View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15992_low_12 (Length: 304)
Name: NF15992_low_12
Description: NF15992
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15992_low_12 |
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Alignment Details
Target: chr7 (Bit Score: 259; Significance: 1e-144; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 259; E-Value: 1e-144
Query Start/End: Original strand, 18 - 292
Target Start/End: Complemental strand, 45692376 - 45692102
Alignment:
| Q |
18 |
taagcatcagtagatgcatgcatgcatgtgtgcaaatacatgttggttttgatttgaagttaagaagcgtcttattggaacaacttaacgttcagttgta |
117 |
Q |
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| T |
45692376 |
taagcatcagtagatgcatgcatgcatgtgtgcaaatacatgttggttttgatttgaagttaagaagcgtcttattggaacaacttagcgttcagttgta |
45692277 |
T |
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| Q |
118 |
cttgcaggttatgacttatcgcggctaaattaaaagaatacagtctttcagaaatgagtcgaaattctcttgatctcatctctgcaaggtcagtctagac |
217 |
Q |
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||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |
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| T |
45692276 |
cttgcaggttatgacttattgcggctaaattaaaagaatacagtctttcagaaatgagtcgaaattctcttgatctcatctctgcaagttcagtctagac |
45692177 |
T |
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| Q |
218 |
tctacagtacaagaggaaacttaaaagtcattgaggttgggattccaattgttgacttgccaaattgcacaggtt |
292 |
Q |
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||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
45692176 |
tctacagtacaagaggatacttaaaagtcattgaggttgggattccaattgttgacttgccaaattgcacaggtt |
45692102 |
T |
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