View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15986_low_28 (Length: 324)
Name: NF15986_low_28
Description: NF15986
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15986_low_28 |
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Alignment Details
Target: chr7 (Bit Score: 277; Significance: 1e-155; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 277; E-Value: 1e-155
Query Start/End: Original strand, 4 - 308
Target Start/End: Original strand, 49075680 - 49075984
Alignment:
| Q |
4 |
caaaggcgggtcgaaggtaattgcggcgagaaacgagaatgtcgagaatgcggttaaggtgtttggttaaaggcttgatattgaattgaagcattgtgta |
103 |
Q |
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| T |
49075680 |
caaaagcgggtcgaaggtaattgcggtgagaaacgagaatgtcgagaatgcggttaaggtgtttggttaaaggcttgatattgaattgaagcattatgta |
49075779 |
T |
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| Q |
104 |
gaaggtgttgagggctttatcgggtaaattagcttcgccatagattttgattaagtaagaaaagagagtgggagtaatgggttgggatgattcggatttg |
203 |
Q |
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| T |
49075780 |
gaaggtgttgagggctttatcgggtaaattagcttcgccatagattttgattaagtaagaaaaaagagtgggagtaatgggttgggatgattcggatttg |
49075879 |
T |
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| Q |
204 |
agacgaagaagaagatcatcgaggagagagaagtgtttggagcggccaaatttgaggatgagaatgagataggtggagtaattgtggcgaaagttaggtt |
303 |
Q |
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|||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||| |
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| T |
49075880 |
agacgacgaagaagatcatcgaggagagagaagtgtttggagcgaccaaatttgaggatgagaatgagataggtggagtaattgtggcggaagttaggtt |
49075979 |
T |
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| Q |
304 |
gaaga |
308 |
Q |
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||||| |
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| T |
49075980 |
gaaga |
49075984 |
T |
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