View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15988_high_12 (Length: 314)
Name: NF15988_high_12
Description: NF15988
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15988_high_12 |
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Alignment Details
Target: chr4 (Bit Score: 286; Significance: 1e-160; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 286; E-Value: 1e-160
Query Start/End: Original strand, 17 - 306
Target Start/End: Original strand, 26537706 - 26537995
Alignment:
| Q |
17 |
aaaatatccatgatttgaaatgtccgacaagcccggcgaatgagtcatctcctgaacccgacactatggacattgatactttacatgagaataatcttgc |
116 |
Q |
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| T |
26537706 |
aaaatatccatgatttgaaatgtccgacaagcccggcgaatgagtcatctcctgaacccgacactatggacattgatactttacatgagaataatcttgc |
26537805 |
T |
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| Q |
117 |
aggtatatatgcacacagtgaaaggacataccatataatgatatccttaaagctcttaattatagaaacttcttaaatatacttagtttgattaatactt |
216 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
26537806 |
aggtatatatgcacacagtgaaaggacataccatataatgatatccttaaagctcttaattatagaaacttcttaaatatacttagtttgattaatactt |
26537905 |
T |
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| Q |
217 |
gcataatgtttaatatattccataatttcagttaagtttaatcgtagtttattgtttggaagatgacatggtctgcaagtttgatgatgt |
306 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |
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| T |
26537906 |
gcataatgtttaatatattccataatttcagttaagtttaatcgtagtttattgtttggaaaatgacatggtctgcaagtttgatgatgt |
26537995 |
T |
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