14 - 72
Target Start/End: Complemental strand, 36119 - 36060
Alignment:
Q  14 cataggcaaagttgatcaacat-aataggtcttggaagaacaaaagagagcaaatgaatc 72  Q
    ||||||||||||| |||||  | |||||||||||||||||||| |||||||||| |||||    
T  36119 cataggcaaagttaatcaatttcaataggtcttggaagaacaatagagagcaaaggaatc 36060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0767 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0767
Description:

Target: scaffold0767; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 92 - 169
Target Start/End: Complemental strand, 5094 - 5013
Alignment:
Q  92 aagcatctcaagaaatctgcatctgaagtctaaagtgcgtctgaagccaaagtgcatc-----tgatgacgtcatcagaagca 169  Q
    |||||||| |||||| |||||||||||| ||||||||| ||||||||  |||||| ||     ||||||||||||||||||||    
T  5094 aagcatctgaagaaaactgcatctgaag-ctaaagtgcttctgaagctgaagtgcctctgaagtgatgacgtcatcagaagca 5013  T

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Target: scaffold0227 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0227
Description:

Target: scaffold0227; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 39 - 77
Target Start/End: Complemental strand, 23030 - 22992
Alignment:
Q  39 aggtcttggaagaacaaaagagagcaaatgaatcaacaa 77  Q
    ||||||||||||||||| |||||||||| ||||||||||    
T  23030 aggtcttggaagaacaatagagagcaaaagaatcaacaa 22992  T

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Target: scaffold0210 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0210
Description:

Target: scaffold0210; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 36 - 74
Target Start/End: Complemental strand, 2003 - 1965
Alignment:
Q  36 aataggtcttggaagaacaaaagagagcaaatgaatcaa 74  Q
    |||||||| |||||||||||||||||||||| |||||||    
T  2003 aataggtcctggaagaacaaaagagagcaaaggaatcaa 1965  T

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Target: scaffold0003 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 39 - 77
Target Start/End: Original strand, 89812 - 89850
Alignment:
Q  39 aggtcttggaagaacaaaagagagcaaatgaatcaacaa 77  Q
    ||||||||||||||||| |||||||||| ||||||||||    
T  89812 aggtcttggaagaacaatagagagcaaaggaatcaacaa 89850  T

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Target: scaffold0414 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0414
Description:

Target: scaffold0414; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 39 - 170
Target Start/End: Original strand, 6877 - 7014
Alignment:
Q  39 aggtcttggaagaacaaa-agagagcaaatgaatcaacaagaagagaaacctaaaagcatctcaagaaatctgcatctgaagtctaaagtgcgtctgaag 137  Q
    |||||||||||||||||| | ||||||||   |||||||| ||| ||| | ||||||| ||| |||||| ||||  |||||||  |||||||  ||||||    
T  6877 aggtcttggaagaacaaataaagagcaaacacatcaacaaaaagggaagcttaaaagcgtctgaagaaaactgctcctgaagttaaaagtgctcctgaag 6976  T
Q  138 ccaaagtgc-----atctgatgacgtcatcagaagcaa 170  Q
     ||||||||     |  |||||||||||||||||||||    
T  6977 acaaagtgctcctgaagtgatgacgtcatcagaagcaa 7014  T

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Target: scaffold0410 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0410
Description:

Target: scaffold0410; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 14 - 66
Target Start/End: Complemental strand, 7122 - 7069
Alignment:
Q  14 cataggcaaagttgatcaacat-aataggtcttggaagaacaaaagagagcaaa 66  Q
    ||||||||||||| |||||  | |||||||||||||||||||| ||||||||||    
T  7122 cataggcaaagttaatcaatttcaataggtcttggaagaacaatagagagcaaa 7069  T

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Target: scaffold0297 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0297
Description:

Target: scaffold0297; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 47 - 92
Target Start/End: Complemental strand, 17352 - 17307
Alignment:
Q  47 gaagaacaaaagagagcaaatgaatcaacaagaagagaaacctaaa 92  Q
    |||||||||||||||||||| |||||||||| |||| || ||||||    
T  17352 gaagaacaaaagagagcaaaggaatcaacaaaaagataagcctaaa 17307  T

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Target: scaffold0201 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0201
Description:

Target: scaffold0201; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 14 - 66
Target Start/End: Complemental strand, 7812 - 7759
Alignment:
Q  14 cataggcaaagttgatcaacat-aataggtcttggaagaacaaaagagagcaaa 66  Q
    ||||||||||||| |||||  | |||||||||||||||||||| ||||||||||    
T  7812 cataggcaaagttaatcaatttcaataggtcttggaagaacaatagagagcaaa 7759  T

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Target: scaffold0163 (Bit Score: 30; Significance: 0.0000001; HSPs: 2)
Name: scaffold0163
Description:

Target: scaffold0163; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 14 - 66
Target Start/End: Complemental strand, 30049 - 29996
Alignment:
Q  14 cataggcaaagttgatcaacat-aataggtcttggaagaacaaaagagagcaaa 66  Q
    ||||||||||||| |||||  | |||||||||||||||||||| ||||||||||    
T  30049 cataggcaaagttaatcaatttcaataggtcttggaagaacaatagagagcaaa 29996  T

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Target: scaffold0163; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 93 - 169
Target Start/End: Original strand, 36535 - 36616
Alignment:
Q  93 agcatctcaagaaatctgcatctgaagtctaaagtgcgtctgaagccaaagtgcatc-----tgatgacgtcatcagaagca 169  Q
    ||||||| |||||| |||| |||||||  |||||||| ||||||||  |||||||||     ||||||||||||||||||||    
T  36535 agcatctgaagaaaactgcgtctgaagcttaaagtgcttctgaagctgaagtgcatctgaagtgatgacgtcatcagaagca 36616  T

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Target: scaffold0023 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 48 - 77
Target Start/End: Complemental strand, 103917 - 103888
Alignment:
Q  48 aagaacaaaagagagcaaatgaatcaacaa 77  Q
    ||||||||||||||||||||||||||||||    
T  103917 aagaacaaaagagagcaaatgaatcaacaa 103888  T

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Target: scaffold0861 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0861
Description:

Target: scaffold0861; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 45 - 77
Target Start/End: Original strand, 4694 - 4726
Alignment:
Q  45 tggaagaacaaaagagagcaaatgaatcaacaa 77  Q
    |||||||||||||||||||||| ||||||||||    
T  4694 tggaagaacaaaagagagcaaaggaatcaacaa 4726  T

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Target: scaffold0774 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0774
Description:

Target: scaffold0774; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 36 - 72
Target Start/End: Original strand, 6061 - 6097
Alignment:
Q  36 aataggtcttggaagaacaaaagagagcaaatgaatc 72  Q
    |||||||||||||||||||| |||||||||| |||||    
T  6061 aataggtcttggaagaacaatagagagcaaaggaatc 6097  T

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Target: scaffold0084 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0084
Description:

Target: scaffold0084; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 45 - 77
Target Start/End: Complemental strand, 49681 - 49649
Alignment:
Q  45 tggaagaacaaaagagagcaaatgaatcaacaa 77  Q
    |||||||||||||||||||||| ||||||||||    
T  49681 tggaagaacaaaagagagcaaaggaatcaacaa 49649  T

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Target: scaffold0083 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0083
Description:

Target: scaffold0083; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 45 - 77
Target Start/End: Original strand, 25739 - 25771
Alignment:
Q  45 tggaagaacaaaagagagcaaatgaatcaacaa 77  Q
    |||||||||||||||||||||| ||||||||||    
T  25739 tggaagaacaaaagagagcaaaggaatcaacaa 25771  T

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Target: scaffold0026 (Bit Score: 29; Significance: 0.0000005; HSPs: 2)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 45 - 77
Target Start/End: Complemental strand, 8260 - 8228
Alignment:
Q  45 tggaagaacaaaagagagcaaatgaatcaacaa 77  Q
    |||||||||||||||||||||| ||||||||||    
T  8260 tggaagaacaaaagagagcaaaggaatcaacaa 8228  T

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Target: scaffold0026; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 45 - 77
Target Start/End: Complemental strand, 60379 - 60347
Alignment:
Q  45 tggaagaacaaaagagagcaaatgaatcaacaa 77  Q
    |||||||||||||||||||||| ||||||||||    
T  60379 tggaagaacaaaagagagcaaaggaatcaacaa 60347  T

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Target: scaffold0022 (Bit Score: 29; Significance: 0.0000005; HSPs: 2)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 45 - 77
Target Start/End: Complemental strand, 39775 - 39743
Alignment:
Q  45 tggaagaacaaaagagagcaaatgaatcaacaa 77  Q
    |||||||||||||||||||||| ||||||||||    
T  39775 tggaagaacaaaagagagcaaaggaatcaacaa 39743  T

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Target: scaffold0022; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 45 - 77
Target Start/End: Complemental strand, 137835 - 137803
Alignment:
Q  45 tggaagaacaaaagagagcaaatgaatcaacaa 77  Q
    |||||||||||||||||||||| ||||||||||    
T  137835 tggaagaacaaaagagagcaaaggaatcaacaa 137803  T

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Target: scaffold0004 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 45 - 77
Target Start/End: Original strand, 30618 - 30650
Alignment:
Q  45 tggaagaacaaaagagagcaaatgaatcaacaa 77  Q
    |||||||||||||||||||||| ||||||||||    
T  30618 tggaagaacaaaagagagcaaaggaatcaacaa 30650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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