View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15992_low_14 (Length: 284)
Name: NF15992_low_14
Description: NF15992
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15992_low_14 |
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Alignment Details
Target: chr8 (Bit Score: 165; Significance: 3e-88; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 165; E-Value: 3e-88
Query Start/End: Original strand, 1 - 279
Target Start/End: Original strand, 10103840 - 10104117
Alignment:
| Q |
1 |
aactcattttgaagagatgttgatttcaaagaataatatttccttacgacatttatttattaactactccatctattctaaaataagatcatgctactga |
100 |
Q |
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| T |
10103840 |
aactcattttgaagagatgttgatttcaaagaataatatttccttacgatatttatttattaactactccatctattctaaaataagatcatgctaccga |
10103939 |
T |
|
| Q |
101 |
ctgtaacactcgttcaagnnnnnnnnnnnnnnnnnncataaattttgttttgaaaagannnnnnnnnacaattattttagaatggatggagtattgtttt |
200 |
Q |
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| T |
10103940 |
ctgcgacacttgttcaagaaaaaaaaaacataaaa-cataaattttgttttgaaaagatttttttttacaattattttagaatggatggagtattgtttt |
10104038 |
T |
|
| Q |
201 |
taatccatgttaaacatttatacaatcaaaacaaaaattgttcaatatatgaaggttaagttgaagttgatgatgatgt |
279 |
Q |
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| T |
10104039 |
taatccatgttaaacatttatacaatcaaaagaaaaattgttcaatatatgaaggttaagttgaagttgatgaggatgt |
10104117 |
T |
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